Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031096.01.T01 | XP_039688731.1 | 88.796 | 357 | 30 | 1 | 1 | 357 | 1 | 347 | 0 | 629 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031096.01.T01 | A0A2G9HA29 | 56.267 | 359 | 128 | 6 | 1 | 340 | 1 | 349 | 9.19e-138 | 405 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180002273.01 | MsG0680031096.01 | 0.810407 | 1.170677e-50 | 7.050609e-48 |
| MsG0180006023.01 | MsG0680031096.01 | 0.801667 | 8.081798e-49 | 3.881861e-46 |
| MsG0280010551.01 | MsG0680031096.01 | 0.817670 | 2.924282e-52 | 2.143219e-49 |
| MsG0380012192.01 | MsG0680031096.01 | 0.804263 | 2.349125e-49 | 1.205750e-46 |
| MsG0680031096.01 | MsG0680031549.01 | 0.824369 | 8.379848e-54 | 7.407570e-51 |
| MsG0680031096.01 | MsG0780038937.01 | 0.819039 | 1.431781e-52 | 1.089747e-49 |
| MsG0680031096.01 | MsG0880043252.01 | 0.833321 | 5.703894e-56 | 6.546116e-53 |
| MsG0680031096.01 | MsG0880044510.01 | 0.800485 | 1.409955e-48 | 6.572932e-46 |
| MsG0680031096.01 | MsG0880044542.01 | 0.814969 | 1.175157e-51 | 7.998807e-49 |
| MsG0680031096.01 | MsG0880045583.01 | 0.821951 | 3.072404e-53 | 2.536055e-50 |
| MsG0680031096.01 | MsG0880045897.01 | -0.817954 | 2.522105e-52 | 1.862861e-49 |
| MsG0680031096.01 | MsG0880046762.01 | 0.819429 | 1.167163e-52 | 8.979322e-50 |
| MsG0580025072.01 | MsG0680031096.01 | 0.804733 | 1.875197e-49 | 9.743083e-47 |
| MsG0380016765.01 | MsG0680031096.01 | 0.806489 | 8.026207e-50 | 4.362043e-47 |
| MsG0280006456.01 | MsG0680031096.01 | 0.805552 | 1.263507e-49 | 6.703972e-47 |
| MsG0280007609.01 | MsG0680031096.01 | 0.821163 | 4.673071e-53 | 3.772885e-50 |
| MsG0280009514.01 | MsG0680031096.01 | 0.814145 | 1.787900e-51 | 1.190175e-48 |
| MsG0280010389.01 | MsG0680031096.01 | 0.811584 | 6.508714e-51 | 4.044376e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031096.01.T01 | MTR_7g062720 | 93.939 | 132 | 8 | 0 | 1 | 132 | 1 | 132 | 1.69e-86 | 258 |
| MsG0680031096.01.T01 | MTR_4g037355 | 70.769 | 130 | 24 | 3 | 151 | 280 | 1 | 116 | 3.55e-54 | 175 |
| MsG0680031096.01.T01 | MTR_5g061150 | 63.333 | 120 | 44 | 0 | 27 | 146 | 17 | 136 | 2.56e-47 | 157 |
| MsG0680031096.01.T01 | MTR_4g112730 | 75.000 | 64 | 16 | 0 | 138 | 201 | 1 | 64 | 2.72e-26 | 100 |
| MsG0680031096.01.T01 | MTR_1g036690 | 61.628 | 86 | 22 | 3 | 273 | 357 | 5 | 80 | 1.25e-23 | 93.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 66 sgRNAs with CRISPR-Local
Find 87 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAGGCCCTTAACATTTC+TGG | 0.105015 | 6:-14250445 | MsG0680031096.01.T01:CDS |
| GCATCTCAACACAATCATTT+TGG | 0.131367 | 6:-14249869 | MsG0680031096.01.T01:CDS |
| TTCCACTTCTGGTGGGAAAA+TGG | 0.172180 | 6:+14249734 | None:intergenic |
| TCTTAAGTGCTTCATTTATA+TGG | 0.214395 | 6:+14250293 | None:intergenic |
| ATCCAATCATATCTTGCTTT+TGG | 0.220117 | 6:+14250187 | None:intergenic |
| GATGCTGATTATGATATTTA+TGG | 0.234910 | 6:-14249515 | MsG0680031096.01.T01:CDS |
| AATACTACTCCTTTGGATAT+TGG | 0.253196 | 6:-14249485 | MsG0680031096.01.T01:CDS |
| TCCACTTCTGGTGGGAAAAT+GGG | 0.275118 | 6:+14249735 | None:intergenic |
| TTTGTATACTTCAGAATTAT+AGG | 0.281074 | 6:+14250129 | None:intergenic |
| TGTTGAGATGCATTCACTTC+AGG | 0.293409 | 6:+14249881 | None:intergenic |
| TGCCATAAAAGAAGGAAATA+AGG | 0.335057 | 6:-14250359 | MsG0680031096.01.T01:CDS |
| AGTTGTTTCCAGAAATGTTA+AGG | 0.345031 | 6:+14250437 | None:intergenic |
| CACCAGCAGGGCGAGCTTCA+TGG | 0.368055 | 6:+14249915 | None:intergenic |
| CGCGGTCGTGGTCGTGGTCG+TGG | 0.386944 | 6:-14249815 | MsG0680031096.01.T01:CDS |
| ATTGATCACCTTGTTGAAGA+TGG | 0.391237 | 6:-14249434 | MsG0680031096.01.T01:CDS |
| GTTGTTTCCAGAAATGTTAA+GGG | 0.399743 | 6:+14250438 | None:intergenic |
| TAATTTAATTTCTTGTCTCC+TGG | 0.400386 | 6:-14249972 | MsG0680031096.01.T01:CDS |
| CTGGAAACAACTATTTGACT+TGG | 0.414379 | 6:-14250426 | MsG0680031096.01.T01:CDS |
| TACTTAGCTGCTGAAGGAAA+TGG | 0.418999 | 6:-14250385 | MsG0680031096.01.T01:CDS |
| GTTGAGATGCATTCACTTCA+GGG | 0.423894 | 6:+14249882 | None:intergenic |
| CGCGGTCGCGGTCGTGGTCG+TGG | 0.429172 | 6:-14249821 | MsG0680031096.01.T01:CDS |
| TAAAGGTCAACCAAATGCTT+TGG | 0.429910 | 6:+14249602 | None:intergenic |
| GGTCATGCCCACAATCCTAA+TGG | 0.437132 | 6:-14249770 | MsG0680031096.01.T01:CDS |
| CAACTATTTGACTTGGGCCG+TGG | 0.437626 | 6:-14250419 | MsG0680031096.01.T01:CDS |
| AACCATGAAGCTCGCCCTGC+TGG | 0.438159 | 6:-14249917 | MsG0680031096.01.T01:CDS |
| TGACATGAATACTACTCCTT+TGG | 0.440582 | 6:-14249492 | MsG0680031096.01.T01:CDS |
| GGGAATGGAGCTACACCAGC+AGG | 0.445287 | 6:+14249902 | None:intergenic |
| CGTGGTCGCGGTCGCGGTCG+TGG | 0.450743 | 6:-14249827 | MsG0680031096.01.T01:CDS |
| CGTGGTCGTGGTCGCGGTCG+CGG | 0.452026 | 6:-14249833 | MsG0680031096.01.T01:CDS |
| CCACTTCTGGTGGGAAAATG+GGG | 0.456004 | 6:+14249736 | None:intergenic |
| TCTCTCAAAACTTCACTTTG+AGG | 0.457299 | 6:-14250461 | MsG0680031096.01.T01:CDS |
| ATGTCGTACTCCAAAGCATT+TGG | 0.465557 | 6:-14249612 | MsG0680031096.01.T01:CDS |
| TTTGGGAGCGCTCGTGGTCG+TGG | 0.467855 | 6:-14249851 | MsG0680031096.01.T01:CDS |
| TCCCAAAAGCAAGATATGAT+TGG | 0.468237 | 6:-14250189 | MsG0680031096.01.T01:CDS |
| TGAAAGATCCACTTGTGCTC+TGG | 0.468533 | 6:-14250255 | MsG0680031096.01.T01:CDS |
| AGCGCTCGTGGTCGTGGTCG+TGG | 0.471808 | 6:-14249845 | MsG0680031096.01.T01:CDS |
| ACTCATTATGCTTATAAAGA+TGG | 0.483040 | 6:-14249542 | MsG0680031096.01.T01:CDS |
| TTGTTGTTGCAAGAGCATAT+TGG | 0.488960 | 6:+14250024 | None:intergenic |
| CGTGGTCGTGGTCGTGGTCG+CGG | 0.491270 | 6:-14249839 | MsG0680031096.01.T01:CDS |
| TGCAACAACAATACCGTGAA+AGG | 0.491455 | 6:-14250012 | MsG0680031096.01.T01:CDS |
| CATTGTTCTGTTCAGCAACC+AGG | 0.503364 | 6:+14249954 | None:intergenic |
| AAAGTATCTGTTATCGATGT+GGG | 0.505636 | 6:-14249658 | MsG0680031096.01.T01:CDS |
| GCAACAACAATACCGTGAAA+GGG | 0.512293 | 6:-14250011 | MsG0680031096.01.T01:CDS |
| AGTTTATTCCAGAGCACAAG+TGG | 0.512360 | 6:+14250247 | None:intergenic |
| GATGCATTCACTTCAGGGAA+TGG | 0.514758 | 6:+14249887 | None:intergenic |
| GAAAAGAATGAAAATGAGAA+GGG | 0.529787 | 6:-14249704 | MsG0680031096.01.T01:CDS |
| TGGAAACAACTATTTGACTT+GGG | 0.534823 | 6:-14250425 | MsG0680031096.01.T01:CDS |
| TGAAAAGAATGAAAATGAGA+AGG | 0.541748 | 6:-14249705 | MsG0680031096.01.T01:CDS |
| AATATGCATGGTCGTGGTCG+TGG | 0.544688 | 6:-14249791 | MsG0680031096.01.T01:CDS |
| AATGGAGATGCCATAAAAGA+AGG | 0.547076 | 6:-14250367 | MsG0680031096.01.T01:CDS |
| GAGCATATTGGATGCATGAA+AGG | 0.547906 | 6:+14250036 | None:intergenic |
| AAGAATGAAAATGAGAAGGG+TGG | 0.573649 | 6:-14249701 | MsG0680031096.01.T01:CDS |
| GAAAGTATCTGTTATCGATG+TGG | 0.574435 | 6:-14249659 | MsG0680031096.01.T01:CDS |
| GAAATGTACTTAGCTGCTGA+AGG | 0.580070 | 6:-14250391 | MsG0680031096.01.T01:CDS |
| ACTTCTCAATTAGAATTGTG+TGG | 0.587587 | 6:-14250103 | MsG0680031096.01.T01:CDS |
| CAACAACAATACCGTGAAAG+GGG | 0.610582 | 6:-14250010 | MsG0680031096.01.T01:CDS |
| TAAGTACATTTCAGTATCCA+CGG | 0.611101 | 6:+14250402 | None:intergenic |
| CTTCATTTATATGGCGACGA+AGG | 0.612750 | 6:+14250302 | None:intergenic |
| AAGAAATCACCAATATCCAA+AGG | 0.617484 | 6:+14249476 | None:intergenic |
| AGTATCTGTTATCGATGTGG+GGG | 0.620042 | 6:-14249656 | MsG0680031096.01.T01:CDS |
| CGTGGAAATATGCATGGTCG+TGG | 0.624916 | 6:-14249797 | MsG0680031096.01.T01:CDS |
| AAGTATCTGTTATCGATGTG+GGG | 0.635242 | 6:-14249657 | MsG0680031096.01.T01:CDS |
| TCACGATTCCATCTTCAACA+AGG | 0.635824 | 6:+14249426 | None:intergenic |
| CGTGGTCGTGGAAATATGCA+TGG | 0.646225 | 6:-14249803 | MsG0680031096.01.T01:CDS |
| GGAATGGAGCTACACCAGCA+GGG | 0.651331 | 6:+14249903 | None:intergenic |
| CAAGTGGATCTTTCACAGTG+AGG | 0.718603 | 6:+14250263 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTAAAAAACAAAGGAAAAA+TGG | - | Chr6:14250317-14250336 | MsG0680031096.01.T01:CDS | 20.0% |
| !! | TTTGTATACTTCAGAATTAT+AGG | + | Chr6:14249761-14249780 | None:intergenic | 20.0% |
| ! | ACTCATTATGCTTATAAAGA+TGG | - | Chr6:14250345-14250364 | MsG0680031096.01.T01:CDS | 25.0% |
| ! | GAAAAGAATGAAAATGAGAA+GGG | - | Chr6:14250183-14250202 | MsG0680031096.01.T01:CDS | 25.0% |
| ! | TCTTAAGTGCTTCATTTATA+TGG | + | Chr6:14249597-14249616 | None:intergenic | 25.0% |
| ! | TGAAAAGAATGAAAATGAGA+AGG | - | Chr6:14250182-14250201 | MsG0680031096.01.T01:CDS | 25.0% |
| !! | GATGCTGATTATGATATTTA+TGG | - | Chr6:14250372-14250391 | MsG0680031096.01.T01:CDS | 25.0% |
| !! | TAATTTAATTTCTTGTCTCC+TGG | - | Chr6:14249915-14249934 | MsG0680031096.01.T01:CDS | 25.0% |
| !!! | TTTCATTATTTTTCCACTTC+TGG | + | Chr6:14250167-14250186 | None:intergenic | 25.0% |
| !!! | TTTTTAGTGATTGCTGATAA+AGG | + | Chr6:14250305-14250324 | None:intergenic | 25.0% |
| AAGAAATCACCAATATCCAA+AGG | + | Chr6:14250414-14250433 | None:intergenic | 30.0% | |
| AATACTACTCCTTTGGATAT+TGG | - | Chr6:14250402-14250421 | MsG0680031096.01.T01:CDS | 30.0% | |
| ACTTCTCAATTAGAATTGTG+TGG | - | Chr6:14249784-14249803 | MsG0680031096.01.T01:CDS | 30.0% | |
| CAGCAATCACTAAAAAACAA+AGG | - | Chr6:14250309-14250328 | MsG0680031096.01.T01:CDS | 30.0% | |
| TAAGTACATTTCAGTATCCA+CGG | + | Chr6:14249488-14249507 | None:intergenic | 30.0% | |
| TGCCATAAAAGAAGGAAATA+AGG | - | Chr6:14249528-14249547 | MsG0680031096.01.T01:CDS | 30.0% | |
| TGGTGAAAAAATAACAGATG+CGG | - | Chr6:14249804-14249823 | MsG0680031096.01.T01:CDS | 30.0% | |
| ! | AAAGTATCTGTTATCGATGT+GGG | - | Chr6:14250229-14250248 | MsG0680031096.01.T01:CDS | 30.0% |
| ! | AGTTGTTTCCAGAAATGTTA+AGG | + | Chr6:14249453-14249472 | None:intergenic | 30.0% |
| ! | ATCCAATCATATCTTGCTTT+TGG | + | Chr6:14249703-14249722 | None:intergenic | 30.0% |
| ! | CATCTCAACACAATCATTTT+GGG | - | Chr6:14250019-14250038 | MsG0680031096.01.T01:CDS | 30.0% |
| ! | GAATTTTCCATTAGGATTGT+GGG | + | Chr6:14250127-14250146 | None:intergenic | 30.0% |
| ! | GTTGTTTCCAGAAATGTTAA+GGG | + | Chr6:14249452-14249471 | None:intergenic | 30.0% |
| ! | TGAATTTTCCATTAGGATTG+TGG | + | Chr6:14250128-14250147 | None:intergenic | 30.0% |
| ! | TGGAAACAACTATTTGACTT+GGG | - | Chr6:14249462-14249481 | MsG0680031096.01.T01:CDS | 30.0% |
| !! | ATTATTTTTCCACTTCTGGT+GGG | + | Chr6:14250163-14250182 | None:intergenic | 30.0% |
| !! | TCCAATCATATCTTGCTTTT+GGG | + | Chr6:14249702-14249721 | None:intergenic | 30.0% |
| !!! | ATTTTTGAAATCCCCTTTCA+CGG | + | Chr6:14249891-14249910 | None:intergenic | 30.0% |
| !!! | TGCCTTATTTCCTTCTTTTA+TGG | + | Chr6:14249533-14249552 | None:intergenic | 30.0% |
| AAGAATGAAAATGAGAAGGG+TGG | - | Chr6:14250186-14250205 | MsG0680031096.01.T01:CDS | 35.0% | |
| AAGTATCTGTTATCGATGTG+GGG | - | Chr6:14250230-14250249 | MsG0680031096.01.T01:CDS | 35.0% | |
| AATGGAGATGCCATAAAAGA+AGG | - | Chr6:14249520-14249539 | MsG0680031096.01.T01:CDS | 35.0% | |
| ATTGATCACCTTGTTGAAGA+TGG | - | Chr6:14250453-14250472 | MsG0680031096.01.T01:CDS | 35.0% | |
| CTGGAAACAACTATTTGACT+TGG | - | Chr6:14249461-14249480 | MsG0680031096.01.T01:CDS | 35.0% | |
| TAAAGGTCAACCAAATGCTT+TGG | + | Chr6:14250288-14250307 | None:intergenic | 35.0% | |
| TCCCAAAAGCAAGATATGAT+TGG | - | Chr6:14249698-14249717 | MsG0680031096.01.T01:CDS | 35.0% | |
| TCTCTCAAAACTTCACTTTG+AGG | - | Chr6:14249426-14249445 | MsG0680031096.01.T01:CDS | 35.0% | |
| TGACATGAATACTACTCCTT+TGG | - | Chr6:14250395-14250414 | MsG0680031096.01.T01:CDS | 35.0% | |
| ! | GCATCTCAACACAATCATTT+TGG | - | Chr6:14250018-14250037 | MsG0680031096.01.T01:CDS | 35.0% |
| ! | TTGTTGTTGCAAGAGCATAT+TGG | + | Chr6:14249866-14249885 | None:intergenic | 35.0% |
| !! | AATCATATCTTGCTTTTGGG+AGG | + | Chr6:14249699-14249718 | None:intergenic | 35.0% |
| !! | CATTATTTTTCCACTTCTGG+TGG | + | Chr6:14250164-14250183 | None:intergenic | 35.0% |
| !! | GAAAGTATCTGTTATCGATG+TGG | - | Chr6:14250228-14250247 | MsG0680031096.01.T01:CDS | 35.0% |
| !!! | TGCTTTTGCTTTTTGTTGCT+CGG | + | Chr6:14249557-14249576 | None:intergenic | 35.0% |
| AGTATCTGTTATCGATGTGG+GGG | - | Chr6:14250231-14250250 | MsG0680031096.01.T01:CDS | 40.0% | |
| AGTTTATTCCAGAGCACAAG+TGG | + | Chr6:14249643-14249662 | None:intergenic | 40.0% | |
| CAACAACAATACCGTGAAAG+GGG | - | Chr6:14249877-14249896 | MsG0680031096.01.T01:CDS | 40.0% | |
| CTTCATTTATATGGCGACGA+AGG | + | Chr6:14249588-14249607 | None:intergenic | 40.0% | |
| GAAATGTACTTAGCTGCTGA+AGG | - | Chr6:14249496-14249515 | MsG0680031096.01.T01:CDS | 40.0% | |
| GAGCATATTGGATGCATGAA+AGG | + | Chr6:14249854-14249873 | None:intergenic | 40.0% | |
| GCAACAACAATACCGTGAAA+GGG | - | Chr6:14249876-14249895 | MsG0680031096.01.T01:CDS | 40.0% | |
| GTTGAGATGCATTCACTTCA+GGG | + | Chr6:14250008-14250027 | None:intergenic | 40.0% | |
| TACTTAGCTGCTGAAGGAAA+TGG | - | Chr6:14249502-14249521 | MsG0680031096.01.T01:CDS | 40.0% | |
| TCACGATTCCATCTTCAACA+AGG | + | Chr6:14250464-14250483 | None:intergenic | 40.0% | |
| TGCAACAACAATACCGTGAA+AGG | - | Chr6:14249875-14249894 | MsG0680031096.01.T01:CDS | 40.0% | |
| TGTTGAGATGCATTCACTTC+AGG | + | Chr6:14250009-14250028 | None:intergenic | 40.0% | |
| ! | ATGTCGTACTCCAAAGCATT+TGG | - | Chr6:14250275-14250294 | MsG0680031096.01.T01:CDS | 40.0% |
| ! | TTTGAGGCCCTTAACATTTC+TGG | - | Chr6:14249442-14249461 | MsG0680031096.01.T01:CDS | 40.0% |
| !! | TCTTGCTTTTGGGAGGATAA+TGG | + | Chr6:14249692-14249711 | None:intergenic | 40.0% |
| !!! | GGGGTTCTGAATTTTCCATT+AGG | + | Chr6:14250135-14250154 | None:intergenic | 40.0% |
| CAAGTGGATCTTTCACAGTG+AGG | + | Chr6:14249627-14249646 | None:intergenic | 45.0% | |
| CATTGTTCTGTTCAGCAACC+AGG | + | Chr6:14249936-14249955 | None:intergenic | 45.0% | |
| GATGCATTCACTTCAGGGAA+TGG | + | Chr6:14250003-14250022 | None:intergenic | 45.0% | |
| TCCACTTCTGGTGGGAAAAT+GGG | + | Chr6:14250155-14250174 | None:intergenic | 45.0% | |
| TGAAAGATCCACTTGTGCTC+TGG | - | Chr6:14249632-14249651 | MsG0680031096.01.T01:CDS | 45.0% | |
| TGTTATCGATGTGGGGGAAA+AGG | - | Chr6:14250237-14250256 | MsG0680031096.01.T01:CDS | 45.0% | |
| TTCCACTTCTGGTGGGAAAA+TGG | + | Chr6:14250156-14250175 | None:intergenic | 45.0% | |
| AATATGCATGGTCGTGGTCG+TGG | - | Chr6:14250096-14250115 | MsG0680031096.01.T01:CDS | 50.0% | |
| CCACTTCTGGTGGGAAAATG+GGG | + | Chr6:14250154-14250173 | None:intergenic | 50.0% | |
| CGTGGAAATATGCATGGTCG+TGG | - | Chr6:14250090-14250109 | MsG0680031096.01.T01:CDS | 50.0% | |
| CGTGGTCGTGGAAATATGCA+TGG | - | Chr6:14250084-14250103 | MsG0680031096.01.T01:CDS | 50.0% | |
| GATGTGGGGGAAAAGGTCAT+TGG | - | Chr6:14250244-14250263 | MsG0680031096.01.T01:CDS | 50.0% | |
| GGTCATGCCCACAATCCTAA+TGG | - | Chr6:14250117-14250136 | MsG0680031096.01.T01:CDS | 50.0% | |
| !! | CAACTATTTGACTTGGGCCG+TGG | - | Chr6:14249468-14249487 | MsG0680031096.01.T01:CDS | 50.0% |
| !!! | AATCATTTTGGGAGCGCTCG+TGG | - | Chr6:14250030-14250049 | MsG0680031096.01.T01:CDS | 50.0% |
| GGAATGGAGCTACACCAGCA+GGG | + | Chr6:14249987-14250006 | None:intergenic | 55.0% | |
| ! | CCCCATTTTCCCACCAGAAG+TGG | - | Chr6:14250151-14250170 | MsG0680031096.01.T01:CDS | 55.0% |
| AACCATGAAGCTCGCCCTGC+TGG | - | Chr6:14249970-14249989 | MsG0680031096.01.T01:CDS | 60.0% | |
| GGGAATGGAGCTACACCAGC+AGG | + | Chr6:14249988-14250007 | None:intergenic | 60.0% | |
| CACCAGCAGGGCGAGCTTCA+TGG | + | Chr6:14249975-14249994 | None:intergenic | 65.0% | |
| !! | TTTGGGAGCGCTCGTGGTCG+TGG | - | Chr6:14250036-14250055 | MsG0680031096.01.T01:CDS | 65.0% |
| AGCGCTCGTGGTCGTGGTCG+TGG | - | Chr6:14250042-14250061 | MsG0680031096.01.T01:CDS | 70.0% | |
| CGTGGTCGTGGTCGTGGTCG+CGG | - | Chr6:14250048-14250067 | MsG0680031096.01.T01:CDS | 70.0% | |
| CGCGGTCGTGGTCGTGGTCG+TGG | - | Chr6:14250072-14250091 | MsG0680031096.01.T01:CDS | 75.0% | |
| CGTGGTCGTGGTCGCGGTCG+CGG | - | Chr6:14250054-14250073 | MsG0680031096.01.T01:CDS | 75.0% | |
| ! | CGCGGTCGCGGTCGTGGTCG+TGG | - | Chr6:14250066-14250085 | MsG0680031096.01.T01:CDS | 80.0% |
| ! | CGTGGTCGCGGTCGCGGTCG+TGG | - | Chr6:14250060-14250079 | MsG0680031096.01.T01:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 14249418 | 14250491 | 14249418 | ID=MsG0680031096.01;Name=MsG0680031096.01 |
| Chr6 | mRNA | 14249418 | 14250491 | 14249418 | ID=MsG0680031096.01.T01;Parent=MsG0680031096.01;Name=MsG0680031096.01.T01;_AED=0.43;_eAED=0.43;_QI=0|-1|0|1|-1|1|1|0|357 |
| Chr6 | exon | 14249418 | 14250491 | 14249418 | ID=MsG0680031096.01.T01:exon:9795;Parent=MsG0680031096.01.T01 |
| Chr6 | CDS | 14249418 | 14250491 | 14249418 | ID=MsG0680031096.01.T01:cds;Parent=MsG0680031096.01.T01 |
| Gene Sequence |
| Protein sequence |
