AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006324.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006324.01.T01 MTR_5g088980 47.273 55 29 0 4 58 260 314 6.94e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006324.01.T01 AT5G06150 54.000 50 23 0 4 53 277 326 3.83e-11 59.7
MsG0280006324.01.T01 AT3G11520 55.102 49 22 0 4 52 254 302 8.36e-11 58.5
MsG0280006324.01.T01 AT3G11520 55.102 49 22 0 4 52 254 302 9.09e-11 58.5

Find 24 sgRNAs with CRISPR-Local

Find 178 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCTCCATTGAAATAAAC+TGG 0.328272 2:+440995 None:intergenic
AAATTAGGCCTTACCTGGTT+GGG 0.353415 2:+438063 None:intergenic
TACCTGGTTGGGGCGGCTGA+TGG 0.354875 2:+438074 None:intergenic
CAGACACCAGTTTATTTCAA+TGG 0.361302 2:-441001 MsG0280006324.01.T01:CDS
GTCATAACTGTTCGTGTTGC+TGG 0.370777 2:+438164 None:intergenic
GTGATTTGTACCTTTACAAT+TGG 0.379417 2:-438125 MsG0280006324.01.T01:CDS
AACACTAAAATGGAATTTAA+CGG 0.390252 2:-440962 MsG0280006324.01.T01:CDS
TCTCTTGAATTAGTAGTCAC+TGG 0.449873 2:+438098 None:intergenic
GTCATGCACAATAGATGATC+CGG 0.478567 2:+440906 None:intergenic
CTCTTGAATTAGTAGTCACT+GGG 0.480244 2:+438099 None:intergenic
AATTAGGCCTTACCTGGTTG+GGG 0.507171 2:+438064 None:intergenic
TCAGCCGCCCCAACCAGGTA+AGG 0.507965 2:-438071 None:intergenic
ATAGGAAATTAGGCCTTACC+TGG 0.510776 2:+438058 None:intergenic
GAAATTAGGCCTTACCTGGT+TGG 0.515109 2:+438062 None:intergenic
AGAGCAATATGACCTTTCTC+AGG 0.515131 2:+440165 None:intergenic
CAAATCACAGGTTCAGCTGC+TGG 0.517183 2:+438140 None:intergenic
ATTGTAAAGGTACAAATCAC+AGG 0.532908 2:+438128 None:intergenic
ATCCATCAGCCGCCCCAACC+AGG 0.537210 2:-438076 MsG0280006324.01.T01:CDS
CACTGGGGAGCCAATTGTAA+AGG 0.552612 2:+438115 None:intergenic
AAATTCTCAAGTCCTGAGAA+AGG 0.562056 2:-440177 MsG0280006324.01.T01:intron
CAGATACTGCGCCACACAGT+TGG 0.564634 2:-440250 MsG0280006324.01.T01:CDS
CTATTGTGCATGACAAAGAG+AGG 0.625264 2:-440897 MsG0280006324.01.T01:intron
TAGGCCTTACCTGGTTGGGG+CGG 0.627968 2:+438067 None:intergenic
TCTTGAATTAGTAGTCACTG+GGG 0.747343 2:+438100 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTATAAAAACACTAAAA+TGG - Chr2:438152-438171 MsG0280006324.01.T01:CDS 10.0%
!! AAATTGAACTAAAAATACAT+AGG + Chr2:438197-438216 None:intergenic 15.0%
!! AAATTTATGAAATAGCAATT+TGG - Chr2:438299-438318 MsG0280006324.01.T01:intron 15.0%
!! TAAAAGTAGAAATAAAAGAA+TGG + Chr2:439439-439458 None:intergenic 15.0%
!! TAATTTGACTGTAATAATAA+TGG - Chr2:440752-440771 MsG0280006324.01.T01:intron 15.0%
!! TTTCATTTGTGAAAAAATTA+TGG - Chr2:440431-440450 MsG0280006324.01.T01:intron 15.0%
!!! ATGTTATTTGGTTTATTTAT+AGG - Chr2:439554-439573 MsG0280006324.01.T01:intron 15.0%
!!! TGTTATTTGGTTTATTTATA+GGG - Chr2:439555-439574 MsG0280006324.01.T01:intron 15.0%
!! AACACTAAAATGGAATTTAA+CGG - Chr2:438162-438181 MsG0280006324.01.T01:CDS 20.0%
!! AGATTAATTAGCATATGTTT+GGG - Chr2:439060-439079 MsG0280006324.01.T01:intron 20.0%
!! TAAAAATGAAATTATCTCGT+TGG - Chr2:439350-439369 MsG0280006324.01.T01:intron 20.0%
!! TAGATTAATTAGCATATGTT+TGG - Chr2:439059-439078 MsG0280006324.01.T01:intron 20.0%
!! TTTGACACTTAAAAAAACAT+TGG + Chr2:440219-440238 None:intergenic 20.0%
!!! ATTCACTAACATTCATTTTA+AGG + Chr2:438327-438346 None:intergenic 20.0%
!!! ATTTTTAAAGAATCCAAAAC+TGG + Chr2:439337-439356 None:intergenic 20.0%
!!! CTTTTATTTCTACTTTTACA+AGG - Chr2:439441-439460 MsG0280006324.01.T01:intron 20.0%
!!! GCTATTTCATAAATTTTAAG+AGG + Chr2:438295-438314 None:intergenic 20.0%
!!! GTATTTTTAGTTCAATTTAC+CGG - Chr2:438199-438218 MsG0280006324.01.T01:intron 20.0%
!!! TTCACTAACATTCATTTTAA+GGG + Chr2:438326-438345 None:intergenic 20.0%
! AAATTCAGTCAATACAAAAC+AGG - Chr2:440670-440689 MsG0280006324.01.T01:intron 25.0%
! AAATTGTAAAAGTGGAACAA+TGG + Chr2:438531-438550 None:intergenic 25.0%
! AACATATCCTTCTTCAAAAA+GGG - Chr2:440062-440081 MsG0280006324.01.T01:intron 25.0%
! AATTTATCACATTCTGTAAC+AGG - Chr2:439643-439662 MsG0280006324.01.T01:intron 25.0%
! ACTAAAAATACATAGGATGT+AGG + Chr2:438190-438209 None:intergenic 25.0%
! ACTATTAGCATTTAACGAAA+GGG + Chr2:438789-438808 None:intergenic 25.0%
! ATTGCATGATATATATGTTG+TGG + Chr2:440025-440044 None:intergenic 25.0%
! CAAAACCTTCAAAAAAATTG+TGG + Chr2:438374-438393 None:intergenic 25.0%
! CTTCAATGTTAAAACTGTAT+CGG + Chr2:440407-440426 None:intergenic 25.0%
! GAGAACCTATTCAAATAAAT+GGG - Chr2:438411-438430 MsG0280006324.01.T01:intron 25.0%
! GATTGGTATTCTTTAATTGA+AGG - Chr2:438472-438491 MsG0280006324.01.T01:intron 25.0%
! TTCCATAGCAATATATTATC+AGG - Chr2:439936-439955 MsG0280006324.01.T01:intron 25.0%
! TTGATGTTTACTAAACTGAT+TGG - Chr2:438455-438474 MsG0280006324.01.T01:intron 25.0%
!! AAAAATTGTGGTGCTAAATT+TGG + Chr2:438362-438381 None:intergenic 25.0%
!! AATCTTTCTTTGATGTTTTG+TGG + Chr2:438995-439014 None:intergenic 25.0%
!! AGTTTTTCTTGAACACTATT+GGG + Chr2:440840-440859 None:intergenic 25.0%
!! ATTTGGTTTATTTATAGGGA+TGG - Chr2:439559-439578 MsG0280006324.01.T01:intron 25.0%
!! TAGTTTTTCTTGAACACTAT+TGG + Chr2:440841-440860 None:intergenic 25.0%
!! TGATATCTATCTATTGATTG+AGG + Chr2:440147-440166 None:intergenic 25.0%
!! TTTTGTGTTTATCTTAAGCA+TGG - Chr2:438389-438408 MsG0280006324.01.T01:intron 25.0%
!!! AAATCGTGATGTTTTTAGTA+TGG + Chr2:440699-440718 None:intergenic 25.0%
!!! ATCATTCTTTAGTTGATAGA+TGG + Chr2:439893-439912 None:intergenic 25.0%
!!! GATACTTTAATTTGTAGCTT+AGG - Chr2:439735-439754 MsG0280006324.01.T01:intron 25.0%
!!! TATTTCTACTTTTACAAGGA+AGG - Chr2:439445-439464 MsG0280006324.01.T01:intron 25.0%
!!! TCATTCTTTAGTTGATAGAT+GGG + Chr2:439892-439911 None:intergenic 25.0%
AGAGGTAAACATCTATCTAT+AGG - Chr2:439373-439392 MsG0280006324.01.T01:intron 30.0%
AGTATTATAATGCTTCCACA+CGG + Chr2:440791-440810 None:intergenic 30.0%
ATGAAATTACTCAGATTCGA+AGG - Chr2:439530-439549 MsG0280006324.01.T01:intron 30.0%
ATTTGTCCACATTACACAAA+AGG + Chr2:439253-439272 None:intergenic 30.0%
CAAAATATATGCAACTCCTT+TGG - Chr2:438558-438577 MsG0280006324.01.T01:intron 30.0%
CAACATATCCTTCTTCAAAA+AGG - Chr2:440061-440080 MsG0280006324.01.T01:intron 30.0%
CTATTAGCATTTAACGAAAG+GGG + Chr2:438788-438807 None:intergenic 30.0%
CTTTCTCCATTGAAATAAAC+TGG + Chr2:438132-438151 None:intergenic 30.0%
GACCTGATAATATATTGCTA+TGG + Chr2:439941-439960 None:intergenic 30.0%
GACTATTAGCATTTAACGAA+AGG + Chr2:438790-438809 None:intergenic 30.0%
GCTTATTTGTACTTGTGTTA+AGG + Chr2:440281-440300 None:intergenic 30.0%
GGAGAACCTATTCAAATAAA+TGG - Chr2:438410-438429 MsG0280006324.01.T01:intron 30.0%
GGTTCTCTAAATTGTAAAAG+TGG + Chr2:438539-438558 None:intergenic 30.0%
GTCTACCCATTTATTTGAAT+AGG + Chr2:438419-438438 None:intergenic 30.0%
TATGGAGTTTAAGAGAATCT+AGG - Chr2:440449-440468 MsG0280006324.01.T01:intron 30.0%
TCTGTTATCAACAACACAAA+GGG - Chr2:439825-439844 MsG0280006324.01.T01:intron 30.0%
TCTTGTAAATTATCATGTCG+TGG - Chr2:438627-438646 MsG0280006324.01.T01:intron 30.0%
TGTGATAAATTCAAGCACTT+CGG + Chr2:439634-439653 None:intergenic 30.0%
TTAATGAATAGTACCAATCG+AGG + Chr2:440190-440209 None:intergenic 30.0%
TTCTGTTATCAACAACACAA+AGG - Chr2:439824-439843 MsG0280006324.01.T01:intron 30.0%
! ATTAATCTAGCTTCAAGCAA+TGG + Chr2:439048-439067 None:intergenic 30.0%
! ATTGTAAAGGTACAAATCAC+AGG + Chr2:440999-441018 None:intergenic 30.0%
! CAAAGGAGTTGCATATATTT+TGG + Chr2:438560-438579 None:intergenic 30.0%
! CATTCTGTTATTTACATAGC+AGG - Chr2:439786-439805 MsG0280006324.01.T01:intron 30.0%
! GAATTTCCTTTTGTGTAATG+TGG - Chr2:439244-439263 MsG0280006324.01.T01:intron 30.0%
! GTGATTTGTACCTTTACAAT+TGG - Chr2:440999-441018 MsG0280006324.01.T01:CDS 30.0%
! GTTCAGCTGTTATGATATTT+TGG + Chr2:440903-440922 None:intergenic 30.0%
!! TTGTGTTGTTGATAACAGAA+AGG + Chr2:439824-439843 None:intergenic 30.0%
!!! ACAATCTCACTTTTTTGGAT+TGG - Chr2:439585-439604 MsG0280006324.01.T01:intron 30.0%
!!! AGAATTTTTTGTACACAGCA+TGG + Chr2:438934-438953 None:intergenic 30.0%
!!! GGAAAACAATCTCACTTTTT+TGG - Chr2:439580-439599 MsG0280006324.01.T01:intron 30.0%
!!! TAGCACCACAATTTTTTTGA+AGG - Chr2:438366-438385 MsG0280006324.01.T01:intron 30.0%
AAATTCTCAAGTCCTGAGAA+AGG - Chr2:438947-438966 MsG0280006324.01.T01:intron 35.0%
AACATCTATCTATAGGTGGA+AGG - Chr2:439380-439399 MsG0280006324.01.T01:intron 35.0%
AATGATCGAAGCCTAAGATT+AGG - Chr2:439907-439926 MsG0280006324.01.T01:intron 35.0%
ACATCTATCTATAGGTGGAA+GGG - Chr2:439381-439400 MsG0280006324.01.T01:intron 35.0%
ATCCTATTAGATCTTCGACA+TGG - Chr2:439308-439327 MsG0280006324.01.T01:intron 35.0%
ATGAAATTATCTCGTTGGAG+AGG - Chr2:439355-439374 MsG0280006324.01.T01:intron 35.0%
ATGCTCGTTCTATACTCAAT+AGG - Chr2:438697-438716 MsG0280006324.01.T01:intron 35.0%
ATTTGCATAGATGGAGAACA+TGG - Chr2:438582-438601 MsG0280006324.01.T01:intron 35.0%
CAGACACCAGTTTATTTCAA+TGG - Chr2:438123-438142 MsG0280006324.01.T01:CDS 35.0%
CTATGTATCTTGTGGAAATC+AGG + Chr2:439129-439148 None:intergenic 35.0%
CTCTTGAATTAGTAGTCACT+GGG + Chr2:441028-441047 None:intergenic 35.0%
GGAATACATATCATAGAGAC+AGG + Chr2:439671-439690 None:intergenic 35.0%
GGTAAACATCTATCTATAGG+TGG - Chr2:439376-439395 MsG0280006324.01.T01:intron 35.0%
GTGAAATTTGTGCTAATACG+AGG + Chr2:440334-440353 None:intergenic 35.0%
TACTCAATAGGGTTCCATAT+TGG - Chr2:438709-438728 MsG0280006324.01.T01:intron 35.0%
TCCATCTATGCAAATACCAA+AGG + Chr2:438577-438596 None:intergenic 35.0%
TCCTTTGGTATTTGCATAGA+TGG - Chr2:438573-438592 MsG0280006324.01.T01:intron 35.0%
TCTCTTGAATTAGTAGTCAC+TGG + Chr2:441029-441048 None:intergenic 35.0%
TCTTCATATAAGCGTGTGTT+TGG + Chr2:440619-440638 None:intergenic 35.0%
TCTTGAATTAGTAGTCACTG+GGG + Chr2:441027-441046 None:intergenic 35.0%
TGAAATATCTGAACCTCGAT+TGG - Chr2:440174-440193 MsG0280006324.01.T01:intron 35.0%
TGATTCCAAGAAGCTTCAAA+AGG + Chr2:440549-440568 None:intergenic 35.0%
TGCAGATATTGAGTCCAATA+TGG + Chr2:438726-438745 None:intergenic 35.0%
TGCTCGTTCTATACTCAATA+GGG - Chr2:438698-438717 MsG0280006324.01.T01:intron 35.0%
TGGAATGAATGCCTAATCTT+AGG + Chr2:439921-439940 None:intergenic 35.0%
TGGAATGTTGAAGCTATTTG+TGG + Chr2:440363-440382 None:intergenic 35.0%
TGTCGAAGATCTAATAGGAT+TGG + Chr2:439308-439327 None:intergenic 35.0%
TTAAGAGAATCTAGGTGACT+TGG - Chr2:440457-440476 MsG0280006324.01.T01:intron 35.0%
TTCCATGTCGAAGATCTAAT+AGG + Chr2:439313-439332 None:intergenic 35.0%
! ACAAATTGCCTTTCGCATTT+TGG - Chr2:439267-439286 MsG0280006324.01.T01:intron 35.0%
! AGATTCGAAGGCATGTTATT+TGG - Chr2:439542-439561 MsG0280006324.01.T01:intron 35.0%
! CAAATTGCCTTTCGCATTTT+GGG - Chr2:439268-439287 MsG0280006324.01.T01:intron 35.0%
! TTTGAAGCTTCTTGGAATCA+CGG - Chr2:440549-440568 MsG0280006324.01.T01:intron 35.0%
!!! ATCTCACTTTTTTGGATTGG+TGG - Chr2:439588-439607 MsG0280006324.01.T01:intron 35.0%
AAGCTGCACTATGTATCTTG+TGG + Chr2:439137-439156 None:intergenic 40.0%
AGAGCAATATGACCTTTCTC+AGG + Chr2:438962-438981 None:intergenic 40.0%
ATGAGATGAGTTCGAACTGA+TGG + Chr2:440383-440402 None:intergenic 40.0%
CAAACTCTACAGCATGAACT+TGG - Chr2:439196-439215 MsG0280006324.01.T01:intron 40.0%
CAAGTTCATGCTGTAGAGTT+TGG + Chr2:439198-439217 None:intergenic 40.0%
CAATATCTGCAGAACCTATC+TGG - Chr2:438735-438754 MsG0280006324.01.T01:intron 40.0%
CACTGCATCAATCATTGAAG+GGG + Chr2:438662-438681 None:intergenic 40.0%
CAGGAAACTACTGTTGTGAA+GGG - Chr2:439695-439714 MsG0280006324.01.T01:intron 40.0%
CGGTAGGAAAATCAATTCAG+CGG - Chr2:440496-440515 MsG0280006324.01.T01:intron 40.0%
CTATTGTGCATGACAAAGAG+AGG - Chr2:438227-438246 MsG0280006324.01.T01:intron 40.0%
GCACTGCATCAATCATTGAA+GGG + Chr2:438663-438682 None:intergenic 40.0%
GCTGGTACACAAAAATTGTG+AGG + Chr2:440945-440964 None:intergenic 40.0%
GGACAACGTTGTTTGTATGT+TGG + Chr2:440305-440324 None:intergenic 40.0%
GTCATGCACAATAGATGATC+CGG + Chr2:438221-438240 None:intergenic 40.0%
GTTGAGCATAAACAACACAC+AGG - Chr2:440105-440124 MsG0280006324.01.T01:intron 40.0%
TATGATATGTATTCCGTGCC+AGG - Chr2:439676-439695 MsG0280006324.01.T01:intron 40.0%
TCATGCTGTAGAGTTTGGTT+TGG + Chr2:439193-439212 None:intergenic 40.0%
TGCACTGCATCAATCATTGA+AGG + Chr2:438664-438683 None:intergenic 40.0%
TGTGCTAATACGAGGTTTGA+AGG + Chr2:440326-440345 None:intergenic 40.0%
! GTGTATTTTCACCAACTGTG+TGG + Chr2:438888-438907 None:intergenic 40.0%
! TAAGCGTGTGTTTGGAATCA+CGG + Chr2:440611-440630 None:intergenic 40.0%
! TCTTTGATGTTTTGTGGCAG+TGG + Chr2:438989-439008 None:intergenic 40.0%
! TTCGACATGGAAACCAGTTT+TGG - Chr2:439321-439340 MsG0280006324.01.T01:intron 40.0%
!! AAAAGCACCAAAATGTGAGG+TGG + Chr2:439104-439123 None:intergenic 40.0%
!! AAGGGTGGTGTTGATTCATT+CGG - Chr2:439399-439418 MsG0280006324.01.T01:intron 40.0%
!! GTGAAAAGCACCAAAATGTG+AGG + Chr2:439107-439126 None:intergenic 40.0%
!! TGTTGTGCCCTTTTTGAAGA+AGG + Chr2:440072-440091 None:intergenic 40.0%
!! TTTGGATTGGTGGAATTGTC+CGG - Chr2:439598-439617 MsG0280006324.01.T01:intron 40.0%
!!! AGCTACCTTTTGAAGCTTCT+TGG - Chr2:440541-440560 MsG0280006324.01.T01:intron 40.0%
AAGCTTCTTGGAATCACGGT+GGG - Chr2:440553-440572 MsG0280006324.01.T01:intron 45.0%
ACAACAGTAGTTTCCTGGCA+CGG + Chr2:439692-439711 None:intergenic 45.0%
ACTCTACAGCATGAACTTGG+AGG - Chr2:439199-439218 MsG0280006324.01.T01:intron 45.0%
AGGTAGTCCCAAAATGCGAA+AGG + Chr2:439278-439297 None:intergenic 45.0%
CAAGACCAAGTTCTGCTAGA+TGG + Chr2:438612-438631 None:intergenic 45.0%
CCAGGAAACTACTGTTGTGA+AGG - Chr2:439694-439713 MsG0280006324.01.T01:intron 45.0%
CCTTCACAACAGTAGTTTCC+TGG + Chr2:439697-439716 None:intergenic 45.0%
GAAACTACTGTTGTGAAGGG+AGG - Chr2:439698-439717 MsG0280006324.01.T01:intron 45.0%
GCACTTCGGATATATGACAC+CGG + Chr2:439620-439639 None:intergenic 45.0%
GCATTCCATCTAGCAGAACT+TGG - Chr2:438604-438623 MsG0280006324.01.T01:intron 45.0%
GTCATAACTGTTCGTGTTGC+TGG + Chr2:440963-440982 None:intergenic 45.0%
GTTCTTTGCAGTAGCCAGAT+AGG + Chr2:438752-438771 None:intergenic 45.0%
TCTATCTATAGGTGGAAGGG+TGG - Chr2:439384-439403 MsG0280006324.01.T01:intron 45.0%
TTGGTGTGTGTTTGTGCAAG+CGG - Chr2:440476-440495 MsG0280006324.01.T01:intron 45.0%
!! AGGGTGGTGTTGATTCATTC+GGG - Chr2:439400-439419 MsG0280006324.01.T01:intron 45.0%
!! TGCTGTAGAGTTTGGTTTGG+CGG + Chr2:439190-439209 None:intergenic 45.0%
AATCACGGTGGGAAATGCCT+CGG - Chr2:440564-440583 MsG0280006324.01.T01:intron 50.0%
AGCACCAAAATGTGAGGTGG+TGG + Chr2:439101-439120 None:intergenic 50.0%
AGGTAGCTTCTCCTCAAACG+TGG + Chr2:440529-440548 None:intergenic 50.0%
CAAATCACAGGTTCAGCTGC+TGG + Chr2:440987-441006 None:intergenic 50.0%
CACTGGGGAGCCAATTGTAA+AGG + Chr2:441012-441031 None:intergenic 50.0%
GAAGCTTCTTGGAATCACGG+TGG - Chr2:440552-440571 MsG0280006324.01.T01:intron 50.0%
GGTAGCTTCTCCTCAAACGT+GGG + Chr2:440528-440547 None:intergenic 50.0%
TGCTTCCACACGGTAGAAGA+AGG + Chr2:440781-440800 None:intergenic 50.0%
TGTGTGTTTGTGCAAGCGGT+AGG - Chr2:440480-440499 MsG0280006324.01.T01:intron 50.0%
! GCTTAGGAGCATGACAGTGA+TGG - Chr2:439751-439770 MsG0280006324.01.T01:intron 50.0%
! GGAGGAGTCTTTTGCTGAAG+CGG - Chr2:439217-439236 MsG0280006324.01.T01:intron 50.0%
! TTCGCCACCACCTCACATTT+TGG - Chr2:439094-439113 MsG0280006324.01.T01:intron 50.0%
!! CTAATAGGATTGGCTCCCAC+AGG + Chr2:439298-439317 None:intergenic 50.0%
!! GTAGAGTTTGGTTTGGCGGT+TGG + Chr2:439186-439205 None:intergenic 50.0%
!!! CGCATTTTGGGACTACCTGT+GGG - Chr2:439280-439299 MsG0280006324.01.T01:intron 50.0%
!!! TCGCATTTTGGGACTACCTG+TGG - Chr2:439279-439298 MsG0280006324.01.T01:intron 50.0%
AATGCCTCGGAACGCGCAAA+AGG - Chr2:440577-440596 MsG0280006324.01.T01:intron 55.0%
CAGATACTGCGCCACACAGT+TGG - Chr2:438874-438893 MsG0280006324.01.T01:intron 55.0%
GCGGCAAAAACCCACGTTTG+AGG - Chr2:440515-440534 MsG0280006324.01.T01:intron 55.0%
GGAAGCCTTCTTCTACCGTG+TGG - Chr2:440773-440792 MsG0280006324.01.T01:intron 55.0%
! AACACCTTTTGCGCGTTCCG+AGG + Chr2:440584-440603 None:intergenic 55.0%
ATCCATCAGCCGCCCCAACC+AGG - Chr2:441048-441067 MsG0280006324.01.T01:CDS 65.0%
TACCTGGTTGGGGCGGCTGA+TGG + Chr2:441053-441072 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 438073 441073 438073 ID=MsG0280006324.01;Name=MsG0280006324.01
Chr2 mRNA 438073 441073 438073 ID=MsG0280006324.01.T01;Parent=MsG0280006324.01;Name=MsG0280006324.01.T01;_AED=0.50;_eAED=0.54;_QI=0|0|0|1|0|0|3|0|135
Chr2 exon 440898 441073 440898 ID=MsG0280006324.01.T01:exon:803;Parent=MsG0280006324.01.T01
Chr2 exon 440178 440269 440178 ID=MsG0280006324.01.T01:exon:802;Parent=MsG0280006324.01.T01
Chr2 exon 438073 438212 438073 ID=MsG0280006324.01.T01:exon:801;Parent=MsG0280006324.01.T01
Chr2 CDS 440898 441073 440898 ID=MsG0280006324.01.T01:cds;Parent=MsG0280006324.01.T01
Chr2 CDS 440178 440269 440178 ID=MsG0280006324.01.T01:cds;Parent=MsG0280006324.01.T01
Chr2 CDS 438073 438212 438073 ID=MsG0280006324.01.T01:cds;Parent=MsG0280006324.01.T01
Gene Sequence

>MsG0280006324.01.T01

TTGGAATGGCAGGTCAATGAATTGTTGTTATTAACAGTTAATTCTTATAGCAGACACCAGTTTATTTCAATGGAGAAAGATATTATAAAAACACTAAAATGGAATTTAACGGTTCCTACATCCTATGTATTTTTAGTTCAATTTACCGGATCATCTATTGTGCATGACAAAGAGAGATACTGCGCCACACAGTTGGTGAAAATACACGCAGATGCAAGAGATTTTGAAATCCATGCTGTGTACAAAAAATTCTCAAGTCCTGAGAAAGATACTTTTCCTCACAATTTTTGTGTACCAGCAACACGAACAGTTATGACACCAGCAGCTGAACCTGTGATTTGTACCTTTACAATTGGCTCCCCAGTGACTACTAATTCAAGAGATCCATCAGCCGCCCCAACCAGGTAA

Protein sequence

>MsG0280006324.01.T01

LEWQVNELLLLTVNSYSRHQFISMEKDIIKTLKWNLTVPTSYVFLVQFTGSSIVHDKERYCATQLVKIHADARDFEIHAVYKKFSSPEKDTFPHNFCVPATRTVMTPAAEPVICTFTIGSPVTTNSRDPSAAPTR*