Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048253.01 | MsG0580025670.01 | 0.806701 | 7.238738e-50 | 3.955446e-47 |
| MsG0080048621.01 | MsG0580025670.01 | -0.807100 | 5.959961e-50 | 3.290413e-47 |
| MsG0080048748.01 | MsG0580025670.01 | -0.802376 | 5.777288e-49 | 2.825686e-46 |
| MsG0080049069.01 | MsG0580025670.01 | -0.808667 | 2.767206e-50 | 1.591649e-47 |
| MsG0180000011.01 | MsG0580025670.01 | 0.864043 | 1.614952e-64 | 5.000153e-61 |
| MsG0180005339.01 | MsG0580025670.01 | -0.805256 | 1.457241e-49 | 7.673298e-47 |
| MsG0280006306.01 | MsG0580025670.01 | 0.821143 | 4.721715e-53 | 3.810109e-50 |
| MsG0280010793.01 | MsG0580025670.01 | 0.817220 | 3.691891e-52 | 2.672589e-49 |
| MsG0380012868.01 | MsG0580025670.01 | -0.813249 | 2.816979e-51 | 1.830022e-48 |
| MsG0380013467.01 | MsG0580025670.01 | -0.826072 | 3.316192e-54 | 3.077610e-51 |
| MsG0480022239.01 | MsG0580025670.01 | -0.833383 | 5.504318e-56 | 6.328866e-53 |
| MsG0480022240.01 | MsG0580025670.01 | -0.809508 | 1.827913e-50 | 1.075209e-47 |
| MsG0480022739.01 | MsG0580025670.01 | 0.809961 | 1.460951e-50 | 8.697249e-48 |
| MsG0580025280.01 | MsG0580025670.01 | -0.801961 | 7.032002e-49 | 3.402896e-46 |
| MsG0580025670.01 | MsG0580029914.01 | -0.802314 | 5.950611e-49 | 2.905884e-46 |
| MsG0580025670.01 | MsG0680030630.01 | 0.800307 | 1.532648e-48 | 7.113044e-46 |
| MsG0580025670.01 | MsG0780035960.01 | -0.804204 | 2.416850e-49 | 1.238622e-46 |
| MsG0580025670.01 | MsG0780037052.01 | 0.813741 | 2.194875e-51 | 1.445177e-48 |
| MsG0580025670.01 | MsG0780040881.01 | 0.802566 | 5.278736e-49 | 2.594148e-46 |
| MsG0580025670.01 | MsG0780041015.01 | 0.821889 | 3.176021e-53 | 2.617052e-50 |
| MsG0580025670.01 | MsG0880042086.01 | -0.801795 | 7.608399e-49 | 3.666418e-46 |
| MsG0580025670.01 | MsG0880043829.01 | -0.867424 | 1.382550e-65 | 4.824679e-62 |
| MsG0580025670.01 | MsG0880045943.01 | 0.831436 | 1.671582e-55 | 1.813773e-52 |
| MsG0580025670.01 | MsG0880045958.01 | 0.861466 | 1.005916e-63 | 2.849147e-60 |
| MsG0580025670.01 | MsG0880046334.01 | 0.800245 | 1.577621e-48 | 7.309892e-46 |
| MsG0380015847.01 | MsG0580025670.01 | 0.809361 | 1.965500e-50 | 1.151686e-47 |
| MsG0380015891.01 | MsG0580025670.01 | -0.817303 | 3.536381e-52 | 2.565819e-49 |
| MsG0380016337.01 | MsG0580025670.01 | 0.815152 | 1.070177e-51 | 7.320340e-49 |
| MsG0380017891.01 | MsG0580025670.01 | 0.826760 | 2.272486e-54 | 2.150801e-51 |
| MsG0480018426.01 | MsG0580025670.01 | -0.810398 | 1.175819e-50 | 7.079832e-48 |
| MsG0280007947.01 | MsG0580025670.01 | -0.816294 | 5.955536e-52 | 4.203672e-49 |
| MsG0280008098.01 | MsG0580025670.01 | -0.805107 | 1.566082e-49 | 8.215252e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 71 sgRNAs with CRISPR-Local
Find 76 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGCTGGGGTTGGTGGAGTT+GGG | 0.211464 | 5:-22385805 | MsG0580025670.01.T01:CDS |
| GCTGCAGGTGCTGGAGATTT+TGG | 0.218185 | 5:-22385827 | MsG0580025670.01.T01:CDS |
| GGTGCTGGGGTTGGTGGAGT+TGG | 0.250635 | 5:-22385806 | MsG0580025670.01.T01:CDS |
| GGCTGTGGGTGGAGTGGCTG+TGG | 0.294604 | 5:-22385858 | MsG0580025670.01.T01:CDS |
| TGCTGGGGTTGGTGGAGTTG+GGG | 0.296385 | 5:-22385804 | MsG0580025670.01.T01:CDS |
| GGTGGAGTGGCTGCAGGTGC+TGG | 0.307894 | 5:-22385836 | MsG0580025670.01.T01:CDS |
| GGACCACCGGGACCGGGTGC+TGG | 0.344564 | 5:-22386016 | MsG0580025670.01.T01:CDS |
| GGAGAGGAGGAAGAAGAATC+TGG | 0.365531 | 5:-22385992 | MsG0580025670.01.T01:CDS |
| GGGTGCTGGACCACCGGGAC+CGG | 0.366168 | 5:-22386023 | MsG0580025670.01.T01:CDS |
| GGTGGAGTTGGGGTTGCTGA+TGG | 0.374217 | 5:-22385794 | MsG0580025670.01.T01:CDS |
| CCACCGTTGGGACCGGGTGC+TGG | 0.386430 | 5:-22386037 | MsG0580025670.01.T01:CDS |
| CTCTGCTGCTTTCTTCGCCA+TGG | 0.396906 | 5:+22386132 | None:intergenic |
| GCTGTGGGTGGAGTGGCTGC+AGG | 0.406481 | 5:-22385842 | MsG0580025670.01.T01:CDS |
| GGGACCGGGTGCTGGACCAC+CGG | 0.415259 | 5:-22386029 | MsG0580025670.01.T01:CDS |
| GGTGCTGGAGGGGAAGTTGA+TGG | 0.429624 | 5:-22385944 | MsG0580025670.01.T01:CDS |
| TCTCCTCCAGCACCCGGTCC+CGG | 0.431458 | 5:+22386010 | None:intergenic |
| GGAGTTGGGGTTGCTGATGG+TGG | 0.434417 | 5:-22385791 | MsG0580025670.01.T01:CDS |
| AGCTGTTGGTGGAGTGGCTG+TGG | 0.434592 | 5:-22385873 | MsG0580025670.01.T01:CDS |
| GTTGCTGATGGTGGTTGTGT+TGG | 0.437158 | 5:-22385782 | MsG0580025670.01.T01:CDS |
| GCTGTGGGTGGAGTGGCTGT+GGG | 0.444542 | 5:-22385857 | MsG0580025670.01.T01:CDS |
| GGTTGTGTTGGTGCAGCACC+TGG | 0.446993 | 5:-22385770 | MsG0580025670.01.T01:CDS |
| GTGGGTGGAGTGGCTGTGGG+TGG | 0.452550 | 5:-22385854 | MsG0580025670.01.T01:CDS |
| TGGAGTGGCTGTGGGTGGAG+TGG | 0.458963 | 5:-22385849 | MsG0580025670.01.T01:CDS |
| GGAAGTTGATGGTGCAGGAG+TGG | 0.459049 | 5:-22385933 | MsG0580025670.01.T01:CDS |
| AGCACCACCACCGTTGGGAC+CGG | 0.467156 | 5:-22386044 | MsG0580025670.01.T01:CDS |
| GCAGTTGGTGGTGTTGCTGT+TGG | 0.475283 | 5:-22385902 | MsG0580025670.01.T01:CDS |
| TCCTCCTCTCCTCCAGCACC+CGG | 0.477704 | 5:+22386004 | None:intergenic |
| TGGAGTGGCTGTGGGTGGAG+TGG | 0.484799 | 5:-22385864 | MsG0580025670.01.T01:CDS |
| GTGGGAGCAGCTGCAGTTGG+TGG | 0.484852 | 5:-22385914 | MsG0580025670.01.T01:CDS |
| GGACCGGGTGCTGGACCACC+GGG | 0.491197 | 5:-22386028 | MsG0580025670.01.T01:CDS |
| GAAGTTGATGGTGCAGGAGT+GGG | 0.494475 | 5:-22385932 | MsG0580025670.01.T01:CDS |
| AATGCTGCTGAGGGTGAAGG+TGG | 0.499006 | 5:-22386073 | MsG0580025670.01.T01:CDS |
| CCCAACGGTGGTGGTGCTGA+TGG | 0.500063 | 5:+22386049 | None:intergenic |
| GCTGTTGGTGGAGTGGCTGT+GGG | 0.503159 | 5:-22385872 | MsG0580025670.01.T01:CDS |
| GGTGCTGGACCACCGGGACC+GGG | 0.503255 | 5:-22386022 | MsG0580025670.01.T01:CDS |
| CCATCAGCACCACCACCGTT+GGG | 0.510123 | 5:-22386049 | MsG0580025670.01.T01:CDS |
| CTCCTTCAACAAACCCATCA+TGG | 0.511324 | 5:+22386096 | None:intergenic |
| GAGAGCAGTTGCTGCCATGA+TGG | 0.511561 | 5:-22386110 | MsG0580025670.01.T01:CDS |
| TGCCATGATGGGTTTGTTGA+AGG | 0.512299 | 5:-22386098 | MsG0580025670.01.T01:CDS |
| GAAGTAGGTGTTGGTGCTGG+AGG | 0.514141 | 5:-22385956 | MsG0580025670.01.T01:CDS |
| GGAGTGGGTGCTTCAGAAGT+AGG | 0.515292 | 5:-22385971 | MsG0580025670.01.T01:CDS |
| GGAGTGGGAGCAGCTGCAGT+TGG | 0.520325 | 5:-22385917 | MsG0580025670.01.T01:CDS |
| GTTGGTGGTGTTGCTGTTGG+AGG | 0.520521 | 5:-22385899 | MsG0580025670.01.T01:CDS |
| GTTGGTGGAGTGGCTGTGGG+TGG | 0.521906 | 5:-22385869 | MsG0580025670.01.T01:CDS |
| CCACCGGGACCGGGTGCTGG+AGG | 0.523320 | 5:-22386013 | MsG0580025670.01.T01:CDS |
| AGAGCAGTTGCTGCCATGAT+GGG | 0.526905 | 5:-22386109 | MsG0580025670.01.T01:CDS |
| GCACCACCACCGTTGGGACC+GGG | 0.528708 | 5:-22386043 | MsG0580025670.01.T01:CDS |
| GCACCCGGTCCCAACGGTGG+TGG | 0.530310 | 5:+22386040 | None:intergenic |
| ACCGGGTGCTGGAGGAGAGG+AGG | 0.532438 | 5:-22386005 | MsG0580025670.01.T01:CDS |
| GGAGGGGAAGTTGATGGTGC+AGG | 0.532688 | 5:-22385938 | MsG0580025670.01.T01:CDS |
| GGAGGAAGAAGAATCTGGAG+TGG | 0.532792 | 5:-22385987 | MsG0580025670.01.T01:CDS |
| TCAGAAGTAGGTGTTGGTGC+TGG | 0.532872 | 5:-22385959 | MsG0580025670.01.T01:CDS |
| GGGACCGGGTGCTGGAGGAG+AGG | 0.539714 | 5:-22386008 | MsG0580025670.01.T01:CDS |
| GCCATCAGCACCACCACCGT+TGG | 0.546879 | 5:-22386050 | MsG0580025670.01.T01:CDS |
| AGTAGGTGTTGGTGCTGGAG+GGG | 0.555853 | 5:-22385954 | MsG0580025670.01.T01:CDS |
| AAGTAGGTGTTGGTGCTGGA+GGG | 0.566401 | 5:-22385955 | MsG0580025670.01.T01:CDS |
| GTTGGAGGAGTAGCTGTTGG+TGG | 0.571740 | 5:-22385884 | MsG0580025670.01.T01:CDS |
| GGTCCCGGTGGTCCAGCACC+CGG | 0.574417 | 5:+22386025 | None:intergenic |
| GGTCCAGCACCCGGTCCCAA+CGG | 0.575184 | 5:+22386034 | None:intergenic |
| AGGAGTAGCTGTTGGTGGAG+TGG | 0.587143 | 5:-22385879 | MsG0580025670.01.T01:CDS |
| GCTGTTGGAGGAGTAGCTGT+TGG | 0.592294 | 5:-22385887 | MsG0580025670.01.T01:CDS |
| CCAGCACCCGGTCCCAACGG+TGG | 0.598882 | 5:+22386037 | None:intergenic |
| GAGGAAGAAGAATCTGGAGT+GGG | 0.600175 | 5:-22385986 | MsG0580025670.01.T01:CDS |
| GAGAATGCTGCTGAGGGTGA+AGG | 0.610127 | 5:-22386076 | MsG0580025670.01.T01:CDS |
| GTTGAAGGAGAATGCTGCTG+AGG | 0.619792 | 5:-22386083 | MsG0580025670.01.T01:CDS |
| GGTGCTTCAGAAGTAGGTGT+TGG | 0.633700 | 5:-22385965 | MsG0580025670.01.T01:CDS |
| CCTCCAGCACCCGGTCCCGG+TGG | 0.634291 | 5:+22386013 | None:intergenic |
| TTGAAGGAGAATGCTGCTGA+GGG | 0.647476 | 5:-22386082 | MsG0580025670.01.T01:CDS |
| TGCTTGTGCAAAACAAGAGG+TGG | 0.656798 | 5:-22385747 | MsG0580025670.01.T01:CDS |
| TGGTGCTTGTGCAAAACAAG+AGG | 0.690722 | 5:-22385750 | MsG0580025670.01.T01:CDS |
| ATGCTGCTGAGGGTGAAGGT+GGG | 0.701564 | 5:-22386072 | MsG0580025670.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | GTACAAGTTTTTCTCATCTT+AGG | + | Chr5:22386123-22386142 | None:intergenic | 30.0% |
| CTCCTTCAACAAACCCATCA+TGG | + | Chr5:22385743-22385762 | None:intergenic | 45.0% | |
| TGCTTGTGCAAAACAAGAGG+TGG | - | Chr5:22386089-22386108 | MsG0580025670.01.T01:CDS | 45.0% | |
| TGGTGCTTGTGCAAAACAAG+AGG | - | Chr5:22386086-22386105 | MsG0580025670.01.T01:CDS | 45.0% | |
| TTGAAGGAGAATGCTGCTGA+GGG | - | Chr5:22385754-22385773 | MsG0580025670.01.T01:CDS | 45.0% | |
| ! | GAGGAAGAAGAATCTGGAGT+GGG | - | Chr5:22385850-22385869 | MsG0580025670.01.T01:CDS | 45.0% |
| !! | TGCCATGATGGGTTTGTTGA+AGG | - | Chr5:22385738-22385757 | MsG0580025670.01.T01:CDS | 45.0% |
| !!! | TCTTGTTTTGCACAAGCACC+AGG | + | Chr5:22386087-22386106 | None:intergenic | 45.0% |
| AGAGCAGTTGCTGCCATGAT+GGG | - | Chr5:22385727-22385746 | MsG0580025670.01.T01:CDS | 50.0% | |
| GGAGAGGAGGAAGAAGAATC+TGG | - | Chr5:22385844-22385863 | MsG0580025670.01.T01:CDS | 50.0% | |
| GGAGGAAGAAGAATCTGGAG+TGG | - | Chr5:22385849-22385868 | MsG0580025670.01.T01:CDS | 50.0% | |
| GGTGCTTCAGAAGTAGGTGT+TGG | - | Chr5:22385871-22385890 | MsG0580025670.01.T01:CDS | 50.0% | |
| GTTGAAGGAGAATGCTGCTG+AGG | - | Chr5:22385753-22385772 | MsG0580025670.01.T01:CDS | 50.0% | |
| !! | AAGTAGGTGTTGGTGCTGGA+GGG | - | Chr5:22385881-22385900 | MsG0580025670.01.T01:CDS | 50.0% |
| !! | GAAGTTGATGGTGCAGGAGT+GGG | - | Chr5:22385904-22385923 | MsG0580025670.01.T01:CDS | 50.0% |
| !! | GTTGCTGATGGTGGTTGTGT+TGG | - | Chr5:22386054-22386073 | MsG0580025670.01.T01:CDS | 50.0% |
| !! | TCAGAAGTAGGTGTTGGTGC+TGG | - | Chr5:22385877-22385896 | MsG0580025670.01.T01:CDS | 50.0% |
| !!! | GTGCTGGAGATTTTGGTGCT+GGG | - | Chr5:22386016-22386035 | MsG0580025670.01.T01:CDS | 50.0% |
| !!! | TGCTGGAGATTTTGGTGCTG+GGG | - | Chr5:22386017-22386036 | MsG0580025670.01.T01:CDS | 50.0% |
| AATGCTGCTGAGGGTGAAGG+TGG | - | Chr5:22385763-22385782 | MsG0580025670.01.T01:CDS | 55.0% | |
| ATGCTGCTGAGGGTGAAGGT+GGG | - | Chr5:22385764-22385783 | MsG0580025670.01.T01:CDS | 55.0% | |
| GAGAATGCTGCTGAGGGTGA+AGG | - | Chr5:22385760-22385779 | MsG0580025670.01.T01:CDS | 55.0% | |
| GAGAGCAGTTGCTGCCATGA+TGG | - | Chr5:22385726-22385745 | MsG0580025670.01.T01:CDS | 55.0% | |
| GCTGTTGGAGGAGTAGCTGT+TGG | - | Chr5:22385949-22385968 | MsG0580025670.01.T01:CDS | 55.0% | |
| GGAGTGGGTGCTTCAGAAGT+AGG | - | Chr5:22385865-22385884 | MsG0580025670.01.T01:CDS | 55.0% | |
| GTTGGAGGAGTAGCTGTTGG+TGG | - | Chr5:22385952-22385971 | MsG0580025670.01.T01:CDS | 55.0% | |
| ! | AGGAGTAGCTGTTGGTGGAG+TGG | - | Chr5:22385957-22385976 | MsG0580025670.01.T01:CDS | 55.0% |
| !! | AGTAGGTGTTGGTGCTGGAG+GGG | - | Chr5:22385882-22385901 | MsG0580025670.01.T01:CDS | 55.0% |
| !! | GAAGTAGGTGTTGGTGCTGG+AGG | - | Chr5:22385880-22385899 | MsG0580025670.01.T01:CDS | 55.0% |
| !! | GCAGTTGGTGGTGTTGCTGT+TGG | - | Chr5:22385934-22385953 | MsG0580025670.01.T01:CDS | 55.0% |
| !! | GGAAGTTGATGGTGCAGGAG+TGG | - | Chr5:22385903-22385922 | MsG0580025670.01.T01:CDS | 55.0% |
| !! | GGTGCTGGAGATTTTGGTGC+TGG | - | Chr5:22386015-22386034 | MsG0580025670.01.T01:CDS | 55.0% |
| !! | GTTGGTGGTGTTGCTGTTGG+AGG | - | Chr5:22385937-22385956 | MsG0580025670.01.T01:CDS | 55.0% |
| !!! | GATTTTGGTGCTGGGGTTGG+TGG | - | Chr5:22386024-22386043 | MsG0580025670.01.T01:CDS | 55.0% |
| !!! | GCTGCAGGTGCTGGAGATTT+TGG | - | Chr5:22386009-22386028 | MsG0580025670.01.T01:CDS | 55.0% |
| !!! | GGAGATTTTGGTGCTGGGGT+TGG | - | Chr5:22386021-22386040 | MsG0580025670.01.T01:CDS | 55.0% |
| CCATCAGCACCACCACCGTT+GGG | - | Chr5:22385787-22385806 | MsG0580025670.01.T01:CDS | 60.0% | |
| GGAGTTGGGGTTGCTGATGG+TGG | - | Chr5:22386045-22386064 | MsG0580025670.01.T01:CDS | 60.0% | |
| GGTGGAGTTGGGGTTGCTGA+TGG | - | Chr5:22386042-22386061 | MsG0580025670.01.T01:CDS | 60.0% | |
| ! | AGCTGTTGGTGGAGTGGCTG+TGG | - | Chr5:22385963-22385982 | MsG0580025670.01.T01:CDS | 60.0% |
| ! | GCTGTTGGTGGAGTGGCTGT+GGG | - | Chr5:22385964-22385983 | MsG0580025670.01.T01:CDS | 60.0% |
| ! | GGTGCTGGAGGGGAAGTTGA+TGG | - | Chr5:22385892-22385911 | MsG0580025670.01.T01:CDS | 60.0% |
| ! | GGTTGTGTTGGTGCAGCACC+TGG | - | Chr5:22386066-22386085 | MsG0580025670.01.T01:CDS | 60.0% |
| !! | GGAGGGGAAGTTGATGGTGC+AGG | - | Chr5:22385898-22385917 | MsG0580025670.01.T01:CDS | 60.0% |
| !! | GTGCTGGGGTTGGTGGAGTT+GGG | - | Chr5:22386031-22386050 | MsG0580025670.01.T01:CDS | 60.0% |
| !! | TGCTGGGGTTGGTGGAGTTG+GGG | - | Chr5:22386032-22386051 | MsG0580025670.01.T01:CDS | 60.0% |
| AGCACCACCACCGTTGGGAC+CGG | - | Chr5:22385792-22385811 | MsG0580025670.01.T01:CDS | 65.0% | |
| GCCATCAGCACCACCACCGT+TGG | - | Chr5:22385786-22385805 | MsG0580025670.01.T01:CDS | 65.0% | |
| GCTGTGGGTGGAGTGGCTGT+GGG | - | Chr5:22385979-22385998 | MsG0580025670.01.T01:CDS | 65.0% | |
| GGAGTGGGAGCAGCTGCAGT+TGG | - | Chr5:22385919-22385938 | MsG0580025670.01.T01:CDS | 65.0% | |
| GTGGGAGCAGCTGCAGTTGG+TGG | - | Chr5:22385922-22385941 | MsG0580025670.01.T01:CDS | 65.0% | |
| TCCTCCTCTCCTCCAGCACC+CGG | + | Chr5:22385835-22385854 | None:intergenic | 65.0% | |
| TGGAGTGGCTGTGGGTGGAG+TGG | - | Chr5:22385972-22385991 | MsG0580025670.01.T01:CDS | 65.0% | |
| ! | CCCAACGGTGGTGGTGCTGA+TGG | + | Chr5:22385790-22385809 | None:intergenic | 65.0% |
| ! | GTTGGTGGAGTGGCTGTGGG+TGG | - | Chr5:22385967-22385986 | MsG0580025670.01.T01:CDS | 65.0% |
| !! | GGTGCTGGGGTTGGTGGAGT+TGG | - | Chr5:22386030-22386049 | MsG0580025670.01.T01:CDS | 65.0% |
| GCACCACCACCGTTGGGACC+GGG | - | Chr5:22385793-22385812 | MsG0580025670.01.T01:CDS | 70.0% | |
| GCTGTGGGTGGAGTGGCTGC+AGG | - | Chr5:22385994-22386013 | MsG0580025670.01.T01:CDS | 70.0% | |
| GGCTGTGGGTGGAGTGGCTG+TGG | - | Chr5:22385978-22385997 | MsG0580025670.01.T01:CDS | 70.0% | |
| GGTCCAGCACCCGGTCCCAA+CGG | + | Chr5:22385805-22385824 | None:intergenic | 70.0% | |
| GGTGGAGTGGCTGCAGGTGC+TGG | - | Chr5:22386000-22386019 | MsG0580025670.01.T01:CDS | 70.0% | |
| GTGGGTGGAGTGGCTGTGGG+TGG | - | Chr5:22385982-22386001 | MsG0580025670.01.T01:CDS | 70.0% | |
| TCTCCTCCAGCACCCGGTCC+CGG | + | Chr5:22385829-22385848 | None:intergenic | 70.0% | |
| !! | ACCGGGTGCTGGAGGAGAGG+AGG | - | Chr5:22385831-22385850 | MsG0580025670.01.T01:CDS | 70.0% |
| CCACCGTTGGGACCGGGTGC+TGG | - | Chr5:22385799-22385818 | MsG0580025670.01.T01:CDS | 75.0% | |
| CCAGCACCCGGTCCCAACGG+TGG | + | Chr5:22385802-22385821 | None:intergenic | 75.0% | |
| GCACCCGGTCCCAACGGTGG+TGG | + | Chr5:22385799-22385818 | None:intergenic | 75.0% | |
| GGTCCCGGTGGTCCAGCACC+CGG | + | Chr5:22385814-22385833 | None:intergenic | 75.0% | |
| ! | GGTGCTGGACCACCGGGACC+GGG | - | Chr5:22385814-22385833 | MsG0580025670.01.T01:CDS | 75.0% |
| !! | GGACCGGGTGCTGGACCACC+GGG | - | Chr5:22385808-22385827 | MsG0580025670.01.T01:CDS | 75.0% |
| !! | GGGACCGGGTGCTGGACCAC+CGG | - | Chr5:22385807-22385826 | MsG0580025670.01.T01:CDS | 75.0% |
| !! | GGGACCGGGTGCTGGAGGAG+AGG | - | Chr5:22385828-22385847 | MsG0580025670.01.T01:CDS | 75.0% |
| !! | GGGTGCTGGACCACCGGGAC+CGG | - | Chr5:22385813-22385832 | MsG0580025670.01.T01:CDS | 75.0% |
| ! | CCTCCAGCACCCGGTCCCGG+TGG | + | Chr5:22385826-22385845 | None:intergenic | 80.0% |
| ! | GGACCACCGGGACCGGGTGC+TGG | - | Chr5:22385820-22385839 | MsG0580025670.01.T01:CDS | 80.0% |
| !!! | CCACCGGGACCGGGTGCTGG+AGG | - | Chr5:22385823-22385842 | MsG0580025670.01.T01:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 22385706 | 22386152 | 22385706 | ID=MsG0580025670.01;Name=MsG0580025670.01 |
| Chr5 | mRNA | 22385706 | 22386152 | 22385706 | ID=MsG0580025670.01.T01;Parent=MsG0580025670.01;Name=MsG0580025670.01.T01;_AED=0.35;_eAED=0.35;_QI=0|-1|0|1|-1|1|1|0|148 |
| Chr5 | exon | 22385706 | 22386152 | 22385706 | ID=MsG0580025670.01.T01:exon:9372;Parent=MsG0580025670.01.T01 |
| Chr5 | CDS | 22385706 | 22386152 | 22385706 | ID=MsG0580025670.01.T01:cds;Parent=MsG0580025670.01.T01 |
| Gene Sequence |
| Protein sequence |
