Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010834.01.T01 | XP_039686739.1 | 82.602 | 684 | 78 | 7 | 1 | 666 | 1 | 661 | 0 | 1033 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010834.01.T01 | Q67ZB3 | 28.025 | 157 | 113 | 0 | 509 | 665 | 300 | 456 | 8.33E-13 | 75.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010834.01.T01 | A0A072VCF9 | 82.602 | 684 | 78 | 7 | 1 | 666 | 1 | 661 | 0.0 | 1033 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000470.01 | MsG0280010834.01 | 0.815589 | 8.556163e-52 | 5.923606e-49 |
| MsG0180004264.01 | MsG0280010834.01 | 0.807669 | 4.514884e-50 | 2.529800e-47 |
| MsG0280006324.01 | MsG0280010834.01 | 0.800952 | 1.132287e-48 | 5.341554e-46 |
| MsG0280006325.01 | MsG0280010834.01 | 0.810039 | 1.405345e-50 | 8.383437e-48 |
| MsG0280010834.01 | MsG0380011609.01 | 0.809768 | 1.607340e-50 | 9.520706e-48 |
| MsG0280010834.01 | MsG0380012009.01 | 0.802025 | 6.822185e-49 | 3.306849e-46 |
| MsG0280010834.01 | MsG0380014251.01 | 0.804665 | 1.937070e-49 | 1.004627e-46 |
| MsG0280010834.01 | MsG0480021274.01 | 0.800935 | 1.141012e-48 | 5.380477e-46 |
| MsG0280010834.01 | MsG0480022259.01 | 0.840557 | 8.095972e-58 | 1.157461e-54 |
| MsG0280010834.01 | MsG0480022262.01 | 0.823761 | 1.163826e-53 | 1.011405e-50 |
| MsG0280010834.01 | MsG0480022615.01 | -0.801452 | 8.946409e-49 | 4.273941e-46 |
| MsG0280010834.01 | MsG0480023015.01 | 0.803456 | 3.456080e-49 | 1.737554e-46 |
| MsG0280010834.01 | MsG0580027922.01 | 0.806198 | 9.240421e-50 | 4.985035e-47 |
| MsG0280010834.01 | MsG0580028990.01 | 0.805627 | 1.218131e-49 | 6.476064e-47 |
| MsG0280010834.01 | MsG0680035444.01 | 0.804325 | 2.280858e-49 | 1.172593e-46 |
| MsG0280007955.01 | MsG0280010834.01 | 0.810661 | 1.031585e-50 | 6.255537e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010834.01.T01 | MTR_2g091245 | 82.602 | 684 | 78 | 7 | 1 | 666 | 1 | 661 | 0.0 | 1033 |
| MsG0280010834.01.T01 | MTR_6g045183 | 47.073 | 803 | 252 | 16 | 1 | 666 | 2 | 768 | 0.0 | 577 |
| MsG0280010834.01.T01 | MTR_2g091105 | 50.607 | 741 | 224 | 18 | 7 | 665 | 7 | 687 | 0.0 | 551 |
| MsG0280010834.01.T01 | MTR_2g091240 | 60.388 | 515 | 158 | 6 | 197 | 665 | 76 | 590 | 1.12e-179 | 523 |
| MsG0280010834.01.T01 | MTR_2g091090 | 46.657 | 718 | 264 | 18 | 1 | 665 | 2 | 653 | 3.22e-162 | 481 |
| MsG0280010834.01.T01 | MTR_2g091260 | 53.817 | 524 | 193 | 9 | 187 | 666 | 359 | 877 | 9.45e-147 | 448 |
| MsG0280010834.01.T01 | MTR_2g091260 | 37.288 | 472 | 153 | 14 | 1 | 379 | 1 | 422 | 4.36e-56 | 205 |
| MsG0280010834.01.T01 | MTR_5g078510 | 48.496 | 565 | 232 | 11 | 139 | 665 | 2 | 545 | 8.03e-143 | 427 |
| MsG0280010834.01.T01 | MTR_5g078510 | 44.828 | 87 | 48 | 0 | 264 | 350 | 1 | 87 | 9.18e-11 | 65.5 |
| MsG0280010834.01.T01 | MTR_2g091030 | 49.837 | 612 | 234 | 9 | 1 | 563 | 1 | 588 | 4.97e-141 | 424 |
| MsG0280010834.01.T01 | MTR_2g091370 | 38.308 | 851 | 324 | 14 | 1 | 664 | 1 | 837 | 5.44e-138 | 425 |
| MsG0280010834.01.T01 | MTR_2g091335 | 47.460 | 630 | 238 | 16 | 1 | 563 | 1 | 604 | 2.03e-136 | 413 |
| MsG0280010834.01.T01 | MTR_2g091250 | 52.542 | 531 | 192 | 9 | 189 | 666 | 772 | 1295 | 1.09e-133 | 424 |
| MsG0280010834.01.T01 | MTR_2g091250 | 38.725 | 408 | 171 | 13 | 5 | 392 | 18 | 366 | 1.27e-45 | 175 |
| MsG0280010834.01.T01 | MTR_2g091250 | 37.069 | 232 | 127 | 5 | 169 | 391 | 561 | 782 | 1.70e-16 | 84.3 |
| MsG0280010834.01.T01 | MTR_2g091250 | 37.423 | 163 | 92 | 1 | 254 | 406 | 509 | 671 | 3.68e-15 | 80.1 |
| MsG0280010834.01.T01 | MTR_2g091250 | 37.241 | 145 | 87 | 1 | 238 | 382 | 521 | 661 | 9.07e-15 | 79.0 |
| MsG0280010834.01.T01 | MTR_2g091250 | 36.596 | 235 | 117 | 6 | 162 | 382 | 333 | 549 | 6.87e-13 | 72.8 |
| MsG0280010834.01.T01 | MTR_2g091285 | 47.405 | 578 | 232 | 9 | 23 | 563 | 47 | 589 | 3.43e-133 | 404 |
| MsG0280010834.01.T01 | MTR_2g104190 | 46.242 | 612 | 197 | 12 | 36 | 608 | 103 | 621 | 7.53e-125 | 384 |
| MsG0280010834.01.T01 | MTR_2g091290 | 37.125 | 800 | 324 | 14 | 26 | 650 | 26 | 821 | 8.36e-122 | 382 |
| MsG0280010834.01.T01 | MTR_2g091110 | 46.477 | 596 | 239 | 10 | 125 | 665 | 731 | 1301 | 1.35e-118 | 384 |
| MsG0280010834.01.T01 | MTR_2g091110 | 52.812 | 409 | 142 | 8 | 21 | 392 | 8 | 402 | 4.62e-97 | 325 |
| MsG0280010834.01.T01 | MTR_2g091110 | 33.333 | 249 | 133 | 5 | 162 | 408 | 597 | 814 | 3.38e-19 | 93.2 |
| MsG0280010834.01.T01 | MTR_2g091110 | 32.673 | 303 | 144 | 9 | 127 | 392 | 365 | 644 | 2.26e-17 | 87.4 |
| MsG0280010834.01.T01 | MTR_2g091110 | 37.952 | 166 | 82 | 1 | 238 | 382 | 336 | 501 | 2.68e-13 | 73.9 |
| MsG0280010834.01.T01 | MTR_2g091315 | 60.490 | 367 | 114 | 6 | 1 | 347 | 1 | 356 | 9.21e-117 | 361 |
| MsG0280010834.01.T01 | MTR_2g091315 | 37.956 | 137 | 76 | 2 | 238 | 369 | 429 | 561 | 2.12e-12 | 70.5 |
| MsG0280010834.01.T01 | MTR_2g091315 | 30.314 | 287 | 161 | 9 | 126 | 392 | 275 | 542 | 4.75e-12 | 69.3 |
| MsG0280010834.01.T01 | MTR_5g038810 | 44.241 | 547 | 240 | 11 | 44 | 583 | 14 | 502 | 2.40e-115 | 360 |
| MsG0280010834.01.T01 | MTR_2g010420 | 42.484 | 612 | 276 | 14 | 115 | 665 | 243 | 839 | 2.13e-113 | 360 |
| MsG0280010834.01.T01 | MTR_2g010420 | 38.400 | 375 | 184 | 10 | 26 | 391 | 25 | 361 | 6.13e-41 | 160 |
| MsG0280010834.01.T01 | MTR_2g091080 | 54.167 | 408 | 160 | 6 | 21 | 408 | 8 | 408 | 1.60e-109 | 348 |
| MsG0280010834.01.T01 | MTR_2g091080 | 45.619 | 388 | 193 | 4 | 186 | 566 | 385 | 761 | 1.49e-71 | 247 |
| MsG0280010834.01.T01 | MTR_2g093010 | 55.065 | 385 | 127 | 7 | 1 | 347 | 1 | 377 | 6.42e-104 | 336 |
| MsG0280010834.01.T01 | MTR_2g093010 | 37.943 | 564 | 247 | 13 | 125 | 594 | 295 | 849 | 7.67e-76 | 260 |
| MsG0280010834.01.T01 | MTR_2g093010 | 55.065 | 385 | 127 | 7 | 1 | 347 | 2 | 378 | 6.42e-104 | 336 |
| MsG0280010834.01.T01 | MTR_2g093010 | 37.943 | 564 | 247 | 13 | 125 | 594 | 296 | 850 | 7.95e-76 | 260 |
| MsG0280010834.01.T01 | MTR_2g091015 | 51.111 | 405 | 135 | 6 | 231 | 581 | 491 | 886 | 2.13e-103 | 335 |
| MsG0280010834.01.T01 | MTR_2g091015 | 42.943 | 333 | 144 | 7 | 95 | 382 | 107 | 438 | 3.49e-50 | 188 |
| MsG0280010834.01.T01 | MTR_3g110385 | 39.062 | 640 | 253 | 14 | 125 | 666 | 213 | 813 | 4.46e-94 | 309 |
| MsG0280010834.01.T01 | MTR_3g110385 | 32.964 | 361 | 160 | 9 | 59 | 382 | 32 | 347 | 1.61e-26 | 115 |
| MsG0280010834.01.T01 | MTR_2g091025 | 43.084 | 441 | 216 | 5 | 215 | 624 | 140 | 576 | 1.34e-93 | 301 |
| MsG0280010834.01.T01 | MTR_2g091010 | 42.431 | 436 | 188 | 9 | 1 | 382 | 1 | 427 | 3.32e-74 | 253 |
| MsG0280010834.01.T01 | MTR_2g091010 | 55.340 | 103 | 46 | 0 | 562 | 664 | 634 | 736 | 4.48e-25 | 111 |
| MsG0280010834.01.T01 | MTR_2g091010 | 29.483 | 329 | 184 | 4 | 149 | 440 | 318 | 635 | 2.89e-17 | 86.3 |
| MsG0280010834.01.T01 | MTR_2g091325 | 39.565 | 460 | 206 | 10 | 1 | 392 | 2 | 457 | 2.59e-71 | 242 |
| MsG0280010834.01.T01 | MTR_2g091325 | 35.127 | 316 | 155 | 9 | 125 | 418 | 292 | 579 | 1.29e-25 | 112 |
| MsG0280010834.01.T01 | MTR_2g010420 | 39.216 | 510 | 234 | 14 | 115 | 563 | 243 | 737 | 3.36e-71 | 245 |
| MsG0280010834.01.T01 | MTR_2g010420 | 38.400 | 375 | 184 | 10 | 26 | 391 | 25 | 361 | 1.26e-40 | 159 |
| MsG0280010834.01.T01 | MTR_2g090980 | 49.632 | 272 | 130 | 3 | 330 | 600 | 289 | 554 | 6.51e-66 | 227 |
| MsG0280010834.01.T01 | MTR_2g091040 | 38.200 | 500 | 167 | 15 | 1 | 442 | 2 | 417 | 1.05e-64 | 223 |
| MsG0280010834.01.T01 | MTR_2g091040 | 62.500 | 104 | 38 | 1 | 563 | 665 | 422 | 525 | 8.83e-31 | 127 |
| MsG0280010834.01.T01 | MTR_2g091070 | 60.541 | 185 | 73 | 0 | 440 | 624 | 25 | 209 | 7.35e-62 | 205 |
| MsG0280010834.01.T01 | MTR_2g103620 | 43.343 | 353 | 148 | 9 | 217 | 563 | 72 | 378 | 1.23e-56 | 197 |
| MsG0280010834.01.T01 | MTR_2g103620 | 48.673 | 113 | 45 | 4 | 47 | 148 | 4 | 114 | 9.79e-13 | 70.9 |
| MsG0280010834.01.T01 | MTR_2g091280 | 39.770 | 435 | 199 | 11 | 5 | 382 | 6 | 434 | 5.68e-56 | 203 |
| MsG0280010834.01.T01 | MTR_2g091280 | 39.519 | 291 | 144 | 9 | 125 | 393 | 433 | 713 | 2.98e-27 | 118 |
| MsG0280010834.01.T01 | MTR_2g091280 | 34.100 | 261 | 135 | 8 | 169 | 410 | 334 | 576 | 8.33e-14 | 75.5 |
| MsG0280010834.01.T01 | MTR_7g056313 | 39.637 | 386 | 181 | 8 | 7 | 392 | 8 | 341 | 3.21e-54 | 190 |
| MsG0280010834.01.T01 | MTR_2g091005 | 41.908 | 346 | 164 | 8 | 42 | 363 | 53 | 385 | 3.83e-51 | 187 |
| MsG0280010834.01.T01 | MTR_2g091005 | 42.157 | 102 | 38 | 1 | 565 | 666 | 530 | 610 | 7.23e-12 | 68.9 |
| MsG0280010834.01.T01 | MTR_2g103640 | 44.012 | 334 | 145 | 9 | 217 | 536 | 48 | 353 | 7.84e-50 | 177 |
| MsG0280010834.01.T01 | MTR_2g103640 | 30.916 | 262 | 131 | 8 | 59 | 309 | 11 | 233 | 2.17e-12 | 69.3 |
| MsG0280010834.01.T01 | MTR_2g091330 | 35.106 | 470 | 170 | 11 | 1 | 388 | 1 | 417 | 1.91e-44 | 169 |
| MsG0280010834.01.T01 | MTR_2g091330 | 30.699 | 329 | 155 | 6 | 125 | 394 | 279 | 593 | 3.73e-16 | 82.8 |
| MsG0280010834.01.T01 | MTR_5g078500 | 36.188 | 362 | 155 | 11 | 1 | 345 | 1 | 303 | 4.44e-44 | 160 |
| MsG0280010834.01.T01 | MTR_8g467200 | 34.086 | 443 | 209 | 13 | 231 | 661 | 32 | 403 | 1.47e-43 | 164 |
| MsG0280010834.01.T01 | MTR_4g046660 | 44.403 | 268 | 129 | 7 | 404 | 661 | 419 | 676 | 2.66e-38 | 152 |
| MsG0280010834.01.T01 | MTR_8g107320 | 39.367 | 221 | 99 | 4 | 343 | 563 | 24 | 209 | 1.78e-32 | 125 |
| MsG0280010834.01.T01 | MTR_7g056317 | 71.429 | 98 | 27 | 1 | 480 | 577 | 1 | 97 | 5.96e-27 | 105 |
| MsG0280010834.01.T01 | MTR_4g084930 | 53.608 | 97 | 44 | 1 | 565 | 661 | 37 | 132 | 5.64e-24 | 99.0 |
| MsG0280010834.01.T01 | MTR_4g084920 | 34.076 | 314 | 153 | 12 | 211 | 501 | 12 | 294 | 4.88e-23 | 100 |
| MsG0280010834.01.T01 | MTR_4g084920 | 38.579 | 197 | 102 | 4 | 122 | 316 | 14 | 193 | 7.56e-20 | 91.7 |
| MsG0280010834.01.T01 | MTR_8g106540 | 31.142 | 289 | 141 | 6 | 275 | 563 | 54 | 284 | 1.03e-21 | 96.7 |
| MsG0280010834.01.T01 | MTR_4g095080 | 26.136 | 440 | 265 | 15 | 268 | 661 | 13 | 438 | 2.12e-18 | 89.4 |
| MsG0280010834.01.T01 | MTR_2g090640 | 34.632 | 231 | 96 | 4 | 224 | 399 | 101 | 331 | 1.67e-17 | 86.7 |
| MsG0280010834.01.T01 | MTR_2g090640 | 33.453 | 278 | 136 | 4 | 164 | 392 | 101 | 378 | 9.85e-17 | 84.3 |
| MsG0280010834.01.T01 | MTR_2g091360 | 41.333 | 150 | 73 | 3 | 189 | 338 | 22 | 156 | 4.66e-17 | 83.2 |
| MsG0280010834.01.T01 | MTR_2g091360 | 31.579 | 228 | 115 | 7 | 231 | 456 | 25 | 213 | 1.89e-11 | 66.2 |
| MsG0280010834.01.T01 | MTR_3g056070 | 28.272 | 191 | 132 | 2 | 473 | 662 | 172 | 358 | 3.89e-12 | 69.7 |
| MsG0280010834.01.T01 | MTR_5g094400 | 27.128 | 188 | 132 | 2 | 474 | 660 | 198 | 381 | 9.94e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280010834.01.T01 | AT5G48385 | 28.025 | 157 | 113 | 0 | 509 | 665 | 300 | 456 | 8.49e-14 | 75.1 |
| MsG0280010834.01.T01 | AT1G31814 | 25.926 | 189 | 133 | 4 | 465 | 649 | 153 | 338 | 6.43e-12 | 68.9 |
Find 96 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAAATCAGTTTGGCATTT+TGG | 0.038762 | 2:+75573761 | None:intergenic |
| CTCTTCAGTATCTCTCTTTA+TGG | 0.145269 | 2:+75576828 | None:intergenic |
| AACTGTTCAACAATGCATTT+TGG | 0.163705 | 2:-75573572 | MsG0280010834.01.T01:CDS |
| GAAGATTCTTTGGCGGTTAT+TGG | 0.178591 | 2:-75574980 | MsG0280010834.01.T01:CDS |
| CTTCTTACACAGTGGATTAA+TGG | 0.178750 | 2:+75575147 | None:intergenic |
| TGATTTAAAGCTGAATAAAT+TGG | 0.182242 | 2:-75576107 | MsG0280010834.01.T01:CDS |
| TTTCGATGAAGATGAAATTT+TGG | 0.207548 | 2:-75574918 | MsG0280010834.01.T01:CDS |
| GATACAATGAACAAATTAAT+TGG | 0.217654 | 2:-75576496 | MsG0280010834.01.T01:CDS |
| AGATCAAGAAATTGCTAGTT+TGG | 0.267521 | 2:-75573596 | MsG0280010834.01.T01:CDS |
| AGAGAATAATGAAGATTCTT+TGG | 0.307674 | 2:-75574990 | MsG0280010834.01.T01:CDS |
| TTCTTACACAGTGGATTAAT+GGG | 0.334842 | 2:+75575148 | None:intergenic |
| TGTATCAAGCTCTATCTCTT+TGG | 0.338319 | 2:+75576513 | None:intergenic |
| GTTCCTCTTCCTTCCTTTCA+CGG | 0.342021 | 2:+75576584 | None:intergenic |
| GAACTTGGAAGGACGAATAA+AGG | 0.361370 | 2:-75576356 | MsG0280010834.01.T01:CDS |
| TGAATGTACTTTGGAACTTA+AGG | 0.374070 | 2:-75576536 | MsG0280010834.01.T01:CDS |
| AATTTATTCAGCTTTAAATC+AGG | 0.384079 | 2:+75576109 | None:intergenic |
| AGAAACATGCAAGGAGGAAT+CGG | 0.392956 | 2:+75577029 | None:intergenic |
| CTCACACAATCTTCAATCTT+CGG | 0.401450 | 2:+75575058 | None:intergenic |
| TTAAGTTTGGGAACATTTAG+TGG | 0.403322 | 2:-75577108 | MsG0280010834.01.T01:CDS |
| GGAAGAGCAGCTCTATTTGA+TGG | 0.412227 | 2:-75576689 | MsG0280010834.01.T01:CDS |
| TATGGAGATGTTTCAGACTC+TGG | 0.412809 | 2:-75574861 | MsG0280010834.01.T01:CDS |
| GAGGTTCTTACAAAGGAGAT+TGG | 0.415846 | 2:-75573532 | MsG0280010834.01.T01:CDS |
| CAGCTTTAAATCAGGATCCT+TGG | 0.428557 | 2:+75576117 | None:intergenic |
| ACTAGCAATTTCTTGATCTC+TGG | 0.437247 | 2:+75573600 | None:intergenic |
| GAAACATGCAAGGAGGAATC+GGG | 0.437891 | 2:+75577030 | None:intergenic |
| AACCAACTCCGTTGAAATCA+AGG | 0.446102 | 2:-75573722 | MsG0280010834.01.T01:intron |
| ACTGTTCACACAAATCAGTT+TGG | 0.453371 | 2:+75573753 | None:intergenic |
| CTTGAGCTACAAGCACATAA+AGG | 0.454488 | 2:-75573499 | MsG0280010834.01.T01:CDS |
| AACCTTGATTTCAACGGAGT+TGG | 0.457408 | 2:+75573720 | None:intergenic |
| GAAGGAGTTTCAATTAAAAG+AGG | 0.459023 | 2:-75576296 | MsG0280010834.01.T01:CDS |
| ATGAAAGATCATCTTCATCT+TGG | 0.459468 | 2:+75576968 | None:intergenic |
| TATAGTTTACCTGTCAACTT+AGG | 0.471727 | 2:+75576067 | None:intergenic |
| ATGGAGATGTTTCAGACTCT+GGG | 0.479493 | 2:-75574860 | MsG0280010834.01.T01:CDS |
| ATTCAGTTGTGCATATAACT+TGG | 0.485633 | 2:-75573824 | MsG0280010834.01.T01:CDS |
| TAGTGCTGAAATGAAGGAAT+TGG | 0.486844 | 2:-75576434 | MsG0280010834.01.T01:CDS |
| AATTATTTGAGGAATGCAAA+TGG | 0.488538 | 2:-75576882 | MsG0280010834.01.T01:CDS |
| TAAATTGGATGGACAAATGA+AGG | 0.494056 | 2:-75576092 | MsG0280010834.01.T01:CDS |
| CATTAATCCACTGTGTAAGA+AGG | 0.495309 | 2:-75575146 | MsG0280010834.01.T01:CDS |
| TTAAAAGAGGAGGAATTTGA+AGG | 0.496577 | 2:-75576283 | MsG0280010834.01.T01:CDS |
| GCAATTCGAGGGACAAATGA+AGG | 0.498239 | 2:-75576314 | MsG0280010834.01.T01:CDS |
| ATTAACGTGGAGCAAGAATC+CGG | 0.499253 | 2:-75576025 | MsG0280010834.01.T01:intron |
| AGTCATTGATAACATTGATA+AGG | 0.503822 | 2:-75576608 | MsG0280010834.01.T01:CDS |
| GAATGGTAGTGCTGAAATGA+AGG | 0.509360 | 2:-75576440 | MsG0280010834.01.T01:CDS |
| ATAATTCTTCTAACAGCGTA+AGG | 0.510690 | 2:+75576899 | None:intergenic |
| TTAGAGTCTGAAAAGGAGAA+TGG | 0.512323 | 2:-75576457 | MsG0280010834.01.T01:CDS |
| TGAGTCAGAGAAGAAGAACT+TGG | 0.512987 | 2:-75576371 | MsG0280010834.01.T01:CDS |
| TATCAAGGAGTTTGTAGTGA+AGG | 0.513397 | 2:-75576710 | MsG0280010834.01.T01:CDS |
| GGAATTTGAAGGCAGAGTGA+AGG | 0.514651 | 2:-75576272 | MsG0280010834.01.T01:CDS |
| ATACGCAGTTGCATCTTACA+TGG | 0.515839 | 2:-75575305 | MsG0280010834.01.T01:intron |
| TCATCATGACCACAAAACTT+TGG | 0.518656 | 2:+75577189 | None:intergenic |
| TTCTGTTAAGATTAAGAAGA+GGG | 0.522097 | 2:-75577070 | MsG0280010834.01.T01:CDS |
| TGGTGGAACAAGTTTGCAGT+TGG | 0.527919 | 2:-75575260 | MsG0280010834.01.T01:CDS |
| CAATTAAGTCATACCATTGG+TGG | 0.529146 | 2:-75575277 | MsG0280010834.01.T01:CDS |
| ATGAAGGAGCCTAAGTTGAC+AGG | 0.531788 | 2:-75576076 | MsG0280010834.01.T01:CDS |
| GGAGTTTCAATTAAAAGAGG+AGG | 0.531791 | 2:-75576293 | MsG0280010834.01.T01:CDS |
| TTAAAGCTGAATAAATTGGA+TGG | 0.533909 | 2:-75576103 | MsG0280010834.01.T01:CDS |
| GAATAATGAAGATTCTTTGG+CGG | 0.535139 | 2:-75574987 | MsG0280010834.01.T01:CDS |
| TCAATGAAGAATCAACTTGA+GGG | 0.542352 | 2:-75576409 | MsG0280010834.01.T01:CDS |
| GGAGCTCGAATCAAAGAAGA+AGG | 0.548520 | 2:-75576209 | MsG0280010834.01.T01:CDS |
| GCTGTTAGAAGAATTATTTG+AGG | 0.549884 | 2:-75576893 | MsG0280010834.01.T01:CDS |
| AAGAAAAGGTGAATGAGCTC+AGG | 0.551482 | 2:-75576168 | MsG0280010834.01.T01:CDS |
| GTCAATGAAGAATCAACTTG+AGG | 0.555619 | 2:-75576410 | MsG0280010834.01.T01:CDS |
| GGAAATGAAATCAAAGGTGG+AGG | 0.559109 | 2:-75576251 | MsG0280010834.01.T01:CDS |
| AGAGCGCAAGCTAGAGCTCA+AGG | 0.560715 | 2:-75576653 | MsG0280010834.01.T01:CDS |
| TGCTCAGCACAAGATAGCTA+TGG | 0.565711 | 2:-75574879 | MsG0280010834.01.T01:CDS |
| CTGCAAACTTGTTCCACCAA+TGG | 0.566622 | 2:+75575264 | None:intergenic |
| GGATTGCAAACTACAGTCTG+AGG | 0.567148 | 2:-75573551 | MsG0280010834.01.T01:CDS |
| GCTGTTTGAAAGACAAGCCA+AGG | 0.569057 | 2:-75576134 | MsG0280010834.01.T01:CDS |
| GGAACTCGAAGATCAAGTTA+AGG | 0.570629 | 2:-75576230 | MsG0280010834.01.T01:CDS |
| TGAGGAAAACTTTGTGACAA+TGG | 0.572677 | 2:+75577135 | None:intergenic |
| TGATAAGGACCGTGAAAGGA+AGG | 0.575886 | 2:-75576593 | MsG0280010834.01.T01:CDS |
| GAAGGAAATGAAATCAAAGG+TGG | 0.578454 | 2:-75576254 | MsG0280010834.01.T01:CDS |
| CAGAAGAACCTTGATTTCAA+CGG | 0.584171 | 2:+75573714 | None:intergenic |
| ATCAAGAGAGAAGCAATTCG+AGG | 0.585327 | 2:-75576326 | MsG0280010834.01.T01:CDS |
| TGAAGTTTGTGACAAAGTGC+AGG | 0.585398 | 2:-75576749 | MsG0280010834.01.T01:CDS |
| GGACCGTGAAAGGAAGGAAG+AGG | 0.585661 | 2:-75576587 | MsG0280010834.01.T01:CDS |
| TCAGAGAAGAAGAACTTGGA+AGG | 0.587930 | 2:-75576367 | MsG0280010834.01.T01:CDS |
| GTTCCCAAACTTAAAATCTG+AGG | 0.588610 | 2:+75577117 | None:intergenic |
| ATTAATCCACTGTGTAAGAA+GGG | 0.589689 | 2:-75575145 | MsG0280010834.01.T01:CDS |
| GATCAATTAAGTCATACCAT+TGG | 0.594274 | 2:-75575280 | MsG0280010834.01.T01:CDS |
| TTTCTTAACAGAAACATGCA+AGG | 0.602293 | 2:+75577020 | None:intergenic |
| TTGTTGAGAATCTTATCAAG+AGG | 0.606243 | 2:-75573870 | MsG0280010834.01.T01:CDS |
| ACATTGATAAGGACCGTGAA+AGG | 0.607617 | 2:-75576597 | MsG0280010834.01.T01:CDS |
| TCAAGAGAGAAGCAATTCGA+GGG | 0.616023 | 2:-75576325 | MsG0280010834.01.T01:CDS |
| TTGTGTGAGAGAAGAAGCAT+TGG | 0.622866 | 2:-75575044 | MsG0280010834.01.T01:CDS |
| AGTGAAGGAAATGAAATCAA+AGG | 0.623538 | 2:-75576257 | MsG0280010834.01.T01:CDS |
| CTTCTGTTAAGATTAAGAAG+AGG | 0.632509 | 2:-75577071 | MsG0280010834.01.T01:CDS |
| TTGTCTCCCTTCTTACACAG+TGG | 0.649739 | 2:+75575139 | None:intergenic |
| CGTAAGGTCTTTCTTCAGTG+AGG | 0.654872 | 2:+75576915 | None:intergenic |
| ACAGTCTGAGGTTCTTACAA+AGG | 0.655255 | 2:-75573539 | MsG0280010834.01.T01:CDS |
| CTGTCACTACATCATGATCA+CGG | 0.663982 | 2:-75576991 | MsG0280010834.01.T01:CDS |
| ACTGTTGCAGTTGAGTCACA+TGG | 0.677260 | 2:-75575223 | MsG0280010834.01.T01:CDS |
| GTTGTTCTAGCAGAAAGATG+CGG | 0.685845 | 2:+75575095 | None:intergenic |
| CTTAACAGAAACATGCAAGG+AGG | 0.699023 | 2:+75577023 | None:intergenic |
| AAACATGCAAGGAGGAATCG+GGG | 0.701101 | 2:+75577031 | None:intergenic |
| ATTAAGAAAATATATTAACG+TGG | 0.763472 | 2:-75576038 | MsG0280010834.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGCTTAATTATAATATTA+TGG | - | Chr2:75575014-75575033 | MsG0280010834.01.T01:CDS | 10.0% |
| !! | ATTAAGAAAATATATTAACG+TGG | - | Chr2:75574667-75574686 | MsG0280010834.01.T01:intron | 15.0% |
| !! | AAATTGAACTGATATCTAAT+TGG | - | Chr2:75576564-75576583 | MsG0280010834.01.T01:CDS | 20.0% |
| !! | AAGATTATGATATTAGTTGT+TGG | - | Chr2:75576537-75576556 | MsG0280010834.01.T01:CDS | 20.0% |
| !! | ATATGAATAAGAACATTTAC+CGG | + | Chr2:75574702-75574721 | None:intergenic | 20.0% |
| !! | ATCAAAGCATAAAAGATAAA+AGG | + | Chr2:75575932-75575951 | None:intergenic | 20.0% |
| !! | GATACAATGAACAAATTAAT+TGG | - | Chr2:75574209-75574228 | MsG0280010834.01.T01:intron | 20.0% |
| !!! | AATTTATTCAGCTTTAAATC+AGG | + | Chr2:75574599-75574618 | None:intergenic | 20.0% |
| !!! | AGATTTTTGTTGTTGTTAAT+TGG | - | Chr2:75576771-75576790 | MsG0280010834.01.T01:CDS | 20.0% |
| !!! | AGTTATCCTATTTTCTTAAA+AGG | + | Chr2:75576477-75576496 | None:intergenic | 20.0% |
| !!! | ATGAATCCTTTTAAGAAAAT+AGG | - | Chr2:75576468-75576487 | MsG0280010834.01.T01:CDS | 20.0% |
| !!! | GATTTCATTGATTAATAAAC+AGG | + | Chr2:75575169-75575188 | None:intergenic | 20.0% |
| !!! | TATTTTTTTGAGAGAAACAT+GGG | + | Chr2:75576224-75576243 | None:intergenic | 20.0% |
| !!! | TGATTTAAAGCTGAATAAAT+TGG | - | Chr2:75574598-75574617 | MsG0280010834.01.T01:intron | 20.0% |
| !!! | TGTCTCTTCTATTTTTTAAA+TGG | - | Chr2:75576712-75576731 | MsG0280010834.01.T01:CDS | 20.0% |
| !!! | TGTTTTGATATGAATAAATG+TGG | + | Chr2:75576289-75576308 | None:intergenic | 20.0% |
| !!! | TTATTTTTTTGAGAGAAACA+TGG | + | Chr2:75576225-75576244 | None:intergenic | 20.0% |
| !!! | TTTACCCATTTTATCATTTA+TGG | - | Chr2:75576096-75576115 | MsG0280010834.01.T01:CDS | 20.0% |
| !!! | TTTTTCAAGTATATTGCAAA+TGG | - | Chr2:75575076-75575095 | MsG0280010834.01.T01:CDS | 20.0% |
| ! | AAAAACTGAAGAATGTATCA+AGG | - | Chr2:75573980-75573999 | MsG0280010834.01.T01:intron | 25.0% |
| ! | AAAAATCGATGAATGTACTT+TGG | - | Chr2:75574160-75574179 | MsG0280010834.01.T01:intron | 25.0% |
| ! | AATTATTTGAGGAATGCAAA+TGG | - | Chr2:75573823-75573842 | MsG0280010834.01.T01:CDS | 25.0% |
| ! | AGAAAAATTAGAGTCTGAAA+AGG | - | Chr2:75574241-75574260 | MsG0280010834.01.T01:intron | 25.0% |
| ! | AGAGAATAATGAAGATTCTT+TGG | - | Chr2:75575715-75575734 | MsG0280010834.01.T01:intron | 25.0% |
| ! | AGAGATTCATAAAATGTTCA+AGG | + | Chr2:75574957-75574976 | None:intergenic | 25.0% |
| ! | ATCCACCATAAATGATAAAA+TGG | + | Chr2:75576104-75576123 | None:intergenic | 25.0% |
| ! | ATCTCCTAGATTGAAATATA+TGG | + | Chr2:75575272-75575291 | None:intergenic | 25.0% |
| ! | ATTACTATGTATTTGAACTC+AGG | - | Chr2:75577076-75577095 | MsG0280010834.01.T01:CDS | 25.0% |
| ! | GAGATTCATAAAATGTTCAA+GGG | + | Chr2:75574956-75574975 | None:intergenic | 25.0% |
| ! | TAAGAAAATAGGATAACTCT+TGG | - | Chr2:75576479-75576498 | MsG0280010834.01.T01:CDS | 25.0% |
| ! | TCCACCATAAATGATAAAAT+GGG | + | Chr2:75576103-75576122 | None:intergenic | 25.0% |
| ! | TCTCCTAGATTGAAATATAT+GGG | + | Chr2:75575271-75575290 | None:intergenic | 25.0% |
| ! | TTAAAGCTGAATAAATTGGA+TGG | - | Chr2:75574602-75574621 | MsG0280010834.01.T01:intron | 25.0% |
| ! | TTCTGTTAAGATTAAGAAGA+GGG | - | Chr2:75573635-75573654 | MsG0280010834.01.T01:intron | 25.0% |
| !! | AGTCATTGATAACATTGATA+AGG | - | Chr2:75574097-75574116 | MsG0280010834.01.T01:intron | 25.0% |
| !! | CAGTAAATGATAGTGAAAAT+AGG | + | Chr2:75575337-75575356 | None:intergenic | 25.0% |
| !! | CTATTTTCACTATCATTTAC+TGG | - | Chr2:75575335-75575354 | MsG0280010834.01.T01:intron | 25.0% |
| !! | TTTCGATGAAGATGAAATTT+TGG | - | Chr2:75575787-75575806 | MsG0280010834.01.T01:intron | 25.0% |
| !!! | AAATGCCATTTTTCAATTTG+TGG | - | Chr2:75576410-75576429 | MsG0280010834.01.T01:CDS | 25.0% |
| !!! | TTTCCTCAGATTTTAAGTTT+GGG | - | Chr2:75573585-75573604 | MsG0280010834.01.T01:CDS | 25.0% |
| !!! | TTTTCCTCAGATTTTAAGTT+TGG | - | Chr2:75573584-75573603 | MsG0280010834.01.T01:CDS | 25.0% |
| AAAAAAATCCACCCTATAGT+GGG | + | Chr2:75576079-75576098 | None:intergenic | 30.0% | |
| AAGCGATCTGTTAAAGAAAA+TGG | - | Chr2:75576440-75576459 | MsG0280010834.01.T01:CDS | 30.0% | |
| AAGTATATTGCAAATGGTGT+AGG | - | Chr2:75575082-75575101 | MsG0280010834.01.T01:CDS | 30.0% | |
| AGATCAAGAAATTGCTAGTT+TGG | - | Chr2:75577109-75577128 | MsG0280010834.01.T01:CDS | 30.0% | |
| AGTGAAGGAAATGAAATCAA+AGG | - | Chr2:75574448-75574467 | MsG0280010834.01.T01:intron | 30.0% | |
| ATAATTCTTCTAACAGCGTA+AGG | + | Chr2:75573809-75573828 | None:intergenic | 30.0% | |
| ATCCTAACTGTAGATAAGAA+TGG | + | Chr2:75576013-75576032 | None:intergenic | 30.0% | |
| ATGAAAGATCATCTTCATCT+TGG | + | Chr2:75573740-75573759 | None:intergenic | 30.0% | |
| ATGTATTTGAACTCAGGATA+AGG | - | Chr2:75577082-75577101 | MsG0280010834.01.T01:CDS | 30.0% | |
| ATGTTAATTCAGAACTGCTT+TGG | - | Chr2:75575890-75575909 | MsG0280010834.01.T01:intron | 30.0% | |
| ATTAATCCACTGTGTAAGAA+GGG | - | Chr2:75575560-75575579 | MsG0280010834.01.T01:intron | 30.0% | |
| ATTCAGTTGTGCATATAACT+TGG | - | Chr2:75576881-75576900 | MsG0280010834.01.T01:CDS | 30.0% | |
| ATTCATAACCAGTGTGAAAA+TGG | + | Chr2:75577051-75577070 | None:intergenic | 30.0% | |
| CAACAAAAATCTAAGCAGAT+TGG | + | Chr2:75576763-75576782 | None:intergenic | 30.0% | |
| CTTCTGTTAAGATTAAGAAG+AGG | - | Chr2:75573634-75573653 | MsG0280010834.01.T01:intron | 30.0% | |
| GAAGGAGTTTCAATTAAAAG+AGG | - | Chr2:75574409-75574428 | MsG0280010834.01.T01:intron | 30.0% | |
| GAATAATGAAGATTCTTTGG+CGG | - | Chr2:75575718-75575737 | MsG0280010834.01.T01:intron | 30.0% | |
| GATCAATTAAGTCATACCAT+TGG | - | Chr2:75575425-75575444 | MsG0280010834.01.T01:intron | 30.0% | |
| GCTGTTAGAAGAATTATTTG+AGG | - | Chr2:75573812-75573831 | MsG0280010834.01.T01:CDS | 30.0% | |
| TAAAAAAATCCACCCTATAG+TGG | + | Chr2:75576080-75576099 | None:intergenic | 30.0% | |
| TAAATTGGATGGACAAATGA+AGG | - | Chr2:75574613-75574632 | MsG0280010834.01.T01:intron | 30.0% | |
| TATAGTTTACCTGTCAACTT+AGG | + | Chr2:75574641-75574660 | None:intergenic | 30.0% | |
| TCAATGAAGAATCAACTTGA+GGG | - | Chr2:75574296-75574315 | MsG0280010834.01.T01:intron | 30.0% | |
| TCACCCATATATTTCAATCT+AGG | - | Chr2:75575265-75575284 | MsG0280010834.01.T01:CDS | 30.0% | |
| TGAAAAACGTCTGAAAGAAA+AGG | - | Chr2:75574523-75574542 | MsG0280010834.01.T01:intron | 30.0% | |
| TGTCAATTCTCTCTAAACAA+AGG | + | Chr2:75576618-75576637 | None:intergenic | 30.0% | |
| TTAAAAGAGGAGGAATTTGA+AGG | - | Chr2:75574422-75574441 | MsG0280010834.01.T01:intron | 30.0% | |
| TTAAGTTTGGGAACATTTAG+TGG | - | Chr2:75573597-75573616 | MsG0280010834.01.T01:CDS | 30.0% | |
| TTATGGCTATTCATGATCAA+AGG | - | Chr2:75576040-75576059 | MsG0280010834.01.T01:CDS | 30.0% | |
| TTGCTCCACAAATTGAAAAA+TGG | + | Chr2:75576418-75576437 | None:intergenic | 30.0% | |
| TTGTTGAGAATCTTATCAAG+AGG | - | Chr2:75576835-75576854 | MsG0280010834.01.T01:CDS | 30.0% | |
| TTTAGAGAGAATTGACATCT+TGG | - | Chr2:75576621-75576640 | MsG0280010834.01.T01:CDS | 30.0% | |
| TTTCTTAACAGAAACATGCA+AGG | + | Chr2:75573688-75573707 | None:intergenic | 30.0% | |
| ! | AACTGTTCAACAATGCATTT+TGG | - | Chr2:75577133-75577152 | MsG0280010834.01.T01:CDS | 30.0% |
| ! | ACCCATTTTATCATTTATGG+TGG | - | Chr2:75576099-75576118 | MsG0280010834.01.T01:CDS | 30.0% |
| ! | ACTGACATGTCTAGAATAAT+AGG | + | Chr2:75576331-75576350 | None:intergenic | 30.0% |
| ! | GGTTTTGCAAATAAAGTTTC+TGG | - | Chr2:75575866-75575885 | MsG0280010834.01.T01:intron | 30.0% |
| ! | GTCTAGAATAATAGGTGATT+TGG | + | Chr2:75576323-75576342 | None:intergenic | 30.0% |
| !! | GGTTCTTCTGTTTTTCTTAT+TGG | - | Chr2:75577004-75577023 | MsG0280010834.01.T01:CDS | 30.0% |
| !! | TGAATGTACTTTGGAACTTA+AGG | - | Chr2:75574169-75574188 | MsG0280010834.01.T01:intron | 30.0% |
| !! | TTCTTACACAGTGGATTAAT+GGG | + | Chr2:75575560-75575579 | None:intergenic | 30.0% |
| !!! | AATTTTGGAGCTTTTTGCAT+TGG | - | Chr2:75575802-75575821 | MsG0280010834.01.T01:intron | 30.0% |
| !!! | ACTCATGCGTTTTTTATTCA+TGG | - | Chr2:75574989-75575008 | MsG0280010834.01.T01:CDS | 30.0% |
| AAAAGCAGTGAAGGAAAACA+TGG | + | Chr2:75576258-75576277 | None:intergenic | 35.0% | |
| AAAGCAGTGAAGGAAAACAT+GGG | + | Chr2:75576257-75576276 | None:intergenic | 35.0% | |
| AACATCCTGACAAACATTGA+GGG | - | Chr2:75575108-75575127 | MsG0280010834.01.T01:CDS | 35.0% | |
| AACTGTAGATAAGAATGGCA+TGG | + | Chr2:75576008-75576027 | None:intergenic | 35.0% | |
| AATGGCATGGAAAGTAACAA+TGG | + | Chr2:75575995-75576014 | None:intergenic | 35.0% | |
| ACTAGCAATTTCTTGATCTC+TGG | + | Chr2:75577108-75577127 | None:intergenic | 35.0% | |
| ACTGTTCACACAAATCAGTT+TGG | + | Chr2:75576955-75576974 | None:intergenic | 35.0% | |
| ATGAAATCAAACACTGTCTC+TGG | - | Chr2:75575181-75575200 | MsG0280010834.01.T01:CDS | 35.0% | |
| CAATTAAGTCATACCATTGG+TGG | - | Chr2:75575428-75575447 | MsG0280010834.01.T01:intron | 35.0% | |
| CAGAAGAACCTTGATTTCAA+CGG | + | Chr2:75576994-75577013 | None:intergenic | 35.0% | |
| CATTAATCCACTGTGTAAGA+AGG | - | Chr2:75575559-75575578 | MsG0280010834.01.T01:intron | 35.0% | |
| CTAGAAACAGTTGCACTAAT+AGG | + | Chr2:75575145-75575164 | None:intergenic | 35.0% | |
| CTCACACAATCTTCAATCTT+CGG | + | Chr2:75575650-75575669 | None:intergenic | 35.0% | |
| CTCTTCAGTATCTCTCTTTA+TGG | + | Chr2:75573880-75573899 | None:intergenic | 35.0% | |
| CTGATTATTAGCCCACTATA+GGG | - | Chr2:75576065-75576084 | MsG0280010834.01.T01:CDS | 35.0% | |
| GAAGGAAATGAAATCAAAGG+TGG | - | Chr2:75574451-75574470 | MsG0280010834.01.T01:intron | 35.0% | |
| GATTCTCAACAAAATCTGCA+AGG | + | Chr2:75576827-75576846 | None:intergenic | 35.0% | |
| GGAGTTTCAATTAAAAGAGG+AGG | - | Chr2:75574412-75574431 | MsG0280010834.01.T01:intron | 35.0% | |
| GTCAATGAAGAATCAACTTG+AGG | - | Chr2:75574295-75574314 | MsG0280010834.01.T01:intron | 35.0% | |
| GTTCCCAAACTTAAAATCTG+AGG | + | Chr2:75573591-75573610 | None:intergenic | 35.0% | |
| TATCAAGGAGTTTGTAGTGA+AGG | - | Chr2:75573995-75574014 | MsG0280010834.01.T01:intron | 35.0% | |
| TATCTACAGTTAGGATGAGA+TGG | - | Chr2:75576017-75576036 | MsG0280010834.01.T01:intron | 35.0% | |
| TCATCATGACCACAAAACTT+TGG | + | Chr2:75573519-75573538 | None:intergenic | 35.0% | |
| TGAGGAAAACTTTGTGACAA+TGG | + | Chr2:75573573-75573592 | None:intergenic | 35.0% | |
| TGCCATTCTTATCTACAGTT+AGG | - | Chr2:75576008-75576027 | MsG0280010834.01.T01:intron | 35.0% | |
| TGGCGCTTCTATAAATATGA+GGG | - | Chr2:75575355-75575374 | MsG0280010834.01.T01:intron | 35.0% | |
| TGTATCAAGCTCTATCTCTT+TGG | + | Chr2:75574195-75574214 | None:intergenic | 35.0% | |
| TGTGCATGTGATATGAAAAC+TGG | + | Chr2:75574863-75574882 | None:intergenic | 35.0% | |
| TTAGAGTCTGAAAAGGAGAA+TGG | - | Chr2:75574248-75574267 | MsG0280010834.01.T01:intron | 35.0% | |
| ! | CAAACATTCCATTTTCACAC+TGG | - | Chr2:75577040-75577059 | MsG0280010834.01.T01:CDS | 35.0% |
| ! | CACAAATCAGTTTGGCATTT+TGG | + | Chr2:75576947-75576966 | None:intergenic | 35.0% |
| ! | TACATATTTTCTGCCTGTTC+TGG | - | Chr2:75576794-75576813 | MsG0280010834.01.T01:CDS | 35.0% |
| ! | TAGTGCTGAAATGAAGGAAT+TGG | - | Chr2:75574271-75574290 | MsG0280010834.01.T01:intron | 35.0% |
| ! | TCTGATATGCCAAAGTTTTG+TGG | - | Chr2:75573507-75573526 | MsG0280010834.01.T01:CDS | 35.0% |
| !! | CTTCTTACACAGTGGATTAA+TGG | + | Chr2:75575561-75575580 | None:intergenic | 35.0% |
| !! | GTTTTCCTTCACTGCTTTTA+TGG | - | Chr2:75576259-75576278 | MsG0280010834.01.T01:CDS | 35.0% |
| !! | TGACATCTTGGTGTTAATCT+TGG | - | Chr2:75576633-75576652 | MsG0280010834.01.T01:CDS | 35.0% |
| !! | TTATGGTGGATGTAGTCTTT+AGG | - | Chr2:75576113-75576132 | MsG0280010834.01.T01:CDS | 35.0% |
| AACCAACTCCGTTGAAATCA+AGG | - | Chr2:75576983-75577002 | MsG0280010834.01.T01:CDS | 40.0% | |
| AACCTTGATTTCAACGGAGT+TGG | + | Chr2:75576988-75577007 | None:intergenic | 40.0% | |
| AAGAAAAGGTGAATGAGCTC+AGG | - | Chr2:75574537-75574556 | MsG0280010834.01.T01:intron | 40.0% | |
| AATGCCAACTGACATTCTCT+TGG | + | Chr2:75576369-75576388 | None:intergenic | 40.0% | |
| ACAACCAAGAGAATGTCAGT+TGG | - | Chr2:75576362-75576381 | MsG0280010834.01.T01:CDS | 40.0% | |
| ACATCCTGACAAACATTGAG+GGG | - | Chr2:75575109-75575128 | MsG0280010834.01.T01:CDS | 40.0% | |
| ACATTGATAAGGACCGTGAA+AGG | - | Chr2:75574108-75574127 | MsG0280010834.01.T01:intron | 40.0% | |
| AGAAACATGCAAGGAGGAAT+CGG | + | Chr2:75573679-75573698 | None:intergenic | 40.0% | |
| ATACGCAGTTGCATCTTACA+TGG | - | Chr2:75575400-75575419 | MsG0280010834.01.T01:intron | 40.0% | |
| ATCAAGAGAGAAGCAATTCG+AGG | - | Chr2:75574379-75574398 | MsG0280010834.01.T01:intron | 40.0% | |
| ATGGAGATGTTTCAGACTCT+GGG | - | Chr2:75575845-75575864 | MsG0280010834.01.T01:intron | 40.0% | |
| ATTAACGTGGAGCAAGAATC+CGG | - | Chr2:75574680-75574699 | MsG0280010834.01.T01:intron | 40.0% | |
| ATTATTAGCCCACTATAGGG+TGG | - | Chr2:75576068-75576087 | MsG0280010834.01.T01:CDS | 40.0% | |
| CAACATCCTGACAAACATTG+AGG | - | Chr2:75575107-75575126 | MsG0280010834.01.T01:CDS | 40.0% | |
| CAGTTAGGATGAGATGGTTA+TGG | - | Chr2:75576023-75576042 | MsG0280010834.01.T01:intron | 40.0% | |
| CTGGCGCTTCTATAAATATG+AGG | - | Chr2:75575354-75575373 | MsG0280010834.01.T01:intron | 40.0% | |
| CTGTCACTACATCATGATCA+CGG | - | Chr2:75573714-75573733 | MsG0280010834.01.T01:intron | 40.0% | |
| CTTAACAGAAACATGCAAGG+AGG | + | Chr2:75573685-75573704 | None:intergenic | 40.0% | |
| CTTGAGCTACAAGCACATAA+AGG | - | Chr2:75577206-75577225 | MsG0280010834.01.T01:CDS | 40.0% | |
| GAACTTGGAAGGACGAATAA+AGG | - | Chr2:75574349-75574368 | MsG0280010834.01.T01:intron | 40.0% | |
| GAAGATTCTTTGGCGGTTAT+TGG | - | Chr2:75575725-75575744 | MsG0280010834.01.T01:intron | 40.0% | |
| GAGGTTCTTACAAAGGAGAT+TGG | - | Chr2:75577173-75577192 | MsG0280010834.01.T01:CDS | 40.0% | |
| GCTGATTATTAGCCCACTAT+AGG | - | Chr2:75576064-75576083 | MsG0280010834.01.T01:CDS | 40.0% | |
| GGAAATGAAATCAAAGGTGG+AGG | - | Chr2:75574454-75574473 | MsG0280010834.01.T01:intron | 40.0% | |
| GGAACTCGAAGATCAAGTTA+AGG | - | Chr2:75574475-75574494 | MsG0280010834.01.T01:intron | 40.0% | |
| GTGATCCATAAAAGCAGTGA+AGG | + | Chr2:75576267-75576286 | None:intergenic | 40.0% | |
| GTTGTTCTAGCAGAAAGATG+CGG | + | Chr2:75575613-75575632 | None:intergenic | 40.0% | |
| TAAACAAAGGCGAGAACTGT+GGG | + | Chr2:75576605-75576624 | None:intergenic | 40.0% | |
| TATGGAGATGTTTCAGACTC+TGG | - | Chr2:75575844-75575863 | MsG0280010834.01.T01:intron | 40.0% | |
| TCAAGAGAGAAGCAATTCGA+GGG | - | Chr2:75574380-75574399 | MsG0280010834.01.T01:intron | 40.0% | |
| TCAGAGAAGAAGAACTTGGA+AGG | - | Chr2:75574338-75574357 | MsG0280010834.01.T01:intron | 40.0% | |
| TGAAGTTTGTGACAAAGTGC+AGG | - | Chr2:75573956-75573975 | MsG0280010834.01.T01:intron | 40.0% | |
| TGAGTCAGAGAAGAAGAACT+TGG | - | Chr2:75574334-75574353 | MsG0280010834.01.T01:intron | 40.0% | |
| TGTCTCTGGTGATTCAGTTA+AGG | - | Chr2:75575195-75575214 | MsG0280010834.01.T01:CDS | 40.0% | |
| ! | ACAGTCTGAGGTTCTTACAA+AGG | - | Chr2:75577166-75577185 | MsG0280010834.01.T01:CDS | 40.0% |
| ! | GAATGGTAGTGCTGAAATGA+AGG | - | Chr2:75574265-75574284 | MsG0280010834.01.T01:intron | 40.0% |
| ! | TTGTGTGAGAGAAGAAGCAT+TGG | - | Chr2:75575661-75575680 | MsG0280010834.01.T01:intron | 40.0% |
| !! | CAGCTTTAAATCAGGATCCT+TGG | + | Chr2:75574591-75574610 | None:intergenic | 40.0% |
| AAACAAAGGCGAGAACTGTG+GGG | + | Chr2:75576604-75576623 | None:intergenic | 45.0% | |
| AAACATGCAAGGAGGAATCG+GGG | + | Chr2:75573677-75573696 | None:intergenic | 45.0% | |
| AATGCCCCTCAATGTTTGTC+AGG | + | Chr2:75575116-75575135 | None:intergenic | 45.0% | |
| ACTGTTGCAGTTGAGTCACA+TGG | - | Chr2:75575482-75575501 | MsG0280010834.01.T01:intron | 45.0% | |
| CGTAAGGTCTTTCTTCAGTG+AGG | + | Chr2:75573793-75573812 | None:intergenic | 45.0% | |
| CTAAACAAAGGCGAGAACTG+TGG | + | Chr2:75576606-75576625 | None:intergenic | 45.0% | |
| GAAACATGCAAGGAGGAATC+GGG | + | Chr2:75573678-75573697 | None:intergenic | 45.0% | |
| GCAATTCGAGGGACAAATGA+AGG | - | Chr2:75574391-75574410 | MsG0280010834.01.T01:intron | 45.0% | |
| GCTGTTTGAAAGACAAGCCA+AGG | - | Chr2:75574571-75574590 | MsG0280010834.01.T01:intron | 45.0% | |
| GGAAGAGCAGCTCTATTTGA+TGG | - | Chr2:75574016-75574035 | MsG0280010834.01.T01:intron | 45.0% | |
| GGAATTTGAAGGCAGAGTGA+AGG | - | Chr2:75574433-75574452 | MsG0280010834.01.T01:intron | 45.0% | |
| GGAGCTCGAATCAAAGAAGA+AGG | - | Chr2:75574496-75574515 | MsG0280010834.01.T01:intron | 45.0% | |
| GGATTGCAAACTACAGTCTG+AGG | - | Chr2:75577154-75577173 | MsG0280010834.01.T01:CDS | 45.0% | |
| GTTCCTCTTCCTTCCTTTCA+CGG | + | Chr2:75574124-75574143 | None:intergenic | 45.0% | |
| TGATAAGGACCGTGAAAGGA+AGG | - | Chr2:75574112-75574131 | MsG0280010834.01.T01:intron | 45.0% | |
| TGCTCAGCACAAGATAGCTA+TGG | - | Chr2:75575826-75575845 | MsG0280010834.01.T01:intron | 45.0% | |
| TGGTGGAACAAGTTTGCAGT+TGG | - | Chr2:75575445-75575464 | MsG0280010834.01.T01:intron | 45.0% | |
| TTGTCTCCCTTCTTACACAG+TGG | + | Chr2:75575569-75575588 | None:intergenic | 45.0% | |
| ! | ATGAAGGAGCCTAAGTTGAC+AGG | - | Chr2:75574629-75574648 | MsG0280010834.01.T01:intron | 45.0% |
| ! | CTGCAAACTTGTTCCACCAA+TGG | + | Chr2:75575444-75575463 | None:intergenic | 45.0% |
| AACAAAGGCGAGAACTGTGG+GGG | + | Chr2:75576603-75576622 | None:intergenic | 50.0% | |
| AGAGCGCAAGCTAGAGCTCA+AGG | - | Chr2:75574052-75574071 | MsG0280010834.01.T01:intron | 55.0% | |
| GCAAGGTGCAAGACCAGAAC+AGG | + | Chr2:75576810-75576829 | None:intergenic | 55.0% | |
| GGACCGTGAAAGGAAGGAAG+AGG | - | Chr2:75574118-75574137 | MsG0280010834.01.T01:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 75573492 | 75577235 | 75573492 | ID=MsG0280010834.01;Name=MsG0280010834.01 |
| Chr2 | mRNA | 75573492 | 75577235 | 75573492 | ID=MsG0280010834.01.T01;Parent=MsG0280010834.01;Name=MsG0280010834.01.T01;_AED=0.46;_eAED=0.47;_QI=0|0|0|1|1|1|4|0|666 |
| Chr2 | exon | 75576026 | 75577235 | 75576026 | ID=MsG0280010834.01.T01:exon:27780;Parent=MsG0280010834.01.T01 |
| Chr2 | exon | 75574840 | 75575319 | 75574840 | ID=MsG0280010834.01.T01:exon:27779;Parent=MsG0280010834.01.T01 |
| Chr2 | exon | 75573723 | 75573895 | 75573723 | ID=MsG0280010834.01.T01:exon:27778;Parent=MsG0280010834.01.T01 |
| Chr2 | exon | 75573492 | 75573629 | 75573492 | ID=MsG0280010834.01.T01:exon:27777;Parent=MsG0280010834.01.T01 |
| Chr2 | CDS | 75576026 | 75577235 | 75576026 | ID=MsG0280010834.01.T01:cds;Parent=MsG0280010834.01.T01 |
| Chr2 | CDS | 75574840 | 75575319 | 75574840 | ID=MsG0280010834.01.T01:cds;Parent=MsG0280010834.01.T01 |
| Chr2 | CDS | 75573723 | 75573895 | 75573723 | ID=MsG0280010834.01.T01:cds;Parent=MsG0280010834.01.T01 |
| Chr2 | CDS | 75573492 | 75573629 | 75573492 | ID=MsG0280010834.01.T01:cds;Parent=MsG0280010834.01.T01 |
| Gene Sequence |
| Protein sequence |
