AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380013504.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380013504.01.T01 MTR_3g449880 95.161 124 6 0 3 126 96 219 5.37e-74 219
MsG0380013504.01.T01 MTR_3g449880 93.805 113 7 0 1 113 116 228 2.78e-73 218
MsG0380013504.01.T01 MTR_5g090340 64.754 122 43 0 3 124 167 288 2.90e-54 171
MsG0380013504.01.T01 MTR_5g090340 64.754 122 43 0 3 124 164 285 2.92e-54 171
MsG0380013504.01.T01 MTR_8g099060 43.750 128 68 1 3 126 133 260 3.64e-33 117
MsG0380013504.01.T01 MTR_8g028450 40.000 130 66 1 3 120 137 266 2.10e-29 107
MsG0380013504.01.T01 MTR_1g099500 38.596 114 70 0 3 116 126 239 7.88e-22 87.4
MsG0380013504.01.T01 MTR_4g014700 34.821 112 73 0 1 112 80 191 8.74e-19 78.6
MsG0380013504.01.T01 MTR_5g090440 61.818 55 17 1 74 124 9 63 2.70e-16 68.2
MsG0380013504.01.T01 MTR_6g012460 32.456 114 77 0 3 116 72 185 7.40e-14 65.1
MsG0380013504.01.T01 MTR_1g109630 32.381 105 67 1 26 126 102 206 1.59e-11 59.3
MsG0380013504.01.T01 MTR_1g107445 34.951 103 67 0 14 116 88 190 2.36e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380013504.01.T01 AT3G10260 51.587 126 57 1 3 124 120 245 1.68e-44 145
MsG0380013504.01.T01 AT3G10260 51.587 126 57 1 3 124 120 245 1.68e-44 145
MsG0380013504.01.T01 AT3G10260 51.181 127 58 1 3 125 140 266 2.37e-44 145
MsG0380013504.01.T01 AT2G46170 42.241 116 67 0 1 116 125 240 3.39e-29 106
MsG0380013504.01.T01 AT1G64090 41.228 114 67 0 3 116 123 236 9.26e-29 105
MsG0380013504.01.T01 AT1G64090 41.228 114 67 0 3 116 139 252 1.46e-28 105
MsG0380013504.01.T01 AT3G61560 39.474 114 69 0 3 116 127 240 2.40e-27 101
MsG0380013504.01.T01 AT3G61560 39.474 114 69 0 3 116 127 240 2.40e-27 101
MsG0380013504.01.T01 AT4G11220 35.115 131 80 2 1 126 141 271 9.73e-25 95.5
MsG0380013504.01.T01 AT4G23630 38.168 131 76 2 1 126 145 275 1.15e-24 95.1
MsG0380013504.01.T01 AT4G23630 38.168 131 76 2 1 126 145 275 1.15e-24 95.1
MsG0380013504.01.T01 AT5G41600 37.607 117 72 1 1 117 126 241 9.11e-24 92.4
MsG0380013504.01.T01 AT4G01230 34.783 115 75 0 2 116 123 237 1.32e-23 91.7
MsG0380013504.01.T01 AT4G01230 34.783 115 75 0 2 116 125 239 1.50e-23 91.7
MsG0380013504.01.T01 AT3G18260 35.833 120 73 1 9 124 104 223 1.78e-19 80.5
MsG0380013504.01.T01 AT2G15280 32.479 117 79 0 1 117 71 187 4.11e-17 73.9
MsG0380013504.01.T01 AT3G61560 40.278 72 43 0 3 74 127 198 1.26e-14 67.4
MsG0380013504.01.T01 AT3G10915 26.957 115 84 0 3 117 67 181 1.67e-12 61.6
MsG0380013504.01.T01 AT3G10915 26.957 115 84 0 3 117 68 182 1.73e-12 61.6
MsG0380013504.01.T01 AT3G10915 26.957 115 84 0 3 117 125 239 2.41e-12 62.0
MsG0380013504.01.T01 AT3G10915 26.957 115 84 0 3 117 100 214 2.68e-12 61.6
MsG0380013504.01.T01 AT3G19460 30.252 119 83 0 1 119 79 197 9.96e-12 59.7
MsG0380013504.01.T01 AT3G19460 30.252 119 83 0 1 119 79 197 9.96e-12 59.7
MsG0380013504.01.T01 AT3G19460 30.252 119 83 0 1 119 79 197 9.96e-12 59.7

Find 51 sgRNAs with CRISPR-Local

Find 315 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTATCCTTATGTAAATTAT+TGG 0.151012 3:-39632441 MsG0380013504.01.T01:three_prime_UTR
TAACTGGTGCAACAATTATA+TGG 0.199383 3:-39635358 MsG0380013504.01.T01:five_prime_UTR
AACTTTGTGCTCAAGGTCTT+TGG 0.269918 3:-39632541 MsG0380013504.01.T01:CDS
GCCTGCTTGCTCAATTTCTA+TGG 0.286324 3:-39635274 MsG0380013504.01.T01:five_prime_UTR
ATGTTCACAAATAACTCTTC+TGG 0.294981 3:+39635084 None:intergenic
GGAAGTACAGAGAATGAAAA+TGG 0.306536 3:+39637404 None:intergenic
ATGCTTCTAGCATGTTTAAC+AGG 0.343523 3:-39635247 MsG0380013504.01.T01:intron
GTGAACATTGCAACTGTAAT+CGG 0.350430 3:-39635069 MsG0380013504.01.T01:CDS
CAACCTTGTCGACACATTAT+CGG 0.356122 3:-39635656 MsG0380013504.01.T01:five_prime_UTR
TCCAGGTTGTCGTAAGTTTG+TGG 0.393138 3:-39633475 MsG0380013504.01.T01:intron
AACTGGTGCAACAATTATAT+GGG 0.403050 3:-39635357 MsG0380013504.01.T01:five_prime_UTR
CTCTCTCTCTGCTTAGTCTC+TGG 0.405745 3:-39637360 MsG0380013504.01.T01:intron
CCAGGTTGTCGTAAGTTTGT+GGG 0.407558 3:-39633474 MsG0380013504.01.T01:intron
TAAATTATTGGATTGGTTGA+AGG 0.413047 3:-39632429 MsG0380013504.01.T01:three_prime_UTR
TGTGGGCTGGTTCAGTGATC+GGG 0.419844 3:-39633457 MsG0380013504.01.T01:CDS
TGATTTGTCTTCCTCAAAGA+AGG 0.421270 3:+39635616 None:intergenic
TGTTCACAAATAACTCTTCT+GGG 0.437588 3:+39635085 None:intergenic
TTGTGGGCTGGTTCAGTGAT+CGG 0.439695 3:-39633458 MsG0380013504.01.T01:CDS
TTATATGGGTGCTATTTGAA+TGG 0.444221 3:-39635343 MsG0380013504.01.T01:five_prime_UTR
CCTTATGTAAATTATTGGAT+TGG 0.445715 3:-39632436 MsG0380013504.01.T01:three_prime_UTR
CTTCAAGATGTTTCTTGTGA+AGG 0.447481 3:-39635018 MsG0380013504.01.T01:CDS
TACAAGATCTCTTCTATGAA+TGG 0.461169 3:-39632385 MsG0380013504.01.T01:three_prime_UTR
TCATACCTTTCATAGAGAAC+TGG 0.464929 3:+39632577 None:intergenic
CCAATCCAATAATTTACATA+AGG 0.471474 3:+39632436 None:intergenic
AAATTATTGGATTGGTTGAA+GGG 0.472743 3:-39632428 MsG0380013504.01.T01:three_prime_UTR
AACTATAGAAAGCTGGATGC+TGG 0.477192 3:-39632505 MsG0380013504.01.T01:CDS
TCCGAGATCAACAGACTGTT+CGG 0.480198 3:-39635581 MsG0380013504.01.T01:five_prime_UTR
CTGGTTCAGTGATCGGGAGT+TGG 0.488082 3:-39633451 MsG0380013504.01.T01:CDS
GCAAAATAACTATAGAAAGC+TGG 0.488536 3:-39632512 MsG0380013504.01.T01:CDS
AGAGAGAGAGTGAAACAGAA+GGG 0.499528 3:+39637383 None:intergenic
GAGAGAGAGAGTGAAACAGA+AGG 0.503896 3:+39637382 None:intergenic
TTGGTTGAAGGGAATAAGTA+GGG 0.505901 3:-39632417 MsG0380013504.01.T01:three_prime_UTR
TCCGAACAGTCTGTTGATCT+CGG 0.515369 3:+39635580 None:intergenic
GTTGTCGTAAGTTTGTGGGC+TGG 0.521608 3:-39633470 MsG0380013504.01.T01:CDS
ACCATAGAAATTGAGCAAGC+AGG 0.524128 3:+39635273 None:intergenic
CACTTCCAGTTCTCTATGAA+AGG 0.525840 3:-39632582 MsG0380013504.01.T01:CDS
CCTCCTAAAAGATGGTGTAC+AGG 0.528013 3:+39635548 None:intergenic
ATTGGTTGAAGGGAATAAGT+AGG 0.538389 3:-39632418 MsG0380013504.01.T01:three_prime_UTR
TGCAACTGTAATCGGAAATG+AGG 0.543462 3:-39635061 MsG0380013504.01.T01:CDS
AGTTGACAACTTTGTGCTCA+AGG 0.544627 3:-39632548 MsG0380013504.01.T01:CDS
AGTTCTCTATGAAAGGTATG+AGG 0.559341 3:-39632575 MsG0380013504.01.T01:CDS
TGTCGACAAGGTTGTGAAGG+AGG 0.569674 3:+39635665 None:intergenic
CTGGATGCTGGTGTGCTCAA+AGG 0.572299 3:-39632493 MsG0380013504.01.T01:CDS
ATGTGTCGACAAGGTTGTGA+AGG 0.609913 3:+39635662 None:intergenic
ATCGGAAATGAGGTTAACCG+TGG 0.634795 3:-39635051 MsG0380013504.01.T01:CDS
GCAACACGAGATACTTGAGA+TGG 0.643340 3:+39635111 None:intergenic
TGGTTGAAGGGAATAAGTAG+GGG 0.650194 3:-39632416 MsG0380013504.01.T01:three_prime_UTR
CTTGAAGAAAACTCAACCCA+CGG 0.654236 3:+39635034 None:intergenic
TCGGAAATGAGGTTAACCGT+GGG 0.683014 3:-39635050 MsG0380013504.01.T01:CDS
GGTTGAAGGGAATAAGTAGG+GGG 0.683484 3:-39632415 MsG0380013504.01.T01:three_prime_UTR
TGTCCGATAATGTGTCGACA+AGG 0.693508 3:+39635653 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTCTTTTTATTTTATCTTT+TGG - Chr3:39634213-39634232 MsG0380013504.01.T01:intron 10.0%
!!! TTTTTTTTTTAAGATTTCTA+TGG - Chr3:39632443-39632462 MsG0380013504.01.T01:three_prime_UTR 10.0%
!! TTTATCCTTATGTAAATTAT+TGG - Chr3:39637216-39637235 MsG0380013504.01.T01:intron 15.0%
!!! ATTTTCCTTATATTTTGAAA+CGG - Chr3:39632590-39632609 MsG0380013504.01.T01:CDS 15.0%
!!! GTAGAAATAAATATTTTCTA+AGG + Chr3:39636093-39636112 None:intergenic 15.0%
!!! TTTCACTTTTAATTACAAAA+CGG + Chr3:39636740-39636759 None:intergenic 15.0%
!!! TTTTTTTTTATGTATGATCA+TGG - Chr3:39632640-39632659 MsG0380013504.01.T01:intron 15.0%
!! AAAGAATATATCCAAATACA+TGG + Chr3:39632703-39632722 None:intergenic 20.0%
!! AATGCAAGTTAAAATTAATC+AGG + Chr3:39633349-39633368 None:intergenic 20.0%
!! AATTACTTGTGCAAATATTT+GGG + Chr3:39636326-39636345 None:intergenic 20.0%
!! ATAAAAAATATGTATGGTCT+GGG + Chr3:39633004-39633023 None:intergenic 20.0%
!! ATTTACTAAGGGATTTAATT+TGG - Chr3:39635193-39635212 MsG0380013504.01.T01:intron 20.0%
!! CAAATTTATCAAGTTTATCA+GGG + Chr3:39633704-39633723 None:intergenic 20.0%
!! CAATGCATAAAAAATATGTA+TGG + Chr3:39633010-39633029 None:intergenic 20.0%
!! TAATTACTTGTGCAAATATT+TGG + Chr3:39636327-39636346 None:intergenic 20.0%
!! TATCTATTTATCCATGTATT+TGG - Chr3:39632689-39632708 MsG0380013504.01.T01:intron 20.0%
!! TCAAATTTATCAAGTTTATC+AGG + Chr3:39633705-39633724 None:intergenic 20.0%
!! TTCTAAATCACACATATAAT+TGG - Chr3:39635587-39635606 MsG0380013504.01.T01:five_prime_UTR 20.0%
!! TTCTTAAAAAGACATGATTT+CGG - Chr3:39636376-39636395 MsG0380013504.01.T01:intron 20.0%
!! TTGTAATTAAAAGTGAAAAC+TGG - Chr3:39636742-39636761 MsG0380013504.01.T01:intron 20.0%
!!! AAACTATTTTTCTTCAAATG+TGG - Chr3:39636421-39636440 MsG0380013504.01.T01:intron 20.0%
!!! AATCAAACTTTTTAATGATC+TGG + Chr3:39635553-39635572 None:intergenic 20.0%
!!! ATAAGGAAAATTCACTTTTT+AGG + Chr3:39632581-39632600 None:intergenic 20.0%
!!! CAACTAATCTCTTTTTATAT+GGG + Chr3:39635774-39635793 None:intergenic 20.0%
!!! TATCATATCTTTGTTATTCA+TGG - Chr3:39632358-39632377 MsG0380013504.01.T01:three_prime_UTR 20.0%
!!! TCATCTACAAATATTTTACA+AGG + Chr3:39636678-39636697 None:intergenic 20.0%
!!! TCATTTTAAAGCATAAAAGA+AGG - Chr3:39635096-39635115 MsG0380013504.01.T01:CDS 20.0%
!!! TGGGTTTAATTTATTTCTTT+GGG - Chr3:39632413-39632432 MsG0380013504.01.T01:three_prime_UTR 20.0%
!!! TGTTTGCTTATATTTTGAAA+CGG + Chr3:39632504-39632523 None:intergenic 20.0%
!!! TTAGTGCTATGATTTTTTAA+TGG - Chr3:39633112-39633131 MsG0380013504.01.T01:intron 20.0%
!!! TTCTCTTGTTTTAATTTATG+TGG - Chr3:39634462-39634481 MsG0380013504.01.T01:intron 20.0%
!!! TTCTTTTATGCTTTAAAATG+AGG + Chr3:39635097-39635116 None:intergenic 20.0%
!!! TTGGGTTTAATTTATTTCTT+TGG - Chr3:39632412-39632431 MsG0380013504.01.T01:three_prime_UTR 20.0%
!!! TTTACTAAGGGATTTAATTT+GGG - Chr3:39635194-39635213 MsG0380013504.01.T01:intron 20.0%
!!! TTTTTTGCCTTTTGTTTTTT+TGG - Chr3:39632941-39632960 MsG0380013504.01.T01:intron 20.0%
! AATTGATTAAAAAGCAAGCA+CGG + Chr3:39634774-39634793 None:intergenic 25.0%
! ACATGTTATTGATATTGTCA+TGG - Chr3:39634836-39634855 MsG0380013504.01.T01:intron 25.0%
! AGATGAAATACTATGAAAAC+AGG - Chr3:39636692-39636711 MsG0380013504.01.T01:intron 25.0%
! ATTACTTGTGCAAATATTTG+GGG + Chr3:39636325-39636344 None:intergenic 25.0%
! ATTTGCACAAGTAATTAAGA+GGG - Chr3:39636330-39636349 MsG0380013504.01.T01:intron 25.0%
! CATAAAAAATATGTATGGTC+TGG + Chr3:39633005-39633024 None:intergenic 25.0%
! CATTCATTTAATGATGTATG+TGG + Chr3:39632556-39632575 None:intergenic 25.0%
! CCAATCCAATAATTTACATA+AGG + Chr3:39637224-39637243 None:intergenic 25.0%
! CCATATAAAAAGAGATTAGT+TGG - Chr3:39635772-39635791 MsG0380013504.01.T01:intron 25.0%
! CCTTATGTAAATTATTGGAT+TGG - Chr3:39637221-39637240 MsG0380013504.01.T01:intron 25.0%
! GGATATATTCTTTATTGTGT+TGG - Chr3:39632710-39632729 MsG0380013504.01.T01:intron 25.0%
! GTTGAAAACTTCAAAAGAAA+AGG + Chr3:39634797-39634816 None:intergenic 25.0%
! TAAAAAATATGTATGGTCTG+GGG + Chr3:39633003-39633022 None:intergenic 25.0%
! TAAGCAAACTAAATGAACAA+AGG + Chr3:39632392-39632411 None:intergenic 25.0%
! TAGAATGTTGAAAAGAATGT+CGG - Chr3:39635704-39635723 MsG0380013504.01.T01:five_prime_UTR 25.0%
! TAGCTGAAGCATAAAAATAT+GGG + Chr3:39636798-39636817 None:intergenic 25.0%
! TATTTGCACAAGTAATTAAG+AGG - Chr3:39636329-39636348 MsG0380013504.01.T01:intron 25.0%
! TCTAAATTATGAACAAATGC+TGG - Chr3:39636976-39636995 MsG0380013504.01.T01:intron 25.0%
! TGCTATAATATTAAGTGTCA+AGG - Chr3:39635928-39635947 MsG0380013504.01.T01:intron 25.0%
! TTCAACATTCTATCTGTATT+GGG + Chr3:39635696-39635715 None:intergenic 25.0%
! TTCAATGACTATACATTGAT+TGG - Chr3:39637405-39637424 MsG0380013504.01.T01:five_prime_UTR 25.0%
! TTGACACTTAATATTATAGC+AGG + Chr3:39635929-39635948 None:intergenic 25.0%
! TTTCAACATTCTATCTGTAT+TGG + Chr3:39635697-39635716 None:intergenic 25.0%
!! AATCTCTTTTTATATGGGAT+CGG + Chr3:39635769-39635788 None:intergenic 25.0%
!! CCAACTAATCTCTTTTTATA+TGG + Chr3:39635775-39635794 None:intergenic 25.0%
!! CTATAGTTCAACATATTTTC+AGG + Chr3:39636840-39636859 None:intergenic 25.0%
!! GTCAAAAATGATATGTTTTG+TGG - Chr3:39635966-39635985 MsG0380013504.01.T01:intron 25.0%
!! TATAATTGACTTATCCTCTT+GGG - Chr3:39633281-39633300 MsG0380013504.01.T01:intron 25.0%
!!! AAATTATTGGATTGGTTGAA+GGG - Chr3:39637229-39637248 MsG0380013504.01.T01:intron 25.0%
!!! ATGTCTTTTTAAGAAATGTG+GGG + Chr3:39636371-39636390 None:intergenic 25.0%
!!! ATTTCTGCTAGTTTTTTAAC+TGG - Chr3:39634283-39634302 MsG0380013504.01.T01:intron 25.0%
!!! ATTTTAACTTGCATTTGATC+TGG - Chr3:39633354-39633373 MsG0380013504.01.T01:intron 25.0%
!!! CATGTCTTTTTAAGAAATGT+GGG + Chr3:39636372-39636391 None:intergenic 25.0%
!!! CTCCTATTTTTTGTACTTTT+CGG - Chr3:39633388-39633407 MsG0380013504.01.T01:intron 25.0%
!!! GTTCATTTAGTTTGCTTATT+GGG - Chr3:39632394-39632413 MsG0380013504.01.T01:three_prime_UTR 25.0%
!!! TAAATTATTGGATTGGTTGA+AGG - Chr3:39637228-39637247 MsG0380013504.01.T01:intron 25.0%
!!! TCATGTCTTTTTAAGAAATG+TGG + Chr3:39636373-39636392 None:intergenic 25.0%
!!! TGTTCATTTAGTTTGCTTAT+TGG - Chr3:39632393-39632412 MsG0380013504.01.T01:three_prime_UTR 25.0%
!!! TTAATGTTTTATGGTTAGCT+AGG - Chr3:39633307-39633326 MsG0380013504.01.T01:intron 25.0%
!!! TTACTAAGGGATTTAATTTG+GGG - Chr3:39635195-39635214 MsG0380013504.01.T01:intron 25.0%
!!! TTCTTTATTGTGTTGGTTTT+TGG - Chr3:39632717-39632736 MsG0380013504.01.T01:intron 25.0%
AAATCCCTTAGTAAATAACC+TGG + Chr3:39635189-39635208 None:intergenic 30.0%
AACTGGTGCAACAATTATAT+GGG - Chr3:39634300-39634319 MsG0380013504.01.T01:intron 30.0%
AATTGACTAAGTGTGTGTTT+GGG - Chr3:39632762-39632781 MsG0380013504.01.T01:intron 30.0%
ACAATGCACATGTTTGATAA+AGG + Chr3:39634748-39634767 None:intergenic 30.0%
ACAGCGTCATTTCAATTATA+TGG + Chr3:39633631-39633650 None:intergenic 30.0%
ACTAACAAAGTCTACATTCA+GGG + Chr3:39635297-39635316 None:intergenic 30.0%
AGGAAAAGCAAAAAGGAAAA+AGG + Chr3:39632471-39632490 None:intergenic 30.0%
AGTGTAAAAAACCTTTACAC+CGG + Chr3:39635512-39635531 None:intergenic 30.0%
ATAATACTAGTGCTAGGTAT+GGG + Chr3:39636501-39636520 None:intergenic 30.0%
ATCATTTATGAGAACACAAG+AGG + Chr3:39633855-39633874 None:intergenic 30.0%
ATGTTCACAAATAACTCTTC+TGG + Chr3:39634576-39634595 None:intergenic 30.0%
CAAAAAATCATCCTTCTTTG+AGG - Chr3:39634030-39634049 MsG0380013504.01.T01:intron 30.0%
CCTTCAATTGATATCACAAA+AGG + Chr3:39633073-39633092 None:intergenic 30.0%
CTACCATATCAACTAAGAAA+AGG + Chr3:39634877-39634896 None:intergenic 30.0%
CTAGCTGAAGCATAAAAATA+TGG + Chr3:39636799-39636818 None:intergenic 30.0%
GAACACCAATTAATTCTAGT+AGG + Chr3:39633773-39633792 None:intergenic 30.0%
GATGTATGTGGTTCATAATA+TGG + Chr3:39632544-39632563 None:intergenic 30.0%
GCAAAATAACTATAGAAAGC+TGG - Chr3:39637145-39637164 MsG0380013504.01.T01:intron 30.0%
TAAAACATTAATAGCCCAAG+AGG + Chr3:39633298-39633317 None:intergenic 30.0%
TAAAATGAGGAAAAGTGACA+AGG + Chr3:39635084-39635103 None:intergenic 30.0%
TAACTGGTGCAACAATTATA+TGG - Chr3:39634299-39634318 MsG0380013504.01.T01:intron 30.0%
TAACTTCTATATCGCAAAGA+TGG + Chr3:39635006-39635025 None:intergenic 30.0%
TACAAGATCTCTTCTATGAA+TGG - Chr3:39637272-39637291 MsG0380013504.01.T01:intron 30.0%
TATAATACTAGTGCTAGGTA+TGG + Chr3:39636502-39636521 None:intergenic 30.0%
TCAAAAGATGAAAAGAAAGC+CGG + Chr3:39636266-39636285 None:intergenic 30.0%
TCTATATCACAATTGAAGCA+AGG + Chr3:39633420-39633439 None:intergenic 30.0%
TGACAAGGATATTGAAAGAT+GGG + Chr3:39635069-39635088 None:intergenic 30.0%
TGTGACCTACTAGAATTAAT+TGG - Chr3:39633765-39633784 MsG0380013504.01.T01:intron 30.0%
TGTTCACAAATAACTCTTCT+GGG + Chr3:39634575-39634594 None:intergenic 30.0%
TGTTTGATAAAGGTTAACTC+TGG + Chr3:39634738-39634757 None:intergenic 30.0%
TTAAAGCATAAAAGAAGGCA+TGG - Chr3:39635101-39635120 MsG0380013504.01.T01:CDS 30.0%
TTATCAGAAAGAACTAAACC+AGG + Chr3:39636929-39636948 None:intergenic 30.0%
TTCATAACATCATACTGCAT+AGG - Chr3:39634953-39634972 MsG0380013504.01.T01:intron 30.0%
TTGCAATTTATCTGCATTCA+GGG + Chr3:39635268-39635287 None:intergenic 30.0%
TTGCATATTATCTGCATTCA+GGG - Chr3:39635418-39635437 MsG0380013504.01.T01:intron 30.0%
TTTGCAATTTATCTGCATTC+AGG + Chr3:39635269-39635288 None:intergenic 30.0%
TTTGCATATTATCTGCATTC+AGG - Chr3:39635417-39635436 MsG0380013504.01.T01:intron 30.0%
! ATATGCTCTAGTTCATGAAA+TGG - Chr3:39636519-39636538 MsG0380013504.01.T01:intron 30.0%
! CATTAGAAAGAAAGTACGTT+TGG - Chr3:39632857-39632876 MsG0380013504.01.T01:intron 30.0%
! CCTTTTGTGATATCAATTGA+AGG - Chr3:39633070-39633089 MsG0380013504.01.T01:intron 30.0%
! CGAAAAGTACAAAAAATAGG+AGG + Chr3:39633390-39633409 None:intergenic 30.0%
! CTATAATTGACTTATCCTCT+TGG - Chr3:39633280-39633299 MsG0380013504.01.T01:intron 30.0%
! CTTGGGCTATTAATGTTTTA+TGG - Chr3:39633298-39633317 MsG0380013504.01.T01:intron 30.0%
! GAAACAAATGTTTTGTCGAA+AGG - Chr3:39637035-39637054 MsG0380013504.01.T01:intron 30.0%
! GACCGAAAAGTACAAAAAAT+AGG + Chr3:39633393-39633412 None:intergenic 30.0%
! GCTTTCTTTTCATCTTTTGA+TGG - Chr3:39636266-39636285 MsG0380013504.01.T01:intron 30.0%
! TAGAATTAATTGGTGTTCGA+TGG - Chr3:39633775-39633794 MsG0380013504.01.T01:intron 30.0%
! TCAGGAGAAAAGTTTTCATA+GGG + Chr3:39636822-39636841 None:intergenic 30.0%
! TGTTAAACGTTTTACACTGA+CGG - Chr3:39635627-39635646 MsG0380013504.01.T01:five_prime_UTR 30.0%
! TTCAGGAGAAAAGTTTTCAT+AGG + Chr3:39636823-39636842 None:intergenic 30.0%
! TTCTCTACTATGTTTTGTCT+TGG - Chr3:39634354-39634373 MsG0380013504.01.T01:intron 30.0%
! TTTTCTGCTGTGATTTTATC+AGG + Chr3:39633972-39633991 None:intergenic 30.0%
!! AGCTTTTCTTTTTTTCACGT+TGG + Chr3:39632826-39632845 None:intergenic 30.0%
!! CTTTTCTTAGTTGATATGGT+AGG - Chr3:39634875-39634894 MsG0380013504.01.T01:intron 30.0%
!! GCTTTTCTTTTTTTCACGTT+GGG + Chr3:39632825-39632844 None:intergenic 30.0%
!! TCTGAAATACTTTTGCAAGT+GGG - Chr3:39636447-39636466 MsG0380013504.01.T01:intron 30.0%
!! TGACCTTTTCTTAGTTGATA+TGG - Chr3:39634871-39634890 MsG0380013504.01.T01:intron 30.0%
!! TGTCTTTTTAAGAAATGTGG+GGG + Chr3:39636370-39636389 None:intergenic 30.0%
!! TTATATGGGTGCTATTTGAA+TGG - Chr3:39634314-39634333 MsG0380013504.01.T01:intron 30.0%
!!! CTCAAAGAAGGATGATTTTT+TGG + Chr3:39634032-39634051 None:intergenic 30.0%
!!! TCCTTATATTTTGAAACGGA+CGG - Chr3:39632594-39632613 MsG0380013504.01.T01:CDS 30.0%
!!! TTCTGAAATACTTTTGCAAG+TGG - Chr3:39636446-39636465 MsG0380013504.01.T01:intron 30.0%
!!! TTTGCCTTTTGTTTTTTTGG+TGG - Chr3:39632944-39632963 MsG0380013504.01.T01:intron 30.0%
AAAAACTGGCATAAGAAAGC+TGG + Chr3:39636645-39636664 None:intergenic 35.0%
AAGGACACAGATTGAAAAAC+TGG + Chr3:39636659-39636678 None:intergenic 35.0%
ACTAACGAAGTCTACATTCA+GGG + Chr3:39635361-39635380 None:intergenic 35.0%
ATAGTAAGATGCAGAGATGA+AGG - Chr3:39636856-39636875 MsG0380013504.01.T01:intron 35.0%
ATATGGGTCTCTTTACTTTG+AGG + Chr3:39636782-39636801 None:intergenic 35.0%
ATATTGAAAGATGGGATAGC+TGG + Chr3:39635061-39635080 None:intergenic 35.0%
ATCACAATTGAAGCAAGGAA+TGG + Chr3:39633415-39633434 None:intergenic 35.0%
ATGCTTCTAGCATGTTTAAC+AGG - Chr3:39634410-39634429 MsG0380013504.01.T01:intron 35.0%
ATTGACTAAGTGTGTGTTTG+GGG - Chr3:39632763-39632782 MsG0380013504.01.T01:intron 35.0%
ATTGGTTGAAGGGAATAAGT+AGG - Chr3:39637239-39637258 MsG0380013504.01.T01:intron 35.0%
CAATTGACTAAGTGTGTGTT+TGG - Chr3:39632761-39632780 MsG0380013504.01.T01:intron 35.0%
CAGTAACAGGAAAAGCAAAA+AGG + Chr3:39632478-39632497 None:intergenic 35.0%
CCATGAATTATATACATCGC+CGG - Chr3:39635490-39635509 MsG0380013504.01.T01:intron 35.0%
CGGCGATGTATATAATTCAT+GGG + Chr3:39635492-39635511 None:intergenic 35.0%
CTTCAAGATGTTTCTTGTGA+AGG - Chr3:39634639-39634658 MsG0380013504.01.T01:intron 35.0%
GAAGTTACTTAAGAGTCGAT+TGG - Chr3:39635019-39635038 MsG0380013504.01.T01:CDS 35.0%
GACTAACAAAGTCTACATTC+AGG + Chr3:39635298-39635317 None:intergenic 35.0%
GAGCATATAATACTAGTGCT+AGG + Chr3:39636507-39636526 None:intergenic 35.0%
GGATGTCAGCAGAATAAATA+TGG + Chr3:39634985-39635004 None:intergenic 35.0%
GGCGATGTATATAATTCATG+GGG + Chr3:39635491-39635510 None:intergenic 35.0%
GGTTAACTCTGGATGATAAA+TGG + Chr3:39634727-39634746 None:intergenic 35.0%
GTGAACATTGCAACTGTAAT+CGG - Chr3:39634588-39634607 MsG0380013504.01.T01:intron 35.0%
GTGACAAGGATATTGAAAGA+TGG + Chr3:39635070-39635089 None:intergenic 35.0%
TAATACTAGTGCTAGGTATG+GGG + Chr3:39636500-39636519 None:intergenic 35.0%
TCAGGGACTAAATTGACTAA+CGG + Chr3:39635312-39635331 None:intergenic 35.0%
TCATACCTTTCATAGAGAAC+TGG + Chr3:39637083-39637102 None:intergenic 35.0%
TCCGTCCGTTTCAAAATATA+AGG + Chr3:39632598-39632617 None:intergenic 35.0%
TCGTCCAGGTTATTTACTAA+GGG - Chr3:39635182-39635201 MsG0380013504.01.T01:intron 35.0%
TTCGTCCAGGTTATTTACTA+AGG - Chr3:39635181-39635200 MsG0380013504.01.T01:intron 35.0%
TTGGTTGAAGGGAATAAGTA+GGG - Chr3:39637240-39637259 MsG0380013504.01.T01:intron 35.0%
TTTAGGAGGTGGAAAATGTA+CGG - Chr3:39634123-39634142 MsG0380013504.01.T01:intron 35.0%
! AAACCTGTACACCATCTTTT+AGG - Chr3:39634106-39634125 MsG0380013504.01.T01:intron 35.0%
! AGTTCTCTATGAAAGGTATG+AGG - Chr3:39637082-39637101 MsG0380013504.01.T01:intron 35.0%
! ATTTTCCACCTCCTAAAAGA+TGG + Chr3:39634120-39634139 None:intergenic 35.0%
! CACTGGTCTGCAAAAATATA+TGG - Chr3:39636619-39636638 MsG0380013504.01.T01:intron 35.0%
! CATTATTGTGCAAAGTGTCA+AGG - Chr3:39636029-39636048 MsG0380013504.01.T01:intron 35.0%
! GGTGTTCAAACGTAACTTTT+TGG + Chr3:39632801-39632820 None:intergenic 35.0%
! GTTCAAACGTAACTTTTTGG+TGG + Chr3:39632798-39632817 None:intergenic 35.0%
! TGATTTGTCTTCCTCAAAGA+AGG + Chr3:39634044-39634063 None:intergenic 35.0%
!! CTATGTTTTGTCTTGGTTCT+TGG - Chr3:39634361-39634380 MsG0380013504.01.T01:intron 35.0%
!! TTTTTAAGAAATGTGGGGGT+GGG + Chr3:39636366-39636385 None:intergenic 35.0%
!!! TTTCTTTTTTTCACGTTGGG+AGG + Chr3:39632822-39632841 None:intergenic 35.0%
AACTATAGAAAGCTGGATGC+TGG - Chr3:39637152-39637171 MsG0380013504.01.T01:intron 40.0%
AACTTTGTGCTCAAGGTCTT+TGG - Chr3:39637116-39637135 MsG0380013504.01.T01:intron 40.0%
ACCATAGAAATTGAGCAAGC+AGG + Chr3:39634387-39634406 None:intergenic 40.0%
AGAGAGAGAGTGAAACAGAA+GGG + Chr3:39632277-39632296 None:intergenic 40.0%
AGTTGACAACTTTGTGCTCA+AGG - Chr3:39637109-39637128 MsG0380013504.01.T01:intron 40.0%
ATGAAACACCGACACAAACA+CGG - Chr3:39633443-39633462 MsG0380013504.01.T01:CDS 40.0%
ATGAGGTCTGCTAATACACT+AGG - Chr3:39635902-39635921 MsG0380013504.01.T01:intron 40.0%
ATGGGGAAGCAACCTTAATA+GGG + Chr3:39636483-39636502 None:intergenic 40.0%
CAACCTTGTCGACACATTAT+CGG - Chr3:39634001-39634020 MsG0380013504.01.T01:intron 40.0%
CACTTCCAGTTCTCTATGAA+AGG - Chr3:39637075-39637094 MsG0380013504.01.T01:intron 40.0%
CAGGAAGCAGATTGAAAACA+AGG - Chr3:39636711-39636730 MsG0380013504.01.T01:intron 40.0%
CCGGCGATGTATATAATTCA+TGG + Chr3:39635493-39635512 None:intergenic 40.0%
CTTGAAGAAAACTCAACCCA+CGG + Chr3:39634626-39634645 None:intergenic 40.0%
GACTAACGAAGTCTACATTC+AGG + Chr3:39635362-39635381 None:intergenic 40.0%
GCCACCACCAAAAAAACAAA+AGG + Chr3:39632951-39632970 None:intergenic 40.0%
GCCATAACAGTGACAAAATG+AGG + Chr3:39635997-39636016 None:intergenic 40.0%
GGAAGATTTCCTCCCTATTA+AGG - Chr3:39636468-39636487 MsG0380013504.01.T01:intron 40.0%
TATATACATCGCCGGTGTAA+AGG - Chr3:39635498-39635517 MsG0380013504.01.T01:intron 40.0%
TATGGGGAAGCAACCTTAAT+AGG + Chr3:39636484-39636503 None:intergenic 40.0%
TCTGATATCCGTGTTTGTGT+CGG + Chr3:39633454-39633473 None:intergenic 40.0%
TGAAAGTTGAAACACTCTCC+AGG - Chr3:39636165-39636184 MsG0380013504.01.T01:intron 40.0%
TGAGCTTAGCTCAATTGGTA+TGG + Chr3:39633034-39633053 None:intergenic 40.0%
TGATTAAAAAGCAAGCACGG+AGG + Chr3:39634771-39634790 None:intergenic 40.0%
TGCAACTGTAATCGGAAATG+AGG - Chr3:39634596-39634615 MsG0380013504.01.T01:intron 40.0%
TGGTTGAAGGGAATAAGTAG+GGG - Chr3:39637241-39637260 MsG0380013504.01.T01:intron 40.0%
! AAAGATGGGATAGCTGGTTT+CGG + Chr3:39635055-39635074 None:intergenic 40.0%
! AGTCACTTTAGTCCCTGAAT+GGG - Chr3:39635222-39635241 MsG0380013504.01.T01:intron 40.0%
! AGTCACTTTAGTCCCTGAAT+GGG + Chr3:39635241-39635222 None:intergenic 40.0%
! ATGCTTCCAATCTGAAGTGT+CGG - Chr3:39633581-39633600 MsG0380013504.01.T01:intron 40.0%
! GAAGGCATGGTGTATGTAAA+TGG - Chr3:39635114-39635133 MsG0380013504.01.T01:CDS 40.0%
! GAGAAGCTTAGTGCTTTGTT+CGG + Chr3:39632901-39632920 None:intergenic 40.0%
! GCCTCATTTTGTCACTGTTA+TGG - Chr3:39635993-39636012 MsG0380013504.01.T01:intron 40.0%
! TAGTCACTTTAGTCCCTGAA+TGG - Chr3:39635221-39635240 MsG0380013504.01.T01:intron 40.0%
! TAGTCACTTTAGTCCCTGAA+TGG + Chr3:39635240-39635221 None:intergenic 40.0%
! TCTGCACAGTATTTTGTCGT+AGG - Chr3:39634914-39634933 MsG0380013504.01.T01:intron 40.0%
! TTTGAAACGGAGTCAGTAAC+AGG + Chr3:39632491-39632510 None:intergenic 40.0%
!! CTTTTTAAGAAATGTGGGGG+TGG + Chr3:39636367-39636386 None:intergenic 40.0%
!! GGCTTTAAATGCTATAGCTG+CGG - Chr3:39634234-39634253 MsG0380013504.01.T01:intron 40.0%
!! TGGCTTGTTATCTCTTCTTC+TGG - Chr3:39632660-39632679 MsG0380013504.01.T01:intron 40.0%
!!! GCCTTTTGTTTTTTTGGTGG+TGG - Chr3:39632947-39632966 MsG0380013504.01.T01:intron 40.0%
!!! TTTGTTTTTTTGGTGGTGGC+CGG - Chr3:39632951-39632970 MsG0380013504.01.T01:intron 40.0%
ACAAGTCGATAACTCTCAGG+GGG + Chr3:39636550-39636569 None:intergenic 45.0%
ACCACAAGTCGATAACTCTC+AGG + Chr3:39636553-39636572 None:intergenic 45.0%
ACTAACGGAGTCTGCATTCA+GGG + Chr3:39635329-39635348 None:intergenic 45.0%
ATCGGAAATGAGGTTAACCG+TGG - Chr3:39634606-39634625 MsG0380013504.01.T01:intron 45.0%
CACAAGTCGATAACTCTCAG+GGG + Chr3:39636551-39636570 None:intergenic 45.0%
CCACAAGTCGATAACTCTCA+GGG + Chr3:39636552-39636571 None:intergenic 45.0%
CCAGGTTGTCGTAAGTTTGT+GGG - Chr3:39636183-39636202 MsG0380013504.01.T01:intron 45.0%
CCTCCTAAAAGATGGTGTAC+AGG + Chr3:39634112-39634131 None:intergenic 45.0%
CTTACCTAGAGCCCCAAAAA+GGG - Chr3:39636587-39636606 MsG0380013504.01.T01:intron 45.0%
GAGAGAGAGAGTGAAACAGA+AGG + Chr3:39632278-39632297 None:intergenic 45.0%
GCAACACGAGATACTTGAGA+TGG + Chr3:39634549-39634568 None:intergenic 45.0%
GCCTGCTTGCTCAATTTCTA+TGG - Chr3:39634383-39634402 MsG0380013504.01.T01:intron 45.0%
GGTTGAAGGGAATAAGTAGG+GGG - Chr3:39637242-39637261 MsG0380013504.01.T01:intron 45.0%
TATGCAAAACAGTCCCTGCA+TGG + Chr3:39635405-39635424 None:intergenic 45.0%
TCCAGGTTGTCGTAAGTTTG+TGG - Chr3:39636182-39636201 MsG0380013504.01.T01:intron 45.0%
TCCCTGAAATTGACCATGCA+GGG - Chr3:39635389-39635408 MsG0380013504.01.T01:five_prime_UTR 45.0%
TCCCTGCATGGTCAATTTCA+GGG + Chr3:39635393-39635412 None:intergenic 45.0%
TCCGAACAGTCTGTTGATCT+CGG + Chr3:39634080-39634099 None:intergenic 45.0%
TCCGAGATCAACAGACTGTT+CGG - Chr3:39634076-39634095 MsG0380013504.01.T01:intron 45.0%
TCGGAAATGAGGTTAACCGT+GGG - Chr3:39634607-39634626 MsG0380013504.01.T01:intron 45.0%
TCTATGCCTCCACATACGTT+GGG + Chr3:39635852-39635871 None:intergenic 45.0%
TGTCAGATACCGACACATGT+TGG - Chr3:39633547-39633566 MsG0380013504.01.T01:intron 45.0%
! ATGTGTCGACAAGGTTGTGA+AGG + Chr3:39633998-39634017 None:intergenic 45.0%
! CAAAGTGTCAAGGACACTCA+AGG - Chr3:39636039-39636058 MsG0380013504.01.T01:intron 45.0%
! CCTGTACACCATCTTTTAGG+AGG - Chr3:39634109-39634128 MsG0380013504.01.T01:intron 45.0%
! GTCACTTTAGTCCCTGAATG+GGG - Chr3:39635223-39635242 MsG0380013504.01.T01:intron 45.0%
! GTCACTTTAGTCCCTGAATG+GGG + Chr3:39635242-39635223 None:intergenic 45.0%
! TAGCTGCGGATGTTTTGCTA+TGG - Chr3:39634248-39634267 MsG0380013504.01.T01:intron 45.0%
! TGTCCGATAATGTGTCGACA+AGG + Chr3:39634007-39634026 None:intergenic 45.0%
! TGTGCATAAAGTGTTCGTCC+AGG - Chr3:39635168-39635187 MsG0380013504.01.T01:intron 45.0%
!! GTACACCATCTTTTAGGAGG+TGG - Chr3:39634112-39634131 MsG0380013504.01.T01:intron 45.0%
!! GTCTTTGATGATGTGCTCTC+TGG - Chr3:39633922-39633941 MsG0380013504.01.T01:intron 45.0%
!!! TTGTTTTTTTGGTGGTGGCC+GGG - Chr3:39632952-39632971 MsG0380013504.01.T01:intron 45.0%
ACTAAATCTCACGAGCCAGC+TGG - Chr3:39635821-39635840 MsG0380013504.01.T01:intron 50.0%
CCAATTGAGCTAAGCTCACG+AGG - Chr3:39633036-39633055 MsG0380013504.01.T01:intron 50.0%
CCAGGCGTGTCTTTGTGAAT+AGG + Chr3:39636911-39636930 None:intergenic 50.0%
CCCACAAACTTACGACAACC+TGG + Chr3:39636186-39636205 None:intergenic 50.0%
CCTATTCACAAAGACACGCC+TGG - Chr3:39636908-39636927 MsG0380013504.01.T01:intron 50.0%
CCTCGTGAGCTTAGCTCAAT+TGG + Chr3:39633039-39633058 None:intergenic 50.0%
CTAAATCTCACGAGCCAGCT+GGG - Chr3:39635822-39635841 MsG0380013504.01.T01:intron 50.0%
CTCTATGCCTCCACATACGT+TGG + Chr3:39635853-39635872 None:intergenic 50.0%
CTCTCTCTCTGCTTAGTCTC+TGG - Chr3:39632297-39632316 MsG0380013504.01.T01:three_prime_UTR 50.0%
GACGAATCGTTCCCCATTCA+GGG - Chr3:39635449-39635468 MsG0380013504.01.T01:intron 50.0%
GACGAATCGTTCCCCATTCA+GGG + Chr3:39635468-39635449 None:intergenic 50.0%
GACTAACGGAGTCTGCATTC+AGG + Chr3:39635330-39635349 None:intergenic 50.0%
GCTTACCTAGAGCCCCAAAA+AGG - Chr3:39636586-39636605 MsG0380013504.01.T01:intron 50.0%
GGGAAGCAACCTTAATAGGG+AGG + Chr3:39636480-39636499 None:intergenic 50.0%
GTCCCTGAAATTGACCATGC+AGG - Chr3:39635388-39635407 MsG0380013504.01.T01:five_prime_UTR 50.0%
GTCCCTGCATGGTCAATTTC+AGG + Chr3:39635394-39635413 None:intergenic 50.0%
GTCCTCTGTCCAACATGTGT+CGG + Chr3:39633559-39633578 None:intergenic 50.0%
GTTGTCGTAAGTTTGTGGGC+TGG - Chr3:39636187-39636206 MsG0380013504.01.T01:intron 50.0%
TACCGACACATGTTGGACAG+AGG - Chr3:39633554-39633573 MsG0380013504.01.T01:intron 50.0%
TGACGAATCGTTCCCCATTC+AGG - Chr3:39635448-39635467 MsG0380013504.01.T01:intron 50.0%
TGACGAATCGTTCCCCATTC+AGG + Chr3:39635467-39635448 None:intergenic 50.0%
TGTCGACAAGGTTGTGAAGG+AGG + Chr3:39633995-39634014 None:intergenic 50.0%
TGTTGACCTCTGTTCGGATG+AGG - Chr3:39635885-39635904 MsG0380013504.01.T01:intron 50.0%
! TAGTGCTTTGTTCGGACCCA+CGG + Chr3:39632893-39632912 None:intergenic 50.0%
! TGGAGGCATAGAGCTTACTC+CGG - Chr3:39635860-39635879 MsG0380013504.01.T01:intron 50.0%
! TTTTTGCAGACCAGTGCTCG+TGG + Chr3:39636615-39636634 None:intergenic 50.0%
!! CCCTGAGAGTTATCGACTTG+TGG - Chr3:39636549-39636568 MsG0380013504.01.T01:intron 50.0%
!! CTGCGGATGTTTTGCTATGG+AGG - Chr3:39634251-39634270 MsG0380013504.01.T01:intron 50.0%
!! GTAGCACCGACACTTCAGAT+TGG + Chr3:39633590-39633609 None:intergenic 50.0%
!! TCGGTGCTACATGAGCAGAA+AGG - Chr3:39633600-39633619 MsG0380013504.01.T01:intron 50.0%
!! TTGTGGGCTGGTTCAGTGAT+CGG - Chr3:39636199-39636218 MsG0380013504.01.T01:intron 50.0%
!!! TGTTTTTTTGGTGGTGGCCG+GGG - Chr3:39632953-39632972 MsG0380013504.01.T01:intron 50.0%
AAAAAGGGAGCCACGAGCAC+TGG - Chr3:39636602-39636621 MsG0380013504.01.T01:intron 55.0%
AGCAGACCTCATCCGAACAG+AGG + Chr3:39635894-39635913 None:intergenic 55.0%
CCGAACAGAGGTCAACACAC+CGG + Chr3:39635882-39635901 None:intergenic 55.0%
CTGGATGCTGGTGTGCTCAA+AGG - Chr3:39637164-39637183 MsG0380013504.01.T01:intron 55.0%
CTGGTTCAGTGATCGGGAGT+TGG - Chr3:39636206-39636225 MsG0380013504.01.T01:intron 55.0%
! AGTGCTCGTGGCTCCCTTTT+TGG + Chr3:39636603-39636622 None:intergenic 55.0%
! CCGGTGTGTTGACCTCTGTT+CGG - Chr3:39635879-39635898 MsG0380013504.01.T01:intron 55.0%
! GTGCTCGTGGCTCCCTTTTT+GGG + Chr3:39636602-39636621 None:intergenic 55.0%
! TCTGGGGTTCAAACCCGATC+CGG + Chr3:39632987-39633006 None:intergenic 55.0%
! TGCTCGTGGCTCCCTTTTTG+GGG + Chr3:39636601-39636620 None:intergenic 55.0%
!! TGTGGGCTGGTTCAGTGATC+GGG - Chr3:39636200-39636219 MsG0380013504.01.T01:intron 55.0%
CTGGGGTTCAAACCCGATCC+GGG + Chr3:39632986-39633005 None:intergenic 60.0%
TGGGGTTCAAACCCGATCCG+GGG + Chr3:39632985-39633004 None:intergenic 60.0%
! GCTTTGTTCGGACCCACGGT+GGG + Chr3:39632889-39632908 None:intergenic 60.0%
! TGCTTTGTTCGGACCCACGG+TGG + Chr3:39632890-39632909 None:intergenic 60.0%
!!! GGCTCCCTTTTTGGGGCTCT+AGG + Chr3:39636594-39636613 None:intergenic 60.0%
ATACGTTGGGCCAGCCCAGC+TGG + Chr3:39635839-39635858 None:intergenic 65.0%
ATCTCACGAGCCAGCTGGGC+TGG - Chr3:39635826-39635845 MsG0380013504.01.T01:intron 65.0%
CCGATCCGGGGTTCAAACCC+CGG + Chr3:39632973-39632992 None:intergenic 65.0%
CCGGGGTTTGAACCCCGGAT+CGG - Chr3:39632970-39632989 MsG0380013504.01.T01:intron 65.0%
CGGGGTTTGAACCCCGGATC+GGG - Chr3:39632971-39632990 MsG0380013504.01.T01:intron 65.0%
GTTTGGCCCTCTCCCACCGT+GGG - Chr3:39632874-39632893 MsG0380013504.01.T01:intron 65.0%
TTCGGACCCACGGTGGGAGA+GGG + Chr3:39632883-39632902 None:intergenic 65.0%
! GGCTGGCCCAACGTATGTGG+AGG - Chr3:39635843-39635862 MsG0380013504.01.T01:intron 65.0%
!! CTGGGCTGGCCCAACGTATG+TGG - Chr3:39635840-39635859 MsG0380013504.01.T01:intron 65.0%
CGTTTGGCCCTCTCCCACCG+TGG - Chr3:39632873-39632892 MsG0380013504.01.T01:intron 70.0%
GGTGGCCGGGGTTTGAACCC+CGG - Chr3:39632965-39632984 MsG0380013504.01.T01:intron 70.0%
GTTCGGACCCACGGTGGGAG+AGG + Chr3:39632884-39632903 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 39632255 39637424 39632255 ID=MsG0380013504.01;Name=MsG0380013504.01
Chr3 mRNA 39632255 39637424 39632255 ID=MsG0380013504.01.T01;Parent=MsG0380013504.01;Name=MsG0380013504.01.T01;_AED=0.40;_eAED=0.40;_QI=422|1|1|1|0.6|0.66|6|210|126
Chr3 exon 39637361 39637424 39637361 ID=MsG0380013504.01.T01:exon:5500;Parent=MsG0380013504.01.T01
Chr3 exon 39635540 39635727 39635540 ID=MsG0380013504.01.T01:exon:5501;Parent=MsG0380013504.01.T01
Chr3 exon 39635248 39635428 39635248 ID=MsG0380013504.01.T01:exon:5502;Parent=MsG0380013504.01.T01
Chr3 exon 39634996 39635137 39634996 ID=MsG0380013504.01.T01:exon:5503;Parent=MsG0380013504.01.T01
Chr3 exon 39633423 39633492 39633423 ID=MsG0380013504.01.T01:exon:5504;Parent=MsG0380013504.01.T01
Chr3 exon 39632255 39632622 39632255 ID=MsG0380013504.01.T01:exon:5505;Parent=MsG0380013504.01.T01
Chr3 five_prime_UTR 39637361 39637424 39637361 ID=MsG0380013504.01.T01:five_prime_utr;Parent=MsG0380013504.01.T01
Chr3 five_prime_UTR 39635540 39635727 39635540 ID=MsG0380013504.01.T01:five_prime_utr;Parent=MsG0380013504.01.T01
Chr3 five_prime_UTR 39635259 39635428 39635259 ID=MsG0380013504.01.T01:five_prime_utr;Parent=MsG0380013504.01.T01
Chr3 CDS 39635248 39635258 39635248 ID=MsG0380013504.01.T01:cds;Parent=MsG0380013504.01.T01
Chr3 CDS 39634996 39635137 39634996 ID=MsG0380013504.01.T01:cds;Parent=MsG0380013504.01.T01
Chr3 CDS 39633423 39633492 39633423 ID=MsG0380013504.01.T01:cds;Parent=MsG0380013504.01.T01
Chr3 CDS 39632465 39632622 39632465 ID=MsG0380013504.01.T01:cds;Parent=MsG0380013504.01.T01
Chr3 three_prime_UTR 39632255 39632464 39632255 ID=MsG0380013504.01.T01:three_prime_utr;Parent=MsG0380013504.01.T01
Gene Sequence

>MsG0380013504.01.T01

ATGTTTAACAGTACACCATCTCAAGTATCTCGTGTTGCTGTCCCAGAAGAGTTATTTGTGAACATTGCAACTGTAATCGGAAATGAGGTTAACCGTGGGTTGAGTTTTCTTCAAGATGTTTCTTGTGAAGGAAACTTGAAGACATTTCTCATTGTTGTCGTAAGTTTGTGGGCTGGTTCAGTGATCGGGAGTTGGTGCAATTTTTTGACTGTCATCTATATTGGTATTGTTGCTGCACATACACTTCCAGTTCTCTATGAAAGGTATGAGGATGAAGTTGACAACTTTGTGCTCAAGGTCTTTGGTCAGATGCAAAATAACTATAGAAAGCTGGATGCTGGTGTGCTCAAAGGAAAACTCAAAGTAAAGAAGCATAATTAG
Protein sequence

>MsG0380013504.01.T01

MFNSTPSQVSRVAVPEELFVNIATVIGNEVNRGLSFLQDVSCEGNLKTFLIVVVSLWAGSVIGSWCNFLTVIYIGIVAAHTLPVLYERYEDEVDNFVLKVFGQMQNNYRKLDAGVLKGKLKVKKHN*