Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012192.01.T01 | XP_018459315.1 | 44.868 | 341 | 165 | 7 | 1 | 340 | 1 | 319 | 6.78E-94 | 293 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012192.01.T01 | A0A6J0LGH1 | 44.868 | 341 | 165 | 7 | 1 | 340 | 1 | 319 | 3.24e-94 | 293 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180004486.01 | MsG0380012192.01 | 0.803018 | 4.259368e-49 | 2.117353e-46 |
| MsG0380012192.01 | MsG0380015191.01 | 0.820644 | 6.152571e-53 | 4.895668e-50 |
| MsG0380012192.01 | MsG0680031096.01 | 0.804263 | 2.349125e-49 | 1.205750e-46 |
| MsG0380012192.01 | MsG0780040788.01 | 0.808881 | 2.490476e-50 | 1.440551e-47 |
| MsG0380012192.01 | MsG0880046264.01 | 0.800190 | 1.618727e-48 | 7.489855e-46 |
| MsG0280007556.01 | MsG0380012192.01 | 0.893304 | 7.120346e-75 | 6.746021e-71 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012192.01.T01 | MTR_7g062720 | 40.541 | 148 | 80 | 3 | 1 | 146 | 1 | 142 | 6.41e-32 | 117 |
| MsG0380012192.01.T01 | MTR_4g037355 | 38.686 | 137 | 62 | 3 | 155 | 290 | 1 | 116 | 1.96e-21 | 89.4 |
| MsG0380012192.01.T01 | MTR_5g061150 | 33.333 | 111 | 74 | 0 | 40 | 150 | 26 | 136 | 8.77e-18 | 79.3 |
| MsG0380012192.01.T01 | MTR_4g112730 | 57.971 | 69 | 28 | 1 | 143 | 211 | 2 | 69 | 1.38e-17 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 66 sgRNAs with CRISPR-Local
Find 86 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTCTTATTGCCCTCATTAA+TGG | 0.201947 | 3:-12435424 | MsG0380012192.01.T01:CDS |
| AAAGTTGTGGCGTTTATTTC+AGG | 0.203868 | 3:+12435108 | None:intergenic |
| TGGATCAGTGGAACAAATTA+AGG | 0.229899 | 3:-12435404 | MsG0380012192.01.T01:CDS |
| CAAAAGATCCCAAGATCTTA+TGG | 0.237847 | 3:-12435482 | MsG0380012192.01.T01:CDS |
| GACAAAATTAAAGCAAGATT+TGG | 0.252197 | 3:-12435459 | MsG0380012192.01.T01:CDS |
| GATTCTTGAGGGAGACGATT+TGG | 0.271296 | 3:-12435601 | MsG0380012192.01.T01:CDS |
| CACGACCTCTACCACGAAAA+TGG | 0.272842 | 3:+12434992 | None:intergenic |
| CTCAATTAAGTTGTTGTTCC+AGG | 0.274617 | 3:+12435650 | None:intergenic |
| TGTTGAAGAAGAATTTAATA+TGG | 0.313005 | 3:-12434698 | MsG0380012192.01.T01:CDS |
| ATTTACTGAATACTCTGATT+TGG | 0.325598 | 3:-12435214 | MsG0380012192.01.T01:CDS |
| GAAGAGGTTATATGAATTAT+AGG | 0.339571 | 3:-12434969 | MsG0380012192.01.T01:CDS |
| GGGAGATGTCCCAGAGGAAT+TGG | 0.345733 | 3:-12435580 | MsG0380012192.01.T01:CDS |
| CTTGATGATTCTTGTTTGAT+TGG | 0.348440 | 3:+12434932 | None:intergenic |
| ATTCTTGAGGGAGACGATTT+GGG | 0.354692 | 3:-12435600 | MsG0380012192.01.T01:CDS |
| AAGACAGGTAGTGTCATTCT+TGG | 0.372158 | 3:+12434735 | None:intergenic |
| GATTTCTAGAGGGACCTTCC+TGG | 0.373636 | 3:+12434893 | None:intergenic |
| CATAGCCACCACGTCCTCTT+TGG | 0.374275 | 3:+12435058 | None:intergenic |
| TATAACTGAAGTAGAAAAGT+TGG | 0.390961 | 3:-12435301 | MsG0380012192.01.T01:CDS |
| CGTGGTGGCTATGCTCGTTT+TGG | 0.395091 | 3:-12435048 | MsG0380012192.01.T01:CDS |
| ACAAAATTAAAGCAAGATTT+GGG | 0.407053 | 3:-12435458 | MsG0380012192.01.T01:CDS |
| AGACAGGTAGTGTCATTCTT+GGG | 0.452653 | 3:+12434736 | None:intergenic |
| AAAAGATCCCAAGATCTTAT+GGG | 0.458748 | 3:-12435481 | MsG0380012192.01.T01:CDS |
| AACCATCAGTTGCGTCCTAC+AGG | 0.459311 | 3:-12435144 | MsG0380012192.01.T01:CDS |
| CGTGGTAGAGGTCGTGGAAG+AGG | 0.462783 | 3:-12434985 | MsG0380012192.01.T01:CDS |
| AACAAGAATCATCAAGGTAA+AGG | 0.485600 | 3:-12434925 | MsG0380012192.01.T01:CDS |
| ATCTGTGGATGGAAAGGAAA+GGG | 0.491819 | 3:-12434782 | MsG0380012192.01.T01:CDS |
| ATCAAGCACCACATTGATGA+TGG | 0.492315 | 3:-12435528 | MsG0380012192.01.T01:CDS |
| CTGGCGACAACTACATAACC+TGG | 0.502097 | 3:-12435668 | MsG0380012192.01.T01:CDS |
| GATGCGGAAAGAAAGGTCAT+TGG | 0.503149 | 3:-12434852 | MsG0380012192.01.T01:CDS |
| ATGCGGAAAGAAAGGTCATT+GGG | 0.509313 | 3:-12434851 | MsG0380012192.01.T01:CDS |
| TGTTATAGATGCGGAAAGAA+AGG | 0.510631 | 3:-12434859 | MsG0380012192.01.T01:CDS |
| GGACTAGACAAGATTCTTGA+GGG | 0.521095 | 3:-12435612 | MsG0380012192.01.T01:CDS |
| TGCAACAACAATATAGAATG+AGG | 0.523271 | 3:-12435239 | MsG0380012192.01.T01:CDS |
| TTTGATTGGTCATATTTGAG+AGG | 0.523610 | 3:+12434946 | None:intergenic |
| CAAAGAATCTGTGGATGGAA+AGG | 0.532926 | 3:-12434788 | MsG0380012192.01.T01:CDS |
| CGTGGACGAGGTAGAAATCA+TGG | 0.535808 | 3:-12435021 | MsG0380012192.01.T01:CDS |
| GTCATTGGGCTAAAGCATGC+AGG | 0.540179 | 3:-12434837 | MsG0380012192.01.T01:CDS |
| CCCTCTAGAAATCATGATGA+TGG | 0.541875 | 3:-12434883 | MsG0380012192.01.T01:CDS |
| GTTCCACTGATCCATTAATG+AGG | 0.543612 | 3:+12435413 | None:intergenic |
| AAAATCAGCAGCTTCAAGAC+AGG | 0.547335 | 3:+12434720 | None:intergenic |
| TCTAGAGGGACCTTCCTGGA+TGG | 0.548529 | 3:+12434897 | None:intergenic |
| TTCCACTGATCCATTAATGA+GGG | 0.554709 | 3:+12435414 | None:intergenic |
| TTCCTGTAGGACGCAACTGA+TGG | 0.562606 | 3:+12435142 | None:intergenic |
| AATTGAGTATCTTGCATGTG+AGG | 0.565013 | 3:-12435634 | MsG0380012192.01.T01:CDS |
| AGGTAAAGGTAAAACCATCC+AGG | 0.569963 | 3:-12434911 | MsG0380012192.01.T01:CDS |
| ATTGAGTATCTTGCATGTGA+GGG | 0.575966 | 3:-12435633 | MsG0380012192.01.T01:CDS |
| GGATATGCCATTGTTCCTGT+AGG | 0.578642 | 3:+12435129 | None:intergenic |
| CAATCAAACAAGAATCATCA+AGG | 0.578649 | 3:-12434931 | MsG0380012192.01.T01:CDS |
| TTTGGTTGCAGCTCTTCTAG+TGG | 0.579996 | 3:-12435196 | MsG0380012192.01.T01:CDS |
| TGCCCTCATTAATGGATCAG+TGG | 0.582546 | 3:-12435416 | MsG0380012192.01.T01:CDS |
| AGATACAAAGAATCTGTGGA+TGG | 0.602731 | 3:-12434793 | MsG0380012192.01.T01:CDS |
| GCAACAACAATATAGAATGA+GGG | 0.604762 | 3:-12435238 | MsG0380012192.01.T01:CDS |
| ACGCCCTTGATTAAAAGTTG+TGG | 0.608515 | 3:+12435095 | None:intergenic |
| TATAATCGCCAAAGAGGACG+TGG | 0.608957 | 3:-12435066 | MsG0380012192.01.T01:CDS |
| GGGACTAGACAAGATTCTTG+AGG | 0.613207 | 3:-12435613 | MsG0380012192.01.T01:CDS |
| ACCATCATCATGATTTCTAG+AGG | 0.616492 | 3:+12434882 | None:intergenic |
| TAAAAGATACAAAGAATCTG+TGG | 0.628320 | 3:-12434797 | MsG0380012192.01.T01:CDS |
| GGTGGTTATAATCGCCAAAG+AGG | 0.642086 | 3:-12435072 | MsG0380012192.01.T01:CDS |
| CCATCATCATGATTTCTAGA+GGG | 0.647682 | 3:+12434883 | None:intergenic |
| GTTGCGTCCTACAGGAACAA+TGG | 0.648629 | 3:-12435136 | MsG0380012192.01.T01:CDS |
| AATCTGTGGATGGAAAGGAA+AGG | 0.653361 | 3:-12434783 | MsG0380012192.01.T01:CDS |
| AAAGGTAAAACCATCCAGGA+AGG | 0.653894 | 3:-12434907 | MsG0380012192.01.T01:CDS |
| GATGATGGTTGTTATAGATG+CGG | 0.696569 | 3:-12434868 | MsG0380012192.01.T01:CDS |
| AATCGCCAAAGAGGACGTGG+TGG | 0.698905 | 3:-12435063 | MsG0380012192.01.T01:CDS |
| TTTGTAATCCATCATCAATG+TGG | 0.715751 | 3:+12435520 | None:intergenic |
| CGATTTGGGAGATGTCCCAG+AGG | 0.725435 | 3:-12435586 | MsG0380012192.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAAATTAAAGCAAGATTT+GGG | - | Chr3:12434943-12434962 | MsG0380012192.01.T01:CDS | 20.0% |
| !! | TGTTGAAGAAGAATTTAATA+TGG | - | Chr3:12435703-12435722 | MsG0380012192.01.T01:CDS | 20.0% |
| !!! | TTCAAAATTTTAAGCATAAC+TGG | - | Chr3:12434714-12434733 | MsG0380012192.01.T01:CDS | 20.0% |
| ! | ATTTACTGAATACTCTGATT+TGG | - | Chr3:12435187-12435206 | MsG0380012192.01.T01:CDS | 25.0% |
| ! | GAAGAGGTTATATGAATTAT+AGG | - | Chr3:12435432-12435451 | MsG0380012192.01.T01:CDS | 25.0% |
| ! | GACAAAATTAAAGCAAGATT+TGG | - | Chr3:12434942-12434961 | MsG0380012192.01.T01:CDS | 25.0% |
| ! | TAAAAGATACAAAGAATCTG+TGG | - | Chr3:12435604-12435623 | MsG0380012192.01.T01:CDS | 25.0% |
| ! | TATAACTGAAGTAGAAAAGT+TGG | - | Chr3:12435100-12435119 | MsG0380012192.01.T01:CDS | 25.0% |
| !! | ATTGCACAATTAGAATTTTG+TGG | - | Chr3:12435071-12435090 | MsG0380012192.01.T01:CDS | 25.0% |
| !!! | CAACAACAGTTTTATAATCT+TGG | + | Chr3:12435025-12435044 | None:intergenic | 25.0% |
| AAAAGATCCCAAGATCTTAT+GGG | - | Chr3:12434920-12434939 | MsG0380012192.01.T01:CDS | 30.0% | |
| AACAAGAATCATCAAGGTAA+AGG | - | Chr3:12435476-12435495 | MsG0380012192.01.T01:CDS | 30.0% | |
| CAATCAAACAAGAATCATCA+AGG | - | Chr3:12435470-12435489 | MsG0380012192.01.T01:CDS | 30.0% | |
| GCAACAACAATATAGAATGA+GGG | - | Chr3:12435163-12435182 | MsG0380012192.01.T01:CDS | 30.0% | |
| TGCAACAACAATATAGAATG+AGG | - | Chr3:12435162-12435181 | MsG0380012192.01.T01:CDS | 30.0% | |
| TTTGTAATCCATCATCAATG+TGG | + | Chr3:12434884-12434903 | None:intergenic | 30.0% | |
| ! | AATTTTGTCCCATAAGATCT+TGG | + | Chr3:12434931-12434950 | None:intergenic | 30.0% |
| ! | ATTTTGTCCCATAAGATCTT+GGG | + | Chr3:12434930-12434949 | None:intergenic | 30.0% |
| ! | CTTGATGATTCTTGTTTGAT+TGG | + | Chr3:12435472-12435491 | None:intergenic | 30.0% |
| ! | TATCTTTTACACAGATACTC+TGG | + | Chr3:12435593-12435612 | None:intergenic | 30.0% |
| ! | TTTGATTGGTCATATTTGAG+AGG | + | Chr3:12435458-12435477 | None:intergenic | 30.0% |
| AAAGTTGTGGCGTTTATTTC+AGG | + | Chr3:12435296-12435315 | None:intergenic | 35.0% | |
| AATTGAGTATCTTGCATGTG+AGG | - | Chr3:12434767-12434786 | MsG0380012192.01.T01:CDS | 35.0% | |
| AGATACAAAGAATCTGTGGA+TGG | - | Chr3:12435608-12435627 | MsG0380012192.01.T01:CDS | 35.0% | |
| ATTGAGTATCTTGCATGTGA+GGG | - | Chr3:12434768-12434787 | MsG0380012192.01.T01:CDS | 35.0% | |
| CAAAAGATCCCAAGATCTTA+TGG | - | Chr3:12434919-12434938 | MsG0380012192.01.T01:CDS | 35.0% | |
| TGGATCAGTGGAACAAATTA+AGG | - | Chr3:12434997-12435016 | MsG0380012192.01.T01:CDS | 35.0% | |
| TGTTATAGATGCGGAAAGAA+AGG | - | Chr3:12435542-12435561 | MsG0380012192.01.T01:CDS | 35.0% | |
| TTCCACTGATCCATTAATGA+GGG | + | Chr3:12434990-12435009 | None:intergenic | 35.0% | |
| ! | AACGCCACAACTTTTAATCA+AGG | - | Chr3:12435302-12435321 | MsG0380012192.01.T01:CDS | 35.0% |
| ! | ACCATCATCATGATTTCTAG+AGG | + | Chr3:12435522-12435541 | None:intergenic | 35.0% |
| ! | ACGCCACAACTTTTAATCAA+GGG | - | Chr3:12435303-12435322 | MsG0380012192.01.T01:CDS | 35.0% |
| ! | CCATCATCATGATTTCTAGA+GGG | + | Chr3:12435521-12435540 | None:intergenic | 35.0% |
| ! | CTCAATTAAGTTGTTGTTCC+AGG | + | Chr3:12434754-12434773 | None:intergenic | 35.0% |
| ! | GATGATGGTTGTTATAGATG+CGG | - | Chr3:12435533-12435552 | MsG0380012192.01.T01:CDS | 35.0% |
| ! | TTTTCTTTGCCAATTCCTCT+GGG | + | Chr3:12434833-12434852 | None:intergenic | 35.0% |
| ! | TTTTTCTTTGCCAATTCCTC+TGG | + | Chr3:12434834-12434853 | None:intergenic | 35.0% |
| !! | AGTCTTATTGCCCTCATTAA+TGG | - | Chr3:12434977-12434996 | MsG0380012192.01.T01:CDS | 35.0% |
| AAAATCAGCAGCTTCAAGAC+AGG | + | Chr3:12435684-12435703 | None:intergenic | 40.0% | |
| AAAGGTAAAACCATCCAGGA+AGG | - | Chr3:12435494-12435513 | MsG0380012192.01.T01:CDS | 40.0% | |
| AATCTGTGGATGGAAAGGAA+AGG | - | Chr3:12435618-12435637 | MsG0380012192.01.T01:CDS | 40.0% | |
| ACGCCCTTGATTAAAAGTTG+TGG | + | Chr3:12435309-12435328 | None:intergenic | 40.0% | |
| AGGTAAAGGTAAAACCATCC+AGG | - | Chr3:12435490-12435509 | MsG0380012192.01.T01:CDS | 40.0% | |
| ATCAAGCACCACATTGATGA+TGG | - | Chr3:12434873-12434892 | MsG0380012192.01.T01:CDS | 40.0% | |
| ATCTGTGGATGGAAAGGAAA+GGG | - | Chr3:12435619-12435638 | MsG0380012192.01.T01:CDS | 40.0% | |
| ATGCGGAAAGAAAGGTCATT+GGG | - | Chr3:12435550-12435569 | MsG0380012192.01.T01:CDS | 40.0% | |
| ATTCTTGAGGGAGACGATTT+GGG | - | Chr3:12434801-12434820 | MsG0380012192.01.T01:CDS | 40.0% | |
| CAAAGAATCTGTGGATGGAA+AGG | - | Chr3:12435613-12435632 | MsG0380012192.01.T01:CDS | 40.0% | |
| GGACTAGACAAGATTCTTGA+GGG | - | Chr3:12434789-12434808 | MsG0380012192.01.T01:CDS | 40.0% | |
| GTTCCACTGATCCATTAATG+AGG | + | Chr3:12434991-12435010 | None:intergenic | 40.0% | |
| ! | AACTTTTCATGCATCTCAGG+TGG | - | Chr3:12435136-12435155 | MsG0380012192.01.T01:CDS | 40.0% |
| ! | AAGACAGGTAGTGTCATTCT+TGG | + | Chr3:12435669-12435688 | None:intergenic | 40.0% |
| ! | ACAACTTTTAATCAAGGGCG+TGG | - | Chr3:12435308-12435327 | MsG0380012192.01.T01:CDS | 40.0% |
| ! | AGACAGGTAGTGTCATTCTT+GGG | + | Chr3:12435668-12435687 | None:intergenic | 40.0% |
| ! | CCCTCTAGAAATCATGATGA+TGG | - | Chr3:12435518-12435537 | MsG0380012192.01.T01:CDS | 40.0% |
| ! | CTCAACTTTTCATGCATCTC+AGG | - | Chr3:12435133-12435152 | MsG0380012192.01.T01:CDS | 40.0% |
| GATGCGGAAAGAAAGGTCAT+TGG | - | Chr3:12435549-12435568 | MsG0380012192.01.T01:CDS | 45.0% | |
| GATTCTTGAGGGAGACGATT+TGG | - | Chr3:12434800-12434819 | MsG0380012192.01.T01:CDS | 45.0% | |
| GGATATGCCATTGTTCCTGT+AGG | + | Chr3:12435275-12435294 | None:intergenic | 45.0% | |
| GGGACTAGACAAGATTCTTG+AGG | - | Chr3:12434788-12434807 | MsG0380012192.01.T01:CDS | 45.0% | |
| GGTGGTTATAATCGCCAAAG+AGG | - | Chr3:12435329-12435348 | MsG0380012192.01.T01:CDS | 45.0% | |
| TATAATCGCCAAAGAGGACG+TGG | - | Chr3:12435335-12435354 | MsG0380012192.01.T01:CDS | 45.0% | |
| TTTGGTTGCAGCTCTTCTAG+TGG | - | Chr3:12435205-12435224 | MsG0380012192.01.T01:CDS | 45.0% | |
| ! | CATGGTCGAAACCATTTTCG+TGG | - | Chr3:12435398-12435417 | MsG0380012192.01.T01:CDS | 45.0% |
| ! | CGAAACCATTTTCGTGGTAG+AGG | - | Chr3:12435404-12435423 | MsG0380012192.01.T01:CDS | 45.0% |
| ! | TGCCCTCATTAATGGATCAG+TGG | - | Chr3:12434985-12435004 | MsG0380012192.01.T01:CDS | 45.0% |
| !! | ACTTTTAATCAAGGGCGTGG+TGG | - | Chr3:12435311-12435330 | MsG0380012192.01.T01:CDS | 45.0% |
| AACCATCAGTTGCGTCCTAC+AGG | - | Chr3:12435257-12435276 | MsG0380012192.01.T01:CDS | 50.0% | |
| CACGACCTCTACCACGAAAA+TGG | + | Chr3:12435412-12435431 | None:intergenic | 50.0% | |
| CGTGGACGAGGTAGAAATCA+TGG | - | Chr3:12435380-12435399 | MsG0380012192.01.T01:CDS | 50.0% | |
| CTGGCGACAACTACATAACC+TGG | - | Chr3:12434733-12434752 | MsG0380012192.01.T01:CDS | 50.0% | |
| GTCATTGGGCTAAAGCATGC+AGG | - | Chr3:12435564-12435583 | MsG0380012192.01.T01:CDS | 50.0% | |
| GTTGCGTCCTACAGGAACAA+TGG | - | Chr3:12435265-12435284 | MsG0380012192.01.T01:CDS | 50.0% | |
| TTCCTGTAGGACGCAACTGA+TGG | + | Chr3:12435262-12435281 | None:intergenic | 50.0% | |
| ! | CATTTTCGTGGTAGAGGTCG+TGG | - | Chr3:12435410-12435429 | MsG0380012192.01.T01:CDS | 50.0% |
| ! | GATTTCTAGAGGGACCTTCC+TGG | + | Chr3:12435511-12435530 | None:intergenic | 50.0% |
| !! | TATGCTCGTTTTGGTGGTCG+TGG | - | Chr3:12435362-12435381 | MsG0380012192.01.T01:CDS | 50.0% |
| AATCGCCAAAGAGGACGTGG+TGG | - | Chr3:12435338-12435357 | MsG0380012192.01.T01:CDS | 55.0% | |
| CATAGCCACCACGTCCTCTT+TGG | + | Chr3:12435346-12435365 | None:intergenic | 55.0% | |
| GGGAGATGTCCCAGAGGAAT+TGG | - | Chr3:12434821-12434840 | MsG0380012192.01.T01:CDS | 55.0% | |
| TCTAGAGGGACCTTCCTGGA+TGG | + | Chr3:12435507-12435526 | None:intergenic | 55.0% | |
| ! | CGATTTGGGAGATGTCCCAG+AGG | - | Chr3:12434815-12434834 | MsG0380012192.01.T01:CDS | 55.0% |
| ! | CGTGGTGGCTATGCTCGTTT+TGG | - | Chr3:12435353-12435372 | MsG0380012192.01.T01:CDS | 55.0% |
| ! | GGTGGCTATGCTCGTTTTGG+TGG | - | Chr3:12435356-12435375 | MsG0380012192.01.T01:CDS | 55.0% |
| CGTGGTAGAGGTCGTGGAAG+AGG | - | Chr3:12435416-12435435 | MsG0380012192.01.T01:CDS | 60.0% | |
| !! | CGTTTTGGTGGTCGTGGACG+AGG | - | Chr3:12435368-12435387 | MsG0380012192.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 12434693 | 12435730 | 12434693 | ID=MsG0380012192.01;Name=MsG0380012192.01 |
| Chr3 | mRNA | 12434693 | 12435730 | 12434693 | ID=MsG0380012192.01.T01;Parent=MsG0380012192.01;Name=MsG0380012192.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|345 |
| Chr3 | exon | 12434693 | 12435730 | 12434693 | ID=MsG0380012192.01.T01:exon:2394;Parent=MsG0380012192.01.T01 |
| Chr3 | CDS | 12434693 | 12435730 | 12434693 | ID=MsG0380012192.01.T01:cds;Parent=MsG0380012192.01.T01 |
| Gene Sequence |
| Protein sequence |
