Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008114.01.T03 | XP_003594886.1 | 99.441 | 179 | 1 | 0 | 1 | 179 | 1 | 179 | 6.43E-129 | 372 |
MsG0280008114.01.T04 | RHN73306.1 | 96.124 | 129 | 5 | 0 | 1 | 129 | 1 | 129 | 6.13E-86 | 261 |
MsG0280008114.01.T02 | XP_003594886.1 | 98.684 | 228 | 3 | 0 | 1 | 228 | 1 | 228 | 5.11E-166 | 467 |
MsG0280008114.01.T01 | XP_003594886.1 | 99.153 | 236 | 2 | 0 | 1 | 236 | 1 | 236 | 4.53E-173 | 485 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008114.01.T01 | Q8N6R0 | 30.137 | 219 | 128 | 9 | 1 | 200 | 4 | 216 | 1.44E-26 | 110 |
MsG0280008114.01.T02 | Q8N6R0 | 30.137 | 219 | 128 | 9 | 1 | 200 | 4 | 216 | 1.02E-26 | 110 |
MsG0280008114.01.T03 | Q8N6R0 | 32.105 | 190 | 113 | 7 | 1 | 180 | 4 | 187 | 7.89E-27 | 110 |
MsG0280008114.01.T04 | Q8N6R0 | 36.641 | 131 | 79 | 4 | 1 | 129 | 4 | 132 | 5.08E-23 | 96.3 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008114.01.T01 | G7INF4 | 99.153 | 236 | 2 | 0 | 1 | 236 | 1 | 236 | 2.16e-173 | 485 |
MsG0280008114.01.T02 | G7INF4 | 98.684 | 228 | 3 | 0 | 1 | 228 | 1 | 228 | 2.44e-166 | 467 |
MsG0280008114.01.T03 | G7INF4 | 99.441 | 179 | 1 | 0 | 1 | 179 | 1 | 179 | 3.07e-129 | 372 |
MsG0280008114.01.T04 | A0A396J5C4 | 96.124 | 129 | 5 | 0 | 1 | 129 | 1 | 129 | 2.93e-86 | 261 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080047959.01 | MsG0280008114.01 | 0.802255 | 6.118564e-49 | 2.983262e-46 |
MsG0080048073.01 | MsG0280008114.01 | 0.820349 | 7.190866e-53 | 5.675687e-50 |
MsG0080048464.01 | MsG0280008114.01 | 0.804540 | 2.057088e-49 | 1.063396e-46 |
MsG0180000210.01 | MsG0280008114.01 | 0.809304 | 2.021293e-50 | 1.182538e-47 |
MsG0180000777.01 | MsG0280008114.01 | 0.814070 | 1.857594e-51 | 1.234076e-48 |
MsG0180000814.01 | MsG0280008114.01 | 0.833973 | 3.919752e-56 | 4.587777e-53 |
MsG0180000982.01 | MsG0280008114.01 | 0.823648 | 1.236741e-53 | 1.071304e-50 |
MsG0180001088.01 | MsG0280008114.01 | 0.807769 | 4.299237e-50 | 2.415283e-47 |
MsG0180001207.01 | MsG0280008114.01 | 0.824672 | 7.108894e-54 | 6.340272e-51 |
MsG0180001381.01 | MsG0280008114.01 | 0.803901 | 2.794599e-49 | 1.421219e-46 |
MsG0180001886.01 | MsG0280008114.01 | 0.803963 | 2.712106e-49 | 1.381464e-46 |
MsG0180002955.01 | MsG0280008114.01 | 0.806587 | 7.649729e-50 | 4.167819e-47 |
MsG0180003189.01 | MsG0280008114.01 | 0.838289 | 3.142572e-57 | 4.189501e-54 |
MsG0180003357.01 | MsG0280008114.01 | 0.814175 | 1.761482e-51 | 1.173507e-48 |
MsG0180003671.01 | MsG0280008114.01 | 0.805268 | 1.449126e-49 | 7.632907e-47 |
MsG0180003673.01 | MsG0280008114.01 | 0.833643 | 4.739278e-56 | 5.491333e-53 |
MsG0180003686.01 | MsG0280008114.01 | 0.820326 | 7.277448e-53 | 5.740047e-50 |
MsG0180003725.01 | MsG0280008114.01 | 0.826690 | 2.362319e-54 | 2.231331e-51 |
MsG0180004465.01 | MsG0280008114.01 | 0.801733 | 7.835097e-49 | 3.769583e-46 |
MsG0180004984.01 | MsG0280008114.01 | 0.803452 | 3.463265e-49 | 1.740994e-46 |
MsG0180005185.01 | MsG0280008114.01 | 0.815432 | 9.274801e-52 | 6.393430e-49 |
MsG0180005398.01 | MsG0280008114.01 | 0.821081 | 4.881106e-53 | 3.932117e-50 |
MsG0180005799.01 | MsG0280008114.01 | 0.839122 | 1.913752e-57 | 2.617064e-54 |
MsG0180006251.01 | MsG0280008114.01 | 0.810444 | 1.149083e-50 | 6.927582e-48 |
MsG0280006593.01 | MsG0280008114.01 | 0.815228 | 1.029600e-51 | 7.057394e-49 |
MsG0280007118.01 | MsG0280008114.01 | 0.812968 | 3.245666e-51 | 2.092593e-48 |
MsG0280007153.01 | MsG0280008114.01 | 0.814035 | 1.890692e-51 | 1.254868e-48 |
MsG0280007636.01 | MsG0280008114.01 | 0.802954 | 4.389871e-49 | 2.178781e-46 |
MsG0280007955.01 | MsG0280008114.01 | 0.819453 | 1.152240e-52 | 8.870765e-50 |
MsG0280008112.01 | MsG0280008114.01 | 0.858976 | 5.689797e-63 | 1.478986e-59 |
MsG0280008113.01 | MsG0280008114.01 | 0.875483 | 2.975033e-68 | 1.391102e-64 |
MsG0280008114.01 | MsG0280008648.01 | 0.812602 | 3.904345e-51 | 2.493135e-48 |
MsG0280008114.01 | MsG0280008738.01 | 0.810327 | 1.217996e-50 | 7.320244e-48 |
MsG0280008114.01 | MsG0280009024.01 | 0.831457 | 1.651419e-55 | 1.793163e-52 |
MsG0280008114.01 | MsG0280010233.01 | 0.817637 | 2.974172e-52 | 2.177732e-49 |
MsG0280008114.01 | MsG0280010531.01 | 0.802093 | 6.607642e-49 | 3.208410e-46 |
MsG0280008114.01 | MsG0280010599.01 | 0.807566 | 4.747196e-50 | 2.652856e-47 |
MsG0280008114.01 | MsG0280010702.01 | 0.843560 | 1.299618e-58 | 2.041287e-55 |
MsG0280008114.01 | MsG0280010807.01 | 0.803188 | 3.927223e-49 | 1.960913e-46 |
MsG0280008114.01 | MsG0280010896.01 | 0.807460 | 5.001020e-50 | 2.787137e-47 |
MsG0280008114.01 | MsG0280010945.01 | 0.850521 | 1.608943e-60 | 3.159958e-57 |
MsG0280008114.01 | MsG0280011109.01 | 0.823090 | 1.669780e-53 | 1.423779e-50 |
MsG0280008114.01 | MsG0280011156.01 | 0.807275 | 5.472825e-50 | 3.035451e-47 |
MsG0280008114.01 | MsG0280011413.01 | 0.806512 | 7.935186e-50 | 4.315142e-47 |
MsG0280008114.01 | MsG0380011537.01 | 0.812127 | 4.957304e-51 | 3.125611e-48 |
MsG0280008114.01 | MsG0380011669.01 | 0.828709 | 7.732635e-55 | 7.746543e-52 |
MsG0280008114.01 | MsG0380011755.01 | 0.801462 | 8.901466e-49 | 4.253573e-46 |
MsG0280008114.01 | MsG0380013342.01 | 0.800996 | 1.108865e-48 | 5.237225e-46 |
MsG0280008114.01 | MsG0380014248.01 | 0.805364 | 1.383735e-49 | 7.306727e-47 |
MsG0280008114.01 | MsG0380014277.01 | 0.836107 | 1.135722e-56 | 1.417135e-53 |
MsG0280008114.01 | MsG0380015538.01 | 0.809048 | 2.294051e-50 | 1.332930e-47 |
MsG0280008114.01 | MsG0380015847.01 | -0.815597 | 8.522762e-52 | 5.901829e-49 |
MsG0280008114.01 | MsG0380016055.01 | 0.804491 | 2.106182e-49 | 1.087384e-46 |
MsG0280008114.01 | MsG0380016064.01 | 0.818762 | 1.654800e-52 | 1.249858e-49 |
MsG0280008114.01 | MsG0380016133.01 | 0.800147 | 1.651914e-48 | 7.634982e-46 |
MsG0280008114.01 | MsG0380016187.01 | 0.820870 | 5.457902e-53 | 4.370901e-50 |
MsG0280008114.01 | MsG0380016285.01 | 0.825452 | 4.652190e-54 | 4.241778e-51 |
MsG0280008114.01 | MsG0380016694.01 | 0.829399 | 5.262538e-55 | 5.380103e-52 |
MsG0280008114.01 | MsG0380016923.01 | 0.812991 | 3.208498e-51 | 2.070020e-48 |
MsG0280008114.01 | MsG0380017048.01 | 0.823255 | 1.528101e-53 | 1.308936e-50 |
MsG0280008114.01 | MsG0380017293.01 | 0.818715 | 1.696123e-52 | 1.279326e-49 |
MsG0280008114.01 | MsG0380017326.01 | 0.807842 | 4.149345e-50 | 2.335480e-47 |
MsG0280008114.01 | MsG0380017543.01 | 0.853966 | 1.684529e-61 | 3.704387e-58 |
MsG0280008114.01 | MsG0380017551.01 | -0.814826 | 1.264247e-51 | 8.572033e-49 |
MsG0280008114.01 | MsG0480018214.01 | 0.824037 | 1.002452e-53 | 8.778172e-51 |
MsG0280008114.01 | MsG0480018236.01 | 0.846047 | 2.776201e-59 | 4.718486e-56 |
MsG0280008114.01 | MsG0480018473.01 | 0.814740 | 1.321034e-51 | 8.936383e-49 |
MsG0280008114.01 | MsG0480018778.01 | 0.810590 | 1.068583e-50 | 6.467471e-48 |
MsG0280008114.01 | MsG0480019151.01 | 0.806207 | 9.202840e-50 | 4.965943e-47 |
MsG0280008114.01 | MsG0480019434.01 | 0.838507 | 2.759552e-57 | 3.703924e-54 |
MsG0280008114.01 | MsG0480019435.01 | 0.802718 | 4.910911e-49 | 2.422909e-46 |
MsG0280008114.01 | MsG0480020319.01 | 0.802668 | 5.029564e-49 | 2.478145e-46 |
MsG0280008114.01 | MsG0480021332.01 | 0.838119 | 3.473910e-57 | 4.607549e-54 |
MsG0280008114.01 | MsG0480021465.01 | 0.822011 | 2.975697e-53 | 2.460370e-50 |
MsG0280008114.01 | MsG0480021534.01 | 0.800406 | 1.462794e-48 | 6.805812e-46 |
MsG0280008114.01 | MsG0480021917.01 | 0.821577 | 3.750678e-53 | 3.063146e-50 |
MsG0280008114.01 | MsG0480021959.01 | 0.812998 | 3.196523e-51 | 2.062691e-48 |
MsG0280008114.01 | MsG0480022068.01 | 0.827080 | 1.905850e-54 | 1.820849e-51 |
MsG0280008114.01 | MsG0480022145.01 | 0.803261 | 3.792157e-49 | 1.896973e-46 |
MsG0280008114.01 | MsG0480022178.01 | 0.809835 | 1.555035e-50 | 9.226661e-48 |
MsG0280008114.01 | MsG0480022403.01 | 0.803806 | 2.924610e-49 | 1.483611e-46 |
MsG0280008114.01 | MsG0480022750.01 | 0.848088 | 7.657738e-60 | 1.389266e-56 |
MsG0280008114.01 | MsG0480022916.01 | 0.806458 | 8.146364e-50 | 4.423996e-47 |
MsG0280008114.01 | MsG0480023025.01 | 0.804857 | 1.766030e-49 | 9.205312e-47 |
MsG0280008114.01 | MsG0480023357.01 | 0.801182 | 1.016002e-48 | 4.820824e-46 |
MsG0280008114.01 | MsG0480023489.01 | 0.807801 | 4.232969e-50 | 2.380080e-47 |
MsG0280008114.01 | MsG0480023943.01 | 0.821535 | 3.835428e-53 | 3.128699e-50 |
MsG0280008114.01 | MsG0480023994.01 | 0.852573 | 4.224846e-61 | 8.865642e-58 |
MsG0280008114.01 | MsG0480024005.01 | 0.803757 | 2.992991e-49 | 1.516457e-46 |
MsG0280008114.01 | MsG0480024014.01 | 0.823587 | 1.278564e-53 | 1.105524e-50 |
MsG0280008114.01 | MsG0580024160.01 | 0.847463 | 1.137981e-59 | 2.024432e-56 |
MsG0280008114.01 | MsG0580024328.01 | 0.844368 | 7.892766e-59 | 1.271338e-55 |
MsG0280008114.01 | MsG0580024435.01 | 0.825846 | 3.751416e-54 | 3.459608e-51 |
MsG0280008114.01 | MsG0580024775.01 | 0.800848 | 1.188588e-48 | 5.592418e-46 |
MsG0280008114.01 | MsG0580024935.01 | 0.840317 | 9.350824e-58 | 1.326871e-54 |
MsG0280008114.01 | MsG0580024997.01 | 0.804586 | 2.011558e-49 | 1.041128e-46 |
MsG0280008114.01 | MsG0580025758.01 | 0.813929 | 1.995547e-51 | 1.320589e-48 |
MsG0280008114.01 | MsG0580026002.01 | 0.832019 | 1.200204e-55 | 1.325062e-52 |
MsG0280008114.01 | MsG0580026086.01 | 0.848869 | 4.655709e-60 | 8.664708e-57 |
MsG0280008114.01 | MsG0580026304.01 | 0.827290 | 1.697388e-54 | 1.631697e-51 |
MsG0280008114.01 | MsG0580026340.01 | 0.832856 | 7.443463e-56 | 8.424168e-53 |
MsG0280008114.01 | MsG0580026510.01 | 0.811744 | 6.006883e-51 | 3.748409e-48 |
MsG0280008114.01 | MsG0580027228.01 | 0.815062 | 1.120776e-51 | 7.647803e-49 |
MsG0280008114.01 | MsG0580027320.01 | 0.801095 | 1.058257e-48 | 5.010692e-46 |
MsG0280008114.01 | MsG0580028918.01 | 0.814836 | 1.257762e-51 | 8.530369e-49 |
MsG0280008114.01 | MsG0580029038.01 | 0.802683 | 4.993089e-49 | 2.461176e-46 |
MsG0280008114.01 | MsG0580029376.01 | 0.807064 | 6.067007e-50 | 3.346468e-47 |
MsG0280008114.01 | MsG0580029514.01 | -0.807409 | 5.126995e-50 | 2.853567e-47 |
MsG0280008114.01 | MsG0580029924.01 | 0.810715 | 1.004429e-50 | 6.099650e-48 |
MsG0280008114.01 | MsG0580030142.01 | 0.818264 | 2.146164e-52 | 1.598691e-49 |
MsG0280008114.01 | MsG0680030413.01 | 0.843067 | 1.760103e-58 | 2.721516e-55 |
MsG0280008114.01 | MsG0680031334.01 | 0.828188 | 1.033076e-54 | 1.019396e-51 |
MsG0280008114.01 | MsG0680031344.01 | 0.811819 | 5.784059e-51 | 3.616583e-48 |
MsG0280008114.01 | MsG0680031377.01 | -0.811015 | 8.649154e-51 | 5.294952e-48 |
MsG0280008114.01 | MsG0680031468.01 | 0.824817 | 6.570386e-54 | 5.884204e-51 |
MsG0280008114.01 | MsG0680031505.01 | 0.803176 | 3.949499e-49 | 1.971435e-46 |
MsG0280008114.01 | MsG0680031617.01 | 0.808260 | 3.380753e-50 | 1.924090e-47 |
MsG0280008114.01 | MsG0680031708.01 | 0.811238 | 7.738483e-51 | 4.764842e-48 |
MsG0280008114.01 | MsG0680032157.01 | 0.802352 | 5.842879e-49 | 2.856016e-46 |
MsG0280008114.01 | MsG0680034918.01 | 0.825000 | 5.950681e-54 | 5.357044e-51 |
MsG0280008114.01 | MsG0680035707.01 | 0.806570 | 7.714645e-50 | 4.201426e-47 |
MsG0280008114.01 | MsG0780036128.01 | 0.823748 | 1.172140e-53 | 1.018267e-50 |
MsG0280008114.01 | MsG0780036593.01 | 0.812517 | 4.074169e-51 | 2.595900e-48 |
MsG0280008114.01 | MsG0780036810.01 | 0.824507 | 7.774205e-54 | 6.899759e-51 |
MsG0280008114.01 | MsG0780037141.01 | 0.805903 | 1.066045e-49 | 5.707819e-47 |
MsG0280008114.01 | MsG0780037848.01 | 0.805138 | 1.543070e-49 | 8.101029e-47 |
MsG0280008114.01 | MsG0780039143.01 | 0.835063 | 2.086710e-56 | 2.522975e-53 |
MsG0280008114.01 | MsG0780039144.01 | 0.828501 | 8.680628e-55 | 8.644028e-52 |
MsG0280008114.01 | MsG0780039170.01 | 0.801105 | 1.053248e-48 | 4.988159e-46 |
MsG0280008114.01 | MsG0780039229.01 | 0.829176 | 5.958393e-55 | 6.051941e-52 |
MsG0280008114.01 | MsG0780039423.01 | 0.809518 | 1.818389e-50 | 1.069910e-47 |
MsG0280008114.01 | MsG0780040888.01 | 0.816809 | 4.565406e-52 | 3.267959e-49 |
MsG0280008114.01 | MsG0780041015.01 | -0.800550 | 1.367502e-48 | 6.385437e-46 |
MsG0280008114.01 | MsG0780041065.01 | 0.823693 | 1.207239e-53 | 1.047172e-50 |
MsG0280008114.01 | MsG0780041080.01 | 0.830203 | 3.351154e-55 | 3.507064e-52 |
MsG0280008114.01 | MsG0780041187.01 | 0.825254 | 5.181428e-54 | 4.698228e-51 |
MsG0280008114.01 | MsG0780041387.01 | 0.806807 | 6.875626e-50 | 3.767397e-47 |
MsG0280008114.01 | MsG0780041491.01 | 0.815880 | 7.369166e-52 | 5.142342e-49 |
MsG0280008114.01 | MsG0880042065.01 | 0.816884 | 4.393439e-52 | 3.151327e-49 |
MsG0280008114.01 | MsG0880042622.01 | 0.817173 | 3.783326e-52 | 2.735264e-49 |
MsG0280008114.01 | MsG0880042700.01 | 0.802894 | 4.518214e-49 | 2.239101e-46 |
MsG0280008114.01 | MsG0880042743.01 | 0.805513 | 1.287156e-49 | 6.822679e-47 |
MsG0280008114.01 | MsG0880043454.01 | 0.812973 | 3.237424e-51 | 2.087586e-48 |
MsG0280008114.01 | MsG0880043509.01 | 0.810138 | 1.337845e-50 | 8.000988e-48 |
MsG0280008114.01 | MsG0880044394.01 | 0.817216 | 3.699123e-52 | 2.677578e-49 |
MsG0280008114.01 | MsG0880044416.01 | 0.816216 | 6.198878e-52 | 4.366081e-49 |
MsG0280008114.01 | MsG0880045111.01 | 0.839214 | 1.811550e-57 | 2.484609e-54 |
MsG0280008114.01 | MsG0880045371.01 | 0.825078 | 5.703287e-54 | 5.145723e-51 |
MsG0280008114.01 | MsG0880045387.01 | 0.826815 | 2.205807e-54 | 2.091043e-51 |
MsG0280008114.01 | MsG0880045613.01 | 0.803645 | 3.157349e-49 | 1.595099e-46 |
MsG0280008114.01 | MsG0880045736.01 | 0.804799 | 1.815939e-49 | 9.451098e-47 |
MsG0280008114.01 | MsG0880045783.01 | 0.815908 | 7.265017e-52 | 5.073487e-49 |
MsG0280008114.01 | MsG0880045992.01 | 0.801117 | 1.047508e-48 | 4.962354e-46 |
MsG0280008114.01 | MsG0880046531.01 | 0.817987 | 2.479306e-52 | 1.832896e-49 |
MsG0280008114.01 | MsG0880046724.01 | 0.807583 | 4.708769e-50 | 2.632443e-47 |
MsG0280008114.01 | MsG0880046790.01 | 0.831558 | 1.559715e-55 | 1.698719e-52 |
MsG0280008114.01 | MsG0880047045.01 | 0.859245 | 4.727531e-63 | 1.240210e-59 |
MsG0280008114.01 | MsG0880047046.01 | 0.847827 | 9.036499e-60 | 1.626221e-56 |
MsG0280008114.01 | MsG0880047052.01 | 0.817098 | 3.933397e-52 | 2.837864e-49 |
MsG0280008114.01 | MsG0880047764.01 | 0.816827 | 4.524223e-52 | 3.240036e-49 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008114.01.T03 | MTR_2g035820 | 99.441 | 179 | 1 | 0 | 1 | 179 | 1 | 179 | 7.79e-133 | 372 |
MsG0280008114.01.T03 | MTR_0003s0620 | 51.049 | 143 | 69 | 1 | 2 | 144 | 7 | 148 | 1.33e-47 | 153 |
MsG0280008114.01.T03 | MTR_0003s0620 | 48.148 | 135 | 69 | 1 | 2 | 136 | 7 | 140 | 6.60e-39 | 133 |
MsG0280008114.01.T03 | MTR_8g085220 | 35.526 | 152 | 88 | 5 | 14 | 157 | 25 | 174 | 1.58e-20 | 89.4 |
MsG0280008114.01.T03 | MTR_8g085220 | 35.526 | 152 | 88 | 5 | 14 | 157 | 25 | 174 | 1.72e-20 | 89.4 |
MsG0280008114.01.T03 | MTR_4g068950 | 27.979 | 193 | 119 | 8 | 2 | 180 | 14 | 200 | 1.58e-19 | 84.0 |
MsG0280008114.01.T04 | MTR_2g035820 | 96.124 | 129 | 5 | 0 | 1 | 129 | 1 | 129 | 1.09e-89 | 260 |
MsG0280008114.01.T04 | MTR_0003s0620 | 51.938 | 129 | 61 | 1 | 2 | 130 | 7 | 134 | 1.31e-43 | 140 |
MsG0280008114.01.T04 | MTR_0003s0620 | 47.287 | 129 | 67 | 1 | 2 | 130 | 7 | 134 | 4.36e-38 | 128 |
MsG0280008114.01.T04 | MTR_8g085220 | 38.333 | 120 | 64 | 5 | 14 | 125 | 25 | 142 | 4.21e-19 | 82.4 |
MsG0280008114.01.T04 | MTR_8g085220 | 38.333 | 120 | 64 | 5 | 14 | 125 | 25 | 142 | 4.21e-19 | 82.4 |
MsG0280008114.01.T02 | MTR_2g035820 | 98.684 | 228 | 3 | 0 | 1 | 228 | 1 | 228 | 6.19e-170 | 467 |
MsG0280008114.01.T02 | MTR_0003s0620 | 51.049 | 143 | 69 | 1 | 2 | 144 | 7 | 148 | 9.05e-48 | 154 |
MsG0280008114.01.T02 | MTR_0003s0620 | 37.168 | 226 | 98 | 3 | 2 | 227 | 7 | 188 | 1.09e-42 | 143 |
MsG0280008114.01.T02 | MTR_8g085220 | 35.526 | 152 | 88 | 5 | 14 | 157 | 25 | 174 | 2.04e-20 | 89.7 |
MsG0280008114.01.T02 | MTR_8g085220 | 35.526 | 152 | 88 | 5 | 14 | 157 | 25 | 174 | 2.23e-20 | 89.7 |
MsG0280008114.01.T02 | MTR_4g068950 | 27.174 | 184 | 120 | 6 | 3 | 175 | 15 | 195 | 2.63e-19 | 84.0 |
MsG0280008114.01.T01 | MTR_2g035820 | 99.153 | 236 | 2 | 0 | 1 | 236 | 1 | 236 | 5.49e-177 | 485 |
MsG0280008114.01.T01 | MTR_0003s0620 | 51.049 | 143 | 69 | 1 | 2 | 144 | 7 | 148 | 9.05e-48 | 155 |
MsG0280008114.01.T01 | MTR_0003s0620 | 36.207 | 232 | 104 | 3 | 2 | 233 | 7 | 194 | 2.89e-42 | 142 |
MsG0280008114.01.T01 | MTR_8g085220 | 35.526 | 152 | 88 | 5 | 14 | 157 | 25 | 174 | 1.52e-20 | 90.5 |
MsG0280008114.01.T01 | MTR_8g085220 | 35.526 | 152 | 88 | 5 | 14 | 157 | 25 | 174 | 1.58e-20 | 90.5 |
MsG0280008114.01.T01 | MTR_4g068950 | 27.174 | 184 | 120 | 6 | 3 | 175 | 15 | 195 | 3.20e-19 | 84.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280008114.01.T03 | AT3G17365 | 74.725 | 182 | 42 | 3 | 1 | 179 | 1 | 181 | 1.06e-97 | 283 |
MsG0280008114.01.T03 | AT3G17365 | 56.364 | 220 | 54 | 6 | 1 | 179 | 1 | 219 | 1.96e-75 | 228 |
MsG0280008114.01.T03 | AT3G60910 | 43.842 | 203 | 108 | 4 | 2 | 201 | 7 | 206 | 1.56e-55 | 177 |
MsG0280008114.01.T03 | AT3G60910 | 44.898 | 147 | 75 | 4 | 58 | 201 | 1 | 144 | 1.30e-37 | 129 |
MsG0280008114.01.T03 | AT4G34360 | 29.189 | 185 | 117 | 7 | 7 | 180 | 14 | 195 | 5.61e-21 | 87.8 |
MsG0280008114.01.T03 | AT2G31740 | 33.758 | 157 | 98 | 5 | 48 | 201 | 72 | 225 | 2.77e-17 | 80.1 |
MsG0280008114.01.T04 | AT3G17365 | 72.868 | 129 | 31 | 3 | 1 | 126 | 1 | 128 | 3.56e-61 | 188 |
MsG0280008114.01.T04 | AT3G17365 | 70.312 | 128 | 34 | 3 | 1 | 125 | 1 | 127 | 5.07e-58 | 181 |
MsG0280008114.01.T04 | AT3G60910 | 48.062 | 129 | 66 | 1 | 2 | 130 | 7 | 134 | 3.16e-40 | 135 |
MsG0280008114.01.T04 | AT3G60910 | 53.425 | 73 | 33 | 1 | 58 | 130 | 1 | 72 | 9.29e-21 | 83.6 |
MsG0280008114.01.T04 | AT4G34360 | 31.148 | 122 | 79 | 4 | 7 | 126 | 14 | 132 | 3.98e-14 | 67.0 |
MsG0280008114.01.T04 | AT2G31740 | 32.787 | 122 | 70 | 5 | 14 | 125 | 29 | 148 | 8.49e-14 | 67.4 |
MsG0280008114.01.T02 | AT3G17365 | 71.179 | 229 | 62 | 3 | 1 | 226 | 1 | 228 | 1.97e-121 | 345 |
MsG0280008114.01.T02 | AT3G17365 | 56.554 | 267 | 74 | 6 | 1 | 226 | 1 | 266 | 1.22e-99 | 291 |
MsG0280008114.01.T02 | AT3G60910 | 41.667 | 228 | 129 | 3 | 2 | 226 | 7 | 233 | 1.20e-62 | 196 |
MsG0280008114.01.T02 | AT3G60910 | 41.860 | 172 | 96 | 3 | 58 | 226 | 1 | 171 | 1.94e-43 | 145 |
MsG0280008114.01.T02 | AT4G34360 | 28.804 | 184 | 117 | 7 | 7 | 179 | 14 | 194 | 5.34e-20 | 85.9 |
MsG0280008114.01.T02 | AT2G31740 | 31.551 | 187 | 113 | 7 | 14 | 188 | 29 | 212 | 4.40e-17 | 80.1 |
MsG0280008114.01.T01 | AT3G17365 | 69.038 | 239 | 70 | 3 | 1 | 236 | 1 | 238 | 1.38e-122 | 348 |
MsG0280008114.01.T01 | AT3G17365 | 55.235 | 277 | 82 | 6 | 1 | 236 | 1 | 276 | 9.86e-101 | 294 |
MsG0280008114.01.T01 | AT3G60910 | 41.485 | 229 | 130 | 3 | 2 | 227 | 7 | 234 | 8.57e-63 | 197 |
MsG0280008114.01.T01 | AT3G60910 | 41.618 | 173 | 97 | 3 | 58 | 227 | 1 | 172 | 1.46e-43 | 145 |
MsG0280008114.01.T01 | AT4G34360 | 29.444 | 180 | 113 | 7 | 7 | 175 | 14 | 190 | 5.26e-20 | 85.9 |
MsG0280008114.01.T01 | AT2G31740 | 31.551 | 187 | 113 | 7 | 14 | 188 | 29 | 212 | 3.48e-17 | 80.5 |
Find 18 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCATCATTATTAAGTGGAAT+AGG | 0.346132 | 2:+25604211 | None:intergenic |
TAGTGCAAATGTATATATAA+TGG | 0.365312 | 2:+25604149 | None:intergenic |
AGGAACTCTTGATTCTATCT+TGG | 0.371492 | 2:-25605004 | MsG0280008114.01.T01:intron |
CCTATTCCACTTAATAATGA+TGG | 0.448893 | 2:-25604211 | MsG0280008114.01.T01:CDS |
GAGCTTCCATCATTATTAAG+TGG | 0.453928 | 2:+25604205 | None:intergenic |
AGCAAACGTAAGCGATATAG+TGG | 0.489409 | 2:+25604579 | None:intergenic |
ACAATTAAACTCCATGTGAT+AGG | 0.491672 | 2:-25604537 | MsG0280008114.01.T01:intron |
GAACCATGCATGTGTTAACT+TGG | 0.497167 | 2:+25604478 | None:intergenic |
ATGTATATATAATGGACATC+GGG | 0.504347 | 2:+25604157 | None:intergenic |
TTATATATACATTTGCACTA+AGG | 0.515855 | 2:-25604146 | MsG0280008114.01.T01:intron |
TTAAACTCCATGTGATAGGT+TGG | 0.523112 | 2:-25604533 | MsG0280008114.01.T01:intron |
AAAATCTGATAATCCACTCT+GGG | 0.552145 | 2:-25604245 | MsG0280008114.01.T01:CDS |
GTGCCAAGTTAACACATGCA+TGG | 0.582071 | 2:-25604481 | MsG0280008114.01.T01:intron |
AATGTATATATAATGGACAT+CGG | 0.584034 | 2:+25604156 | None:intergenic |
TGCTACGTGATTCATGCTCG+TGG | 0.598791 | 2:-25604560 | MsG0280008114.01.T01:CDS |
AGCTCTGTGGATGAAACTCT+AGG | 0.634808 | 2:-25604187 | MsG0280008114.01.T01:CDS |
TAATAATGATGGAAGCTCTG+TGG | 0.664960 | 2:-25604200 | MsG0280008114.01.T01:CDS |
ATTTAAACCAACCTATCACA+TGG | 0.671256 | 2:+25604526 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTAGTAAATAACTATAATT+AGG | - | Chr2:25603463-25603482 | MsG0280008114.01.T01:intron | 10.0% |
!!! | AAATGTTTTTTTTAGAAAAA+TGG | + | Chr2:25604113-25604132 | None:intergenic | 10.0% |
!! | AACTGAATAATTTAAAAACA+TGG | + | Chr2:25602869-25602888 | None:intergenic | 15.0% |
!! | ATAAATATGATTCTCATATA+TGG | - | Chr2:25604811-25604830 | MsG0280008114.01.T01:intron | 15.0% |
!! | ATTATATTTATAGAGAATTG+TGG | - | Chr2:25602908-25602927 | MsG0280008114.01.T01:intron | 15.0% |
!! | GTACAGAAATATTTATATTA+TGG | - | Chr2:25603107-25603126 | MsG0280008114.01.T01:intron | 15.0% |
!! | GTCAACAATATTAATAAAAT+GGG | - | Chr2:25605396-25605415 | MsG0280008114.01.T01:intron | 15.0% |
!! | TGTCAACAATATTAATAAAA+TGG | - | Chr2:25605395-25605414 | MsG0280008114.01.T01:intron | 15.0% |
!!! | AAAAAAATTAGTTTCCTAAT+AGG | - | Chr2:25604914-25604933 | MsG0280008114.01.T01:intron | 15.0% |
!!! | ATGTTTTTAAATTATTCAGT+TGG | - | Chr2:25602868-25602887 | MsG0280008114.01.T01:intron | 15.0% |
!!! | TTTTATTATTCTACATTCAA+GGG | + | Chr2:25604618-25604637 | None:intergenic | 15.0% |
!! | AAATATTTATATTATGGCTC+AGG | - | Chr2:25603113-25603132 | MsG0280008114.01.T01:intron | 20.0% |
!! | AACATGAATTAATCAACATA+AGG | + | Chr2:25602841-25602860 | None:intergenic | 20.0% |
!! | AATATTAATAAAATGGGAGA+AGG | - | Chr2:25605402-25605421 | MsG0280008114.01.T01:intron | 20.0% |
!! | ATATGAATCTATGAATGAAT+GGG | + | Chr2:25603437-25603456 | None:intergenic | 20.0% |
!! | ATTTGAATTATTAATCGTCA+TGG | - | Chr2:25606152-25606171 | MsG0280008114.01.T01:CDS | 20.0% |
!! | CAAATGAAAAAGAATAAATG+GGG | + | Chr2:25602585-25602604 | None:intergenic | 20.0% |
!! | CCAAATGAAAAAGAATAAAT+GGG | + | Chr2:25602586-25602605 | None:intergenic | 20.0% |
!! | CGATTAATAATTCAAATTAG+CGG | + | Chr2:25606149-25606168 | None:intergenic | 20.0% |
!! | TAGTGCAAATGTATATATAA+TGG | + | Chr2:25604393-25604412 | None:intergenic | 20.0% |
!! | TATATGAATCTATGAATGAA+TGG | + | Chr2:25603438-25603457 | None:intergenic | 20.0% |
!! | TGAGAATCATATTTATGATT+CGG | + | Chr2:25604807-25604826 | None:intergenic | 20.0% |
!! | TTATATATACATTTGCACTA+AGG | - | Chr2:25604393-25604412 | MsG0280008114.01.T01:intron | 20.0% |
!! | TTTGATATAACATCGAAAAT+TGG | + | Chr2:25603239-25603258 | None:intergenic | 20.0% |
!!! | AAAATCTTTTTCTCTCTAAA+AGG | + | Chr2:25605590-25605609 | None:intergenic | 20.0% |
!!! | AATGTATATATAATGGACAT+CGG | + | Chr2:25604386-25604405 | None:intergenic | 20.0% |
!!! | ACAATGAAGATTTTAAAACA+AGG | + | Chr2:25603152-25603171 | None:intergenic | 20.0% |
!!! | ACTGTTTAATTTTGTTTTTC+AGG | - | Chr2:25603515-25603534 | MsG0280008114.01.T01:intron | 20.0% |
!!! | AGAATTTCTTTTATAAAGAG+AGG | + | Chr2:25605824-25605843 | None:intergenic | 20.0% |
!!! | CCATTTATTCTTTTTCATTT+GGG | - | Chr2:25602584-25602603 | MsG0280008114.01.T01:intron | 20.0% |
!!! | GAATTTCTTTTATAAAGAGA+GGG | + | Chr2:25605823-25605842 | None:intergenic | 20.0% |
!!! | GTTTTATTATTCTACATTCA+AGG | + | Chr2:25604619-25604638 | None:intergenic | 20.0% |
!!! | TTCAGTTTTCTATTTTCTAT+CGG | + | Chr2:25605622-25605641 | None:intergenic | 20.0% |
!!! | TTTAAGATTTACTTTTGACT+TGG | - | Chr2:25605500-25605519 | MsG0280008114.01.T01:intron | 20.0% |
!!! | TTTATAAATTTTTGCTGAAG+TGG | - | Chr2:25603281-25603300 | MsG0280008114.01.T01:intron | 20.0% |
! | AATACTTCAAAGTGTATGTA+TGG | - | Chr2:25602958-25602977 | MsG0280008114.01.T01:intron | 25.0% |
! | ATCTTCAAAAAAGAATCTAG+TGG | + | Chr2:25604642-25604661 | None:intergenic | 25.0% |
! | CAAAAAATGGCAATAATAAG+AGG | + | Chr2:25604039-25604058 | None:intergenic | 25.0% |
! | CCCAAATGAAAAAGAATAAA+TGG | + | Chr2:25602587-25602606 | None:intergenic | 25.0% |
! | GAGTAAATCTGAATACAAAT+CGG | + | Chr2:25603859-25603878 | None:intergenic | 25.0% |
! | TAACATTGATATATCTTCTG+TGG | - | Chr2:25602763-25602782 | MsG0280008114.01.T01:intron | 25.0% |
! | TAGTTAGACAGATTTGAAAA+TGG | - | Chr2:25603346-25603365 | MsG0280008114.01.T01:intron | 25.0% |
! | TCAAATCTGTCTAACTATTA+AGG | + | Chr2:25603343-25603362 | None:intergenic | 25.0% |
! | TCATCTTGTTGAAAATACTT+AGG | - | Chr2:25606010-25606029 | MsG0280008114.01.T01:intron | 25.0% |
! | TCTTCAAAAAAGAATCTAGT+GGG | + | Chr2:25604641-25604660 | None:intergenic | 25.0% |
! | TTAAGATCTTTGTAACTGTT+TGG | + | Chr2:25602316-25602335 | None:intergenic | 25.0% |
! | TTAGTCACTAAAAGCAAATT+TGG | - | Chr2:25605264-25605283 | MsG0280008114.01.T01:intron | 25.0% |
! | TTATAAAGGAACACGTAAAT+AGG | + | Chr2:25604149-25604168 | None:intergenic | 25.0% |
! | TTCAACTAGATTATCAACAA+TGG | + | Chr2:25605370-25605389 | None:intergenic | 25.0% |
!! | GTACCAAAAGTATATTACTT+TGG | - | Chr2:25602428-25602447 | MsG0280008114.01.T01:intron | 25.0% |
!! | TTACTCTTCTTTTATGTTCT+TGG | - | Chr2:25604437-25604456 | MsG0280008114.01.T01:intron | 25.0% |
!! | TTTATAAATTTGCTCCTCTT+CGG | - | Chr2:25604162-25604181 | MsG0280008114.01.T01:CDS | 25.0% |
!!! | AACTTTGTTGGCTATTTTAT+AGG | + | Chr2:25604974-25604993 | None:intergenic | 25.0% |
!!! | ACAGAATGATTAGTCTAAAT+AGG | + | Chr2:25606230-25606249 | None:intergenic | 25.0% |
!!! | ATATTTTTGTTGTACTAGTG+TGG | - | Chr2:25603619-25603638 | MsG0280008114.01.T01:intron | 25.0% |
!!! | ATGTATATATAATGGACATC+GGG | + | Chr2:25604385-25604404 | None:intergenic | 25.0% |
!!! | CCCATTTATTCTTTTTCATT+TGG | - | Chr2:25602583-25602602 | MsG0280008114.01.T01:intron | 25.0% |
!!! | TAGTATTTCTAGTGTGATTT+TGG | - | Chr2:25603009-25603028 | MsG0280008114.01.T01:intron | 25.0% |
!!! | TTTGCATTTTTTACTACGAT+GGG | - | Chr2:25605448-25605467 | MsG0280008114.01.T01:intron | 25.0% |
!!! | TTTTTCTCTCTAAAAGGTAT+TGG | + | Chr2:25605584-25605603 | None:intergenic | 25.0% |
AAAAATCTGATAATCCACTC+TGG | - | Chr2:25604293-25604312 | MsG0280008114.01.T01:intron | 30.0% | |
AAAAGACGTGTTTCATCTAT+TGG | + | Chr2:25603883-25603902 | None:intergenic | 30.0% | |
AAAATCTGATAATCCACTCT+GGG | - | Chr2:25604294-25604313 | MsG0280008114.01.T01:intron | 30.0% | |
AAGAAATTCTCCTAAACTTC+AGG | - | Chr2:25605834-25605853 | MsG0280008114.01.T01:intron | 30.0% | |
AAGATAAGCATAATGAAGAG+TGG | + | Chr2:25604844-25604863 | None:intergenic | 30.0% | |
AATCCAAAACAAAACAGAAG+TGG | + | Chr2:25603732-25603751 | None:intergenic | 30.0% | |
ACAATTAAACTCCATGTGAT+AGG | - | Chr2:25604002-25604021 | MsG0280008114.01.T01:intron | 30.0% | |
AGAAATTCTCCTAAACTTCA+GGG | - | Chr2:25605835-25605854 | MsG0280008114.01.T01:intron | 30.0% | |
ATAAGGATACACTTCAATTG+AGG | + | Chr2:25602824-25602843 | None:intergenic | 30.0% | |
ATAATTCAAATTAGCGGCAA+TGG | + | Chr2:25606143-25606162 | None:intergenic | 30.0% | |
ATAGATTGATTGGAAACTCA+CGG | + | Chr2:25605215-25605234 | None:intergenic | 30.0% | |
ATCTTAAGAACAAACAGTGA+TGG | - | Chr2:25602329-25602348 | MsG0280008114.01.T01:intron | 30.0% | |
ATGAAAAAGAATAAATGGGG+TGG | + | Chr2:25602582-25602601 | None:intergenic | 30.0% | |
ATTGCTATGATATCAAGGTT+TGG | + | Chr2:25604743-25604762 | None:intergenic | 30.0% | |
ATTTAAACCAACCTATCACA+TGG | + | Chr2:25604016-25604035 | None:intergenic | 30.0% | |
ATTTCTGTACATGTTTAGCT+TGG | + | Chr2:25603097-25603116 | None:intergenic | 30.0% | |
CCATCATTATTAAGTGGAAT+AGG | + | Chr2:25604331-25604350 | None:intergenic | 30.0% | |
CCTATTCCACTTAATAATGA+TGG | - | Chr2:25604328-25604347 | MsG0280008114.01.T01:intron | 30.0% | |
GAAGAGGAGCAAATTTATAA+AGG | + | Chr2:25604163-25604182 | None:intergenic | 30.0% | |
GCTTGTTCTTATAGATTGAT+TGG | + | Chr2:25605225-25605244 | None:intergenic | 30.0% | |
GTATTTGTGATCACGATATA+AGG | + | Chr2:25602943-25602962 | None:intergenic | 30.0% | |
GTGGAAGGAATCAAATAATA+AGG | + | Chr2:25605101-25605120 | None:intergenic | 30.0% | |
TAATTCAAATTAGCGGCAAT+GGG | + | Chr2:25606142-25606161 | None:intergenic | 30.0% | |
TCACTAAAAGCAAATTTGGT+TGG | - | Chr2:25605268-25605287 | MsG0280008114.01.T01:intron | 30.0% | |
TCATAAATTGTACCAAACGA+AGG | - | Chr2:25604519-25604538 | MsG0280008114.01.T01:intron | 30.0% | |
TGTGCATTAATGACTGATAA+TGG | - | Chr2:25605649-25605668 | MsG0280008114.01.T01:intron | 30.0% | |
TTAGACAACACTCACAAAAA+AGG | + | Chr2:25604499-25604518 | None:intergenic | 30.0% | |
TTGCATGAATTAGAAAGTCA+TGG | + | Chr2:25605050-25605069 | None:intergenic | 30.0% | |
TTTAATCAGTGTCATGTAGA+TGG | - | Chr2:25605151-25605170 | MsG0280008114.01.T01:CDS | 30.0% | |
! | AACTATGGACTTTTTGTTCA+TGG | + | Chr2:25603704-25603723 | None:intergenic | 30.0% |
! | GAGCCAAAGTAATATACTTT+TGG | + | Chr2:25602434-25602453 | None:intergenic | 30.0% |
! | GATTTTCCACTTCAAATTTG+CGG | + | Chr2:25604596-25604615 | None:intergenic | 30.0% |
! | GTAGTTTCATCCAAATGTTT+TGG | - | Chr2:25604866-25604885 | MsG0280008114.01.T01:intron | 30.0% |
! | TACTTTTGGTACCAATCAAA+AGG | + | Chr2:25602420-25602439 | None:intergenic | 30.0% |
! | TGTTAACTTGGCACAAAAAA+TGG | + | Chr2:25604052-25604071 | None:intergenic | 30.0% |
! | TTCTTTTATAAAGAGAGGGA+AGG | + | Chr2:25605819-25605838 | None:intergenic | 30.0% |
! | TTTGACTAGATGCATTTTGA+AGG | + | Chr2:25604896-25604915 | None:intergenic | 30.0% |
!! | TGATTAGTCTAAATAGGCAA+AGG | + | Chr2:25606224-25606243 | None:intergenic | 30.0% |
!! | TTTGGTTCTGTTATTGACAA+AGG | - | Chr2:25603404-25603423 | MsG0280008114.01.T01:intron | 30.0% |
!!! | CTTTGCATTTTTTACTACGA+TGG | - | Chr2:25605447-25605466 | MsG0280008114.01.T01:intron | 30.0% |
!!! | TTACCACTTCTGTTTTGTTT+TGG | - | Chr2:25603726-25603745 | MsG0280008114.01.T01:intron | 30.0% |
!!! | TTGCATTTTTTACTACGATG+GGG | - | Chr2:25605449-25605468 | MsG0280008114.01.T01:intron | 30.0% |
AACCAACAACAAGGATAGAT+TGG | + | Chr2:25602485-25602504 | None:intergenic | 35.0% | |
AATTACCAGAACCAACAACA+AGG | + | Chr2:25602494-25602513 | None:intergenic | 35.0% | |
ACAGAAGTGGTAAAGAACTA+TGG | + | Chr2:25603719-25603738 | None:intergenic | 35.0% | |
ACGTAAATAGGATGCTTCAA+AGG | + | Chr2:25604137-25604156 | None:intergenic | 35.0% | |
ACTCCAGATATGATTGAACT+AGG | + | Chr2:25604211-25604230 | None:intergenic | 35.0% | |
AGAACAATTCATTGCTCAAC+AGG | + | Chr2:25603492-25603511 | None:intergenic | 35.0% | |
AGAAGAAGCTGAAGGAATAA+AGG | + | Chr2:25605874-25605893 | None:intergenic | 35.0% | |
AGGAACTCTTGATTCTATCT+TGG | - | Chr2:25603535-25603554 | MsG0280008114.01.T01:intron | 35.0% | |
ATGAGATGTGTTCCCTATTA+TGG | + | Chr2:25605014-25605033 | None:intergenic | 35.0% | |
ATGTGGGCATGTAAATTTCA+AGG | - | Chr2:25602661-25602680 | MsG0280008114.01.T01:intron | 35.0% | |
ATGTTCTTGGTCAATAGTGT+TGG | - | Chr2:25604450-25604469 | MsG0280008114.01.T01:intron | 35.0% | |
ATTTGCGGATTTCCCATAAT+AGG | - | Chr2:25604998-25605017 | MsG0280008114.01.T01:intron | 35.0% | |
CCAACAAAGTTATGCATTTG+CGG | - | Chr2:25604983-25605002 | MsG0280008114.01.T01:intron | 35.0% | |
CGTAAATAGGATGCTTCAAA+GGG | + | Chr2:25604136-25604155 | None:intergenic | 35.0% | |
CTAAGATGCTTGAGGAAATT+TGG | - | Chr2:25603665-25603684 | MsG0280008114.01.T01:intron | 35.0% | |
CTGAAGGAATAAAGGTTGTT+AGG | + | Chr2:25605866-25605885 | None:intergenic | 35.0% | |
GAATACAAATCGGTACTAAG+AGG | + | Chr2:25603849-25603868 | None:intergenic | 35.0% | |
GAGCTTCCATCATTATTAAG+TGG | + | Chr2:25604337-25604356 | None:intergenic | 35.0% | |
GCACAATTGCTATGATATCA+AGG | + | Chr2:25604748-25604767 | None:intergenic | 35.0% | |
GGGAACAAATGAAAACTGAA+TGG | + | Chr2:25606122-25606141 | None:intergenic | 35.0% | |
GGTGAATATAATGTACCTCT+AGG | - | Chr2:25605172-25605191 | MsG0280008114.01.T01:CDS | 35.0% | |
GTCATCAACTGCTTCAATAA+TGG | + | Chr2:25603777-25603796 | None:intergenic | 35.0% | |
GTTGCATGTTAAGCTTAGAA+GGG | + | Chr2:25605341-25605360 | None:intergenic | 35.0% | |
TACTAAGAGGTTTAGTTACC+AGG | + | Chr2:25603836-25603855 | None:intergenic | 35.0% | |
TAGAAATACTACTGCAATCC+TGG | + | Chr2:25603000-25603019 | None:intergenic | 35.0% | |
TAGGATATACCCTGAAGTTT+AGG | + | Chr2:25605847-25605866 | None:intergenic | 35.0% | |
TCCTCTTCGGTCAAATATAT+AGG | - | Chr2:25604175-25604194 | MsG0280008114.01.T01:CDS | 35.0% | |
TCTGTTAGTATCTTTCTGAC+AGG | - | Chr2:25606245-25606264 | MsG0280008114.01.T01:five_prime_UTR | 35.0% | |
TGAATGCGTGCAAAAATTTC+AGG | - | Chr2:25603923-25603942 | MsG0280008114.01.T01:intron | 35.0% | |
TGAGATGTGTTCCCTATTAT+GGG | + | Chr2:25605013-25605032 | None:intergenic | 35.0% | |
TTAAACTCCATGTGATAGGT+TGG | - | Chr2:25604006-25604025 | MsG0280008114.01.T01:intron | 35.0% | |
TTGCCTAGTTCAATCATATC+TGG | - | Chr2:25604205-25604224 | MsG0280008114.01.T01:CDS | 35.0% | |
TTTGCGGATTTCCCATAATA+GGG | - | Chr2:25604999-25605018 | MsG0280008114.01.T01:intron | 35.0% | |
! | AACAAGGATAGATTGGTTCT+TGG | + | Chr2:25602478-25602497 | None:intergenic | 35.0% |
! | AACCAATCTATCCTTGTTGT+TGG | - | Chr2:25602480-25602499 | MsG0280008114.01.T01:intron | 35.0% |
! | AAGAAACTGATAGAGCATCA+GGG | + | Chr2:25605962-25605981 | None:intergenic | 35.0% |
! | AAGACTAACAGTTTGCTCAT+TGG | - | Chr2:25603596-25603615 | MsG0280008114.01.T01:intron | 35.0% |
! | ACAAGGATAGATTGGTTCTT+GGG | + | Chr2:25602477-25602496 | None:intergenic | 35.0% |
! | CAAAAATTTCAGGTGACGTA+TGG | - | Chr2:25603933-25603952 | MsG0280008114.01.T01:intron | 35.0% |
! | TAATAATGATGGAAGCTCTG+TGG | - | Chr2:25604339-25604358 | MsG0280008114.01.T01:intron | 35.0% |
! | TCTTTTGCATTTCGCCTAAT+CGG | - | Chr2:25603897-25603916 | MsG0280008114.01.T01:intron | 35.0% |
! | TGATGATAGTGATGTTCTTG+AGG | - | Chr2:25603308-25603327 | MsG0280008114.01.T01:intron | 35.0% |
!! | TTGTTTAAGTTGCCTTCGTT+TGG | + | Chr2:25604534-25604553 | None:intergenic | 35.0% |
!!! | TGCATTTTTTACTACGATGG+GGG | - | Chr2:25605450-25605469 | MsG0280008114.01.T01:intron | 35.0% |
!!! | TTTTTTGAAGATAGCCAGTG+AGG | - | Chr2:25604650-25604669 | MsG0280008114.01.T01:intron | 35.0% |
AACCGTTACACAAATGAACC+TGG | - | Chr2:25602393-25602412 | MsG0280008114.01.T01:intron | 40.0% | |
AAGGTTGTAGAAGAAGCTGA+AGG | + | Chr2:25605882-25605901 | None:intergenic | 40.0% | |
ACACTAGTGCAGTTTCAAGA+AGG | + | Chr2:25605901-25605920 | None:intergenic | 40.0% | |
ACATGCTACTAAGATGCTTG+AGG | - | Chr2:25603657-25603676 | MsG0280008114.01.T01:intron | 40.0% | |
ACTTCAATTGAGGACGATCT+CGG | + | Chr2:25602814-25602833 | None:intergenic | 40.0% | |
AGATGCTTGAGGAAATTTGG+AGG | - | Chr2:25603668-25603687 | MsG0280008114.01.T01:intron | 40.0% | |
AGATTGCCGCAAATTTGAAG+TGG | - | Chr2:25604587-25604606 | MsG0280008114.01.T01:CDS | 40.0% | |
AGCAAACGTAAGCGATATAG+TGG | + | Chr2:25603963-25603982 | None:intergenic | 40.0% | |
ATTGATTGGAAACTCACGGA+TGG | + | Chr2:25605211-25605230 | None:intergenic | 40.0% | |
CCGCAAATGCATAACTTTGT+TGG | + | Chr2:25604986-25605005 | None:intergenic | 40.0% | |
CGTTGCATGTTAAGCTTAGA+AGG | + | Chr2:25605342-25605361 | None:intergenic | 40.0% | |
CTAAGCTTAACATGCAACGA+AGG | - | Chr2:25605343-25605362 | MsG0280008114.01.T01:intron | 40.0% | |
CTTGAAGCTCTTTACAATGG+TGG | - | Chr2:25605677-25605696 | MsG0280008114.01.T01:intron | 40.0% | |
GAAACTGCACTAGTGTGAAT+TGG | - | Chr2:25605905-25605924 | MsG0280008114.01.T01:intron | 40.0% | |
GAACCATGCATGTGTTAACT+TGG | + | Chr2:25604064-25604083 | None:intergenic | 40.0% | |
GACCAGGTTCATTTGTGTAA+CGG | + | Chr2:25602398-25602417 | None:intergenic | 40.0% | |
GAGCTTGAAGCTCTTTACAA+TGG | - | Chr2:25605674-25605693 | MsG0280008114.01.T01:intron | 40.0% | |
GCCTATATATTTGACCGAAG+AGG | + | Chr2:25604179-25604198 | None:intergenic | 40.0% | |
GGTTCTACATATGTTCCTAG+AGG | + | Chr2:25605190-25605209 | None:intergenic | 40.0% | |
GTCTCAAAATTCTCTCCCTA+AGG | - | Chr2:25604773-25604792 | MsG0280008114.01.T01:intron | 40.0% | |
TATAGGGTTCTCAAGGCTAA+AGG | - | Chr2:25603801-25603820 | MsG0280008114.01.T01:intron | 40.0% | |
TCAAGTAAGTCCTCCTAAGT+AGG | + | Chr2:25604691-25604710 | None:intergenic | 40.0% | |
TGAAGAATCACTCGCCTATT+AGG | + | Chr2:25604931-25604950 | None:intergenic | 40.0% | |
TGAAGGAGAGCCAAAACATT+TGG | + | Chr2:25604879-25604898 | None:intergenic | 40.0% | |
TTATTTGCAGCGTTCAGTCA+AGG | - | Chr2:25602707-25602726 | MsG0280008114.01.T01:intron | 40.0% | |
! | ATGAACCTGGTCCTTTTGAT+TGG | - | Chr2:25602406-25602425 | MsG0280008114.01.T01:intron | 40.0% |
! | GAAGAAACTGATAGAGCATC+AGG | + | Chr2:25605963-25605982 | None:intergenic | 40.0% |
! | GCTTTTGCATCAGAGACTTT+TGG | - | Chr2:25603386-25603405 | MsG0280008114.01.T01:intron | 40.0% |
! | GGCACATAGAGATTGATGAT+AGG | + | Chr2:25602456-25602475 | None:intergenic | 40.0% |
! | TATATTATGGCTCAGGTTGC+AGG | - | Chr2:25603120-25603139 | MsG0280008114.01.T01:intron | 40.0% |
!! | AGCAGTTGATGACACACTAT+AGG | - | Chr2:25603784-25603803 | MsG0280008114.01.T01:intron | 40.0% |
!! | AGTCAAGGTATGGTTGATGA+AGG | - | Chr2:25602722-25602741 | MsG0280008114.01.T01:intron | 40.0% |
!! | GATTCGGTGAAATTGCCTTA+GGG | + | Chr2:25604791-25604810 | None:intergenic | 40.0% |
!! | GCAGTTGATGACACACTATA+GGG | - | Chr2:25603785-25603804 | MsG0280008114.01.T01:intron | 40.0% |
!! | GTTGTTGGTTCTGGTAATTC+AGG | - | Chr2:25602495-25602514 | MsG0280008114.01.T01:intron | 40.0% |
!! | TCTATCCTTGTTGTTGGTTC+TGG | - | Chr2:25602486-25602505 | MsG0280008114.01.T01:intron | 40.0% |
!! | TCTGTACATGTTTAGCTTGG+TGG | + | Chr2:25603094-25603113 | None:intergenic | 40.0% |
!! | TGATTCGGTGAAATTGCCTT+AGG | + | Chr2:25604792-25604811 | None:intergenic | 40.0% |
AGCTCTGTGGATGAAACTCT+AGG | - | Chr2:25604352-25604371 | MsG0280008114.01.T01:intron | 45.0% | |
ATACGGCGAATCATGGTACT+GGG | - | Chr2:25602368-25602387 | MsG0280008114.01.T01:intron | 45.0% | |
CGAGTCACTTCACTTATGAG+AGG | + | Chr2:25605765-25605784 | None:intergenic | 45.0% | |
CTCGAGAGAGAAAGCAAGAA+CGG | + | Chr2:25605552-25605571 | None:intergenic | 45.0% | |
CTCTGCACATATCACAGTAG+TGG | + | Chr2:25604257-25604276 | None:intergenic | 45.0% | |
CTTATGAGAGGATCTCTCTC+TGG | + | Chr2:25605753-25605772 | None:intergenic | 45.0% | |
GAACAAACAGTGATGGCAAC+AGG | - | Chr2:25602336-25602355 | MsG0280008114.01.T01:intron | 45.0% | |
GACACACTATAGGGTTCTCA+AGG | - | Chr2:25603794-25603813 | MsG0280008114.01.T01:intron | 45.0% | |
GCAACAGGTACACAAGCATA+CGG | - | Chr2:25602351-25602370 | MsG0280008114.01.T01:intron | 45.0% | |
GGCTAAAGGAGTCTATATCC+TGG | - | Chr2:25603815-25603834 | MsG0280008114.01.T01:intron | 45.0% | |
GTGCCAAGTTAACACATGCA+TGG | - | Chr2:25604058-25604077 | MsG0280008114.01.T01:intron | 45.0% | |
TCACTCCTACAGTCCTACTT+AGG | - | Chr2:25604675-25604694 | MsG0280008114.01.T01:intron | 45.0% | |
TCGAGAGAGAAAGCAAGAAC+GGG | + | Chr2:25605551-25605570 | None:intergenic | 45.0% | |
TCTTGGCGTTCTTAGAACTC+TGG | + | Chr2:25605730-25605749 | None:intergenic | 45.0% | |
TGGTACCAATCAAAAGGACC+AGG | + | Chr2:25602414-25602433 | None:intergenic | 45.0% | |
TGGTCTCATTTGAGTCGTGA+CGG | + | Chr2:25604723-25604742 | None:intergenic | 45.0% | |
TGTGAATTGGACCCGATGAT+GGG | - | Chr2:25605918-25605937 | MsG0280008114.01.T01:intron | 45.0% | |
TTAAGACGACGTTCGTGTAG+TGG | + | Chr2:25605120-25605139 | None:intergenic | 45.0% | |
! | CACCTTTTGCGTATGCATGT+GGG | - | Chr2:25602645-25602664 | MsG0280008114.01.T01:intron | 45.0% |
! | GGATTCACAGTGATTTTGCC+AGG | - | Chr2:25602979-25602998 | MsG0280008114.01.T01:intron | 45.0% |
! | TCACCTTTTGCGTATGCATG+TGG | - | Chr2:25602644-25602663 | MsG0280008114.01.T01:intron | 45.0% |
!! | CAAGGTATGGTTGATGAAGG+TGG | - | Chr2:25602725-25602744 | MsG0280008114.01.T01:intron | 45.0% |
!! | GGTTGATGAAGGTGGTTACA+AGG | - | Chr2:25602733-25602752 | MsG0280008114.01.T01:intron | 45.0% |
!! | GTTTAGCTTGGTGGTGAGTT+TGG | + | Chr2:25603085-25603104 | None:intergenic | 45.0% |
AGAGGATCTCTCTCTGGTCT+TGG | + | Chr2:25605747-25605766 | None:intergenic | 50.0% | |
ATCAGGGTCCAGTAAGTGTG+AGG | + | Chr2:25605946-25605965 | None:intergenic | 50.0% | |
CACAAGCATACGGCGAATCA+TGG | - | Chr2:25602361-25602380 | MsG0280008114.01.T01:intron | 50.0% | |
CATACGGCGAATCATGGTAC+TGG | - | Chr2:25602367-25602386 | MsG0280008114.01.T01:intron | 50.0% | |
CTCCTACAGTCCTACTTAGG+AGG | - | Chr2:25604678-25604697 | MsG0280008114.01.T01:intron | 50.0% | |
GCACGCATTCAAGACCGATT+AGG | + | Chr2:25603914-25603933 | None:intergenic | 50.0% | |
GGTCTCATTTGAGTCGTGAC+GGG | + | Chr2:25604722-25604741 | None:intergenic | 50.0% | |
GTCCTCCTAAGTAGGACTGT+AGG | + | Chr2:25604683-25604702 | None:intergenic | 50.0% | |
GTCTCATTTGAGTCGTGACG+GGG | + | Chr2:25604721-25604740 | None:intergenic | 50.0% | |
GTGAATTGGACCCGATGATG+GGG | - | Chr2:25605919-25605938 | MsG0280008114.01.T01:intron | 50.0% | |
GTGTGAATTGGACCCGATGA+TGG | - | Chr2:25605917-25605936 | MsG0280008114.01.T01:intron | 50.0% | |
TCAGGGTCCAGTAAGTGTGA+GGG | + | Chr2:25605945-25605964 | None:intergenic | 50.0% | |
TGCAGCGTTCAGTCAAGGTA+TGG | - | Chr2:25602712-25602731 | MsG0280008114.01.T01:intron | 50.0% | |
TGCCCACATGCATACGCAAA+AGG | + | Chr2:25602650-25602669 | None:intergenic | 50.0% | |
TGCTACGTGATTCATGCTCG+TGG | - | Chr2:25603979-25603998 | MsG0280008114.01.T01:intron | 50.0% | |
AAGTGTGAGGGCCCCATCAT+CGG | + | Chr2:25605933-25605952 | None:intergenic | 55.0% | |
CTGTAGGAGTGACACCTCAC+TGG | + | Chr2:25604667-25604686 | None:intergenic | 55.0% | |
! | GACGACGTTCGTGTAGTGGA+AGG | + | Chr2:25605116-25605135 | None:intergenic | 55.0% |
!! | GGTTTTGTCAGCTCCCAGAG+TGG | + | Chr2:25604310-25604329 | None:intergenic | 55.0% |
AGTGTGAGGGCCCCATCATC+GGG | + | Chr2:25605932-25605951 | None:intergenic | 60.0% | |
GATGGGGCCCTCACACTTAC+TGG | - | Chr2:25605935-25605954 | MsG0280008114.01.T01:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 25602262 | 25606299 | 25602262 | ID=MsG0280008114.01;Name=MsG0280008114.01 |
Chr2 | mRNA | 25602262 | 25606299 | 25602262 | ID=MsG0280008114.01.T01;Parent=MsG0280008114.01;Name=MsG0280008114.01.T01;_AED=0.47;_eAED=0.47;_QI=86|1|1|1|0|0.22|9|0|236 |
Chr2 | exon | 25602262 | 25602294 | 25602262 | ID=MsG0280008114.01.T01:exon:14096;Parent=MsG0280008114.01.T01 |
Chr2 | exon | 25604147 | 25604286 | 25604147 | ID=MsG0280008114.01.T01:exon:14095;Parent=MsG0280008114.01.T01 |
Chr2 | five_prime_UTR | 25606214 | 25606299 | 25606214 | ID=MsG0280008114.01.T01:five_prime_utr;Parent=MsG0280008114.01.T01 |
Chr2 | CDS | 25606045 | 25606213 | 25606045 | ID=MsG0280008114.01.T01:cds;Parent=MsG0280008114.01.T01 |
Chr2 | CDS | 25605728 | 25605844 | 25605728 | ID=MsG0280008114.01.T01:cds;Parent=MsG0280008114.01.T01 |
Chr2 | CDS | 25605136 | 25605204 | 25605136 | ID=MsG0280008114.01.T01:cds;Parent=MsG0280008114.01.T01 |
Chr2 | CDS | 25605005 | 25605024 | 25605005 | ID=MsG0280008114.01.T01:cds;Parent=MsG0280008114.01.T01 |
Chr2 | CDS | 25604872 | 25604924 | 25604872 | ID=MsG0280008114.01.T01:cds;Parent=MsG0280008114.01.T01 |
Chr2 | CDS | 25604725 | 25604755 | 25604725 | ID=MsG0280008114.01.T01:cds;Parent=MsG0280008114.01.T01 |
Chr2 | CDS | 25604538 | 25604616 | 25604538 | ID=MsG0280008114.01.T01:cds;Parent=MsG0280008114.01.T01 |
Chr2 | CDS | 25604147 | 25604286 | 25604147 | ID=MsG0280008114.01.T01:cds;Parent=MsG0280008114.01.T01 |
Chr2 | CDS | 25602262 | 25602294 | 25602262 | ID=MsG0280008114.01.T01:cds;Parent=MsG0280008114.01.T01 |
Chr2 | mRNA | 25604135 | 25606299 | 25604135 | ID=MsG0280008114.01.T02;Parent=MsG0280008114.01;Name=MsG0280008114.01.T02;_AED=0.48;_eAED=0.48;_QI=86|1|0.87|1|0|0.25|8|0|229 |
Chr2 | exon | 25604135 | 25604286 | 25604135 | ID=MsG0280008114.01.T02:exon:14097;Parent=MsG0280008114.01.T02 |
Chr2 | five_prime_UTR | 25606214 | 25606299 | 25606214 | ID=MsG0280008114.01.T02:five_prime_utr;Parent=MsG0280008114.01.T02 |
Chr2 | CDS | 25606045 | 25606213 | 25606045 | ID=MsG0280008114.01.T02:cds;Parent=MsG0280008114.01.T02 |
Chr2 | CDS | 25605728 | 25605844 | 25605728 | ID=MsG0280008114.01.T02:cds;Parent=MsG0280008114.01.T02 |
Chr2 | CDS | 25605136 | 25605204 | 25605136 | ID=MsG0280008114.01.T02:cds;Parent=MsG0280008114.01.T02 |
Chr2 | CDS | 25605005 | 25605024 | 25605005 | ID=MsG0280008114.01.T02:cds;Parent=MsG0280008114.01.T02 |
Chr2 | CDS | 25604872 | 25604924 | 25604872 | ID=MsG0280008114.01.T02:cds;Parent=MsG0280008114.01.T02 |
Chr2 | CDS | 25604725 | 25604755 | 25604725 | ID=MsG0280008114.01.T02:cds;Parent=MsG0280008114.01.T02 |
Chr2 | CDS | 25604538 | 25604616 | 25604538 | ID=MsG0280008114.01.T02:cds;Parent=MsG0280008114.01.T02 |
Chr2 | CDS | 25604135 | 25604286 | 25604135 | ID=MsG0280008114.01.T02:cds;Parent=MsG0280008114.01.T02 |
Chr2 | mRNA | 25604461 | 25606299 | 25604461 | ID=MsG0280008114.01.T03;Parent=MsG0280008114.01;Name=MsG0280008114.01.T03;_AED=0.48;_eAED=0.52;_QI=86|1|0.85|1|0|0.14|7|0|204 |
Chr2 | exon | 25604461 | 25604616 | 25604461 | ID=MsG0280008114.01.T03:exon:14098;Parent=MsG0280008114.01.T03 |
Chr2 | five_prime_UTR | 25606214 | 25606299 | 25606214 | ID=MsG0280008114.01.T03:five_prime_utr;Parent=MsG0280008114.01.T03 |
Chr2 | CDS | 25606045 | 25606213 | 25606045 | ID=MsG0280008114.01.T03:cds;Parent=MsG0280008114.01.T03 |
Chr2 | CDS | 25605728 | 25605844 | 25605728 | ID=MsG0280008114.01.T03:cds;Parent=MsG0280008114.01.T03 |
Chr2 | CDS | 25605136 | 25605204 | 25605136 | ID=MsG0280008114.01.T03:cds;Parent=MsG0280008114.01.T03 |
Chr2 | CDS | 25605005 | 25605024 | 25605005 | ID=MsG0280008114.01.T03:cds;Parent=MsG0280008114.01.T03 |
Chr2 | CDS | 25604872 | 25604924 | 25604872 | ID=MsG0280008114.01.T03:cds;Parent=MsG0280008114.01.T03 |
Chr2 | CDS | 25604725 | 25604755 | 25604725 | ID=MsG0280008114.01.T03:cds;Parent=MsG0280008114.01.T03 |
Chr2 | CDS | 25604461 | 25604616 | 25604461 | ID=MsG0280008114.01.T03:cds;Parent=MsG0280008114.01.T03 |
Chr2 | mRNA | 25604984 | 25606299 | 25604984 | ID=MsG0280008114.01.T04;Parent=MsG0280008114.01;Name=MsG0280008114.01.T04;_AED=0.49;_eAED=0.49;_QI=86|1|0.75|1|0|0.25|4|0|131 |
Chr2 | exon | 25604984 | 25605024 | 25604984 | ID=MsG0280008114.01.T04:exon:14099;Parent=MsG0280008114.01.T04 |
Chr2 | five_prime_UTR | 25606214 | 25606299 | 25606214 | ID=MsG0280008114.01.T04:five_prime_utr;Parent=MsG0280008114.01.T04 |
Chr2 | CDS | 25606045 | 25606213 | 25606045 | ID=MsG0280008114.01.T04:cds;Parent=MsG0280008114.01.T04 |
Chr2 | CDS | 25605728 | 25605844 | 25605728 | ID=MsG0280008114.01.T04:cds;Parent=MsG0280008114.01.T04 |
Chr2 | CDS | 25605136 | 25605204 | 25605136 | ID=MsG0280008114.01.T04:cds;Parent=MsG0280008114.01.T04 |
Chr2 | CDS | 25604984 | 25605024 | 25604984 | ID=MsG0280008114.01.T04:cds;Parent=MsG0280008114.01.T04 |
Gene Sequence |
Protein sequence |