Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012455.01.T01 | XP_013459054.1 | 94.726 | 493 | 16 | 1 | 1 | 493 | 1 | 483 | 0 | 974 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012455.01.T01 | Q8VYG3 | 67.49 | 486 | 145 | 3 | 9 | 491 | 10 | 485 | 0 | 672 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012455.01.T01 | A0A072UTZ1 | 94.726 | 493 | 16 | 1 | 1 | 493 | 1 | 483 | 0.0 | 974 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0180004835.01 | MsG0380012455.01 | PPI |
| MsG0380012455.01 | MsG0380015944.01 | PPI |
| MsG0380012455.01 | MsG0380017841.01 | PPI |
| MsG0380012455.01 | MsG0080048140.01 | PPI |
| MsG0380012455.01 | MsG0580024373.01 | PPI |
| MsG0380012455.01 | MsG0580029407.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012455.01.T01 | MTR_3g023740 | 94.726 | 493 | 16 | 1 | 1 | 493 | 1 | 483 | 0.0 | 974 |
| MsG0380012455.01.T01 | MTR_3g105230 | 86.221 | 479 | 56 | 1 | 1 | 479 | 1 | 469 | 0.0 | 882 |
| MsG0380012455.01.T01 | MTR_5g009970 | 47.629 | 464 | 230 | 4 | 29 | 489 | 40 | 493 | 5.02e-152 | 443 |
| MsG0380012455.01.T01 | MTR_5g010000 | 46.767 | 464 | 234 | 4 | 29 | 489 | 39 | 492 | 2.66e-146 | 429 |
| MsG0380012455.01.T01 | MTR_5g085730 | 43.811 | 509 | 259 | 7 | 1 | 492 | 1 | 499 | 9.88e-146 | 427 |
| MsG0380012455.01.T01 | MTR_8g099410 | 45.929 | 479 | 233 | 6 | 27 | 490 | 25 | 492 | 1.77e-143 | 422 |
| MsG0380012455.01.T01 | MTR_3g080190 | 45.082 | 488 | 242 | 6 | 22 | 493 | 32 | 509 | 7.72e-143 | 421 |
| MsG0380012455.01.T01 | MTR_8g099410 | 45.929 | 479 | 233 | 6 | 27 | 490 | 25 | 492 | 4.50e-142 | 422 |
| MsG0380012455.01.T01 | MTR_5g093590 | 45.738 | 481 | 234 | 6 | 29 | 492 | 33 | 503 | 5.79e-142 | 417 |
| MsG0380012455.01.T01 | MTR_3g117500 | 44.586 | 471 | 236 | 7 | 30 | 487 | 24 | 482 | 4.23e-135 | 399 |
| MsG0380012455.01.T01 | MTR_8g104820 | 43.856 | 472 | 238 | 9 | 30 | 487 | 30 | 488 | 1.12e-134 | 399 |
| MsG0380012455.01.T01 | MTR_3g080810 | 44.586 | 471 | 234 | 9 | 30 | 487 | 35 | 491 | 1.16e-134 | 399 |
| MsG0380012455.01.T01 | MTR_5g009970 | 46.226 | 424 | 215 | 4 | 69 | 489 | 6 | 419 | 5.03e-130 | 384 |
| MsG0380012455.01.T01 | MTR_4g074960 | 43.424 | 479 | 244 | 7 | 29 | 491 | 27 | 494 | 5.44e-129 | 388 |
| MsG0380012455.01.T01 | MTR_3g010330 | 44.093 | 474 | 245 | 6 | 25 | 490 | 20 | 481 | 2.72e-128 | 382 |
| MsG0380012455.01.T01 | MTR_4g035955 | 43.162 | 468 | 241 | 5 | 29 | 487 | 13 | 464 | 1.31e-126 | 377 |
| MsG0380012455.01.T01 | MTR_4g035930 | 41.202 | 466 | 253 | 6 | 29 | 487 | 14 | 465 | 1.87e-122 | 366 |
| MsG0380012455.01.T01 | MTR_1g037340 | 44.468 | 470 | 240 | 8 | 30 | 490 | 25 | 482 | 4.15e-122 | 366 |
| MsG0380012455.01.T01 | MTR_4g035975 | 42.380 | 479 | 245 | 10 | 30 | 491 | 27 | 491 | 5.72e-121 | 363 |
| MsG0380012455.01.T01 | MTR_5g009970 | 44.776 | 402 | 209 | 4 | 91 | 489 | 1 | 392 | 7.24e-118 | 352 |
| MsG0380012455.01.T01 | MTR_1g088190 | 42.495 | 473 | 228 | 9 | 30 | 490 | 39 | 479 | 9.23e-118 | 355 |
| MsG0380012455.01.T01 | MTR_3g113720 | 39.958 | 478 | 255 | 8 | 31 | 491 | 58 | 520 | 1.89e-114 | 348 |
| MsG0380012455.01.T01 | MTR_8g075990 | 38.494 | 478 | 262 | 8 | 31 | 491 | 64 | 526 | 2.06e-100 | 312 |
| MsG0380012455.01.T01 | MTR_5g009970 | 45.210 | 334 | 170 | 4 | 159 | 489 | 1 | 324 | 7.70e-92 | 283 |
| MsG0380012455.01.T01 | MTR_2g028480 | 38.171 | 503 | 247 | 16 | 30 | 492 | 111 | 589 | 9.42e-88 | 281 |
| MsG0380012455.01.T01 | MTR_3g090540 | 33.271 | 532 | 284 | 17 | 8 | 492 | 76 | 583 | 4.93e-82 | 266 |
| MsG0380012455.01.T01 | MTR_3g082440 | 35.600 | 500 | 261 | 17 | 30 | 492 | 116 | 591 | 3.27e-78 | 256 |
| MsG0380012455.01.T01 | MTR_1g088190 | 42.357 | 314 | 139 | 7 | 30 | 332 | 39 | 321 | 5.52e-70 | 227 |
| MsG0380012455.01.T01 | MTR_1g111340 | 58.282 | 163 | 34 | 2 | 257 | 419 | 1 | 129 | 2.88e-52 | 173 |
| MsG0380012455.01.T01 | MTR_7g108925 | 42.384 | 151 | 85 | 2 | 341 | 490 | 50 | 199 | 2.54e-33 | 126 |
| MsG0380012455.01.T01 | MTR_1g037320 | 42.857 | 189 | 95 | 2 | 91 | 276 | 1 | 179 | 3.74e-31 | 122 |
| MsG0380012455.01.T01 | MTR_1g037320 | 41.803 | 122 | 69 | 2 | 367 | 487 | 169 | 289 | 2.08e-23 | 100 |
| MsG0380012455.01.T01 | MTR_0393s0050 | 42.308 | 130 | 74 | 1 | 340 | 468 | 26 | 155 | 1.11e-23 | 98.6 |
| MsG0380012455.01.T01 | MTR_4g128810 | 31.349 | 252 | 130 | 10 | 249 | 492 | 117 | 333 | 1.62e-22 | 99.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012455.01.T01 | AT3G43860 | 67.490 | 486 | 145 | 3 | 9 | 491 | 10 | 485 | 0.0 | 672 |
| MsG0380012455.01.T01 | AT3G43860 | 67.490 | 486 | 145 | 3 | 9 | 491 | 10 | 485 | 0.0 | 672 |
| MsG0380012455.01.T01 | AT4G11050 | 47.379 | 477 | 225 | 6 | 30 | 491 | 26 | 491 | 1.11e-147 | 433 |
| MsG0380012455.01.T01 | AT4G11050 | 47.379 | 477 | 225 | 6 | 30 | 491 | 26 | 491 | 6.75e-147 | 434 |
| MsG0380012455.01.T01 | AT4G11050 | 47.379 | 477 | 225 | 6 | 30 | 491 | 26 | 491 | 6.91e-147 | 434 |
| MsG0380012455.01.T01 | AT4G09740 | 47.425 | 466 | 231 | 5 | 29 | 491 | 22 | 476 | 3.76e-143 | 419 |
| MsG0380012455.01.T01 | AT4G23560 | 47.629 | 464 | 229 | 5 | 31 | 491 | 24 | 476 | 9.48e-143 | 419 |
| MsG0380012455.01.T01 | AT1G64390 | 45.912 | 477 | 232 | 6 | 30 | 491 | 25 | 490 | 2.35e-141 | 420 |
| MsG0380012455.01.T01 | AT2G32990 | 45.607 | 478 | 234 | 6 | 27 | 488 | 36 | 503 | 2.32e-139 | 412 |
| MsG0380012455.01.T01 | AT4G02290 | 45.551 | 472 | 233 | 7 | 30 | 490 | 52 | 510 | 5.11e-137 | 405 |
| MsG0380012455.01.T01 | AT1G70710 | 43.460 | 474 | 242 | 8 | 30 | 491 | 28 | 487 | 1.15e-132 | 393 |
| MsG0380012455.01.T01 | AT1G02800 | 45.339 | 472 | 232 | 8 | 30 | 490 | 43 | 499 | 1.39e-132 | 394 |
| MsG0380012455.01.T01 | AT1G23210 | 42.616 | 474 | 246 | 8 | 30 | 491 | 28 | 487 | 2.15e-129 | 385 |
| MsG0380012455.01.T01 | AT1G71380 | 44.255 | 470 | 241 | 7 | 30 | 491 | 24 | 480 | 5.04e-126 | 376 |
| MsG0380012455.01.T01 | AT1G22880 | 43.830 | 470 | 243 | 7 | 30 | 491 | 24 | 480 | 4.59e-125 | 374 |
| MsG0380012455.01.T01 | AT4G39010 | 41.494 | 482 | 256 | 9 | 24 | 491 | 23 | 492 | 1.81e-124 | 372 |
| MsG0380012455.01.T01 | AT2G44550 | 42.827 | 467 | 246 | 6 | 30 | 487 | 33 | 487 | 4.06e-124 | 371 |
| MsG0380012455.01.T01 | AT2G44540 | 42.292 | 480 | 253 | 8 | 22 | 489 | 23 | 490 | 3.98e-122 | 366 |
| MsG0380012455.01.T01 | AT1G19940 | 42.949 | 468 | 239 | 8 | 30 | 484 | 48 | 500 | 1.15e-119 | 361 |
| MsG0380012455.01.T01 | AT1G19940 | 42.949 | 468 | 239 | 8 | 30 | 484 | 48 | 500 | 1.15e-119 | 361 |
| MsG0380012455.01.T01 | AT2G44560 | 41.200 | 500 | 270 | 8 | 1 | 490 | 6 | 491 | 6.49e-119 | 358 |
| MsG0380012455.01.T01 | AT2G44570 | 42.348 | 477 | 252 | 8 | 25 | 490 | 28 | 492 | 6.99e-118 | 355 |
| MsG0380012455.01.T01 | AT1G48930 | 42.526 | 475 | 247 | 6 | 29 | 488 | 29 | 492 | 7.75e-118 | 360 |
| MsG0380012455.01.T01 | AT4G39000 | 40.000 | 475 | 261 | 6 | 30 | 491 | 25 | 488 | 3.14e-114 | 346 |
| MsG0380012455.01.T01 | AT1G75680 | 43.103 | 464 | 234 | 9 | 31 | 480 | 58 | 505 | 9.26e-114 | 346 |
| MsG0380012455.01.T01 | AT4G38990 | 39.875 | 479 | 253 | 10 | 30 | 487 | 23 | 487 | 9.65e-110 | 335 |
| MsG0380012455.01.T01 | AT4G02290 | 42.579 | 411 | 212 | 7 | 91 | 490 | 1 | 398 | 1.11e-103 | 316 |
| MsG0380012455.01.T01 | AT1G22880 | 41.565 | 409 | 218 | 7 | 91 | 491 | 1 | 396 | 3.96e-98 | 301 |
| MsG0380012455.01.T01 | AT4G39010 | 40.476 | 378 | 201 | 7 | 24 | 388 | 23 | 389 | 7.26e-98 | 300 |
| MsG0380012455.01.T01 | AT1G19940 | 41.779 | 371 | 192 | 6 | 30 | 387 | 48 | 407 | 4.51e-88 | 276 |
| MsG0380012455.01.T01 | AT2G44570 | 41.555 | 373 | 196 | 7 | 25 | 387 | 28 | 388 | 1.08e-83 | 265 |
| MsG0380012455.01.T01 | AT5G49720 | 37.500 | 504 | 249 | 18 | 30 | 492 | 108 | 586 | 1.33e-83 | 271 |
| MsG0380012455.01.T01 | AT1G22880 | 46.129 | 310 | 148 | 5 | 30 | 332 | 24 | 321 | 2.23e-80 | 254 |
| MsG0380012455.01.T01 | AT4G24260 | 37.149 | 498 | 259 | 18 | 30 | 492 | 108 | 586 | 7.90e-77 | 253 |
| MsG0380012455.01.T01 | AT1G65610 | 35.412 | 497 | 265 | 17 | 30 | 492 | 116 | 590 | 3.17e-76 | 251 |
| MsG0380012455.01.T01 | AT4G38990 | 39.067 | 343 | 174 | 6 | 30 | 366 | 23 | 336 | 1.61e-71 | 231 |
| MsG0380012455.01.T01 | AT4G24260 | 34.509 | 397 | 205 | 15 | 30 | 387 | 108 | 488 | 2.48e-48 | 174 |
| MsG0380012455.01.T01 | AT4G24260 | 35.398 | 339 | 167 | 13 | 30 | 332 | 108 | 430 | 1.37e-44 | 163 |
| MsG0380012455.01.T01 | AT3G42153 | 40.426 | 94 | 51 | 3 | 246 | 334 | 16 | 109 | 5.96e-14 | 68.6 |
Find 129 sgRNAs with CRISPR-Local
Find 193 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTACATATAATCTATTTATT+TGG | 0.102157 | 3:+16755680 | None:intergenic |
| CTTGAACTCCAGCATATTTA+AGG | 0.121059 | 3:+16754987 | None:intergenic |
| TAAGAAAATAAATAAATTTA+AGG | 0.183614 | 3:-16756658 | MsG0380012455.01.T01:five_prime_UTR |
| TCTAGCAAAGCTTGCTTCTT+TGG | 0.193643 | 3:-16753910 | MsG0380012455.01.T01:CDS |
| TTATATACTTACTTGCATTT+TGG | 0.202567 | 3:+16754605 | None:intergenic |
| AAACAGATGGATTACATATT+AGG | 0.203643 | 3:-16754212 | MsG0380012455.01.T01:intron |
| TCGAAAAGCTGCCAGGAAAT+TGG | 0.221214 | 3:+16755290 | None:intergenic |
| AGTAACTACTTCTTTGATTT+AGG | 0.237447 | 3:+16756516 | None:intergenic |
| GGAAACTCCCTCCCAATAAT+AGG | 0.247610 | 3:-16756193 | MsG0380012455.01.T01:CDS |
| AGGAGACGACGAGCATATTT+AGG | 0.253760 | 3:+16755493 | None:intergenic |
| TCTCCAAGGGACCCTATTAT+TGG | 0.258473 | 3:+16756181 | None:intergenic |
| ATTGAATAGGTTGACCTATC+AGG | 0.261586 | 3:-16755877 | MsG0380012455.01.T01:intron |
| CCAAATCCACATGAGCTAAC+TGG | 0.270045 | 3:-16754038 | MsG0380012455.01.T01:CDS |
| GTTATAATGACTAATTTCTA+TGG | 0.282964 | 3:+16753791 | None:intergenic |
| CTAGCAAAGCTTGCTTCTTT+GGG | 0.289529 | 3:-16753909 | MsG0380012455.01.T01:CDS |
| AGATCATACATGGTAGGATT+TGG | 0.292392 | 3:-16754173 | MsG0380012455.01.T01:CDS |
| TGGATAATAAAAGAGTATAT+TGG | 0.293882 | 3:-16756334 | MsG0380012455.01.T01:CDS |
| GCTGGAGACAATGTGAAATA+TGG | 0.300456 | 3:-16755841 | MsG0380012455.01.T01:CDS |
| CCCTTCTACTGCTCCTATTC+AGG | 0.300909 | 3:-16755227 | MsG0380012455.01.T01:CDS |
| CCAGTTAGCTCATGTGGATT+TGG | 0.301161 | 3:+16754038 | None:intergenic |
| TCTCCTCAATAAAGCAAAAT+TGG | 0.304496 | 3:-16755476 | MsG0380012455.01.T01:intron |
| TACATATAATCTATTTATTT+GGG | 0.317155 | 3:+16755681 | None:intergenic |
| TTCTTAGAGGCGCAAAGATC+AGG | 0.334942 | 3:-16756215 | MsG0380012455.01.T01:CDS |
| AATAGATTATATGTAGAGAT+AGG | 0.337233 | 3:-16755673 | MsG0380012455.01.T01:CDS |
| ATTTGAATCAACAAATGAAA+TGG | 0.338484 | 3:-16755758 | MsG0380012455.01.T01:CDS |
| ATTTGCTTGTAAGGACTATC+AGG | 0.344561 | 3:+16754878 | None:intergenic |
| ACTTCTTTGATTTAGGTGTT+TGG | 0.347511 | 3:+16756523 | None:intergenic |
| AAAATCTCTCATCTTCTTAG+AGG | 0.350453 | 3:-16756228 | MsG0380012455.01.T01:CDS |
| AACAGATGGATTACATATTA+GGG | 0.358207 | 3:-16754211 | MsG0380012455.01.T01:intron |
| GTCAAATTGATTTGCTTGTA+AGG | 0.358875 | 3:+16754869 | None:intergenic |
| ACCATGTATGATCTTCCTTC+AGG | 0.359145 | 3:+16754182 | None:intergenic |
| ATTTATTTCTCCCAATTTCC+TGG | 0.363292 | 3:-16755301 | MsG0380012455.01.T01:CDS |
| CGAAAAGCTGCCAGGAAATT+GGG | 0.377748 | 3:+16755291 | None:intergenic |
| GCCTGAATAGGAGCAGTAGA+AGG | 0.378778 | 3:+16755226 | None:intergenic |
| CAACAATGGTGATCATCAAC+TGG | 0.379312 | 3:+16755646 | None:intergenic |
| AGGAAACATGATACTTGTTA+AGG | 0.381146 | 3:-16756279 | MsG0380012455.01.T01:CDS |
| GGATAATAAAAGAGTATATT+GGG | 0.382943 | 3:-16756333 | MsG0380012455.01.T01:CDS |
| ATATTCAAAATGCCATTAGA+TGG | 0.385203 | 3:-16755732 | MsG0380012455.01.T01:CDS |
| GATCATACATGGTAGGATTT+GGG | 0.403815 | 3:-16754172 | MsG0380012455.01.T01:CDS |
| TATGTGCAAGGTTCGGTCTT+AGG | 0.410154 | 3:+16753957 | None:intergenic |
| CAAATCCACATGAGCTAACT+GGG | 0.410353 | 3:-16754037 | MsG0380012455.01.T01:CDS |
| CTCCAAGGGACCCTATTATT+GGG | 0.421960 | 3:+16756182 | None:intergenic |
| TTAGCACTGAAGCATCTCTA+TGG | 0.423244 | 3:+16754126 | None:intergenic |
| CTATGGTGAGCTTGTGTTGG+TGG | 0.424826 | 3:+16754143 | None:intergenic |
| CGCCAATTCGAAAAGCTGCC+AGG | 0.428500 | 3:+16755283 | None:intergenic |
| TCACAGTTACTACATTATCA+TGG | 0.429191 | 3:-16755804 | MsG0380012455.01.T01:CDS |
| ATAATCTGTACCCCATCTAA+TGG | 0.430183 | 3:+16755720 | None:intergenic |
| GGACAGTTTATCTCTTCGTT+TGG | 0.432535 | 3:+16754095 | None:intergenic |
| AGCTGAAACTTCTGCTGCTA+TGG | 0.438179 | 3:-16755548 | MsG0380012455.01.T01:CDS |
| TAGCCATTTCTTAAAGCTTG+TGG | 0.441135 | 3:+16754073 | None:intergenic |
| AAAGTACTAGTAAGTTTAAG+AGG | 0.443676 | 3:+16756578 | None:intergenic |
| TAACAAGTATCATGTTTCCT+TGG | 0.445707 | 3:+16756282 | None:intergenic |
| GTCCCACAAGCTTTAAGAAA+TGG | 0.446283 | 3:-16754076 | MsG0380012455.01.T01:CDS |
| ACATACATTATAGCCTGAAT+AGG | 0.446803 | 3:+16755214 | None:intergenic |
| TTGAACTTGTCGTTGATGTC+AGG | 0.451159 | 3:+16753999 | None:intergenic |
| GAATTGGCGAAATCTCATAA+AGG | 0.452861 | 3:-16755269 | MsG0380012455.01.T01:CDS |
| GAAACTCCCTCCCAATAATA+GGG | 0.459252 | 3:-16756192 | MsG0380012455.01.T01:CDS |
| TTTGAATCAACAAATGAAAT+GGG | 0.459589 | 3:-16755757 | MsG0380012455.01.T01:CDS |
| AGTTGGGACCTTAAATATGC+TGG | 0.461271 | 3:-16754995 | MsG0380012455.01.T01:CDS |
| TCTCATAAAGGAACCTATGA+TGG | 0.468029 | 3:-16755257 | MsG0380012455.01.T01:CDS |
| CTCCCAATAATAGGGTCCCT+TGG | 0.468192 | 3:-16756184 | MsG0380012455.01.T01:CDS |
| GGAAACATGATACTTGTTAA+GGG | 0.470689 | 3:-16756278 | MsG0380012455.01.T01:CDS |
| GGAGACTCAGCAATGGATGA+TGG | 0.473201 | 3:-16756158 | MsG0380012455.01.T01:CDS |
| ACATGGCTTGCTTTGTTCCA+AGG | 0.473298 | 3:-16756299 | MsG0380012455.01.T01:CDS |
| AGCCATTTCTTAAAGCTTGT+GGG | 0.474167 | 3:+16754074 | None:intergenic |
| ACTTGCCAAATATAATCAAA+AGG | 0.476084 | 3:-16754676 | MsG0380012455.01.T01:CDS |
| TTGAATAGGTTGACCTATCA+GGG | 0.476637 | 3:-16755876 | MsG0380012455.01.T01:intron |
| ATAGATTATATGTAGAGATA+GGG | 0.479248 | 3:-16755672 | MsG0380012455.01.T01:CDS |
| GAGCTAACTGGGGCCATTGT+TGG | 0.483453 | 3:-16754026 | MsG0380012455.01.T01:CDS |
| GAAGGGACATTCTCCATCAT+AGG | 0.487500 | 3:+16755244 | None:intergenic |
| TATTCAAAATGCCATTAGAT+GGG | 0.489997 | 3:-16755731 | MsG0380012455.01.T01:CDS |
| TTCTGCTTGTTTGTGATGGC+GGG | 0.494151 | 3:+16756553 | None:intergenic |
| AAGCAAATCAATTTGACTCC+TGG | 0.494274 | 3:-16754863 | MsG0380012455.01.T01:intron |
| AGTTGATGATCACCATTGTT+GGG | 0.498423 | 3:-16755644 | MsG0380012455.01.T01:CDS |
| CAGTTGATGATCACCATTGT+TGG | 0.502750 | 3:-16755645 | MsG0380012455.01.T01:CDS |
| TGCTAGAACACCGGCTGCAA+GGG | 0.505101 | 3:+16753926 | None:intergenic |
| TAAGGGTCAATTTAATTACA+AGG | 0.517252 | 3:-16756261 | MsG0380012455.01.T01:CDS |
| TTGCTGAGTCTCCTCTCCAA+GGG | 0.521853 | 3:+16756168 | None:intergenic |
| CACAGTTACTACATTATCAT+GGG | 0.527654 | 3:-16755803 | MsG0380012455.01.T01:CDS |
| TTGCTAGAACACCGGCTGCA+AGG | 0.530745 | 3:+16753925 | None:intergenic |
| TCTCTATGGTGAGCTTGTGT+TGG | 0.530919 | 3:+16754140 | None:intergenic |
| TACGTTAATTCCCTTGCAGC+CGG | 0.531438 | 3:-16753936 | MsG0380012455.01.T01:CDS |
| ATGTATAGGATGAGCTAATG+TGG | 0.532805 | 3:-16755108 | MsG0380012455.01.T01:intron |
| CTAGTGTTGCAGAATTCAGT+TGG | 0.541518 | 3:-16755012 | MsG0380012455.01.T01:CDS |
| AAATAAAATGAAACAAACTC+AGG | 0.544833 | 3:+16756614 | None:intergenic |
| CTAACTGGGGCCATTGTTGG+TGG | 0.545679 | 3:-16754023 | MsG0380012455.01.T01:CDS |
| GCTGGTGGCATATTGTGTAT+TGG | 0.548328 | 3:+16754731 | None:intergenic |
| TTTGGCAAAATCAAGGAGAT+GGG | 0.548916 | 3:+16754623 | None:intergenic |
| CTGGAGACAATGTGAAATAT+GGG | 0.550838 | 3:-16755840 | MsG0380012455.01.T01:CDS |
| ATTGCTGAGTCTCCTCTCCA+AGG | 0.554564 | 3:+16756167 | None:intergenic |
| ATGGCCCCAGTTAGCTCATG+TGG | 0.556380 | 3:+16754032 | None:intergenic |
| AGCAAGCTTTGCTAGAACAC+CGG | 0.556441 | 3:+16753917 | None:intergenic |
| TCTTAGAGGCGCAAAGATCA+GGG | 0.558185 | 3:-16756214 | MsG0380012455.01.T01:CDS |
| CTTGAAGCATTTAAAGCACA+TGG | 0.561349 | 3:-16754926 | MsG0380012455.01.T01:CDS |
| TTTCTGCTTGTTTGTGATGG+CGG | 0.563290 | 3:+16756552 | None:intergenic |
| TAGTGTTGCAGAATTCAGTT+GGG | 0.566041 | 3:-16755011 | MsG0380012455.01.T01:CDS |
| GGGTTTATTCATATGAGAGA+TGG | 0.573447 | 3:-16754756 | MsG0380012455.01.T01:CDS |
| TATAATCAAAAGGTCAAATG+TGG | 0.574640 | 3:-16754666 | MsG0380012455.01.T01:CDS |
| ATTAACGTATGTGCAAGGTT+CGG | 0.574763 | 3:+16753950 | None:intergenic |
| CATGGCTATACATGGCAACA+AGG | 0.579656 | 3:-16755078 | MsG0380012455.01.T01:CDS |
| TCCTGAAGGAAGATCATACA+TGG | 0.586107 | 3:-16754183 | MsG0380012455.01.T01:CDS |
| GGCTGCAACATGGCTATACA+TGG | 0.586171 | 3:-16755086 | MsG0380012455.01.T01:CDS |
| TCAGCTGCAATCTCAGTACC+AGG | 0.587163 | 3:+16755565 | None:intergenic |
| CCTGAATAGGAGCAGTAGAA+GGG | 0.590602 | 3:+16755227 | None:intergenic |
| TAGATTATATGTAGAGATAG+GGG | 0.592704 | 3:-16755671 | MsG0380012455.01.T01:CDS |
| GATGTCAGGTCCACCAACAA+TGG | 0.594292 | 3:+16754013 | None:intergenic |
| AATAAAATGAAACAAACTCA+GGG | 0.602108 | 3:+16756615 | None:intergenic |
| AGCTAATGTGGGCTGCAACA+TGG | 0.614595 | 3:-16755096 | MsG0380012455.01.T01:CDS |
| GAAGGAAGATCATACATGGT+AGG | 0.615068 | 3:-16754179 | MsG0380012455.01.T01:CDS |
| AAATGAAACAAACTCAGGGA+TGG | 0.617223 | 3:+16756619 | None:intergenic |
| GTAGTAACTGTGAATGCCAT+TGG | 0.617815 | 3:+16755814 | None:intergenic |
| AAGGGACCCTATTATTGGGA+GGG | 0.618747 | 3:+16756186 | None:intergenic |
| AGTGAACAAGAAAGATGTGC+TGG | 0.624046 | 3:+16754713 | None:intergenic |
| AATAATAGGGTCCCTTGGAG+AGG | 0.629528 | 3:-16756179 | MsG0380012455.01.T01:CDS |
| CAAGGGACCCTATTATTGGG+AGG | 0.629896 | 3:+16756185 | None:intergenic |
| TGTGAAATATGGGCTACCAA+TGG | 0.631971 | 3:-16755830 | MsG0380012455.01.T01:CDS |
| GCTTGTAAGGACTATCAGGA+AGG | 0.637627 | 3:+16754882 | None:intergenic |
| TTAATTGATACTAACACACC+TGG | 0.639765 | 3:-16755583 | MsG0380012455.01.T01:CDS |
| TGTATAGGATGAGCTAATGT+GGG | 0.640123 | 3:-16755107 | MsG0380012455.01.T01:intron |
| TTGGAGAGGAGACTCAGCAA+TGG | 0.645168 | 3:-16756165 | MsG0380012455.01.T01:CDS |
| ATTCAAAATGCCATTAGATG+GGG | 0.646428 | 3:-16755730 | MsG0380012455.01.T01:CDS |
| AGGGAATTAACGTATGTGCA+AGG | 0.656102 | 3:+16753945 | None:intergenic |
| AACAATGGTGATCATCAACT+GGG | 0.657794 | 3:+16755647 | None:intergenic |
| ATTGGGTCATCATTGCAACA+TGG | 0.666261 | 3:-16756316 | MsG0380012455.01.T01:CDS |
| TTTCTGGTGGTGCCCAACAA+TGG | 0.671282 | 3:+16755632 | None:intergenic |
| TGAATAGGTTGACCTATCAG+GGG | 0.682641 | 3:-16755875 | MsG0380012455.01.T01:intron |
| GAATAGGTTGACCTATCAGG+GGG | 0.686550 | 3:-16755874 | MsG0380012455.01.T01:intron |
| GAACAAGAAAGATGTGCTGG+TGG | 0.714032 | 3:+16754716 | None:intergenic |
| AAATCCACATGAGCTAACTG+GGG | 0.756843 | 3:-16754036 | MsG0380012455.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACATATAATCTATTTATTT+GGG | + | Chr3:16754787-16754806 | None:intergenic | 10.0% |
| !!! | AAATAATGTATTTTCTTAAA+GGG | + | Chr3:16755900-16755919 | None:intergenic | 10.0% |
| !!! | TAAATAATGTATTTTCTTAA+AGG | + | Chr3:16755901-16755920 | None:intergenic | 10.0% |
| !! | ATATTTAAATATGATTATGC+AGG | - | Chr3:16755685-16755704 | MsG0380012455.01.T01:CDS | 15.0% |
| !! | CTACATATAATCTATTTATT+TGG | + | Chr3:16754788-16754807 | None:intergenic | 15.0% |
| !!! | TTGATTTTATTGAATTGAAT+AGG | - | Chr3:16754575-16754594 | MsG0380012455.01.T01:intron | 15.0% |
| !! | AAATAAAATGAAACAAACTC+AGG | + | Chr3:16753854-16753873 | None:intergenic | 20.0% |
| !! | AATAAAATGAAACAAACTCA+GGG | + | Chr3:16753853-16753872 | None:intergenic | 20.0% |
| !! | AATAGATTATATGTAGAGAT+AGG | - | Chr3:16754792-16754811 | MsG0380012455.01.T01:intron | 20.0% |
| !! | ACGTAGAAAATGAATAATTT+GGG | - | Chr3:16754543-16754562 | MsG0380012455.01.T01:intron | 20.0% |
| !! | ACTAAGAGTGAATTAATATT+GGG | - | Chr3:16755305-16755324 | MsG0380012455.01.T01:CDS | 20.0% |
| !! | ATAGATTATATGTAGAGATA+GGG | - | Chr3:16754793-16754812 | MsG0380012455.01.T01:intron | 20.0% |
| !! | ATTTGAATCAACAAATGAAA+TGG | - | Chr3:16754707-16754726 | MsG0380012455.01.T01:CDS | 20.0% |
| !! | CTCAAAACAAAATCATTATT+AGG | - | Chr3:16754357-16754376 | MsG0380012455.01.T01:intron | 20.0% |
| !! | GTTATAATGACTAATTTCTA+TGG | + | Chr3:16756677-16756696 | None:intergenic | 20.0% |
| !! | TAAATAAGTGGTTATGTTTA+TGG | + | Chr3:16754020-16754039 | None:intergenic | 20.0% |
| !! | TACGTAGAAAATGAATAATT+TGG | - | Chr3:16754542-16754561 | MsG0380012455.01.T01:intron | 20.0% |
| !! | TCTATATTGTTTATTTCCAA+AGG | + | Chr3:16756209-16756228 | None:intergenic | 20.0% |
| !! | TTATCCCAATAAAAAAAAGT+TGG | + | Chr3:16754107-16754126 | None:intergenic | 20.0% |
| !! | TTTGAATCAACAAATGAAAT+GGG | - | Chr3:16754708-16754727 | MsG0380012455.01.T01:CDS | 20.0% |
| !!! | ATGAAATTGATCTTCAATTT+TGG | + | Chr3:16754438-16754457 | None:intergenic | 20.0% |
| !!! | CATTTTTCTTAACATGTAAT+TGG | + | Chr3:16755066-16755085 | None:intergenic | 20.0% |
| !!! | GATAATTCAACTTTTTCTAA+TGG | - | Chr3:16754484-16754503 | MsG0380012455.01.T01:intron | 20.0% |
| !!! | GGATAATAAAAGAGTATATT+GGG | - | Chr3:16754132-16754151 | MsG0380012455.01.T01:CDS | 20.0% |
| !!! | TCTACCAACTTTTTTTTATT+GGG | - | Chr3:16754100-16754119 | MsG0380012455.01.T01:CDS | 20.0% |
| !!! | TGGATAATAAAAGAGTATAT+TGG | - | Chr3:16754131-16754150 | MsG0380012455.01.T01:CDS | 20.0% |
| !!! | TTATATACTTACTTGCATTT+TGG | + | Chr3:16755863-16755882 | None:intergenic | 20.0% |
| !!! | TTCTACCAACTTTTTTTTAT+TGG | - | Chr3:16754099-16754118 | MsG0380012455.01.T01:CDS | 20.0% |
| !!! | TTTGACCTTTTGATTATATT+TGG | + | Chr3:16755797-16755816 | None:intergenic | 20.0% |
| !!! | TTTTTTATTGGGATAATTCA+TGG | - | Chr3:16754111-16754130 | MsG0380012455.01.T01:CDS | 20.0% |
| ! | AAATGTACATGTAATTTACC+AGG | + | Chr3:16755623-16755642 | None:intergenic | 25.0% |
| ! | ACTTGCCAAATATAATCAAA+AGG | - | Chr3:16755789-16755808 | MsG0380012455.01.T01:CDS | 25.0% |
| ! | ATATTCAAAATGCCATTAGA+TGG | - | Chr3:16754733-16754752 | MsG0380012455.01.T01:CDS | 25.0% |
| ! | ATGTAATTGGTATATTGTCT+AGG | + | Chr3:16755053-16755072 | None:intergenic | 25.0% |
| ! | ATGTTTGTGAAATGTGTATT+GGG | + | Chr3:16754064-16754083 | None:intergenic | 25.0% |
| ! | CACTAAGAGTGAATTAATAT+TGG | - | Chr3:16755304-16755323 | MsG0380012455.01.T01:CDS | 25.0% |
| ! | TAAGGGTCAATTTAATTACA+AGG | - | Chr3:16754204-16754223 | MsG0380012455.01.T01:CDS | 25.0% |
| ! | TAGAGTGATTGTCTAATATT+TGG | - | Chr3:16756225-16756244 | MsG0380012455.01.T01:CDS | 25.0% |
| ! | TAGATTATATGTAGAGATAG+GGG | - | Chr3:16754794-16754813 | MsG0380012455.01.T01:intron | 25.0% |
| ! | TATAAAGACGTGTAAATAAG+TGG | + | Chr3:16754032-16754051 | None:intergenic | 25.0% |
| ! | TATAATCAAAAGGTCAAATG+TGG | - | Chr3:16755799-16755818 | MsG0380012455.01.T01:CDS | 25.0% |
| ! | TATTCAAAATGCCATTAGAT+GGG | - | Chr3:16754734-16754753 | MsG0380012455.01.T01:CDS | 25.0% |
| ! | TGTTAAAAATGTAGTTGAGA+GGG | - | Chr3:16756621-16756640 | MsG0380012455.01.T01:five_prime_UTR | 25.0% |
| ! | TTAAATATGATTATGCAGGT+GGG | - | Chr3:16755689-16755708 | MsG0380012455.01.T01:CDS | 25.0% |
| ! | TTAATGTGATGCATATGTAT+AGG | - | Chr3:16755343-16755362 | MsG0380012455.01.T01:intron | 25.0% |
| ! | TTGTTAAAAATGTAGTTGAG+AGG | - | Chr3:16756620-16756639 | MsG0380012455.01.T01:five_prime_UTR | 25.0% |
| ! | TTTAAATATGATTATGCAGG+TGG | - | Chr3:16755688-16755707 | MsG0380012455.01.T01:CDS | 25.0% |
| ! | TTTGTCTCTAAATATTAGTG+AGG | - | Chr3:16754412-16754431 | MsG0380012455.01.T01:intron | 25.0% |
| !! | AAAGTACTAGTAAGTTTAAG+AGG | + | Chr3:16753890-16753909 | None:intergenic | 25.0% |
| !! | AACTACATTTTTAACAACGT+TGG | + | Chr3:16756617-16756636 | None:intergenic | 25.0% |
| !! | AATCTACTACAACTTTTAGT+AGG | + | Chr3:16756652-16756671 | None:intergenic | 25.0% |
| !! | ACTACATTTTTAACAACGTT+GGG | + | Chr3:16756616-16756635 | None:intergenic | 25.0% |
| !! | AGTAACTACTTCTTTGATTT+AGG | + | Chr3:16753952-16753971 | None:intergenic | 25.0% |
| !!! | AAACAGATGGATTACATATT+AGG | - | Chr3:16756253-16756272 | MsG0380012455.01.T01:CDS | 25.0% |
| !!! | AACAGATGGATTACATATTA+GGG | - | Chr3:16756254-16756273 | MsG0380012455.01.T01:CDS | 25.0% |
| !!! | AAGTTGGTAGAAATATTATG+AGG | + | Chr3:16754091-16754110 | None:intergenic | 25.0% |
| !!! | ATACCAATTTTGCTTTATTG+AGG | + | Chr3:16754995-16755014 | None:intergenic | 25.0% |
| !!! | TTACATTTTGAAGGTCAAAA+AGG | - | Chr3:16755515-16755534 | MsG0380012455.01.T01:CDS | 25.0% |
| AAAATCTCTCATCTTCTTAG+AGG | - | Chr3:16754237-16754256 | MsG0380012455.01.T01:intron | 30.0% | |
| ACATACATTATAGCCTGAAT+AGG | + | Chr3:16755254-16755273 | None:intergenic | 30.0% | |
| AGGATATGTTATAGCAACTT+TGG | + | Chr3:16756189-16756208 | None:intergenic | 30.0% | |
| AGTTGCTATAACATATCCTT+TGG | - | Chr3:16756190-16756209 | MsG0380012455.01.T01:CDS | 30.0% | |
| ATATTAGGGAAAAATCCTGA+AGG | - | Chr3:16756268-16756287 | MsG0380012455.01.T01:CDS | 30.0% | |
| ATATTCCCAACCAATACTAT+AGG | + | Chr3:16755135-16755154 | None:intergenic | 30.0% | |
| ATATTTGGATGGTAAACAGA+TGG | - | Chr3:16756240-16756259 | MsG0380012455.01.T01:CDS | 30.0% | |
| ATCAACATGCCTAAAAACAA+TGG | + | Chr3:16754952-16754971 | None:intergenic | 30.0% | |
| ATTCAAAATGCCATTAGATG+GGG | - | Chr3:16754735-16754754 | MsG0380012455.01.T01:CDS | 30.0% | |
| CACAGTTACTACATTATCAT+GGG | - | Chr3:16754662-16754681 | MsG0380012455.01.T01:CDS | 30.0% | |
| CACTCTTAGTGAATTAAGAA+AGG | + | Chr3:16755295-16755314 | None:intergenic | 30.0% | |
| GATGTTTGTGAAATGTGTAT+TGG | + | Chr3:16754065-16754084 | None:intergenic | 30.0% | |
| GTGATTGTCTAATATTTGGA+TGG | - | Chr3:16756229-16756248 | MsG0380012455.01.T01:CDS | 30.0% | |
| GTTGAAGTAACCTATAGTAT+TGG | - | Chr3:16755122-16755141 | MsG0380012455.01.T01:intron | 30.0% | |
| TAACAAGTATCATGTTTCCT+TGG | + | Chr3:16754186-16754205 | None:intergenic | 30.0% | |
| TCACAGTTACTACATTATCA+TGG | - | Chr3:16754661-16754680 | MsG0380012455.01.T01:CDS | 30.0% | |
| TCTCCTCAATAAAGCAAAAT+TGG | - | Chr3:16754989-16755008 | MsG0380012455.01.T01:CDS | 30.0% | |
| TTAATTGATACTAACACACC+TGG | - | Chr3:16754882-16754901 | MsG0380012455.01.T01:CDS | 30.0% | |
| ! | ACTTCTTTGATTTAGGTGTT+TGG | + | Chr3:16753945-16753964 | None:intergenic | 30.0% |
| ! | AGGAAACATGATACTTGTTA+AGG | - | Chr3:16754186-16754205 | MsG0380012455.01.T01:CDS | 30.0% |
| ! | ATTTATTTCTCCCAATTTCC+TGG | - | Chr3:16755164-16755183 | MsG0380012455.01.T01:intron | 30.0% |
| ! | CTACATTTTTAACAACGTTG+GGG | + | Chr3:16756615-16756634 | None:intergenic | 30.0% |
| ! | CTCTTTGTCTTCATATTTTC+TGG | + | Chr3:16754852-16754871 | None:intergenic | 30.0% |
| ! | GGAAACATGATACTTGTTAA+GGG | - | Chr3:16754187-16754206 | MsG0380012455.01.T01:CDS | 30.0% |
| ! | TATTTTCTGCTTGTTTGTGA+TGG | + | Chr3:16753919-16753938 | None:intergenic | 30.0% |
| ! | TTTGTCTTCATATTTTCTGG+TGG | + | Chr3:16754849-16754868 | None:intergenic | 30.0% |
| !! | AAGTAACCTATAGTATTGGT+TGG | - | Chr3:16755126-16755145 | MsG0380012455.01.T01:intron | 30.0% |
| !! | AGTAACCTATAGTATTGGTT+GGG | - | Chr3:16755127-16755146 | MsG0380012455.01.T01:intron | 30.0% |
| !! | GTCAAATTGATTTGCTTGTA+AGG | + | Chr3:16755599-16755618 | None:intergenic | 30.0% |
| AAATGAAACAAACTCAGGGA+TGG | + | Chr3:16753849-16753868 | None:intergenic | 35.0% | |
| AACAATGGTGATCATCAACT+GGG | + | Chr3:16754821-16754840 | None:intergenic | 35.0% | |
| AAGCAAATCAATTTGACTCC+TGG | - | Chr3:16755602-16755621 | MsG0380012455.01.T01:CDS | 35.0% | |
| AGATCATACATGGTAGGATT+TGG | - | Chr3:16756292-16756311 | MsG0380012455.01.T01:CDS | 35.0% | |
| AGCCATTTCTTAAAGCTTGT+GGG | + | Chr3:16756394-16756413 | None:intergenic | 35.0% | |
| ATAATCTGTACCCCATCTAA+TGG | + | Chr3:16754748-16754767 | None:intergenic | 35.0% | |
| ATGTATAGGATGAGCTAATG+TGG | - | Chr3:16755357-16755376 | MsG0380012455.01.T01:intron | 35.0% | |
| ATTAACGTATGTGCAAGGTT+CGG | + | Chr3:16756518-16756537 | None:intergenic | 35.0% | |
| ATTTGCTTGTAAGGACTATC+AGG | + | Chr3:16755590-16755609 | None:intergenic | 35.0% | |
| CTGGAGACAATGTGAAATAT+GGG | - | Chr3:16754625-16754644 | MsG0380012455.01.T01:CDS | 35.0% | |
| CTTGAACTCCAGCATATTTA+AGG | + | Chr3:16755481-16755500 | None:intergenic | 35.0% | |
| GAATTGGCGAAATCTCATAA+AGG | - | Chr3:16755196-16755215 | MsG0380012455.01.T01:intron | 35.0% | |
| GATCATACATGGTAGGATTT+GGG | - | Chr3:16756293-16756312 | MsG0380012455.01.T01:CDS | 35.0% | |
| GGGTTTATTCATATGAGAGA+TGG | - | Chr3:16755709-16755728 | MsG0380012455.01.T01:CDS | 35.0% | |
| TAGCCATTTCTTAAAGCTTG+TGG | + | Chr3:16756395-16756414 | None:intergenic | 35.0% | |
| TAGTGTTGCAGAATTCAGTT+GGG | - | Chr3:16755454-16755473 | MsG0380012455.01.T01:intron | 35.0% | |
| TCTCATAAAGGAACCTATGA+TGG | - | Chr3:16755208-16755227 | MsG0380012455.01.T01:intron | 35.0% | |
| TGTATAGGATGAGCTAATGT+GGG | - | Chr3:16755358-16755377 | MsG0380012455.01.T01:intron | 35.0% | |
| TTTGGCAAAATCAAGGAGAT+GGG | + | Chr3:16755845-16755864 | None:intergenic | 35.0% | |
| ! | ATTGAATAGGTTGACCTATC+AGG | - | Chr3:16754588-16754607 | MsG0380012455.01.T01:intron | 35.0% |
| ! | CTCACTCAGTTACATTTTGA+AGG | - | Chr3:16755506-16755525 | MsG0380012455.01.T01:CDS | 35.0% |
| ! | CTTGAAGCATTTAAAGCACA+TGG | - | Chr3:16755539-16755558 | MsG0380012455.01.T01:CDS | 35.0% |
| ! | TTGAATAGGTTGACCTATCA+GGG | - | Chr3:16754589-16754608 | MsG0380012455.01.T01:intron | 35.0% |
| ! | TTTTGGCAAAATCAAGGAGA+TGG | + | Chr3:16755846-16755865 | None:intergenic | 35.0% |
| !! | AGTTGATGATCACCATTGTT+GGG | - | Chr3:16754821-16754840 | MsG0380012455.01.T01:intron | 35.0% |
| !! | CTGCTTCTTCCATTGTTTTT+AGG | - | Chr3:16754940-16754959 | MsG0380012455.01.T01:CDS | 35.0% |
| !! | CTTGCATTTTGGCAAAATCA+AGG | + | Chr3:16755852-16755871 | None:intergenic | 35.0% |
| AAATCCACATGAGCTAACTG+GGG | - | Chr3:16756429-16756448 | MsG0380012455.01.T01:intron | 40.0% | |
| ACCATGTATGATCTTCCTTC+AGG | + | Chr3:16756286-16756305 | None:intergenic | 40.0% | |
| AGGGAATTAACGTATGTGCA+AGG | + | Chr3:16756523-16756542 | None:intergenic | 40.0% | |
| AGTGAACAAGAAAGATGTGC+TGG | + | Chr3:16755755-16755774 | None:intergenic | 40.0% | |
| AGTTGGGACCTTAAATATGC+TGG | - | Chr3:16755470-16755489 | MsG0380012455.01.T01:intron | 40.0% | |
| ATTGGGTCATCATTGCAACA+TGG | - | Chr3:16754149-16754168 | MsG0380012455.01.T01:CDS | 40.0% | |
| CAAATCCACATGAGCTAACT+GGG | - | Chr3:16756428-16756447 | MsG0380012455.01.T01:intron | 40.0% | |
| CAACAATGGTGATCATCAAC+TGG | + | Chr3:16754822-16754841 | None:intergenic | 40.0% | |
| CATCATAATATCCCCCTGAT+AGG | + | Chr3:16754605-16754624 | None:intergenic | 40.0% | |
| CTAGTGTTGCAGAATTCAGT+TGG | - | Chr3:16755453-16755472 | MsG0380012455.01.T01:intron | 40.0% | |
| GAAACTCCCTCCCAATAATA+GGG | - | Chr3:16754273-16754292 | MsG0380012455.01.T01:intron | 40.0% | |
| GAAGGAAGATCATACATGGT+AGG | - | Chr3:16756286-16756305 | MsG0380012455.01.T01:CDS | 40.0% | |
| GCTGCAACATCATACTACAT+CGG | + | Chr3:16756071-16756090 | None:intergenic | 40.0% | |
| GCTGGAGACAATGTGAAATA+TGG | - | Chr3:16754624-16754643 | MsG0380012455.01.T01:CDS | 40.0% | |
| GGACAGTTTATCTCTTCGTT+TGG | + | Chr3:16756373-16756392 | None:intergenic | 40.0% | |
| GTAGTAACTGTGAATGCCAT+TGG | + | Chr3:16754654-16754673 | None:intergenic | 40.0% | |
| TCCTGAAGGAAGATCATACA+TGG | - | Chr3:16756282-16756301 | MsG0380012455.01.T01:CDS | 40.0% | |
| TTGAACTTGTCGTTGATGTC+AGG | + | Chr3:16756469-16756488 | None:intergenic | 40.0% | |
| TTTCTGCTTGTTTGTGATGG+CGG | + | Chr3:16753916-16753935 | None:intergenic | 40.0% | |
| ! | CTAGCAAAGCTTGCTTCTTT+GGG | - | Chr3:16756556-16756575 | MsG0380012455.01.T01:five_prime_UTR | 40.0% |
| ! | TCTAGCAAAGCTTGCTTCTT+TGG | - | Chr3:16756555-16756574 | MsG0380012455.01.T01:five_prime_UTR | 40.0% |
| ! | TGAATAGGTTGACCTATCAG+GGG | - | Chr3:16754590-16754609 | MsG0380012455.01.T01:intron | 40.0% |
| ! | TGTGAAATATGGGCTACCAA+TGG | - | Chr3:16754635-16754654 | MsG0380012455.01.T01:CDS | 40.0% |
| ! | TTAGCACTGAAGCATCTCTA+TGG | + | Chr3:16756342-16756361 | None:intergenic | 40.0% |
| !! | ATTGTGGTATGGTGTTGTCA+CGG | + | Chr3:16756156-16756175 | None:intergenic | 40.0% |
| !! | CAGTTGATGATCACCATTGT+TGG | - | Chr3:16754820-16754839 | MsG0380012455.01.T01:intron | 40.0% |
| !! | GTCCCACAAGCTTTAAGAAA+TGG | - | Chr3:16756389-16756408 | MsG0380012455.01.T01:intron | 40.0% |
| AAGGGACCCTATTATTGGGA+GGG | + | Chr3:16754282-16754301 | None:intergenic | 45.0% | |
| AATAATAGGGTCCCTTGGAG+AGG | - | Chr3:16754286-16754305 | MsG0380012455.01.T01:intron | 45.0% | |
| ACACCATACCACAATCGTAG+AGG | - | Chr3:16756161-16756180 | MsG0380012455.01.T01:CDS | 45.0% | |
| AGCAAGCTTTGCTAGAACAC+CGG | + | Chr3:16756551-16756570 | None:intergenic | 45.0% | |
| AGCTGAAACTTCTGCTGCTA+TGG | - | Chr3:16754917-16754936 | MsG0380012455.01.T01:CDS | 45.0% | |
| AGGAGACGACGAGCATATTT+AGG | + | Chr3:16754975-16754994 | None:intergenic | 45.0% | |
| CATGGCTATACATGGCAACA+AGG | - | Chr3:16755387-16755406 | MsG0380012455.01.T01:intron | 45.0% | |
| CCAAATCCACATGAGCTAAC+TGG | - | Chr3:16756427-16756446 | MsG0380012455.01.T01:intron | 45.0% | |
| CCAGTTAGCTCATGTGGATT+TGG | + | Chr3:16756430-16756449 | None:intergenic | 45.0% | |
| CCTGAATAGGAGCAGTAGAA+GGG | + | Chr3:16755241-16755260 | None:intergenic | 45.0% | |
| CGAAAAGCTGCCAGGAAATT+GGG | + | Chr3:16755177-16755196 | None:intergenic | 45.0% | |
| CTCCAAGGGACCCTATTATT+GGG | + | Chr3:16754286-16754305 | None:intergenic | 45.0% | |
| CTTTGGATCCTCTACGATTG+TGG | + | Chr3:16756172-16756191 | None:intergenic | 45.0% | |
| GAACAAGAAAGATGTGCTGG+TGG | + | Chr3:16755752-16755771 | None:intergenic | 45.0% | |
| GAAGGGACATTCTCCATCAT+AGG | + | Chr3:16755224-16755243 | None:intergenic | 45.0% | |
| GATCCTCTACGATTGTGGTA+TGG | + | Chr3:16756167-16756186 | None:intergenic | 45.0% | |
| GCTGGTGGCATATTGTGTAT+TGG | + | Chr3:16755737-16755756 | None:intergenic | 45.0% | |
| GCTTGTAAGGACTATCAGGA+AGG | + | Chr3:16755586-16755605 | None:intergenic | 45.0% | |
| GGAAACTCCCTCCCAATAAT+AGG | - | Chr3:16754272-16754291 | MsG0380012455.01.T01:intron | 45.0% | |
| TACGTTAATTCCCTTGCAGC+CGG | - | Chr3:16756529-16756548 | MsG0380012455.01.T01:five_prime_UTR | 45.0% | |
| TCAGGGGGATATTATGATGC+TGG | - | Chr3:16754606-16754625 | MsG0380012455.01.T01:intron | 45.0% | |
| TCGAAAAGCTGCCAGGAAAT+TGG | + | Chr3:16755178-16755197 | None:intergenic | 45.0% | |
| TCTCCAAGGGACCCTATTAT+TGG | + | Chr3:16754287-16754306 | None:intergenic | 45.0% | |
| TCTCTATGGTGAGCTTGTGT+TGG | + | Chr3:16756328-16756347 | None:intergenic | 45.0% | |
| TTCTGCTTGTTTGTGATGGC+GGG | + | Chr3:16753915-16753934 | None:intergenic | 45.0% | |
| ! | GAATAGGTTGACCTATCAGG+GGG | - | Chr3:16754591-16754610 | MsG0380012455.01.T01:intron | 45.0% |
| ! | TATGTGCAAGGTTCGGTCTT+AGG | + | Chr3:16756511-16756530 | None:intergenic | 45.0% |
| ! | TCTTAGAGGCGCAAAGATCA+GGG | - | Chr3:16754251-16754270 | MsG0380012455.01.T01:intron | 45.0% |
| ! | TTCCTGGCAGCTTTTCGAAT+TGG | - | Chr3:16755180-16755199 | MsG0380012455.01.T01:intron | 45.0% |
| ! | TTCTTAGAGGCGCAAAGATC+AGG | - | Chr3:16754250-16754269 | MsG0380012455.01.T01:intron | 45.0% |
| !! | ACATGGCTTGCTTTGTTCCA+AGG | - | Chr3:16754166-16754185 | MsG0380012455.01.T01:CDS | 45.0% |
| !! | TAAGAAAATAAATAAATTTA+AGG | - | Chr3:16753807-16753826 | MsG0380012455.01.T01:three_prime_UTR | 5.0% |
| ATTGCTGAGTCTCCTCTCCA+AGG | + | Chr3:16754301-16754320 | None:intergenic | 50.0% | |
| CAAGGGACCCTATTATTGGG+AGG | + | Chr3:16754283-16754302 | None:intergenic | 50.0% | |
| CCCTTCTACTGCTCCTATTC+AGG | - | Chr3:16755238-16755257 | MsG0380012455.01.T01:CDS | 50.0% | |
| CTATGGTGAGCTTGTGTTGG+TGG | + | Chr3:16756325-16756344 | None:intergenic | 50.0% | |
| CTCCCAATAATAGGGTCCCT+TGG | - | Chr3:16754281-16754300 | MsG0380012455.01.T01:intron | 50.0% | |
| GATGTCAGGTCCACCAACAA+TGG | + | Chr3:16756455-16756474 | None:intergenic | 50.0% | |
| GCCTGAATAGGAGCAGTAGA+AGG | + | Chr3:16755242-16755261 | None:intergenic | 50.0% | |
| GGAGACTCAGCAATGGATGA+TGG | - | Chr3:16754307-16754326 | MsG0380012455.01.T01:intron | 50.0% | |
| GGCTGCAACATGGCTATACA+TGG | - | Chr3:16755379-16755398 | MsG0380012455.01.T01:intron | 50.0% | |
| TCAGCTGCAATCTCAGTACC+AGG | + | Chr3:16754903-16754922 | None:intergenic | 50.0% | |
| TTGCTGAGTCTCCTCTCCAA+GGG | + | Chr3:16754300-16754319 | None:intergenic | 50.0% | |
| TTGGAGAGGAGACTCAGCAA+TGG | - | Chr3:16754300-16754319 | MsG0380012455.01.T01:intron | 50.0% | |
| ! | AGCTAATGTGGGCTGCAACA+TGG | - | Chr3:16755369-16755388 | MsG0380012455.01.T01:intron | 50.0% |
| ! | TTTCTGGTGGTGCCCAACAA+TGG | + | Chr3:16754836-16754855 | None:intergenic | 50.0% |
| ATGGCCCCAGTTAGCTCATG+TGG | + | Chr3:16756436-16756455 | None:intergenic | 55.0% | |
| CGCCAATTCGAAAAGCTGCC+AGG | + | Chr3:16755185-16755204 | None:intergenic | 55.0% | |
| CTAACTGGGGCCATTGTTGG+TGG | - | Chr3:16756442-16756461 | MsG0380012455.01.T01:intron | 55.0% | |
| GAGCTAACTGGGGCCATTGT+TGG | - | Chr3:16756439-16756458 | MsG0380012455.01.T01:intron | 55.0% | |
| ! | TGCTAGAACACCGGCTGCAA+GGG | + | Chr3:16756542-16756561 | None:intergenic | 55.0% |
| ! | TTGCTAGAACACCGGCTGCA+AGG | + | Chr3:16756543-16756562 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 16753763 | 16756724 | 16753763 | ID=MsG0380012455.01;Name=MsG0380012455.01 |
| Chr3 | mRNA | 16753763 | 16756724 | 16753763 | ID=MsG0380012455.01.T01;Parent=MsG0380012455.01;Name=MsG0380012455.01.T01;_AED=0.49;_eAED=0.49;_QI=290|0.83|0.85|1|0.5|0.57|7|142|493 |
| Chr3 | exon | 16753763 | 16754228 | 16753763 | ID=MsG0380012455.01.T01:exon:21946;Parent=MsG0380012455.01.T01 |
| Chr3 | exon | 16754617 | 16754780 | 16754617 | ID=MsG0380012455.01.T01:exon:21945;Parent=MsG0380012455.01.T01 |
| Chr3 | exon | 16754864 | 16755122 | 16754864 | ID=MsG0380012455.01.T01:exon:21944;Parent=MsG0380012455.01.T01 |
| Chr3 | exon | 16755220 | 16755327 | 16755220 | ID=MsG0380012455.01.T01:exon:21943;Parent=MsG0380012455.01.T01 |
| Chr3 | exon | 16755477 | 16755890 | 16755477 | ID=MsG0380012455.01.T01:exon:21942;Parent=MsG0380012455.01.T01 |
| Chr3 | exon | 16756145 | 16756391 | 16756145 | ID=MsG0380012455.01.T01:exon:21941;Parent=MsG0380012455.01.T01 |
| Chr3 | exon | 16756469 | 16756724 | 16756469 | ID=MsG0380012455.01.T01:exon:21940;Parent=MsG0380012455.01.T01 |
| Chr3 | five_prime_UTR | 16756469 | 16756724 | 16756469 | ID=MsG0380012455.01.T01:five_prime_utr;Parent=MsG0380012455.01.T01 |
| Chr3 | five_prime_UTR | 16756358 | 16756391 | 16756358 | ID=MsG0380012455.01.T01:five_prime_utr;Parent=MsG0380012455.01.T01 |
| Chr3 | CDS | 16756145 | 16756357 | 16756145 | ID=MsG0380012455.01.T01:cds;Parent=MsG0380012455.01.T01 |
| Chr3 | CDS | 16755477 | 16755890 | 16755477 | ID=MsG0380012455.01.T01:cds;Parent=MsG0380012455.01.T01 |
| Chr3 | CDS | 16755220 | 16755327 | 16755220 | ID=MsG0380012455.01.T01:cds;Parent=MsG0380012455.01.T01 |
| Chr3 | CDS | 16754864 | 16755122 | 16754864 | ID=MsG0380012455.01.T01:cds;Parent=MsG0380012455.01.T01 |
| Chr3 | CDS | 16754617 | 16754780 | 16754617 | ID=MsG0380012455.01.T01:cds;Parent=MsG0380012455.01.T01 |
| Chr3 | CDS | 16753905 | 16754228 | 16753905 | ID=MsG0380012455.01.T01:cds;Parent=MsG0380012455.01.T01 |
| Chr3 | three_prime_UTR | 16753763 | 16753904 | 16753763 | ID=MsG0380012455.01.T01:three_prime_utr;Parent=MsG0380012455.01.T01 |
| Gene Sequence |
| Protein sequence |
