AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004396.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004396.01.T01 MTR_1g077480 79.427 384 31 2 51 386 1 384 0.0 631
MsG0180004396.01.T01 MTR_6g086625 78.646 384 28 3 51 386 1 378 0.0 614
MsG0180004396.01.T01 MTR_6g086575 76.562 384 35 3 51 386 1 377 0.0 592
MsG0180004396.01.T01 MTR_1g077520 68.504 381 69 2 53 386 4 380 0.0 545
MsG0180004396.01.T01 MTR_1g078400 77.410 363 10 5 386 676 17 379 0.0 533
MsG0180004396.01.T01 MTR_6g069140 66.482 361 73 2 73 386 33 392 2.12e-171 496
MsG0180004396.01.T01 MTR_1g077520 77.083 288 62 1 53 340 4 287 5.47e-168 484
MsG0180004396.01.T01 MTR_7g073640 54.639 388 113 4 48 386 6 379 3.88e-142 421
MsG0180004396.01.T01 MTR_7g073650 59.941 337 87 2 98 386 42 378 5.80e-141 418
MsG0180004396.01.T01 MTR_1g078400 73.026 304 10 5 386 617 17 320 6.01e-140 413
MsG0180004396.01.T01 MTR_3g094160 57.061 347 98 2 97 393 59 404 2.33e-136 407
MsG0180004396.01.T01 MTR_1g078410 70.755 212 11 1 51 262 1 161 6.02e-95 291
MsG0180004396.01.T01 MTR_7g102760 53.600 125 58 0 551 675 265 389 1.00e-36 142
MsG0180004396.01.T01 MTR_7g102760 33.846 195 104 5 373 545 4 195 2.08e-18 88.2
MsG0180004396.01.T01 MTR_2g096530 27.077 325 137 13 107 339 40 356 4.37e-12 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004396.01.T01 AT5G08370 65.179 336 70 1 98 386 31 366 1.86e-158 462
MsG0180004396.01.T01 AT5G08370 65.179 336 70 1 98 386 5 340 3.69e-158 461
MsG0180004396.01.T01 AT4G27650 59.229 363 75 5 386 676 17 378 1.47e-137 408
MsG0180004396.01.T01 AT4G27650 59.229 363 75 5 386 676 17 378 1.47e-137 408
MsG0180004396.01.T01 AT4G27650 59.229 363 75 5 386 676 17 378 1.47e-137 408
MsG0180004396.01.T01 AT5G08380 53.543 381 126 3 53 386 4 380 1.89e-136 407
MsG0180004396.01.T01 AT3G56310 57.692 338 92 2 99 386 65 401 7.89e-134 401
MsG0180004396.01.T01 AT5G08380 62.718 287 103 2 53 339 4 286 2.24e-126 377
MsG0180004396.01.T01 AT3G56310 53.254 338 83 3 99 386 65 377 9.21e-116 353
MsG0180004396.01.T01 AT3G58390 51.823 384 87 8 386 676 17 395 1.42e-114 350

Find 194 sgRNAs with CRISPR-Local

Find 816 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTACTATAGTTTCTGGTTTC+AGG 0.093214 1:+77450538 None:intergenic
GTTCATGAGTTCATCATTTC+TGG 0.116483 1:+77439915 None:intergenic
GTCAATTCAGTTAAGGATTC+TGG 0.172762 1:-77440445 MsG0180004396.01.T01:CDS
TTTAATATGTTAGGGAAATA+TGG 0.190011 1:-77452480 MsG0180004396.01.T01:intron
CTGGCATCTACTATAGTTTC+TGG 0.207589 1:+77450531 None:intergenic
TCTTCAGCTGCTCGTTTATT+AGG 0.209748 1:-77453683 MsG0180004396.01.T01:CDS
GGGTACACATATATTAATTT+AGG 0.227912 1:-77453212 MsG0180004396.01.T01:intron
CAGTGGATTCAGATGATTTA+TGG 0.238632 1:-77446408 MsG0180004396.01.T01:CDS
TTTGCACTTCCAATAATCTT+TGG 0.245428 1:+77453783 None:intergenic
TAGTAGATGCCAGAGATTTA+TGG 0.246262 1:-77450521 MsG0180004396.01.T01:CDS
ACAAAATAGTAGTGGTCTTA+TGG 0.253061 1:-77450611 MsG0180004396.01.T01:CDS
ATGCCAAAACATTTGCTTCT+TGG 0.258381 1:-77452228 MsG0180004396.01.T01:CDS
TCCATCCTCCCAAAGATTAT+TGG 0.258601 1:-77453792 MsG0180004396.01.T01:CDS
CAATCCTGGCTGTTACTATT+AGG 0.258615 1:-77446354 MsG0180004396.01.T01:CDS
CCAACTATTTCCCACACTTT+TGG 0.260055 1:+77451684 None:intergenic
AAGAGTTATTTGTTACAAAA+TGG 0.275729 1:-77453617 MsG0180004396.01.T01:CDS
TTAGCCCATATCCTCCTTAT+TGG 0.278692 1:-77444845 MsG0180004396.01.T01:CDS
TTTGTCTTTCGTAGGATGTC+TGG 0.288841 1:-77445206 MsG0180004396.01.T01:intron
ATATCCTCCTTATTGGTAAA+AGG 0.288893 1:-77444838 MsG0180004396.01.T01:intron
TTATTGGAAGTGCAAATAAT+TGG 0.294426 1:-77453776 MsG0180004396.01.T01:CDS
TGCCAAAACATTTGCTTCTT+GGG 0.296895 1:-77452227 MsG0180004396.01.T01:intron
TTTCCAACTTCGAGCATATC+AGG 0.306089 1:+77451260 None:intergenic
TCAACTGGCCTTAGTGCCTT+AGG 0.329100 1:-77453233 MsG0180004396.01.T01:CDS
TGGTCTTCCAGAGTTTAATA+AGG 0.329973 1:+77451921 None:intergenic
TTTATCATGCTCATGACATT+TGG 0.332786 1:+77442646 None:intergenic
TGAACGTGTTAAACTCAAAT+TGG 0.335052 1:-77446293 MsG0180004396.01.T01:CDS
CACATGAAAGGCTTGAAGTT+GGG 0.350279 1:-77452404 MsG0180004396.01.T01:CDS
TTTAATAAGGCTTCACTCAT+TGG 0.352747 1:+77451934 None:intergenic
TGTCTGGGATTCTTATGCTT+TGG 0.353497 1:-77445190 MsG0180004396.01.T01:CDS
GATTCATCACGTGCTTGTTA+TGG 0.355531 1:-77441140 MsG0180004396.01.T01:CDS
TTTGCACAGCTAGGCGTTCA+TGG 0.362499 1:+77441096 None:intergenic
CAGGAGATATTGAAGATAAC+TGG 0.363695 1:-77451654 MsG0180004396.01.T01:CDS
AGAAGAACAAGGGTGAGAAT+TGG 0.364911 1:-77454857 MsG0180004396.01.T01:CDS
TTGCACTTCCAATAATCTTT+GGG 0.369240 1:+77453784 None:intergenic
TACCCAAGAAGCAAATGTTT+TGG 0.374219 1:+77452225 None:intergenic
CTGGGATTCTTATGCTTTGG+AGG 0.376577 1:-77445187 MsG0180004396.01.T01:CDS
ATGGTATAAGCGTTAGAAAA+AGG 0.383351 1:-77452059 MsG0180004396.01.T01:intron
TGGAATAGCTGGAACCATTT+CGG 0.385561 1:-77453408 MsG0180004396.01.T01:CDS
TAATAGATGAAAACGACAAA+TGG 0.390777 1:-77451430 MsG0180004396.01.T01:CDS
TGCCGAGTATCTATATTATA+AGG 0.391671 1:-77439828 MsG0180004396.01.T01:three_prime_UTR
AAGGTGGATATTTGTGCTCC+TGG 0.396822 1:-77439809 MsG0180004396.01.T01:three_prime_UTR
TACGACAATTGTGAAAATAA+TGG 0.398182 1:-77452078 MsG0180004396.01.T01:CDS
TAACTTGGTCAATTCAGTTA+AGG 0.403397 1:-77440452 MsG0180004396.01.T01:CDS
ATCTCCATGTCTTCAAGATC+GGG 0.406751 1:+77440073 None:intergenic
AGTAGATGCCAGAGATTTAT+GGG 0.407721 1:-77450520 MsG0180004396.01.T01:CDS
TGACGGAAACGTTGAAGCCT+TGG 0.408876 1:+77452454 None:intergenic
AAGCATGGGCCTGCTATTGC+TGG 0.409513 1:-77444535 MsG0180004396.01.T01:CDS
TCAGGACTCCTAGGCAAGTT+GGG 0.409552 1:-77439949 MsG0180004396.01.T01:three_prime_UTR
GAAGAACAAGGGTGAGAATT+GGG 0.412896 1:-77454856 MsG0180004396.01.T01:CDS
TCCAATAATCTTTGGGAGGA+TGG 0.414006 1:+77453791 None:intergenic
CATTGATATCACAACCGAAA+TGG 0.414111 1:+77453394 None:intergenic
GAAAGTTTAATCCGAGATAC+AGG 0.426792 1:-77453372 MsG0180004396.01.T01:intron
TCAAAATTCACATCACTACT+TGG 0.427630 1:-77439762 MsG0180004396.01.T01:three_prime_UTR
AACGTTTCCGTCAGGAATCA+AGG 0.429945 1:-77452444 MsG0180004396.01.T01:CDS
TTGGGGATTTATTCAGATGC+TGG 0.430380 1:-77452386 MsG0180004396.01.T01:CDS
ATATGCTCGAAGTTGGAAAC+GGG 0.439121 1:-77451256 MsG0180004396.01.T01:CDS
GAGGTACTCCAGCAGGCCTC+TGG 0.441982 1:-77445168 MsG0180004396.01.T01:intron
ATTTCATGTCTTAGTGATCC+AGG 0.443770 1:+77452256 None:intergenic
TTGTCTTTCGTAGGATGTCT+GGG 0.444089 1:-77445205 MsG0180004396.01.T01:intron
AACTATTACATATCATTGCT+TGG 0.444678 1:+77439865 None:intergenic
CTCAGGACTCCTAGGCAAGT+TGG 0.449630 1:-77439950 MsG0180004396.01.T01:three_prime_UTR
TGCTTTGGAGGTACTCCAGC+AGG 0.452022 1:-77445175 MsG0180004396.01.T01:CDS
TTGTTTCATGCACCTTAGCT+AGG 0.460088 1:+77451189 None:intergenic
GGAAATAGTTGGAGAACAAC+AGG 0.462081 1:-77451673 MsG0180004396.01.T01:CDS
TTTACCAATAAGGAGGATAT+GGG 0.463278 1:+77444841 None:intergenic
CAACTGGCCTTAGTGCCTTA+GGG 0.463319 1:-77453232 MsG0180004396.01.T01:CDS
GTGGCATTGCTGCAATTCTT+CGG 0.467542 1:-77440105 MsG0180004396.01.T01:CDS
GAGCATGATAAAAGATACTA+AGG 0.469317 1:-77442635 MsG0180004396.01.T01:CDS
AATATCTACTATAGAAAAGA+AGG 0.471027 1:-77453642 MsG0180004396.01.T01:CDS
CATCTCCATGTCTTCAAGAT+CGG 0.471844 1:+77440072 None:intergenic
GCTGATGCAATGGTGTCAAC+TGG 0.474438 1:-77453248 MsG0180004396.01.T01:CDS
ATAGCATACCAGAGGCCTGC+TGG 0.474895 1:+77445160 None:intergenic
AATAGATGAAAACGACAAAT+GGG 0.477810 1:-77451429 MsG0180004396.01.T01:CDS
TCTCACCTCCCATAAATCTC+TGG 0.481924 1:+77450512 None:intergenic
ATGGGAAGATCCGGCAACAT+GGG 0.483081 1:-77451707 MsG0180004396.01.T01:CDS
AGCTCCTGGTGATTCAATCC+TGG 0.483720 1:-77446368 MsG0180004396.01.T01:CDS
ACATGAAAGGCTTGAAGTTG+GGG 0.485593 1:-77452403 MsG0180004396.01.T01:CDS
TTCAATTGATTCGCTATCCA+TGG 0.486169 1:+77454920 None:intergenic
TTGAAGACATGGAGATGTAA+TGG 0.489248 1:-77440066 MsG0180004396.01.T01:exon
GTATGACTGTTACTCGTTCA+CGG 0.494137 1:-77444579 MsG0180004396.01.T01:CDS
TTGAAAGAAACGGTGGATCA+AGG 0.495167 1:-77454902 MsG0180004396.01.T01:CDS
TCTTCTTCTCTATGTGTGAA+TGG 0.495440 1:-77451897 MsG0180004396.01.T01:intron
CTTGGTCAGACACCTCCAAT+GGG 0.496185 1:-77453593 MsG0180004396.01.T01:CDS
TGATGTTTAGATGGAATAGC+TGG 0.498877 1:-77453419 MsG0180004396.01.T01:intron
TGTTGTTACAACCGTCTCTC+AGG 0.498938 1:-77439967 MsG0180004396.01.T01:three_prime_UTR
TTGCACAGCTAGGCGTTCAT+GGG 0.499013 1:+77441097 None:intergenic
GATCCTGATATGCTCGAAGT+TGG 0.500070 1:-77451263 MsG0180004396.01.T01:CDS
GACGGAAACGTTGAAGCCTT+GGG 0.501363 1:+77452455 None:intergenic
GATATGCTCGAAGTTGGAAA+CGG 0.501986 1:-77451257 MsG0180004396.01.T01:CDS
GGATTACGACAAAGAAGGTT+CGG 0.502370 1:-77445596 MsG0180004396.01.T01:CDS
GATGGGAAGATCCGGCAACA+TGG 0.502993 1:-77451708 MsG0180004396.01.T01:CDS
ACTTGTAGTAAACGCATGCC+TGG 0.504097 1:-77452274 MsG0180004396.01.T01:CDS
CTGTAGGCATAGTTTAAAAG+AGG 0.505007 1:-77442680 MsG0180004396.01.T01:CDS
GCATATAATTTGATAGCTCC+TGG 0.505012 1:-77446382 MsG0180004396.01.T01:CDS
ACATAGGGGATGGGAAGATC+CGG 0.505331 1:-77451716 MsG0180004396.01.T01:intron
TAGCATTTGGGCCCTAGCTA+AGG 0.506245 1:-77451201 MsG0180004396.01.T01:intron
GCTTCAATTCCTCGAAAGCA+TGG 0.506427 1:-77444550 MsG0180004396.01.T01:CDS
TTGTAATGGCAGGTGTGGGC+AGG 0.508688 1:-77450648 MsG0180004396.01.T01:intron
CTCTCATAACCAGCAATAGC+AGG 0.508709 1:+77444526 None:intergenic
TCACATGAAAGGCTTGAAGT+TGG 0.509212 1:-77452405 MsG0180004396.01.T01:CDS
AAGGCTTCAACGTTTCCGTC+AGG 0.511489 1:-77452452 MsG0180004396.01.T01:CDS
TGGGGATTTATTCAGATGCT+GGG 0.511774 1:-77452385 MsG0180004396.01.T01:intron
GCTCATTATGTTCACATGAA+AGG 0.515024 1:-77452416 MsG0180004396.01.T01:CDS
AAATAATTGGAGCAATGGCT+AGG 0.516781 1:-77453763 MsG0180004396.01.T01:CDS
TATAATTTCAGCTGATGCAA+TGG 0.516985 1:-77453258 MsG0180004396.01.T01:intron
AACCGTCTCTCAGGACTCCT+AGG 0.518565 1:-77439958 MsG0180004396.01.T01:three_prime_UTR
GACAAATGGGCATCTTACGC+TGG 0.520931 1:-77451416 MsG0180004396.01.T01:CDS
GTTCTTAGAGAAGCAGCTAA+TGG 0.522330 1:-77446328 MsG0180004396.01.T01:CDS
CTTTCTAAAACATAGGGGAT+GGG 0.522563 1:-77451725 MsG0180004396.01.T01:intron
TGGGCATCTTACGCTGGACC+TGG 0.522611 1:-77451410 MsG0180004396.01.T01:CDS
GCTAGATCAGCACTTGCAGC+GGG 0.523110 1:+77444890 None:intergenic
TCACACATAGAGAAGAAGAT+TGG 0.524798 1:+77451901 None:intergenic
AGTGAAGCCTTATTAAACTC+TGG 0.525310 1:-77451928 MsG0180004396.01.T01:CDS
CATTAGAATTCCTTGTCTGT+AGG 0.525343 1:-77442696 MsG0180004396.01.T01:intron
CCAAAAGTGTGGGAAATAGT+TGG 0.526021 1:-77451684 MsG0180004396.01.T01:CDS
TATTTGTTACAAAATGGACT+TGG 0.526903 1:-77453611 MsG0180004396.01.T01:CDS
GGCAACATGGGCCAAAAGTG+TGG 0.527051 1:-77451695 MsG0180004396.01.T01:CDS
AATAAACGAGCAGCTGAAGA+TGG 0.531597 1:+77453686 None:intergenic
AATAAGGCTTCACTCATTGG+TGG 0.532353 1:+77451937 None:intergenic
TCTTCAGGTTCGAATTCTGA+AGG 0.535228 1:-77442510 MsG0180004396.01.T01:intron
TTGGTCAAGCAAGTCGGTGT+TGG 0.535309 1:-77440037 MsG0180004396.01.T01:three_prime_UTR
CTTACGCTGGACCTGGAGGA+TGG 0.542528 1:-77451403 MsG0180004396.01.T01:CDS
TGTTTCATGCACCTTAGCTA+GGG 0.542541 1:+77451190 None:intergenic
ATGTGTACCCTAAGGCACTA+AGG 0.543540 1:+77453225 None:intergenic
AGCGAATCAATTGAAAGAAA+CGG 0.543947 1:-77454912 MsG0180004396.01.T01:CDS
ACTCAGCACCCAACTTGCCT+AGG 0.547054 1:+77439941 None:intergenic
ATAAGGCTTCACTCATTGGT+GGG 0.549666 1:+77451938 None:intergenic
TAATTACCATTCCATCCTCC+AGG 0.554545 1:+77451392 None:intergenic
CACTTCCAATAATCTTTGGG+AGG 0.557419 1:+77453787 None:intergenic
AGATACTAAGGCAGCACAAG+AGG 0.557963 1:-77442623 MsG0180004396.01.T01:intron
ATAGCAGGCCCATGCTTTCG+AGG 0.559839 1:+77444541 None:intergenic
ACTTGGTCAGACACCTCCAA+TGG 0.560343 1:-77453594 MsG0180004396.01.T01:CDS
CCTGGCTGTTACTATTAGGA+AGG 0.561580 1:-77446350 MsG0180004396.01.T01:CDS
GAACATATATACCTGTATCT+CGG 0.563077 1:+77453361 None:intergenic
ATGCAACAGTGACTGCATCC+TGG 0.565477 1:-77450572 MsG0180004396.01.T01:CDS
AATAATTGGAGCAATGGCTA+GGG 0.566015 1:-77453762 MsG0180004396.01.T01:CDS
CCTTCCTAATAGTAACAGCC+AGG 0.570231 1:+77446350 None:intergenic
ACTGCATCCTGGTCAGACAT+AGG 0.570407 1:-77450561 MsG0180004396.01.T01:CDS
TTAGGGAAATATGGTTCCCA+AGG 0.571959 1:-77452471 MsG0180004396.01.T01:intron
TTTCAGGCCTATGTCTGACC+AGG 0.572096 1:+77450554 None:intergenic
TTAAACTATGCCTACAGACA+AGG 0.572553 1:+77442686 None:intergenic
AAATGATGAACTCATGAACC+AGG 0.573809 1:-77439911 MsG0180004396.01.T01:three_prime_UTR
CATGCATGGATGAAAATACA+TGG 0.575010 1:+77440413 None:intergenic
AGTGCAAATAATTGGAGCAA+TGG 0.576672 1:-77453768 MsG0180004396.01.T01:CDS
CTTCAATTCCTCGAAAGCAT+GGG 0.576900 1:-77444549 MsG0180004396.01.T01:CDS
TCTCCCCGATCTTGAAGACA+TGG 0.580261 1:-77440077 MsG0180004396.01.T01:CDS
ATATTGAAGATAACTGGAAG+AGG 0.580538 1:-77451648 MsG0180004396.01.T01:intron
CATAAATCATCTGAATCCAC+TGG 0.580700 1:+77446409 None:intergenic
AGCTAGATCAGCACTTGCAG+CGG 0.581969 1:+77444889 None:intergenic
GCTGGACCTGGAGGATGGAA+TGG 0.582660 1:-77451398 MsG0180004396.01.T01:intron
AGGTGGATATTTGTGCTCCT+GGG 0.583234 1:-77439808 MsG0180004396.01.T01:three_prime_UTR
CACCTTATAATATAGATACT+CGG 0.587666 1:+77439826 None:intergenic
ATTAATATATGTGTACCCTA+AGG 0.594752 1:+77453217 None:intergenic
TTATGGAACAAAACATGTTG+AGG 0.595098 1:-77441123 MsG0180004396.01.T01:CDS
ACAGAACTAGAACAGATAAG+TGG 0.595501 1:-77440124 MsG0180004396.01.T01:intron
AGAACTTAATCGAGACTCCA+AGG 0.598403 1:-77452658 MsG0180004396.01.T01:intron
TGGAGCAATGGCTAGGGTGA+TGG 0.600712 1:-77453756 MsG0180004396.01.T01:CDS
TGAGAAGCGTTTGCACAGCT+AGG 0.600897 1:+77441087 None:intergenic
ATGTCTTCAAGATCGGGGAG+AGG 0.602324 1:+77440079 None:intergenic
TGATACACAGATGGTGCCAG+TGG 0.604532 1:-77446425 MsG0180004396.01.T01:intron
GCAACATGGGCCAAAAGTGT+GGG 0.604665 1:-77451694 MsG0180004396.01.T01:CDS
GAGGGTATAACATACCCCAT+TGG 0.607350 1:+77453578 None:intergenic
TCTAGAGAATGAACATGTCA+AGG 0.615714 1:-77445548 MsG0180004396.01.T01:CDS
GGTATAACATACCCCATTGG+AGG 0.622864 1:+77453581 None:intergenic
CTTAGAGAAGCAGCTAATGG+TGG 0.622942 1:-77446325 MsG0180004396.01.T01:CDS
AATTCAGTTAAGGATTCTGG+AGG 0.623215 1:-77440442 MsG0180004396.01.T01:CDS
TGTATCCTAAAAGAAACGAA+TGG 0.623265 1:+77439731 None:intergenic
TGCCTAGGAGTCCTGAGAGA+CGG 0.624394 1:+77439956 None:intergenic
AAGTAATAACAAAATAGTAG+TGG 0.628250 1:-77450619 MsG0180004396.01.T01:CDS
AAACGAGCAGCTGAAGATGG+TGG 0.628259 1:+77453689 None:intergenic
AAAGAATGATGAGAAGAACA+AGG 0.638739 1:-77454868 MsG0180004396.01.T01:CDS
GCTAGAGCCTTGATTCCTGA+CGG 0.639680 1:+77452437 None:intergenic
TGCAAGTGCTGATCTAGCTG+TGG 0.644335 1:-77444885 MsG0180004396.01.T01:CDS
GCTGTGGTGTTGATGCAAGA+AGG 0.651031 1:-77444869 MsG0180004396.01.T01:CDS
AATGATGAACTCATGAACCA+GGG 0.655612 1:-77439910 MsG0180004396.01.T01:three_prime_UTR
CGAGTATCTATATTATAAGG+TGG 0.655686 1:-77439825 MsG0180004396.01.T01:three_prime_UTR
GCATCTTACGCTGGACCTGG+AGG 0.657439 1:-77451407 MsG0180004396.01.T01:CDS
ATGCTCGAAGTTGGAAACGG+GGG 0.660475 1:-77451254 MsG0180004396.01.T01:CDS
ACAATGTTGGTCAAGCAAGT+CGG 0.667790 1:-77440043 MsG0180004396.01.T01:three_prime_UTR
ACAGCCAGGATTGAATCACC+AGG 0.669165 1:+77446364 None:intergenic
AAGAATGATGAGAAGAACAA+GGG 0.670675 1:-77454867 MsG0180004396.01.T01:CDS
GGTGTGGATTACGACAAAGA+AGG 0.681855 1:-77445601 MsG0180004396.01.T01:CDS
TCTCCATGTCTTCAAGATCG+GGG 0.682261 1:+77440074 None:intergenic
ATGATGAACTCATGAACCAG+GGG 0.684050 1:-77439909 MsG0180004396.01.T01:three_prime_UTR
GGAGATGTAATGGACAATGT+TGG 0.686186 1:-77440056 MsG0180004396.01.T01:exon
ACGTTCTCCAGAGACATGCA+TGG 0.686516 1:+77440399 None:intergenic
TTGCAATATTCACTAGCACA+AGG 0.695421 1:+77453717 None:intergenic
GGAATGCAGATATACCAACC+AGG 0.698003 1:-77440486 MsG0180004396.01.T01:CDS
GAATCAATTGAAAGAAACGG+TGG 0.707472 1:-77454909 MsG0180004396.01.T01:CDS
TATGCTCGAAGTTGGAAACG+GGG 0.712195 1:-77451255 MsG0180004396.01.T01:CDS
ATGAGAACGATATTCCTCTG+TGG 0.723228 1:+77451226 None:intergenic
TGATGAACTCATGAACCAGG+GGG 0.723612 1:-77439908 MsG0180004396.01.T01:three_prime_UTR
TTGGTCAGACACCTCCAATG+GGG 0.742998 1:-77453592 MsG0180004396.01.T01:intron
AGATGCCAGAGATTTATGGG+AGG 0.747364 1:-77450517 MsG0180004396.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG + Chr1:77440555-77440536 None:intergenic 0.0%
!!! TTTATAATTTATTTTTTTTA+AGG - Chr1:77447550-77447569 MsG0180004396.01.T01:intron 0.0%
!! AATTATCATTGATAAATATA+AGG + Chr1:77446327-77446346 None:intergenic 10.0%
!! ACTAATAAATATAAAAAACA+TGG + Chr1:77446007-77446026 None:intergenic 10.0%
!! ATAAATGTCTATAATAAAAT+AGG + Chr1:77449471-77449490 None:intergenic 10.0%
!! ATAATTATAATAGAAAACAA+AGG + Chr1:77446043-77446062 None:intergenic 10.0%
!! ATTAGAATAAAATATGAAAA+TGG + Chr1:77452429-77452448 None:intergenic 10.0%
!! ATTATCATTGATAAATATAA+GGG + Chr1:77446187-77446206 None:intergenic 10.0%
!! CTAATAAATATAAAAAACAT+GGG + Chr1:77446006-77446025 None:intergenic 10.0%
!! TATATTTGTTTGAAAAAATT+AGG + Chr1:77446232-77446251 None:intergenic 10.0%
!! TATTTAAGTATAAAGAATAT+AGG - Chr1:77448632-77448651 MsG0180004396.01.T01:intron 10.0%
!! TATTTATTAGTAATAAATAC+CGG - Chr1:77446016-77446035 MsG0180004396.01.T01:intron 10.0%
!!! ACTAATTTATATTTTTCTTT+AGG - Chr1:77442468-77442487 MsG0180004396.01.T01:intron 10.0%
!!! ATAGAAATTTTGTTTAAAAT+TGG - Chr1:77452669-77452688 MsG0180004396.01.T01:CDS 10.0%
!!! ATTTATTTTTATTTTTCTTC+AGG - Chr1:77452061-77452080 MsG0180004396.01.T01:CDS 10.0%
!!! CTAATTTATATTTTTCTTTA+GGG - Chr1:77442469-77442488 MsG0180004396.01.T01:intron 10.0%
!!! TAGAAATTTTGTTTAAAATT+GGG - Chr1:77452670-77452689 MsG0180004396.01.T01:CDS 10.0%
!!! TATACATAATATAATTTTTG+TGG + Chr1:77442428-77442447 None:intergenic 10.0%
!!! TATATATTTTTTTTTTGTAG+GGG + Chr1:77440052-77440071 None:intergenic 10.0%
!!! TTTATTTAAGTATTTTTCAT+TGG - Chr1:77447651-77447670 MsG0180004396.01.T01:intron 10.0%
!!! TTTCATAAATTTTGTAAATT+AGG - Chr1:77442623-77442642 MsG0180004396.01.T01:intron 10.0%
!!! TTTTTATTTTTTAAAAAGCA+TGG + Chr1:77453802-77453821 None:intergenic 10.0%
!! AATGTAAGAATAAATTGTAT+TGG - Chr1:77444402-77444421 MsG0180004396.01.T01:intron 15.0%
!! ACATATAATTAAGAGTTTAA+TGG + Chr1:77448855-77448874 None:intergenic 15.0%
!! AGAAAAATATAAATTAGTGT+TGG + Chr1:77442466-77442485 None:intergenic 15.0%
!! ATTATCAAAATGTTACTAAA+AGG - Chr1:77452726-77452745 MsG0180004396.01.T01:intron 15.0%
!! CCAAAAACATAATTATTAAT+TGG + Chr1:77445074-77445093 None:intergenic 15.0%
!! CTAACAAATTTAATATGTTA+GGG - Chr1:77442098-77442117 MsG0180004396.01.T01:intron 15.0%
!! CTAATATTTCAAATAAGTAA+TGG + Chr1:77443304-77443323 None:intergenic 15.0%
!! GATTATCATTGATAAATATA+AGG + Chr1:77446188-77446207 None:intergenic 15.0%
!! TAAAAGAATTCATGAAATAA+GGG + Chr1:77447099-77447118 None:intergenic 15.0%
!! TATATATAATTTAGTTGATC+TGG - Chr1:77441291-77441310 MsG0180004396.01.T01:intron 15.0%
!! TCTAACAAATTTAATATGTT+AGG - Chr1:77442097-77442116 MsG0180004396.01.T01:intron 15.0%
!! TTAAAAGAATTCATGAAATA+AGG + Chr1:77447100-77447119 None:intergenic 15.0%
!! TTAAAATACTGGATAATTAT+GGG + Chr1:77451666-77451685 None:intergenic 15.0%
!! TTATCATTGATAAATATAAG+GGG + Chr1:77446186-77446205 None:intergenic 15.0%
!! TTCACTTAAAATCTTATATA+TGG + Chr1:77451759-77451778 None:intergenic 15.0%
!! TTCTAATTAATTGCATAATT+TGG - Chr1:77441128-77441147 MsG0180004396.01.T01:CDS 15.0%
!! TTGATAAATATAAAAAGAGA+CGG + Chr1:77445785-77445804 None:intergenic 15.0%
!!! AAATTTCTTTCTAAAACATA+GGG - Chr1:77442855-77442874 MsG0180004396.01.T01:intron 15.0%
!!! ACATCTTTTTATTATATTGA+TGG - Chr1:77450704-77450723 MsG0180004396.01.T01:intron 15.0%
!!! ACTATTTTGTTATTACTTAA+AGG + Chr1:77443965-77443984 None:intergenic 15.0%
!!! AGAATTTTTTTCAATATGAA+GGG - Chr1:77450323-77450342 MsG0180004396.01.T01:intron 15.0%
!!! ATGTATTGATTTTTCAATAA+AGG - Chr1:77443607-77443626 MsG0180004396.01.T01:intron 15.0%
!!! ATTTGCTAATAATTTGAAAA+TGG + Chr1:77447493-77447512 None:intergenic 15.0%
!!! CCAATTAATAATTATGTTTT+TGG - Chr1:77445071-77445090 MsG0180004396.01.T01:intron 15.0%
!!! TAAATTTCTTTCTAAAACAT+AGG - Chr1:77442854-77442873 MsG0180004396.01.T01:intron 15.0%
!!! TAACATATTAAATTTGTTAG+AGG + Chr1:77442098-77442117 None:intergenic 15.0%
!!! TAGAATTTTTTTCAATATGA+AGG - Chr1:77450322-77450341 MsG0180004396.01.T01:intron 15.0%
!!! TATGCAAAATTTTAAAATTC+AGG + Chr1:77445435-77445454 None:intergenic 15.0%
!!! TCAATTTTCATATCATTTTA+TGG - Chr1:77444740-77444759 MsG0180004396.01.T01:intron 15.0%
!!! TCTTTATTTGACTTTTTTTT+GGG + Chr1:77441541-77441560 None:intergenic 15.0%
!!! TGATTTTATACAATTATGAT+TGG - Chr1:77446801-77446820 MsG0180004396.01.T01:intron 15.0%
!!! TTAAAGTTTTCTTTAAACAA+TGG - Chr1:77446701-77446720 MsG0180004396.01.T01:intron 15.0%
!!! TTATTATTATTTTTTAGCGA+AGG - Chr1:77447440-77447459 MsG0180004396.01.T01:intron 15.0%
!!! TTCTTTATTTGACTTTTTTT+TGG + Chr1:77441542-77441561 None:intergenic 15.0%
!!! TTTTATTGTGTGTTTTTATT+AGG - Chr1:77448344-77448363 MsG0180004396.01.T01:intron 15.0%
!!! TTTTGAGTAATAAAAGTTTT+TGG + Chr1:77447803-77447822 None:intergenic 15.0%
!!! TTTTTTCAAACAAATATAAG+AGG - Chr1:77446234-77446253 MsG0180004396.01.T01:intron 15.0%
!! AAAAAATTAGACCAAAATTG+TGG + Chr1:77446745-77446764 None:intergenic 20.0%
!! AAAAACATGGGATAAATATT+TGG + Chr1:77445994-77446013 None:intergenic 20.0%
!! AAAAATGATTGAATTCTCAA+AGG - Chr1:77445567-77445586 MsG0180004396.01.T01:CDS 20.0%
!! AAACAATATGTTGTTGAAAA+TGG + Chr1:77440661-77440680 None:intergenic 20.0%
!! AAACGAAAAAAAAATTGCAA+GGG - Chr1:77446934-77446953 MsG0180004396.01.T01:intron 20.0%
!! AAGTAATAACAAAATAGTAG+TGG - Chr1:77443967-77443986 MsG0180004396.01.T01:intron 20.0%
!! AATATCTACTATAGAAAAGA+AGG - Chr1:77440944-77440963 MsG0180004396.01.T01:intron 20.0%
!! AATTATAGTCAATTAGATGT+AGG - Chr1:77451544-77451563 MsG0180004396.01.T01:intron 20.0%
!! ACCATTAAATGAAAAATACA+CGG + Chr1:77439791-77439810 None:intergenic 20.0%
!! ACCTTAATAAACATTTGTAA+TGG - Chr1:77443924-77443943 MsG0180004396.01.T01:intron 20.0%
!! AGAACAAATATAAAAAAACC+AGG + Chr1:77446427-77446446 None:intergenic 20.0%
!! ATAAATACAATAAAGAACAC+GGG + Chr1:77445903-77445922 None:intergenic 20.0%
!! ATATAAGTAAACACTATAGA+TGG - Chr1:77453065-77453084 MsG0180004396.01.T01:intron 20.0%
!! ATATACTTATATACGTTTCA+TGG + Chr1:77441646-77441665 None:intergenic 20.0%
!! ATATTACAACCAACTAATAA+AGG + Chr1:77443499-77443518 None:intergenic 20.0%
!! ATCTAATTTATGAGAAATGA+TGG - Chr1:77453584-77453603 MsG0180004396.01.T01:intron 20.0%
!! CAAACACCATAAAATATAAA+GGG + Chr1:77443737-77443756 None:intergenic 20.0%
!! CCATCTATAAAATAGAAAAT+TGG - Chr1:77450285-77450304 MsG0180004396.01.T01:intron 20.0%
!! GAAATTAAATGAGTATAGAT+GGG + Chr1:77440086-77440105 None:intergenic 20.0%
!! GATAAATACAATAAAGAACA+CGG + Chr1:77445904-77445923 None:intergenic 20.0%
!! GTAAAGAAAATACAAGTATT+AGG - Chr1:77454288-77454307 MsG0180004396.01.T01:intron 20.0%
!! GTTAAAATACTGGATAATTA+TGG + Chr1:77451667-77451686 None:intergenic 20.0%
!! TATTACAACCAACTAATAAA+GGG + Chr1:77443498-77443517 None:intergenic 20.0%
!! TCAAACACCATAAAATATAA+AGG + Chr1:77443738-77443757 None:intergenic 20.0%
!! TGAAAGTAATTGTATAAGTT+GGG + Chr1:77446552-77446571 None:intergenic 20.0%
!! TGAAATTAAATGAGTATAGA+TGG + Chr1:77440087-77440106 None:intergenic 20.0%
!! TGATAAATATAAAAAGAGAC+GGG + Chr1:77445784-77445803 None:intergenic 20.0%
!! TTAATTTCAAAATTGAGATC+TGG - Chr1:77440098-77440117 MsG0180004396.01.T01:CDS 20.0%
!! TTATTAATCACAACATCAAA+AGG + Chr1:77454042-77454061 None:intergenic 20.0%
!! TTGAAAGTAATTGTATAAGT+TGG + Chr1:77446553-77446572 None:intergenic 20.0%
!! TTTAATAGAGATTCCTTAAA+TGG + Chr1:77447735-77447754 None:intergenic 20.0%
!! TTTAATATGTTAGGGAAATA+TGG - Chr1:77442106-77442125 MsG0180004396.01.T01:intron 20.0%
!! TTTATACTAATATGTGTTCA+TGG - Chr1:77449486-77449505 MsG0180004396.01.T01:intron 20.0%
!! TTTATTACTTCTTTAAACGT+GGG + Chr1:77447271-77447290 None:intergenic 20.0%
!! TTTCAAATTATTAGCAAATG+TGG - Chr1:77447494-77447513 MsG0180004396.01.T01:intron 20.0%
!! TTTCTTTGATAGAAAACATT+GGG + Chr1:77452481-77452500 None:intergenic 20.0%
!!! AAAACTATTTTACACTAACA+GGG + Chr1:77448713-77448732 None:intergenic 20.0%
!!! AAACAAATAACGAAAAGTAT+AGG + Chr1:77442018-77442037 None:intergenic 20.0%
!!! AAATAGAAAATTGGTTTATG+AGG - Chr1:77450294-77450313 MsG0180004396.01.T01:intron 20.0%
!!! AACACATGTTAATTTAAAAC+AGG - Chr1:77447041-77447060 MsG0180004396.01.T01:intron 20.0%
!!! AAGAAGATATTTTTGACTAT+TGG - Chr1:77449810-77449829 MsG0180004396.01.T01:intron 20.0%
!!! AAGAGTTATTTGTTACAAAA+TGG - Chr1:77440969-77440988 MsG0180004396.01.T01:intron 20.0%
!!! AAGATTTTTATTTTCAGCTT+AGG - Chr1:77453122-77453141 MsG0180004396.01.T01:intron 20.0%
!!! AAGTTTTATATTGAAATACG+AGG + Chr1:77443794-77443813 None:intergenic 20.0%
!!! AATCATTTTCAAATACGATT+TGG - Chr1:77446204-77446223 MsG0180004396.01.T01:intron 20.0%
!!! AATCCTGATTGAATATTTTT+CGG - Chr1:77453414-77453433 MsG0180004396.01.T01:intron 20.0%
!!! AATTTCTTTCTAAAACATAG+GGG - Chr1:77442856-77442875 MsG0180004396.01.T01:intron 20.0%
!!! ACAAATTCTGAAGTTAATAT+TGG + Chr1:77453896-77453915 None:intergenic 20.0%
!!! AGAAAAAGGTATTTAATCAA+TGG - Chr1:77442541-77442560 MsG0180004396.01.T01:intron 20.0%
!!! AGATATTTTGGTTTTATTGT+TGG + Chr1:77440931-77440950 None:intergenic 20.0%
!!! AGATCTGGAATTATAAATTT+AGG - Chr1:77440113-77440132 MsG0180004396.01.T01:CDS 20.0%
!!! ATGTAACAAGTATTTTTTTG+AGG - Chr1:77451605-77451624 MsG0180004396.01.T01:intron 20.0%
!!! CCAATTTTCTATTTTATAGA+TGG + Chr1:77450288-77450307 None:intergenic 20.0%
!!! CTTTATTTGACTTTTTTTTG+GGG + Chr1:77441540-77441559 None:intergenic 20.0%
!!! CTTTTCTATAGTAGATATTT+TGG + Chr1:77440943-77440962 None:intergenic 20.0%
!!! GTTTGTTATGTCATAATAAT+GGG - Chr1:77448915-77448934 MsG0180004396.01.T01:intron 20.0%
!!! TAAAACTATTTTACACTAAC+AGG + Chr1:77448714-77448733 None:intergenic 20.0%
!!! TCTATTTTCATTCTTATGTT+AGG + Chr1:77445230-77445249 None:intergenic 20.0%
!!! TGTGTTAACTTTTTTTTTGA+AGG - Chr1:77447018-77447037 MsG0180004396.01.T01:intron 20.0%
!!! TGTTGTTTAACTATTGTATT+GGG - Chr1:77443462-77443481 MsG0180004396.01.T01:intron 20.0%
!!! TGTTTGTTATGTCATAATAA+TGG - Chr1:77448914-77448933 MsG0180004396.01.T01:intron 20.0%
!!! TTGTTGTTTAACTATTGTAT+TGG - Chr1:77443461-77443480 MsG0180004396.01.T01:intron 20.0%
!!! TTTACTTGGATATATCATTT+TGG - Chr1:77449282-77449301 MsG0180004396.01.T01:intron 20.0%
!!! TTTTATTACTTCTTTAAACG+TGG + Chr1:77447272-77447291 None:intergenic 20.0%
!!! TTTTCTTTGATAGAAAACAT+TGG + Chr1:77452482-77452501 None:intergenic 20.0%
! AAACCTAAATAGAAAGAACA+GGG + Chr1:77451177-77451196 None:intergenic 25.0%
! AAAGATCAATACTCTTCTTT+CGG + Chr1:77452319-77452338 None:intergenic 25.0%
! AAAGATCCATTAAATGAGTA+CGG - Chr1:77439967-77439986 MsG0180004396.01.T01:three_prime_UTR 25.0%
! AAATACACACAGATACTTAT+AGG - Chr1:77444916-77444935 MsG0180004396.01.T01:intron 25.0%
! AACATCCTCTATATATATAG+AGG - Chr1:77439859-77439878 MsG0180004396.01.T01:three_prime_UTR 25.0%
! AACTATAGTGCTGTATATAT+AGG + Chr1:77440759-77440778 None:intergenic 25.0%
! AACTATTACATATCATTGCT+TGG + Chr1:77454724-77454743 None:intergenic 25.0%
! AAGTTTCATGCATACAATAA+AGG + Chr1:77453301-77453320 None:intergenic 25.0%
! AATAAATAGCGAAATGAGTT+TGG + Chr1:77444107-77444126 None:intergenic 25.0%
! AATCAGCTTATAGTGATTTA+AGG + Chr1:77450502-77450521 None:intergenic 25.0%
! ACCACTAGATCAAAAATAAA+TGG + Chr1:77440461-77440480 None:intergenic 25.0%
! ACCATTAGATCAAAAATAGA+TGG - Chr1:77439935-77439954 MsG0180004396.01.T01:three_prime_UTR 25.0%
! AGAAAATACAAGTATTAGGA+TGG - Chr1:77454292-77454311 MsG0180004396.01.T01:intron 25.0%
! AGAATCAAGTGTTAAAATAC+TGG + Chr1:77451677-77451696 None:intergenic 25.0%
! AGTAACTATTGTAGTATCAT+TGG + Chr1:77441419-77441438 None:intergenic 25.0%
! AGTTAGTTACAAAATCTTAG+AGG + Chr1:77452949-77452968 None:intergenic 25.0%
! ATAAGATATCCTCTTAATTG+AGG + Chr1:77450955-77450974 None:intergenic 25.0%
! ATACAATTACTTTCAACTTC+TGG - Chr1:77446557-77446576 MsG0180004396.01.T01:intron 25.0%
! ATATATGTATCGTTATGATG+AGG - Chr1:77440560-77440579 MsG0180004396.01.T01:intron 25.0%
! ATATGTTGTTGAAAATGGAA+AGG + Chr1:77440656-77440675 None:intergenic 25.0%
! ATCAAAACTTAGACAAGATT+TGG - Chr1:77451261-77451280 MsG0180004396.01.T01:CDS 25.0%
! ATCAGCTTATAGTGATTTAA+GGG + Chr1:77450501-77450520 None:intergenic 25.0%
! ATCTAGTTATCATGCTATAA+TGG + Chr1:77453946-77453965 None:intergenic 25.0%
! ATGTGAATGTATACATAAAG+AGG + Chr1:77441030-77441049 None:intergenic 25.0%
! ATTAATATATGTGTACCCTA+AGG + Chr1:77441372-77441391 None:intergenic 25.0%
! CAAACGAAAAAAAAATTGCA+AGG - Chr1:77446933-77446952 MsG0180004396.01.T01:intron 25.0%
! CACCTTATAATATAGATACT+CGG + Chr1:77454763-77454782 None:intergenic 25.0%
! CAGATATAAGTATGAGTTAA+AGG - Chr1:77452616-77452635 MsG0180004396.01.T01:intron 25.0%
! GAAAAGCAATAATGATTTAG+AGG - Chr1:77443695-77443714 MsG0180004396.01.T01:intron 25.0%
! GAAAATATCTACATTCCTAA+GGG + Chr1:77446844-77446863 None:intergenic 25.0%
! GAGAATAATGAGAATGATTA+TGG + Chr1:77440484-77440503 None:intergenic 25.0%
! GATAAATATAAAAAGAGACG+GGG + Chr1:77445783-77445802 None:intergenic 25.0%
! GATGGAATATATATCACAAA+TGG + Chr1:77450270-77450289 None:intergenic 25.0%
! GATTATAATTAGATGTTGTG+AGG - Chr1:77447572-77447591 MsG0180004396.01.T01:intron 25.0%
! GATTTCTGCATAAAAATTGT+AGG + Chr1:77442290-77442309 None:intergenic 25.0%
! GCCATTACAAATGTTTATTA+AGG + Chr1:77443928-77443947 None:intergenic 25.0%
! GGGTACACATATATTAATTT+AGG - Chr1:77441374-77441393 MsG0180004396.01.T01:intron 25.0%
! GTATTTGTCAAATCGTATTT+GGG + Chr1:77446361-77446380 None:intergenic 25.0%
! GTCCAACAAAATTAAGAAAA+GGG - Chr1:77451031-77451050 MsG0180004396.01.T01:intron 25.0%
! GTTGTTGACACATATTATAT+TGG - Chr1:77444310-77444329 MsG0180004396.01.T01:intron 25.0%
! TAAATCACTATAAGCTGATT+TGG - Chr1:77450502-77450521 MsG0180004396.01.T01:intron 25.0%
! TAACATTGAAGAGTAATCAA+TGG - Chr1:77445332-77445351 MsG0180004396.01.T01:intron 25.0%
! TAATAAACATTTGTAATGGC+AGG - Chr1:77443928-77443947 MsG0180004396.01.T01:intron 25.0%
! TACAATACACTGAAAATGAT+GGG - Chr1:77450845-77450864 MsG0180004396.01.T01:intron 25.0%
! TACAATTACTTTCAACTTCT+GGG - Chr1:77446558-77446577 MsG0180004396.01.T01:intron 25.0%
! TACATCCTCTATATATATAG+AGG + Chr1:77439867-77439886 None:intergenic 25.0%
! TACGACAATTGTGAAAATAA+TGG - Chr1:77442508-77442527 MsG0180004396.01.T01:intron 25.0%
! TATAATAGAAAACAAAGGAC+CGG + Chr1:77446038-77446057 None:intergenic 25.0%
! TATATTCAATTCACTCGTAT+AGG - Chr1:77440597-77440616 MsG0180004396.01.T01:intron 25.0%
! TATTACATTGTGTCAACAAT+AGG + Chr1:77443431-77443450 None:intergenic 25.0%
! TATTATTAAACTTCTCCCTT+AGG - Chr1:77446826-77446845 MsG0180004396.01.T01:intron 25.0%
! TCTGTTCATCAATGTAAAAT+TGG + Chr1:77454447-77454466 None:intergenic 25.0%
! TCTTAAACTCATAGAAAAGT+AGG + Chr1:77451487-77451506 None:intergenic 25.0%
! TCTTCAAGTATAGAGAATAT+AGG - Chr1:77448683-77448702 MsG0180004396.01.T01:intron 25.0%
! TGAAAATATCTACATTCCTA+AGG + Chr1:77446845-77446864 None:intergenic 25.0%
! TGAATAATTGTGTGGAAATT+GGG + Chr1:77448110-77448129 None:intergenic 25.0%
! TGGTACTTATAAATGATATC+AGG + Chr1:77447783-77447802 None:intergenic 25.0%
! TGTATTTGTCAAATCGTATT+TGG + Chr1:77446362-77446381 None:intergenic 25.0%
! TGTCCAACAAAATTAAGAAA+AGG - Chr1:77451030-77451049 MsG0180004396.01.T01:intron 25.0%
! TGTGAATGTATACATAAAGA+GGG + Chr1:77441029-77441048 None:intergenic 25.0%
! TTAATGATGTAAAGTTAGTG+AGG - Chr1:77447628-77447647 MsG0180004396.01.T01:intron 25.0%
! TTAATTGCAAGCCTAAAAAA+GGG + Chr1:77451711-77451730 None:intergenic 25.0%
! TTACATCAAACTTCAATACT+AGG - Chr1:77443266-77443285 MsG0180004396.01.T01:intron 25.0%
! TTAGAACTACATCAAAGTTT+GGG - Chr1:77449305-77449324 MsG0180004396.01.T01:intron 25.0%
! TTATTATTAAGAAATGTGCG+TGG + Chr1:77451233-77451252 None:intergenic 25.0%
! TTCATCTTCATTAATTGATG+TGG - Chr1:77448563-77448582 MsG0180004396.01.T01:intron 25.0%
! TTGAATAATTGTGTGGAAAT+TGG + Chr1:77448111-77448130 None:intergenic 25.0%
! TTGTACATATGATGTTTAGA+TGG - Chr1:77441158-77441177 MsG0180004396.01.T01:intron 25.0%
! TTTAATTGCAAGCCTAAAAA+AGG + Chr1:77451712-77451731 None:intergenic 25.0%
! TTTGCAATTGAATAATTGTG+TGG + Chr1:77448118-77448137 None:intergenic 25.0%
!! AAATCACTATAAGCTGATTT+GGG - Chr1:77450503-77450522 MsG0180004396.01.T01:intron 25.0%
!! AAATTAGTCTCTTATGAAAG+TGG - Chr1:77448459-77448478 MsG0180004396.01.T01:intron 25.0%
!! AACTGAATTCATAACAGTTT+TGG - Chr1:77452874-77452893 MsG0180004396.01.T01:intron 25.0%
!! AACTGTTATGAATTCAGTTT+TGG + Chr1:77452873-77452892 None:intergenic 25.0%
!! AAGTTCTTTAGATGTTTTAC+AGG - Chr1:77450197-77450216 MsG0180004396.01.T01:intron 25.0%
!! AAGTTTTCTTACCACAATTT+TGG - Chr1:77446731-77446750 MsG0180004396.01.T01:intron 25.0%
!! AATCAACTGTCTTTCAATTT+TGG - Chr1:77441958-77441977 MsG0180004396.01.T01:intron 25.0%
!! AATTTGATGATTGCTTACAT+AGG + Chr1:77440721-77440740 None:intergenic 25.0%
!! ACCGTGTATTTTTCATTTAA+TGG - Chr1:77439787-77439806 MsG0180004396.01.T01:three_prime_UTR 25.0%
!! ACTCTTTATATTGTTGATGA+AGG - Chr1:77441469-77441488 MsG0180004396.01.T01:intron 25.0%
!! ATCCTGATTGAATATTTTTC+GGG - Chr1:77453415-77453434 MsG0180004396.01.T01:intron 25.0%
!! ATCGAAGATTAAATCCTTTT+AGG + Chr1:77444263-77444282 None:intergenic 25.0%
!! ATTTTCTTTACCATTATTCG+TGG + Chr1:77454279-77454298 None:intergenic 25.0%
!! CTCTTTCCCTTTATATTTTA+TGG - Chr1:77443728-77443747 MsG0180004396.01.T01:intron 25.0%
!! GATTTTACATTTAAATACCC+AGG + Chr1:77454798-77454817 None:intergenic 25.0%
!! GTAAAACTATTTTACACCAA+TGG - Chr1:77448822-77448841 MsG0180004396.01.T01:intron 25.0%
!! GTTTTGTCTTGTATCTTTTT+TGG - Chr1:77448956-77448975 MsG0180004396.01.T01:intron 25.0%
!! TAAAAGTGTATCTTATTCTG+AGG + Chr1:77446684-77446703 None:intergenic 25.0%
!! TAAATATATCTGCATGCTTT+TGG - Chr1:77454070-77454089 MsG0180004396.01.T01:intron 25.0%
!! TATCAACTACATCTTTTACT+TGG - Chr1:77449268-77449287 MsG0180004396.01.T01:intron 25.0%
!! TATTTGTTACAAAATGGACT+TGG - Chr1:77440975-77440994 MsG0180004396.01.T01:intron 25.0%
!! TCTAAGTTAACTGATTCAAT+AGG - Chr1:77452253-77452272 MsG0180004396.01.T01:CDS 25.0%
!! TCTAATACCTTTTACCAATA+AGG + Chr1:77449758-77449777 None:intergenic 25.0%
!! TTACATACTTTTGTAAATCC+AGG + Chr1:77451149-77451168 None:intergenic 25.0%
!! TTATTATATTGATGGCTTTG+AGG - Chr1:77450712-77450731 MsG0180004396.01.T01:intron 25.0%
!! TTATTGGAAGTGCAAATAAT+TGG - Chr1:77440810-77440829 MsG0180004396.01.T01:intron 25.0%
!! TTTTATCTAAACCATTTCCA+AGG + Chr1:77453852-77453871 None:intergenic 25.0%
!!! ACAGTTGATTTTAAATACCT+TGG + Chr1:77441948-77441967 None:intergenic 25.0%
!!! ACCATTTATTTTTGATCTAG+TGG - Chr1:77440457-77440476 MsG0180004396.01.T01:CDS 25.0%
!!! ACCATTTTTCCTACTTAAAT+GGG + Chr1:77449565-77449584 None:intergenic 25.0%
!!! ATGTTTTTTCAGATGATTGT+TGG - Chr1:77441903-77441922 MsG0180004396.01.T01:intron 25.0%
!!! GCAAAATTTGTTGTTAATGT+TGG - Chr1:77448133-77448152 MsG0180004396.01.T01:intron 25.0%
!!! GGCAACAGAAATTTTAAAAA+GGG + Chr1:77452190-77452209 None:intergenic 25.0%
!!! TCATTTTTTCTTCCTTCAAT+GGG + Chr1:77447187-77447206 None:intergenic 25.0%
!!! TCTAATGCTTCGTTTTTTTT+AGG - Chr1:77446487-77446506 MsG0180004396.01.T01:intron 25.0%
!!! TGGCAACAGAAATTTTAAAA+AGG + Chr1:77452191-77452210 None:intergenic 25.0%
!!! TGTGACTTGTTTTCAATAAT+AGG + Chr1:77451392-77451411 None:intergenic 25.0%
!!! TGTTTTTTCAGATGATTGTT+GGG - Chr1:77441904-77441923 MsG0180004396.01.T01:intron 25.0%
AAAGAATGATGAGAAGAACA+AGG - Chr1:77439718-77439737 MsG0180004396.01.T01:three_prime_UTR 30.0%
AAAGCACAAACATAAACAGT+GGG - Chr1:77446636-77446655 MsG0180004396.01.T01:intron 30.0%
AAATGGAGACATATCTCTAT+CGG - Chr1:77444854-77444873 MsG0180004396.01.T01:CDS 30.0%
AAATTAGTGATGTGTAACGT+TGG - Chr1:77447707-77447726 MsG0180004396.01.T01:intron 30.0%
AACCAAGTTATTCAGATTTG+AGG + Chr1:77450404-77450423 None:intergenic 30.0%
AAGAATGATGAGAAGAACAA+GGG - Chr1:77439719-77439738 MsG0180004396.01.T01:three_prime_UTR 30.0%
AATTAGTGATGTGTAACGTT+GGG - Chr1:77447708-77447727 MsG0180004396.01.T01:intron 30.0%
ACCACATACTTGATTCTTAT+TGG + Chr1:77448746-77448765 None:intergenic 30.0%
ACCCATTTAAGTAGGAAAAA+TGG - Chr1:77449561-77449580 MsG0180004396.01.T01:intron 30.0%
ACTGTGTTGTAAACATTCAA+TGG - Chr1:77444994-77445013 MsG0180004396.01.T01:intron 30.0%
AGAAAAGTAAAGCCATCAAA+GGG + Chr1:77450919-77450938 None:intergenic 30.0%
AGAACAAGTAGCTAATATCA+CGG + Chr1:77449904-77449923 None:intergenic 30.0%
AGAGCGACAAATAAATGAAT+AGG - Chr1:77444361-77444380 MsG0180004396.01.T01:intron 30.0%
AGAGTATGTCGAAAATGAAA+AGG - Chr1:77453715-77453734 MsG0180004396.01.T01:CDS 30.0%
AGATAACTAGTAAGAACATC+TGG + Chr1:77453334-77453353 None:intergenic 30.0%
AGCGAATCAATTGAAAGAAA+CGG - Chr1:77439674-77439693 MsG0180004396.01.T01:three_prime_UTR 30.0%
AGGAACAATGAATGGATAAA+TGG + Chr1:77444432-77444451 None:intergenic 30.0%
ATAGAAAACATTGGGTAACT+TGG + Chr1:77452473-77452492 None:intergenic 30.0%
ATAGAGGATAGAATTAGAGT+TGG - Chr1:77452789-77452808 MsG0180004396.01.T01:intron 30.0%
ATATCCTCCTTATTGGTAAA+AGG - Chr1:77449748-77449767 MsG0180004396.01.T01:intron 30.0%
ATATTGAAGATAACTGGAAG+AGG - Chr1:77442938-77442957 MsG0180004396.01.T01:intron 30.0%
ATCACATTTGCGAAGATATT+AGG - Chr1:77445739-77445758 MsG0180004396.01.T01:intron 30.0%
ATCCATTCATTGTTCCTAAA+AGG - Chr1:77444435-77444454 MsG0180004396.01.T01:intron 30.0%
ATCTATTATAGAAGTCATGC+TGG + Chr1:77443144-77443163 None:intergenic 30.0%
ATGAACTAAACCACGAATAA+TGG - Chr1:77454266-77454285 MsG0180004396.01.T01:intron 30.0%
ATGACATGCTTTCAAATGTA+AGG - Chr1:77452105-77452124 MsG0180004396.01.T01:intron 30.0%
ATGGAATAAGTATTTGTCAC+TGG + Chr1:77445843-77445862 None:intergenic 30.0%
ATGGTATAAGCGTTAGAAAA+AGG - Chr1:77442527-77442546 MsG0180004396.01.T01:intron 30.0%
ATTCCCTGTTCTTTCTATTT+AGG - Chr1:77451171-77451190 MsG0180004396.01.T01:intron 30.0%
CATACAATAAAGGTAAACCT+AGG + Chr1:77453291-77453310 None:intergenic 30.0%
CATAGGTCATAAATTGATAG+AGG - Chr1:77452773-77452792 MsG0180004396.01.T01:intron 30.0%
CATATCAAGAAACAAAGCAT+TGG + Chr1:77446516-77446535 None:intergenic 30.0%
CATATTTGCCTTCAATCAAT+GGG + Chr1:77453096-77453115 None:intergenic 30.0%
CATTTAAGTAGGAAAAATGG+TGG - Chr1:77449564-77449583 MsG0180004396.01.T01:intron 30.0%
CGAGTATCTATATTATAAGG+TGG - Chr1:77454761-77454780 MsG0180004396.01.T01:intron 30.0%
CTATTGTATTGGGTTTAAAC+AGG - Chr1:77443472-77443491 MsG0180004396.01.T01:intron 30.0%
CTGAAGTTAATATTGGAAGT+AGG + Chr1:77453889-77453908 None:intergenic 30.0%
CTTATTCAAAGCCTACAAAA+AGG + Chr1:77450180-77450199 None:intergenic 30.0%
CTTTACTTTGCCTGTATTTA+TGG - Chr1:77452149-77452168 MsG0180004396.01.T01:intron 30.0%
GAAACCTAAATAGAAAGAAC+AGG + Chr1:77451178-77451197 None:intergenic 30.0%
GAACATATATACCTGTATCT+CGG + Chr1:77441228-77441247 None:intergenic 30.0%
GAAGTTATTGCAGTAAATCA+AGG - Chr1:77443560-77443579 MsG0180004396.01.T01:intron 30.0%
GAATGAGTAATGAACAAATG+AGG - Chr1:77444792-77444811 MsG0180004396.01.T01:intron 30.0%
GACATTTCAACCATAAATAC+AGG + Chr1:77452162-77452181 None:intergenic 30.0%
GAGAATGATGAGAATGATTA+TGG - Chr1:77439912-77439931 MsG0180004396.01.T01:three_prime_UTR 30.0%
GAGCATGATAAAAGATACTA+AGG - Chr1:77451951-77451970 MsG0180004396.01.T01:intron 30.0%
GAGTATGTCGAAAATGAAAA+GGG - Chr1:77453716-77453735 MsG0180004396.01.T01:CDS 30.0%
GCAAAAAATGTCTAGTACTT+TGG + Chr1:77452000-77452019 None:intergenic 30.0%
GTACAATACACTGAAAATGA+TGG - Chr1:77450844-77450863 MsG0180004396.01.T01:intron 30.0%
GTAGAAATTCATTATGCAAC+TGG + Chr1:77452345-77452364 None:intergenic 30.0%
GTCCTATTCATTAATCAACA+TGG + Chr1:77448531-77448550 None:intergenic 30.0%
GTTAGAACTACATCAAAGTT+TGG - Chr1:77449304-77449323 MsG0180004396.01.T01:intron 30.0%
GTTTAATGGTTATACACCAT+TGG + Chr1:77448841-77448860 None:intergenic 30.0%
TAACTTGGTCAATTCAGTTA+AGG - Chr1:77454134-77454153 MsG0180004396.01.T01:intron 30.0%
TAATAGAATCTAGGTAGCTT+AGG - Chr1:77452901-77452920 MsG0180004396.01.T01:intron 30.0%
TACGTATTTACTACCAATTC+CGG + Chr1:77453217-77453236 None:intergenic 30.0%
TAGAAAACATTGGGTAACTT+GGG + Chr1:77452472-77452491 None:intergenic 30.0%
TAGAAAAGTAAAGCCATCAA+AGG + Chr1:77450920-77450939 None:intergenic 30.0%
TATAATTTCAGCTGATGCAA+TGG - Chr1:77441328-77441347 MsG0180004396.01.T01:intron 30.0%
TCAAAATTCACATCACTACT+TGG - Chr1:77454824-77454843 MsG0180004396.01.T01:intron 30.0%
TCACATTTGCGAAGATATTA+GGG - Chr1:77445740-77445759 MsG0180004396.01.T01:intron 30.0%
TCCAATAAGAATCAAGTATG+TGG - Chr1:77448742-77448761 MsG0180004396.01.T01:intron 30.0%
TCCATTCATTGTTCCTAAAA+GGG - Chr1:77444436-77444455 MsG0180004396.01.T01:intron 30.0%
TCTATTATAGAAGTCATGCT+GGG + Chr1:77443143-77443162 None:intergenic 30.0%
TGAACCAATTCTCAAATTAG+TGG + Chr1:77452211-77452230 None:intergenic 30.0%
TGAACGTGTTAAACTCAAAT+TGG - Chr1:77448293-77448312 MsG0180004396.01.T01:intron 30.0%
TGAATGACAAATACTTATCC+TGG - Chr1:77446406-77446425 MsG0180004396.01.T01:CDS 30.0%
TGCAAATGATATTGACAACA+AGG + Chr1:77443853-77443872 None:intergenic 30.0%
TGCCGAGTATCTATATTATA+AGG - Chr1:77454758-77454777 MsG0180004396.01.T01:intron 30.0%
TGGAAGAAAACAAAATACTG+TGG - Chr1:77444760-77444779 MsG0180004396.01.T01:intron 30.0%
TGTATCCTAAAAGAAACGAA+TGG + Chr1:77454858-77454877 None:intergenic 30.0%
TTAGGAGAACTGACATAATA+AGG - Chr1:77440395-77440414 MsG0180004396.01.T01:intron 30.0%
TTAGGATTGCTATATAAGCA+AGG - Chr1:77452919-77452938 MsG0180004396.01.T01:intron 30.0%
TTATGGAACAAAACATGTTG+AGG - Chr1:77453463-77453482 MsG0180004396.01.T01:intron 30.0%
TTCTTTGTTCCTCAATTAAG+AGG - Chr1:77450943-77450962 MsG0180004396.01.T01:intron 30.0%
TTGCACTTCCAATAATCTTT+GGG + Chr1:77440805-77440824 None:intergenic 30.0%
TTGGAGAGAGAAAAAATGAA+GGG - Chr1:77444959-77444978 MsG0180004396.01.T01:intron 30.0%
TTTAATAAGGCTTCACTCAT+TGG + Chr1:77442655-77442674 None:intergenic 30.0%
TTTACCAATAAGGAGGATAT+GGG + Chr1:77449748-77449767 None:intergenic 30.0%
TTTATCATGCTCATGACATT+TGG + Chr1:77451943-77451962 None:intergenic 30.0%
TTTGCACTTCCAATAATCTT+TGG + Chr1:77440806-77440825 None:intergenic 30.0%
TTTGGAGAGAGAAAAAATGA+AGG - Chr1:77444958-77444977 MsG0180004396.01.T01:intron 30.0%
! AAAAGCACAAACATAAACAG+TGG - Chr1:77446635-77446654 MsG0180004396.01.T01:intron 30.0%
! AATACCTTTTACCAATAAGG+AGG + Chr1:77449755-77449774 None:intergenic 30.0%
! ACAAAATAGTAGTGGTCTTA+TGG - Chr1:77443975-77443994 MsG0180004396.01.T01:intron 30.0%
! TACTTCACAAAGACGTATTT+TGG - Chr1:77444940-77444959 MsG0180004396.01.T01:intron 30.0%
! TAGTGATTTAAGGGTATATG+AGG + Chr1:77450492-77450511 None:intergenic 30.0%
! TGACGTGACATTTAGTTTAA+GGG + Chr1:77453371-77453390 None:intergenic 30.0%
! TGCCATGTTGATTAATGAAT+AGG - Chr1:77448526-77448545 MsG0180004396.01.T01:intron 30.0%
! TGCCCTTTTCTTAATTTTGT+TGG + Chr1:77451036-77451055 None:intergenic 30.0%
! TTATGATGTGCTTCAAGTTA+TGG - Chr1:77441258-77441277 MsG0180004396.01.T01:intron 30.0%
! TTGAAAATGGAAAGGAGTTT+TGG + Chr1:77440648-77440667 None:intergenic 30.0%
! TTGACGTGACATTTAGTTTA+AGG + Chr1:77453372-77453391 None:intergenic 30.0%
! TTTAAAAGCGCATAGCAATT+TGG + Chr1:77442838-77442857 None:intergenic 30.0%
! TTTTACCAATAAGGAGGATA+TGG + Chr1:77449749-77449768 None:intergenic 30.0%
!! ATCGTTCTCATTTTAGCATT+TGG - Chr1:77443372-77443391 MsG0180004396.01.T01:intron 30.0%
!! ATTGTGTTTTTGTCTTTCGT+AGG - Chr1:77449372-77449391 MsG0180004396.01.T01:intron 30.0%
!! CAAGTTAACAAACTTTTTCC+TGG + Chr1:77454121-77454140 None:intergenic 30.0%
!! CACCATTTTTCCTACTTAAA+TGG + Chr1:77449566-77449585 None:intergenic 30.0%
!! CAGGAAAAAGTTTGTTAACT+TGG - Chr1:77454119-77454138 MsG0180004396.01.T01:intron 30.0%
!! GGGATTTGATGAGTTTTAAT+TGG - Chr1:77448791-77448810 MsG0180004396.01.T01:intron 30.0%
!! GTAACTCAAGTTCTAAAGTA+TGG + Chr1:77449151-77449170 None:intergenic 30.0%
!! TCGTTCTCATTTTAGCATTT+GGG - Chr1:77443373-77443392 MsG0180004396.01.T01:intron 30.0%
!! TTAACAAACTTTTTCCTGGT+TGG + Chr1:77454117-77454136 None:intergenic 30.0%
!! TTCTGATTTCTTTAGAGTGT+GGG - Chr1:77454223-77454242 MsG0180004396.01.T01:intron 30.0%
!! TTTATTTTCAGCTTAGGCAT+TGG - Chr1:77453128-77453147 MsG0180004396.01.T01:intron 30.0%
!! TTTCTGATTTCTTTAGAGTG+TGG - Chr1:77454222-77454241 MsG0180004396.01.T01:intron 30.0%
!!! ATGAATTCAGTTTTGGAGTT+TGG + Chr1:77452866-77452885 None:intergenic 30.0%
!!! ATTCAAGTTGTCCCTTTTTT+AGG - Chr1:77451697-77451716 MsG0180004396.01.T01:CDS 30.0%
!!! ATTCACTTGCTGTTGTTTTT+TGG - Chr1:77451831-77451850 MsG0180004396.01.T01:intron 30.0%
!!! CTCATTTTTTCTTCCTTCAA+TGG + Chr1:77447188-77447207 None:intergenic 30.0%
!!! GCCATCTATTTTTGATCTAA+TGG + Chr1:77439939-77439958 None:intergenic 30.0%
!!! GTCTCCATTTTAGAATATCA+GGG + Chr1:77444844-77444863 None:intergenic 30.0%
!!! TGATTGAATATTTTTCGGGT+GGG - Chr1:77453419-77453438 MsG0180004396.01.T01:intron 30.0%
!!! TGTCTCCATTTTAGAATATC+AGG + Chr1:77444845-77444864 None:intergenic 30.0%
!!! TTGGTTTTTTGATACACAGA+TGG - Chr1:77448152-77448171 MsG0180004396.01.T01:intron 30.0%
!!! TTGTATCTTTTTTGGTTCCA+GGG - Chr1:77448964-77448983 MsG0180004396.01.T01:intron 30.0%
!!! TTTTTTCCGCATTTTAAGGA+AGG + Chr1:77451796-77451815 None:intergenic 30.0%
AAATAATTGGAGCAATGGCT+AGG - Chr1:77440823-77440842 MsG0180004396.01.T01:intron 35.0%
AAATGATGAACTCATGAACC+AGG - Chr1:77454675-77454694 MsG0180004396.01.T01:intron 35.0%
AAGAATCAAGTATGTGGTAG+TGG - Chr1:77448748-77448767 MsG0180004396.01.T01:intron 35.0%
AATAATTGGAGCAATGGCTA+GGG - Chr1:77440824-77440843 MsG0180004396.01.T01:intron 35.0%
AATATAAAAAGAGACGGGGA+TGG + Chr1:77445779-77445798 None:intergenic 35.0%
AATCATAATCCTCATCTGGT+TGG - Chr1:77449639-77449658 MsG0180004396.01.T01:intron 35.0%
AATGATGAACTCATGAACCA+GGG - Chr1:77454676-77454695 MsG0180004396.01.T01:intron 35.0%
AATTCAGTTAAGGATTCTGG+AGG - Chr1:77454144-77454163 MsG0180004396.01.T01:intron 35.0%
ACAGAACTAGAACAGATAAG+TGG - Chr1:77454462-77454481 MsG0180004396.01.T01:intron 35.0%
ACTGAATCATAATCCTCATC+TGG - Chr1:77449635-77449654 MsG0180004396.01.T01:intron 35.0%
AGAACTGACATAATAAGGAG+AGG - Chr1:77440400-77440419 MsG0180004396.01.T01:intron 35.0%
AGAATCAAGTATGTGGTAGT+GGG - Chr1:77448749-77448768 MsG0180004396.01.T01:intron 35.0%
AGGTAGTAAGTTAACAGGAA+CGG - Chr1:77449058-77449077 MsG0180004396.01.T01:intron 35.0%
AGTAGATGCCAGAGATTTAT+GGG - Chr1:77444066-77444085 MsG0180004396.01.T01:intron 35.0%
AGTGCAAATAATTGGAGCAA+TGG - Chr1:77440818-77440837 MsG0180004396.01.T01:intron 35.0%
ATACAACAGCATATCACATC+AGG + Chr1:77451587-77451606 None:intergenic 35.0%
ATATAAAAAGAGACGGGGAT+GGG + Chr1:77445778-77445797 None:intergenic 35.0%
ATATGTGTTCATGGAAACCA+TGG - Chr1:77449495-77449514 MsG0180004396.01.T01:intron 35.0%
ATGCCAAAACATTTGCTTCT+TGG - Chr1:77442358-77442377 MsG0180004396.01.T01:intron 35.0%
ATGCTATAGCAACATACTGT+TGG + Chr1:77453745-77453764 None:intergenic 35.0%
ATGTAATTCTGTCGTTGCAT+TGG - Chr1:77449953-77449972 MsG0180004396.01.T01:intron 35.0%
ATTCGAAGAGAAAACTGATC+TGG + Chr1:77447963-77447982 None:intergenic 35.0%
ATTTCATGTCTTAGTGATCC+AGG + Chr1:77442333-77442352 None:intergenic 35.0%
CAAATACCAAGCTAACAAGT+GGG + Chr1:77453993-77454012 None:intergenic 35.0%
CAAATGCTAGTTACCTTACA+AGG + Chr1:77451513-77451532 None:intergenic 35.0%
CACCCGAAAAATATTCAATC+AGG + Chr1:77453420-77453439 None:intergenic 35.0%
CAGGAGATATTGAAGATAAC+TGG - Chr1:77442932-77442951 MsG0180004396.01.T01:intron 35.0%
CAGGTTGTAATAAGAGAGAT+GGG - Chr1:77440192-77440211 MsG0180004396.01.T01:intron 35.0%
CATAAATCATCTGAATCCAC+TGG + Chr1:77448180-77448199 None:intergenic 35.0%
CATGCATGGATGAAAATACA+TGG + Chr1:77454176-77454195 None:intergenic 35.0%
CATGTATCGTTGTAAAAGAG+AGG + Chr1:77450103-77450122 None:intergenic 35.0%
CATTAGAATTCCTTGTCTGT+AGG - Chr1:77451890-77451909 MsG0180004396.01.T01:intron 35.0%
CATTCATTCATTGCTCCTAA+CGG - Chr1:77444338-77444357 MsG0180004396.01.T01:intron 35.0%
CATTGATATCACAACCGAAA+TGG + Chr1:77441195-77441214 None:intergenic 35.0%
CCATATTTGCCTTCAATCAA+TGG + Chr1:77453097-77453116 None:intergenic 35.0%
CTAGCGAATAAAGAATGAGA+AGG + Chr1:77450450-77450469 None:intergenic 35.0%
CTCCTCAAATCTGAATAACT+TGG - Chr1:77450399-77450418 MsG0180004396.01.T01:intron 35.0%
CTGTAGGCATAGTTTAAAAG+AGG - Chr1:77451906-77451925 MsG0180004396.01.T01:CDS 35.0%
CTTATTGCATCAAGTGCAAA+TGG + Chr1:77444566-77444585 None:intergenic 35.0%
GAAAAAATGAGTCCCCATTA+AGG - Chr1:77447197-77447216 MsG0180004396.01.T01:intron 35.0%
GAAAGTTTAATCCGAGATAC+AGG - Chr1:77441214-77441233 MsG0180004396.01.T01:intron 35.0%
GAACAAGTAGCTAATATCAC+GGG + Chr1:77449903-77449922 None:intergenic 35.0%
GAATCAATTGAAAGAAACGG+TGG - Chr1:77439677-77439696 MsG0180004396.01.T01:three_prime_UTR 35.0%
GAGTTGCTTATCAATTCATG+TGG + Chr1:77443539-77443558 None:intergenic 35.0%
GCTCATTATGTTCACATGAA+AGG - Chr1:77442170-77442189 MsG0180004396.01.T01:intron 35.0%
GGTATAAAGTGGGATTATGT+GGG - Chr1:77448770-77448789 MsG0180004396.01.T01:intron 35.0%
GTATAAAGTGGGATTATGTG+GGG - Chr1:77448771-77448790 MsG0180004396.01.T01:intron 35.0%
GTCAATTCAGTTAAGGATTC+TGG - Chr1:77454141-77454160 MsG0180004396.01.T01:intron 35.0%
GTCACAACTCACAATCATTA+CGG + Chr1:77448392-77448411 None:intergenic 35.0%
GTTCATGAGTTCATCATTTC+TGG + Chr1:77454674-77454693 None:intergenic 35.0%
GTTGCCACTAATTTGAGAAT+TGG - Chr1:77452204-77452223 MsG0180004396.01.T01:intron 35.0%
TAAAAGGGAGCGACAAATAA+AGG - Chr1:77444451-77444470 MsG0180004396.01.T01:intron 35.0%
TAAACAGGCCCTTTATTAGT+TGG - Chr1:77443487-77443506 MsG0180004396.01.T01:intron 35.0%
TAAACCTAGGAGAATGGATA+TGG + Chr1:77453278-77453297 None:intergenic 35.0%
TAAAGGTAAACCTAGGAGAA+TGG + Chr1:77453284-77453303 None:intergenic 35.0%
TAACCACCGTACTCATTTAA+TGG + Chr1:77439976-77439995 None:intergenic 35.0%
TACAACAGCATATCACATCA+GGG + Chr1:77451586-77451605 None:intergenic 35.0%
TACTGTATCAGTATCTACAC+CGG - Chr1:77453195-77453214 MsG0180004396.01.T01:intron 35.0%
TAGTAGATGCCAGAGATTTA+TGG - Chr1:77444065-77444084 MsG0180004396.01.T01:intron 35.0%
TATGTCACTATTTCCGTTAC+AGG - Chr1:77451317-77451336 MsG0180004396.01.T01:intron 35.0%
TATGTGTTCATGGAAACCAT+GGG - Chr1:77449496-77449515 MsG0180004396.01.T01:intron 35.0%
TCACACATAGAGAAGAAGAT+TGG + Chr1:77442688-77442707 None:intergenic 35.0%
TCGACATACTCTAATTCATG+CGG + Chr1:77453707-77453726 None:intergenic 35.0%
TCTAGAGAATGAACATGTCA+AGG - Chr1:77449038-77449057 MsG0180004396.01.T01:intron 35.0%
TCTTCTTCTCTATGTGTGAA+TGG - Chr1:77442689-77442708 MsG0180004396.01.T01:CDS 35.0%
TGATGTTTAGATGGAATAGC+TGG - Chr1:77441167-77441186 MsG0180004396.01.T01:intron 35.0%
TGCCAAAACATTTGCTTCTT+GGG - Chr1:77442359-77442378 MsG0180004396.01.T01:intron 35.0%
TGGTCTTCCAGAGTTTAATA+AGG + Chr1:77442668-77442687 None:intergenic 35.0%
TGTATGTTCTCACACCTAAA+AGG - Chr1:77444246-77444265 MsG0180004396.01.T01:intron 35.0%
TGTCAAGGTAGTAAGTTAAC+AGG - Chr1:77449053-77449072 MsG0180004396.01.T01:intron 35.0%
TGTGGTATTGCAGATAAACT+TGG - Chr1:77443654-77443673 MsG0180004396.01.T01:intron 35.0%
TTAAACTATGCCTACAGACA+AGG + Chr1:77451903-77451922 None:intergenic 35.0%
TTACAGGTAAATTCTTCCCA+GGG - Chr1:77450213-77450232 MsG0180004396.01.T01:intron 35.0%
TTAGAATATCAGGGCTTCAT+AGG + Chr1:77444835-77444854 None:intergenic 35.0%
TTAGTTTAAGGGAGAAACAC+AGG + Chr1:77453360-77453379 None:intergenic 35.0%
TTCAAAGCCTACAAAAAGGA+TGG + Chr1:77450176-77450195 None:intergenic 35.0%
TTGAAGACATGGAGATGTAA+TGG - Chr1:77454520-77454539 MsG0180004396.01.T01:intron 35.0%
TTGCAATATTCACTAGCACA+AGG + Chr1:77440872-77440891 None:intergenic 35.0%
TTGTGTAAAACATCAGGGTT+AGG - Chr1:77450817-77450836 MsG0180004396.01.T01:intron 35.0%
TTTACAGGTAAATTCTTCCC+AGG - Chr1:77450212-77450231 MsG0180004396.01.T01:intron 35.0%
TTTGGCTGCTAATAGAATCT+AGG - Chr1:77452892-77452911 MsG0180004396.01.T01:intron 35.0%
! AAAGCATCACAAGATCTCAT+AGG - Chr1:77452756-77452775 MsG0180004396.01.T01:intron 35.0%
! AAGGGCATGTACAAGTTTAA+TGG - Chr1:77451049-77451068 MsG0180004396.01.T01:intron 35.0%
! ACTTGTTAGCTTGGTATTTG+GGG - Chr1:77453993-77454012 MsG0180004396.01.T01:intron 35.0%
! ACTTTACCATTACCCTGTTT+TGG + Chr1:77450747-77450766 None:intergenic 35.0%
! CACTTGTTAGCTTGGTATTT+GGG - Chr1:77453992-77454011 MsG0180004396.01.T01:intron 35.0%
! CAGTGGATTCAGATGATTTA+TGG - Chr1:77448178-77448197 MsG0180004396.01.T01:intron 35.0%
! CCATTGATTGAAGGCAAATA+TGG - Chr1:77453094-77453113 MsG0180004396.01.T01:intron 35.0%
! CTTTACCATTACCCTGTTTT+GGG + Chr1:77450746-77450765 None:intergenic 35.0%
! GAAGCCCTGATATTCTAAAA+TGG - Chr1:77444837-77444856 MsG0180004396.01.T01:intron 35.0%
! GAGTTTAAGAAAGCCTTGTA+AGG - Chr1:77451497-77451516 MsG0180004396.01.T01:intron 35.0%
! GCATATAATTTGATAGCTCC+TGG - Chr1:77448204-77448223 MsG0180004396.01.T01:intron 35.0%
! GTACTCCATTCGTTTCTTTT+AGG - Chr1:77454850-77454869 MsG0180004396.01.T01:intron 35.0%
! TACCCAAGAAGCAAATGTTT+TGG + Chr1:77442364-77442383 None:intergenic 35.0%
! TCACGAACAGGAAAATGTTT+TGG + Chr1:77446127-77446146 None:intergenic 35.0%
! TCAGATTTGAGGAGTACATA+TGG + Chr1:77450393-77450412 None:intergenic 35.0%
! TCAGGTTGTAATAAGAGAGA+TGG - Chr1:77440191-77440210 MsG0180004396.01.T01:intron 35.0%
! TCATTGCAGATTCTCTTTTC+AGG - Chr1:77453519-77453538 MsG0180004396.01.T01:intron 35.0%
! TTTAAGGAAGGCATGAGATT+TGG + Chr1:77451784-77451803 None:intergenic 35.0%
! TTTACCATTACCCTGTTTTG+GGG + Chr1:77450745-77450764 None:intergenic 35.0%
! TTTATTTGTCGCTCCCTTTT+AGG + Chr1:77444452-77444471 None:intergenic 35.0%
!! AGTGAAGCCTTATTAAACTC+TGG - Chr1:77442658-77442677 MsG0180004396.01.T01:CDS 35.0%
!! AGTTCACCGTCACTTATTTT+TGG - Chr1:77451343-77451362 MsG0180004396.01.T01:intron 35.0%
!! CAGCATTTGATAGTGTAGTA+GGG - Chr1:77449834-77449853 MsG0180004396.01.T01:intron 35.0%
!! CTACTATAGTTTCTGGTTTC+AGG + Chr1:77444051-77444070 None:intergenic 35.0%
!! CTGCATGCTTTTGGTTATAT+AGG - Chr1:77454079-77454098 MsG0180004396.01.T01:intron 35.0%
!! CTTTAGAACTTGAGTTACAG+CGG - Chr1:77449153-77449172 MsG0180004396.01.T01:intron 35.0%
!! CTTTCTAAAACATAGGGGAT+GGG - Chr1:77442861-77442880 MsG0180004396.01.T01:intron 35.0%
!! TATATTGATGGCTTTGAGGA+GGG - Chr1:77450716-77450735 MsG0180004396.01.T01:intron 35.0%
!! TCAGCATTTGATAGTGTAGT+AGG - Chr1:77449833-77449852 MsG0180004396.01.T01:intron 35.0%
!! TCCCTTTTAGGAACAATGAA+TGG + Chr1:77444440-77444459 None:intergenic 35.0%
!! TCTTTCTAAAACATAGGGGA+TGG - Chr1:77442860-77442879 MsG0180004396.01.T01:intron 35.0%
!! TTATATTGATGGCTTTGAGG+AGG - Chr1:77450715-77450734 MsG0180004396.01.T01:intron 35.0%
!!! AATTGGGCTATTTTGATGCT+AGG - Chr1:77452686-77452705 MsG0180004396.01.T01:intron 35.0%
!!! ACATCAAAAGGAGCATTTTC+CGG + Chr1:77454030-77454049 None:intergenic 35.0%
!!! ACTTGCTGTTGTTTTTTGGA+TGG - Chr1:77451835-77451854 MsG0180004396.01.T01:intron 35.0%
!!! CTGATTGAATATTTTTCGGG+TGG - Chr1:77453418-77453437 MsG0180004396.01.T01:intron 35.0%
!!! CTTGTATCTTTTTTGGTTCC+AGG - Chr1:77448963-77448982 MsG0180004396.01.T01:intron 35.0%
!!! GGCATTTTTTCCGCATTTTA+AGG + Chr1:77451800-77451819 None:intergenic 35.0%
!!! GTCTAGTACTTTGGTTTTGA+TGG + Chr1:77451991-77452010 None:intergenic 35.0%
!!! TCGTTATACACCGATTCTTT+TGG - Chr1:77447880-77447899 MsG0180004396.01.T01:intron 35.0%
!!! TTTTTTCTTCCTTCAATGGG+AGG + Chr1:77447184-77447203 None:intergenic 35.0%
AACATTTGTAATGGCAGGTG+TGG - Chr1:77443933-77443952 MsG0180004396.01.T01:intron 40.0%
AACCGGAAGTCCAAAAGAAT+CGG + Chr1:77447893-77447912 None:intergenic 40.0%
AAGGAACGGGTAACCATATA+AGG - Chr1:77447216-77447235 MsG0180004396.01.T01:intron 40.0%
AATAAACGAGCAGCTGAAGA+TGG + Chr1:77440903-77440922 None:intergenic 40.0%
AATAAGGCTTCACTCATTGG+TGG + Chr1:77442652-77442671 None:intergenic 40.0%
AATCCTGCACCCATTTAAGT+AGG - Chr1:77449553-77449572 MsG0180004396.01.T01:intron 40.0%
AATGAGTCCCCATTAAGGAA+CGG - Chr1:77447202-77447221 MsG0180004396.01.T01:intron 40.0%
AATTGAACCTTAACGCTTCC+AGG + Chr1:77448080-77448099 None:intergenic 40.0%
ACAAGCTCAGGATACAAGTA+CGG - Chr1:77451426-77451445 MsG0180004396.01.T01:CDS 40.0%
ACAATGTTGGTCAAGCAAGT+CGG - Chr1:77454543-77454562 MsG0180004396.01.T01:intron 40.0%
ACATGAAAGGCTTGAAGTTG+GGG - Chr1:77442183-77442202 MsG0180004396.01.T01:intron 40.0%
ACATTTGTAATGGCAGGTGT+GGG - Chr1:77443934-77443953 MsG0180004396.01.T01:intron 40.0%
AGAACTTAATCGAGACTCCA+AGG - Chr1:77441928-77441947 MsG0180004396.01.T01:intron 40.0%
AGAAGAACAAGGGTGAGAAT+TGG - Chr1:77439729-77439748 MsG0180004396.01.T01:three_prime_UTR 40.0%
AGAAGTTCCATCATTTCCCA+TGG + Chr1:77449515-77449534 None:intergenic 40.0%
AGACTCAGCTAAACAGGATA+AGG + Chr1:77452033-77452052 None:intergenic 40.0%
AGAGTGGTCCTTGTTAAGTA+AGG + Chr1:77447151-77447170 None:intergenic 40.0%
AGCCTCTTGTGTAAAACATC+AGG - Chr1:77450811-77450830 MsG0180004396.01.T01:intron 40.0%
AGTGGGAGGAAGAAAAGAAA+TGG + Chr1:77454334-77454353 None:intergenic 40.0%
ATAAACATCTCACGCTACGT+GGG + Chr1:77450589-77450608 None:intergenic 40.0%
ATAAGGCTTCACTCATTGGT+GGG + Chr1:77442651-77442670 None:intergenic 40.0%
ATATGCTCGAAGTTGGAAAC+GGG - Chr1:77443330-77443349 MsG0180004396.01.T01:intron 40.0%
ATCAGTATCTACACCGGAAT+TGG - Chr1:77453201-77453220 MsG0180004396.01.T01:intron 40.0%
ATCTCCATGTCTTCAAGATC+GGG + Chr1:77454516-77454535 None:intergenic 40.0%
ATGAGAAATACAAGTCCCCT+GGG + Chr1:77450232-77450251 None:intergenic 40.0%
ATGAGAACGATATTCCTCTG+TGG + Chr1:77443363-77443382 None:intergenic 40.0%
ATGATGAACTCATGAACCAG+GGG - Chr1:77454677-77454696 MsG0180004396.01.T01:intron 40.0%
ATGGAAACCATGGGAAATGA+TGG - Chr1:77449505-77449524 MsG0180004396.01.T01:intron 40.0%
ATGGTTACCCGTTCCTTAAT+GGG + Chr1:77447213-77447232 None:intergenic 40.0%
ATTACCTTCCTGAGCACAAA+AGG + Chr1:77449179-77449198 None:intergenic 40.0%
ATTCACTCGTATAGGTCTAG+TGG - Chr1:77440605-77440624 MsG0180004396.01.T01:intron 40.0%
CAATCCTGGCTGTTACTATT+AGG - Chr1:77448232-77448251 MsG0180004396.01.T01:intron 40.0%
CACATGAAAGGCTTGAAGTT+GGG - Chr1:77442182-77442201 MsG0180004396.01.T01:intron 40.0%
CACTTCCAATAATCTTTGGG+AGG + Chr1:77440802-77440821 None:intergenic 40.0%
CATCTCCATGTCTTCAAGAT+CGG + Chr1:77454517-77454536 None:intergenic 40.0%
CCAAATACCAAGCTAACAAG+TGG + Chr1:77453994-77454013 None:intergenic 40.0%
CGGGATCTGCAAAATAAACA+TGG + Chr1:77449680-77449699 None:intergenic 40.0%
CGTTAGGAGCAATGAATGAA+TGG + Chr1:77444340-77444359 None:intergenic 40.0%
CTCATGCCTTCCTTAAAATG+CGG - Chr1:77451787-77451806 MsG0180004396.01.T01:intron 40.0%
CTGCCTCCAAAAATAAGTGA+CGG + Chr1:77451352-77451371 None:intergenic 40.0%
CTGGCATCTACTATAGTTTC+TGG + Chr1:77444058-77444077 None:intergenic 40.0%
GAAACAAGAGATGGAAACGA+AGG + Chr1:77440024-77440043 None:intergenic 40.0%
GAAGAACAAGGGTGAGAATT+GGG - Chr1:77439730-77439749 MsG0180004396.01.T01:three_prime_UTR 40.0%
GAGGCATATAGATTTCAACG+TGG - Chr1:77451100-77451119 MsG0180004396.01.T01:intron 40.0%
GATATGCTCGAAGTTGGAAA+CGG - Chr1:77443329-77443348 MsG0180004396.01.T01:intron 40.0%
GATCCATTAAATGAGTACGG+TGG - Chr1:77439970-77439989 MsG0180004396.01.T01:three_prime_UTR 40.0%
GCAGATAAACTTGGAGTTCA+AGG - Chr1:77443663-77443682 MsG0180004396.01.T01:intron 40.0%
GCCTCTTGTGTAAAACATCA+GGG - Chr1:77450812-77450831 MsG0180004396.01.T01:intron 40.0%
GGAAATAGTTGGAGAACAAC+AGG - Chr1:77442913-77442932 MsG0180004396.01.T01:intron 40.0%
GGAGCGACAAATAAAGGAAT+AGG - Chr1:77444457-77444476 MsG0180004396.01.T01:intron 40.0%
GGATTACGACAAAGAAGGTT+CGG - Chr1:77448990-77449009 MsG0180004396.01.T01:intron 40.0%
GGGTATAAAGTGGGATTATG+TGG - Chr1:77448769-77448788 MsG0180004396.01.T01:intron 40.0%
GTAATAAGAGAGATGGGACA+AGG - Chr1:77440198-77440217 MsG0180004396.01.T01:intron 40.0%
GTATATTGCTGTGACATCCT+TGG - Chr1:77453832-77453851 MsG0180004396.01.T01:intron 40.0%
GTATGACTGTTACTCGTTCA+CGG - Chr1:77450007-77450026 MsG0180004396.01.T01:intron 40.0%
GTATGAGAGTGATATCAAGG+TGG + Chr1:77450567-77450586 None:intergenic 40.0%
GTCTCAATGCAAGTTATCGT+GGG + Chr1:77442981-77443000 None:intergenic 40.0%
GTTAAGTAAGGACCTCTCAT+TGG + Chr1:77447139-77447158 None:intergenic 40.0%
GTTCTTAGAGAAGCAGCTAA+TGG - Chr1:77448258-77448277 MsG0180004396.01.T01:intron 40.0%
TAATTACCATTCCATCCTCC+AGG + Chr1:77443197-77443216 None:intergenic 40.0%
TACAGGTAAATTCTTCCCAG+GGG - Chr1:77450214-77450233 MsG0180004396.01.T01:intron 40.0%
TAGCTAATATCACGGGTTTG+TGG + Chr1:77449896-77449915 None:intergenic 40.0%
TATAGAAGTCATGCTGGGAA+TGG + Chr1:77443138-77443157 None:intergenic 40.0%
TATCCAGTAACATGATAGCC+TGG - Chr1:77450661-77450680 MsG0180004396.01.T01:intron 40.0%
TATGGTTACCCGTTCCTTAA+TGG + Chr1:77447214-77447233 None:intergenic 40.0%
TCAACTAACCTTCAGCTAGT+TGG - Chr1:77452813-77452832 MsG0180004396.01.T01:intron 40.0%
TCACATGAAAGGCTTGAAGT+TGG - Chr1:77442181-77442200 MsG0180004396.01.T01:intron 40.0%
TCACGTCAAAGTCGTGAAAA+TGG - Chr1:77453383-77453402 MsG0180004396.01.T01:CDS 40.0%
TCCATCCTCCCAAAGATTAT+TGG - Chr1:77440794-77440813 MsG0180004396.01.T01:intron 40.0%
TCTTCAGCTGCTCGTTTATT+AGG - Chr1:77440903-77440922 MsG0180004396.01.T01:intron 40.0%
TGAAACTCATGTGCTTCTTG+TGG - Chr1:77443636-77443655 MsG0180004396.01.T01:intron 40.0%
TGAGAGGTCCTTACTTAACA+AGG - Chr1:77447140-77447159 MsG0180004396.01.T01:intron 40.0%
TGGAATAGCTGGAACCATTT+CGG - Chr1:77441178-77441197 MsG0180004396.01.T01:intron 40.0%
TGGGGATTTATTCAGATGCT+GGG - Chr1:77442201-77442220 MsG0180004396.01.T01:intron 40.0%
TGGGTATGAGAGTGATATCA+AGG + Chr1:77450570-77450589 None:intergenic 40.0%
TGTAACGTTGGGTCCATTTA+AGG - Chr1:77447719-77447738 MsG0180004396.01.T01:intron 40.0%
TGTATAACGAACCCGGTTTA+GGG + Chr1:77447870-77447889 None:intergenic 40.0%
TGTCTCAATGCAAGTTATCG+TGG + Chr1:77442982-77443001 None:intergenic 40.0%
TGTTTCAGACTCAGCTAAAC+AGG + Chr1:77452039-77452058 None:intergenic 40.0%
TGTTTCATGCACCTTAGCTA+GGG + Chr1:77443399-77443418 None:intergenic 40.0%
TTAGCCCATATCCTCCTTAT+TGG - Chr1:77449741-77449760 MsG0180004396.01.T01:intron 40.0%
TTAGGGAAATATGGTTCCCA+AGG - Chr1:77442115-77442134 MsG0180004396.01.T01:intron 40.0%
TTGAAAGAAACGGTGGATCA+AGG - Chr1:77439684-77439703 MsG0180004396.01.T01:three_prime_UTR 40.0%
TTGGAGTTTGGACAGTTACA+TGG + Chr1:77452854-77452873 None:intergenic 40.0%
TTGGGGATTTATTCAGATGC+TGG - Chr1:77442200-77442219 MsG0180004396.01.T01:intron 40.0%
TTGTCTTTCGTAGGATGTCT+GGG - Chr1:77449381-77449400 MsG0180004396.01.T01:intron 40.0%
TTGTTTCATGCACCTTAGCT+AGG + Chr1:77443400-77443419 None:intergenic 40.0%
TTTATTTGTCGCTCTCCGTT+AGG + Chr1:77444356-77444375 None:intergenic 40.0%
TTTCCAACTTCGAGCATATC+AGG + Chr1:77443329-77443348 None:intergenic 40.0%
TTTCCTACTTAAATGGGTGC+AGG + Chr1:77449559-77449578 None:intergenic 40.0%
TTTGTCTTTCGTAGGATGTC+TGG - Chr1:77449380-77449399 MsG0180004396.01.T01:intron 40.0%
! AAGCAAAGGTGCATCTGTTT+AGG - Chr1:77440377-77440396 MsG0180004396.01.T01:intron 40.0%
! ACCCTGATGTTTTACACAAG+AGG + Chr1:77450816-77450835 None:intergenic 40.0%
! AGAGAGTGTGTGTGAATATG+AGG + Chr1:77442738-77442757 None:intergenic 40.0%
! AGGTGTGTTTGATTTCTGTG+GGG - Chr1:77449868-77449887 MsG0180004396.01.T01:intron 40.0%
! ATTAGAGCATCTCCAATGAG+AGG - Chr1:77447124-77447143 MsG0180004396.01.T01:intron 40.0%
! ATTTGGGGTGTAATGCAATC+CGG - Chr1:77454008-77454027 MsG0180004396.01.T01:intron 40.0%
! CAGGTGTGTTTGATTTCTGT+GGG - Chr1:77449867-77449886 MsG0180004396.01.T01:intron 40.0%
! CCAAAAGTGTGGGAAATAGT+TGG - Chr1:77442902-77442921 MsG0180004396.01.T01:intron 40.0%
! CCAACTATTTCCCACACTTT+TGG + Chr1:77442905-77442924 None:intergenic 40.0%
! CCACTTGTTAGCTTGGTATT+TGG - Chr1:77453991-77454010 MsG0180004396.01.T01:intron 40.0%
! CTTCAATTCCTCGAAAGCAT+GGG - Chr1:77450037-77450056 MsG0180004396.01.T01:intron 40.0%
! GATTCATCACGTGCTTGTTA+TGG - Chr1:77453446-77453465 MsG0180004396.01.T01:intron 40.0%
! TCAGGTGTGTTTGATTTCTG+TGG - Chr1:77449866-77449885 MsG0180004396.01.T01:intron 40.0%
! TCCAATAATCTTTGGGAGGA+TGG + Chr1:77440798-77440817 None:intergenic 40.0%
! TCTTCAGGTTCGAATTCTGA+AGG - Chr1:77452076-77452095 MsG0180004396.01.T01:CDS 40.0%
! TGGTCTATCCCATTGATTGA+AGG - Chr1:77453085-77453104 MsG0180004396.01.T01:intron 40.0%
! TGTCTGGGATTCTTATGCTT+TGG - Chr1:77449396-77449415 MsG0180004396.01.T01:intron 40.0%
! TTTGACTACTTGCTGCAGAT+AGG - Chr1:77449119-77449138 MsG0180004396.01.T01:intron 40.0%
! TTTTCATCCATGCATGTCTC+TGG - Chr1:77454180-77454199 MsG0180004396.01.T01:intron 40.0%
!! ACCTGTTTTAGGCATTCTTG+AGG - Chr1:77451081-77451100 MsG0180004396.01.T01:intron 40.0%
!! ATGTGGTAGTGGGTATAAAG+TGG - Chr1:77448759-77448778 MsG0180004396.01.T01:intron 40.0%
!! GGAGATGTAATGGACAATGT+TGG - Chr1:77454530-77454549 MsG0180004396.01.T01:intron 40.0%
!! GTAACTTGGGTTCTAAACAC+TGG + Chr1:77452459-77452478 None:intergenic 40.0%
!! TCACTATAAGCTGATTTGGG+TGG - Chr1:77450506-77450525 MsG0180004396.01.T01:intron 40.0%
!! TGTGGTAGTGGGTATAAAGT+GGG - Chr1:77448760-77448779 MsG0180004396.01.T01:intron 40.0%
!! TTACCATTACCCTGTTTTGG+GGG + Chr1:77450744-77450763 None:intergenic 40.0%
!!! GTTTTTTGGATGGACTTTGC+TGG - Chr1:77451845-77451864 MsG0180004396.01.T01:intron 40.0%
!!! TCACCGTCACTTATTTTTGG+AGG - Chr1:77451346-77451365 MsG0180004396.01.T01:intron 40.0%
AACGTTTCCGTCAGGAATCA+AGG - Chr1:77442142-77442161 MsG0180004396.01.T01:intron 45.0%
AAGGTGGATATTTGTGCTCC+TGG - Chr1:77454777-77454796 MsG0180004396.01.T01:intron 45.0%
ACAAGGACCACTCTCTGTTA+AGG - Chr1:77447157-77447176 MsG0180004396.01.T01:intron 45.0%
ACGGTGAACTGATCCTGTAA+CGG + Chr1:77451333-77451352 None:intergenic 45.0%
ACTCTCACACTTCCCTAAAC+CGG - Chr1:77447855-77447874 MsG0180004396.01.T01:intron 45.0%
ACTTGTAGTAAACGCATGCC+TGG - Chr1:77442312-77442331 MsG0180004396.01.T01:intron 45.0%
ACTTTATACTACAAGCCCCC+TGG + Chr1:77454696-77454715 None:intergenic 45.0%
AGACACACATGCTCAGTACA+TGG + Chr1:77450623-77450642 None:intergenic 45.0%
AGAGATGGAAACGAAGGAAG+AGG + Chr1:77440018-77440037 None:intergenic 45.0%
AGATACTAAGGCAGCACAAG+AGG - Chr1:77451963-77451982 MsG0180004396.01.T01:intron 45.0%
AGATGCCAGAGATTTATGGG+AGG - Chr1:77444069-77444088 MsG0180004396.01.T01:intron 45.0%
AGGTGGATATTTGTGCTCCT+GGG - Chr1:77454778-77454797 MsG0180004396.01.T01:intron 45.0%
AGTGTCAAATCCGGTTGAAC+CGG - Chr1:77447932-77447951 MsG0180004396.01.T01:intron 45.0%
ATAATCCTCATCTGGTTGGC+TGG - Chr1:77449643-77449662 MsG0180004396.01.T01:intron 45.0%
ATGAGCTACGTTTGTGAGTC+AGG - Chr1:77440173-77440192 MsG0180004396.01.T01:intron 45.0%
ATGAGTCCCCATTAAGGAAC+GGG - Chr1:77447203-77447222 MsG0180004396.01.T01:intron 45.0%
CAAACATAAACAGTGGGACG+TGG - Chr1:77446642-77446661 MsG0180004396.01.T01:intron 45.0%
CAGCATCCCTAACGAAAAGT+GGG + Chr1:77454351-77454370 None:intergenic 45.0%
CATAAACATCTCACGCTACG+TGG + Chr1:77450590-77450609 None:intergenic 45.0%
CATCCAGGCTATCATGTTAC+TGG + Chr1:77450667-77450686 None:intergenic 45.0%
CATGAGAAATACAAGTCCCC+TGG + Chr1:77450233-77450252 None:intergenic 45.0%
CCTCTCTCCTAGGCAATTAA+CGG - Chr1:77447243-77447262 MsG0180004396.01.T01:intron 45.0%
CCTGGCTGTTACTATTAGGA+AGG - Chr1:77448236-77448255 MsG0180004396.01.T01:intron 45.0%
CCTTCCTAATAGTAACAGCC+AGG + Chr1:77448239-77448258 None:intergenic 45.0%
CGAAAAGACTTTGTGCGCAA+TGG - Chr1:77448053-77448072 MsG0180004396.01.T01:intron 45.0%
CGTTAATTGCCTAGGAGAGA+GGG + Chr1:77447245-77447264 None:intergenic 45.0%
CTCTCATAACCAGCAATAGC+AGG + Chr1:77450063-77450082 None:intergenic 45.0%
CTCTCTCCTAGGCAATTAAC+GGG - Chr1:77447244-77447263 MsG0180004396.01.T01:intron 45.0%
CTGGGATTCTTATGCTTTGG+AGG - Chr1:77449399-77449418 MsG0180004396.01.T01:intron 45.0%
CTTAGAGAAGCAGCTAATGG+TGG - Chr1:77448261-77448280 MsG0180004396.01.T01:intron 45.0%
GAAGCCATATCCATTCTCCT+AGG - Chr1:77453271-77453290 MsG0180004396.01.T01:intron 45.0%
GAATCGGTGTATAACGAACC+CGG + Chr1:77447877-77447896 None:intergenic 45.0%
GACACACATGCTCAGTACAT+GGG + Chr1:77450622-77450641 None:intergenic 45.0%
GATAACCGATAGCATACCAG+AGG + Chr1:77449437-77449456 None:intergenic 45.0%
GATCCTGATATGCTCGAAGT+TGG - Chr1:77443323-77443342 MsG0180004396.01.T01:intron 45.0%
GATGTCCGAATACGTAGTAC+AGG + Chr1:77445472-77445491 None:intergenic 45.0%
GCAAGTGAATCTATGACTGC+TGG + Chr1:77451821-77451840 None:intergenic 45.0%
GCCTCAAGAATGCCTAAAAC+AGG + Chr1:77451085-77451104 None:intergenic 45.0%
GCTTCAATTCCTCGAAAGCA+TGG - Chr1:77450036-77450055 MsG0180004396.01.T01:intron 45.0%
GGAATGCAGATATACCAACC+AGG - Chr1:77454100-77454119 MsG0180004396.01.T01:intron 45.0%
GGGGATTGAGAAACAAGAGA+TGG + Chr1:77440033-77440052 None:intergenic 45.0%
GGTATAACATACCCCATTGG+AGG + Chr1:77441008-77441027 None:intergenic 45.0%
GTGGCATTGCTGCAATTCTT+CGG - Chr1:77454481-77454500 MsG0180004396.01.T01:intron 45.0%
GTGTATAACGAACCCGGTTT+AGG + Chr1:77447871-77447890 None:intergenic 45.0%
GTTAATTGCCTAGGAGAGAG+GGG + Chr1:77447244-77447263 None:intergenic 45.0%
GTTGTTGTCACGTGACTGAA+AGG - Chr1:77450765-77450784 MsG0180004396.01.T01:intron 45.0%
TAATCGCGTCTCTTCACTCA+CGG + Chr1:77440283-77440302 None:intergenic 45.0%
TACCAAGCTAACAAGTGGGA+TGG + Chr1:77453989-77454008 None:intergenic 45.0%
TATGCTCGAAGTTGGAAACG+GGG - Chr1:77443331-77443350 MsG0180004396.01.T01:intron 45.0%
TCATGCGGATCCACTAATCA+TGG + Chr1:77453692-77453711 None:intergenic 45.0%
TCTCACCTCCCATAAATCTC+TGG + Chr1:77444077-77444096 None:intergenic 45.0%
TCTCCATGTCTTCAAGATCG+GGG + Chr1:77454515-77454534 None:intergenic 45.0%
TGATGAACTCATGAACCAGG+GGG - Chr1:77454678-77454697 MsG0180004396.01.T01:intron 45.0%
TGCTGTGACATCCTTGGAAA+TGG - Chr1:77453838-77453857 MsG0180004396.01.T01:intron 45.0%
TGGTTACCCGTTCCTTAATG+GGG + Chr1:77447212-77447231 None:intergenic 45.0%
TGTGCTGTAATTGCAAGTCC+TGG - Chr1:77451128-77451147 MsG0180004396.01.T01:intron 45.0%
TGTTAAGGACCTCCCATTGA+AGG - Chr1:77447172-77447191 MsG0180004396.01.T01:intron 45.0%
TGTTGTTACAACCGTCTCTC+AGG - Chr1:77454619-77454638 MsG0180004396.01.T01:intron 45.0%
TTAATTGCCTAGGAGAGAGG+GGG + Chr1:77447243-77447262 None:intergenic 45.0%
TTGAAGTAGTTCCCTTGCAC+TGG + Chr1:77452538-77452557 None:intergenic 45.0%
! ATGTGTACCCTAAGGCACTA+AGG + Chr1:77441364-77441383 None:intergenic 45.0%
! GAGGGTATAACATACCCCAT+TGG + Chr1:77441011-77441030 None:intergenic 45.0%
! GGATTCTGCTGACCTGTTTT+AGG - Chr1:77451070-77451089 MsG0180004396.01.T01:intron 45.0%
! GGTGTGGATTACGACAAAGA+AGG - Chr1:77448985-77449004 MsG0180004396.01.T01:intron 45.0%
! GTGTGAATGGTGAGTTGAAC+TGG - Chr1:77442702-77442721 MsG0180004396.01.T01:intron 45.0%
!! CTTCCTCCCACTTTTCGTTA+GGG - Chr1:77454342-77454361 MsG0180004396.01.T01:intron 45.0%
!! GGTGGCTCTAGATCTAAGTT+GGG - Chr1:77450524-77450543 MsG0180004396.01.T01:CDS 45.0%
!! TCTTCCTCCCACTTTTCGTT+AGG - Chr1:77454341-77454360 MsG0180004396.01.T01:intron 45.0%
!! TTTTGGATGGACTTTGCTGG+TGG - Chr1:77451848-77451867 MsG0180004396.01.T01:intron 45.0%
!!! CACCGATTCTTTTGGACTTC+CGG - Chr1:77447888-77447907 MsG0180004396.01.T01:intron 45.0%
!!! GAATATTTTTCGGGTGGGAC+AGG - Chr1:77453424-77453443 MsG0180004396.01.T01:intron 45.0%
!!! TCTTTTTTGGTTCCAGGGTG+TGG - Chr1:77448969-77448988 MsG0180004396.01.T01:intron 45.0%
!! AAATATTAAAACAATAATAT+GGG + Chr1:77446083-77446102 None:intergenic 5.0%
!! AACTATTAATTATTATAATA+TGG + Chr1:77447327-77447346 None:intergenic 5.0%
!! TAAATAAAAATAAAAAAACA+TGG + Chr1:77445862-77445881 None:intergenic 5.0%
!! TAAATATTAAAACAATAATA+TGG + Chr1:77446084-77446103 None:intergenic 5.0%
!! TTTAATAAAAATACTTAATA+AGG + Chr1:77447680-77447699 None:intergenic 5.0%
!! TTTATACTTAAATATTTAAT+TGG + Chr1:77448626-77448645 None:intergenic 5.0%
!!! ATATATATTTTTTTTTTGTA+GGG + Chr1:77440053-77440072 None:intergenic 5.0%
!!! ATATTTTTTATCAAAATTTT+TGG + Chr1:77447068-77447087 None:intergenic 5.0%
!!! ATTATTGTTTTAATATTTAT+CGG - Chr1:77446085-77446104 MsG0180004396.01.T01:intron 5.0%
!!! TATATATATTTTTTTTTTGT+AGG + Chr1:77440054-77440073 None:intergenic 5.0%
!!! TATATTTTTTTTTTGTAATT+TGG + Chr1:77441684-77441703 None:intergenic 5.0%
!!! TTGTTTTTTTTTATATTTAT+AGG - Chr1:77445966-77445985 MsG0180004396.01.T01:intron 5.0%
AAACGAGCAGCTGAAGATGG+TGG + Chr1:77440900-77440919 None:intergenic 50.0%
AACCGGATTTGACACTGGTC+CGG + Chr1:77447928-77447947 None:intergenic 50.0%
AAGGCTTCAACGTTTCCGTC+AGG - Chr1:77442134-77442153 MsG0180004396.01.T01:intron 50.0%
ACAGCCAGGATTGAATCACC+AGG + Chr1:77448225-77448244 None:intergenic 50.0%
ACATAGGGGATGGGAAGATC+CGG - Chr1:77442870-77442889 MsG0180004396.01.T01:intron 50.0%
ACGTTCTCCAGAGACATGCA+TGG + Chr1:77454190-77454209 None:intergenic 50.0%
ACTGCATCCTGGTCAGACAT+AGG - Chr1:77444025-77444044 MsG0180004396.01.T01:intron 50.0%
ACTTGGTCAGACACCTCCAA+TGG - Chr1:77440992-77441011 MsG0180004396.01.T01:intron 50.0%
AGCTAGATCAGCACTTGCAG+CGG + Chr1:77449700-77449719 None:intergenic 50.0%
AGCTCCTGGTGATTCAATCC+TGG - Chr1:77448218-77448237 MsG0180004396.01.T01:intron 50.0%
ATGCAACAGTGACTGCATCC+TGG - Chr1:77444014-77444033 MsG0180004396.01.T01:intron 50.0%
ATGCTCGAAGTTGGAAACGG+GGG - Chr1:77443332-77443351 MsG0180004396.01.T01:intron 50.0%
ATGGGAAGATCCGGCAACAT+GGG - Chr1:77442879-77442898 MsG0180004396.01.T01:intron 50.0%
ATGTCTTCAAGATCGGGGAG+AGG + Chr1:77454510-77454529 None:intergenic 50.0%
ATTCTCACGCACACAAGCTC+AGG - Chr1:77451414-77451433 MsG0180004396.01.T01:CDS 50.0%
CATCCCTAACGAAAAGTGGG+AGG + Chr1:77454348-77454367 None:intergenic 50.0%
CCGAATACGTAGTACAGGTG+CGG + Chr1:77445467-77445486 None:intergenic 50.0%
CCGCACCTGTACTACGTATT+CGG - Chr1:77445464-77445483 MsG0180004396.01.T01:intron 50.0%
CCGTTAATTGCCTAGGAGAG+AGG + Chr1:77447246-77447265 None:intergenic 50.0%
CGAATACGTAGTACAGGTGC+GGG + Chr1:77445466-77445485 None:intergenic 50.0%
CGAGGAAGAGGAAGAAGCAA+AGG - Chr1:77440363-77440382 MsG0180004396.01.T01:intron 50.0%
CTCGCGAATGTTTCACGAAC+AGG + Chr1:77446139-77446158 None:intergenic 50.0%
CTCTCACACTTCCCTAAACC+GGG - Chr1:77447856-77447875 MsG0180004396.01.T01:intron 50.0%
CTTGGTCAGACACCTCCAAT+GGG - Chr1:77440993-77441012 MsG0180004396.01.T01:intron 50.0%
CTTTGTCGTAATCCACACCC+TGG + Chr1:77448984-77449003 None:intergenic 50.0%
GAAAACTGATCTGGACCAGC+CGG + Chr1:77447954-77447973 None:intergenic 50.0%
GACAAATGGGCATCTTACGC+TGG - Chr1:77443170-77443189 MsG0180004396.01.T01:intron 50.0%
GACGGAAACGTTGAAGCCTT+GGG + Chr1:77442134-77442153 None:intergenic 50.0%
GATCCCCCAAAACAGGGTAA+TGG - Chr1:77450738-77450757 MsG0180004396.01.T01:intron 50.0%
GATGGAAACGAAGGAAGAGG+TGG + Chr1:77440015-77440034 None:intergenic 50.0%
GCAGCATCCCTAACGAAAAG+TGG + Chr1:77454352-77454371 None:intergenic 50.0%
GCTAGAGCCTTGATTCCTGA+CGG + Chr1:77442152-77442171 None:intergenic 50.0%
GCTGAATGCCAACTAGCTGA+AGG + Chr1:77452824-77452843 None:intergenic 50.0%
GGTTCAACCGGATTTGACAC+TGG + Chr1:77447933-77447952 None:intergenic 50.0%
GTAGTAGGGTTGTCAGTGTC+AGG - Chr1:77449848-77449867 MsG0180004396.01.T01:intron 50.0%
GTCACGTGACTGAAAGGTCA+CGG - Chr1:77450771-77450790 MsG0180004396.01.T01:intron 50.0%
TAGCATTTGGGCCCTAGCTA+AGG - Chr1:77443385-77443404 MsG0180004396.01.T01:intron 50.0%
TCACGTGACTGAAAGGTCAC+GGG - Chr1:77450772-77450791 MsG0180004396.01.T01:intron 50.0%
TCAGGACTCCTAGGCAAGTT+GGG - Chr1:77454637-77454656 MsG0180004396.01.T01:intron 50.0%
TCTCCCCGATCTTGAAGACA+TGG - Chr1:77454509-77454528 MsG0180004396.01.T01:intron 50.0%
TCTCTCTCTCTCTCCACTCA+CGG + Chr1:77440311-77440330 None:intergenic 50.0%
TGACGGAAACGTTGAAGCCT+TGG + Chr1:77442135-77442154 None:intergenic 50.0%
TGAGTGGAGAGAGAGAGAGA+CGG - Chr1:77440311-77440330 MsG0180004396.01.T01:intron 50.0%
TGCGGATCCACTAATCATGG+AGG + Chr1:77453689-77453708 None:intergenic 50.0%
TTGCACAGCTAGGCGTTCAT+GGG + Chr1:77453492-77453511 None:intergenic 50.0%
TTGGTCAAGCAAGTCGGTGT+TGG - Chr1:77454549-77454568 MsG0180004396.01.T01:intron 50.0%
TTGGTCAGACACCTCCAATG+GGG - Chr1:77440994-77441013 MsG0180004396.01.T01:intron 50.0%
TTTCAGGCCTATGTCTGACC+AGG + Chr1:77444035-77444054 None:intergenic 50.0%
TTTCCCCTTCACCAGTGCAA+GGG - Chr1:77452524-77452543 MsG0180004396.01.T01:intron 50.0%
TTTGCACAGCTAGGCGTTCA+TGG + Chr1:77453493-77453512 None:intergenic 50.0%
! AAAATGATGGGACCCCTTCC+TGG - Chr1:77450857-77450876 MsG0180004396.01.T01:intron 50.0%
! ACACTTTTGGCCCATGTTGC+CGG + Chr1:77442892-77442911 None:intergenic 50.0%
! AGTTCCCTTGCACTGGTGAA+GGG + Chr1:77452531-77452550 None:intergenic 50.0%
! GCAACATGGGCCAAAAGTGT+GGG - Chr1:77442892-77442911 MsG0180004396.01.T01:intron 50.0%
! GCTGATGCAATGGTGTCAAC+TGG - Chr1:77441338-77441357 MsG0180004396.01.T01:intron 50.0%
! GGTTTAGGGAAGTGTGAGAG+TGG + Chr1:77447856-77447875 None:intergenic 50.0%
! GTTCGGTTTTGCGTGTTCGA+GGG - Chr1:77449007-77449026 MsG0180004396.01.T01:intron 50.0%
! TAGGGAAGTGTGAGAGTGGA+GGG + Chr1:77447852-77447871 None:intergenic 50.0%
! TAGTTCCCTTGCACTGGTGA+AGG + Chr1:77452532-77452551 None:intergenic 50.0%
! TGATACACAGATGGTGCCAG+TGG - Chr1:77448161-77448180 MsG0180004396.01.T01:intron 50.0%
! TGCCATCCCACTTGTTAGCT+TGG - Chr1:77453984-77454003 MsG0180004396.01.T01:intron 50.0%
! TTAGGGAAGTGTGAGAGTGG+AGG + Chr1:77447853-77447872 None:intergenic 50.0%
! TTTTCCCCTTCACCAGTGCA+AGG - Chr1:77452523-77452542 MsG0180004396.01.T01:intron 50.0%
!! CAACTGGCCTTAGTGCCTTA+GGG - Chr1:77441354-77441373 MsG0180004396.01.T01:intron 50.0%
!! CAATGGACCTGGAAGCGTTA+AGG - Chr1:77448070-77448089 MsG0180004396.01.T01:intron 50.0%
!! GCTGTGGTGTTGATGCAAGA+AGG - Chr1:77449717-77449736 MsG0180004396.01.T01:intron 50.0%
!! GGGTGGCTCTAGATCTAAGT+TGG - Chr1:77450523-77450542 MsG0180004396.01.T01:CDS 50.0%
!! TCAACTGGCCTTAGTGCCTT+AGG - Chr1:77441353-77441372 MsG0180004396.01.T01:intron 50.0%
!! TGAGAAGCGTTTGCACAGCT+AGG + Chr1:77453502-77453521 None:intergenic 50.0%
!! TGCAAGTGCTGATCTAGCTG+TGG - Chr1:77449701-77449720 MsG0180004396.01.T01:intron 50.0%
AAAGCCATCAAAGGGCAGCC+CGG + Chr1:77450911-77450930 None:intergenic 55.0%
AACCGTCTCTCAGGACTCCT+AGG - Chr1:77454628-77454647 MsG0180004396.01.T01:intron 55.0%
AAGCATGGGCCTGCTATTGC+TGG - Chr1:77450051-77450070 MsG0180004396.01.T01:intron 55.0%
ACTAAAGCTCCCGCATACGC+AGG + Chr1:77450885-77450904 None:intergenic 55.0%
ACTCAGCACCCAACTTGCCT+AGG + Chr1:77454648-77454667 None:intergenic 55.0%
AGAGACGGTGGAAGATGGAG+AGG - Chr1:77440326-77440345 MsG0180004396.01.T01:intron 55.0%
AGGAGGGATCCCCCAAAACA+GGG - Chr1:77450732-77450751 MsG0180004396.01.T01:intron 55.0%
AGTGGGGCCTCCATGATTAG+TGG - Chr1:77453679-77453698 MsG0180004396.01.T01:CDS 55.0%
ATAAGGACCCCCTCTCTCCT+AGG - Chr1:77447233-77447252 MsG0180004396.01.T01:intron 55.0%
ATAGCAGGCCCATGCTTTCG+AGG + Chr1:77450048-77450067 None:intergenic 55.0%
ATAGCATACCAGAGGCCTGC+TGG + Chr1:77449429-77449448 None:intergenic 55.0%
ATGCCGTGAATGGAGAGACG+CGG - Chr1:77440221-77440240 MsG0180004396.01.T01:intron 55.0%
CAACCGCGGATATCCACTCA+CGG + Chr1:77440255-77440274 None:intergenic 55.0%
CAACCGCGTCTCTCCATTCA+CGG + Chr1:77440227-77440246 None:intergenic 55.0%
CTAAAGCTCCCGCATACGCA+GGG + Chr1:77450884-77450903 None:intergenic 55.0%
CTCAGGACTCCTAGGCAAGT+TGG - Chr1:77454636-77454655 MsG0180004396.01.T01:intron 55.0%
GACTTTGTGCGCAATGGACC+TGG - Chr1:77448059-77448078 MsG0180004396.01.T01:intron 55.0%
GAGACACGACATCGTCATCC+AGG + Chr1:77450682-77450701 None:intergenic 55.0%
GAGAGAGAGACGGTGGAAGA+TGG - Chr1:77440321-77440340 MsG0180004396.01.T01:intron 55.0%
GAGGGACAAAGACGAGGAAG+AGG - Chr1:77440351-77440370 MsG0180004396.01.T01:intron 55.0%
GATGGGAAGATCCGGCAACA+TGG - Chr1:77442878-77442897 MsG0180004396.01.T01:intron 55.0%
GATTTGACACTGGTCCGGAC+AGG + Chr1:77447923-77447942 None:intergenic 55.0%
GCAGGCCTCTGGTATGCTAT+CGG - Chr1:77449429-77449448 MsG0180004396.01.T01:intron 55.0%
GCTAGATCAGCACTTGCAGC+GGG + Chr1:77449699-77449718 None:intergenic 55.0%
GGAGAGAGGGGGTCCTTATA+TGG + Chr1:77447232-77447251 None:intergenic 55.0%
GGCAACATGGGCCAAAAGTG+TGG - Chr1:77442891-77442910 MsG0180004396.01.T01:intron 55.0%
GGGAGGTCCTTAACAGAGAG+TGG + Chr1:77447167-77447186 None:intergenic 55.0%
GTCCGGACCAGTGTCAAATC+CGG - Chr1:77447923-77447942 MsG0180004396.01.T01:intron 55.0%
GTGGAAGATGGAGAGGCAGA+GGG - Chr1:77440333-77440352 MsG0180004396.01.T01:intron 55.0%
GTGGGACCCGTTAATTGCCT+AGG + Chr1:77447253-77447272 None:intergenic 55.0%
GTTCACCAGCCAACCAGATG+AGG + Chr1:77449651-77449670 None:intergenic 55.0%
TCAAATCCGGTTGAACCGGC+TGG - Chr1:77447936-77447955 MsG0180004396.01.T01:intron 55.0%
TGCCTAGGAGTCCTGAGAGA+CGG + Chr1:77454633-77454652 None:intergenic 55.0%
TGGAGCAATGGCTAGGGTGA+TGG - Chr1:77440830-77440849 MsG0180004396.01.T01:intron 55.0%
TGGGACAAGGATGCCGTGAA+TGG - Chr1:77440211-77440230 MsG0180004396.01.T01:intron 55.0%
TTGTAATGGCAGGTGTGGGC+AGG - Chr1:77443938-77443957 MsG0180004396.01.T01:intron 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG - Chr1:77450889-77450908 MsG0180004396.01.T01:intron 55.0%
! GTTCCCTTGCACTGGTGAAG+GGG + Chr1:77452530-77452549 None:intergenic 55.0%
! TACAGCGGCCTTTTGTGCTC+AGG - Chr1:77449168-77449187 MsG0180004396.01.T01:intron 55.0%
!! GGTTCGGTTTTGCGTGTTCG+AGG - Chr1:77449006-77449025 MsG0180004396.01.T01:intron 55.0%
!! TGCTTTGGAGGTACTCCAGC+AGG - Chr1:77449411-77449430 MsG0180004396.01.T01:intron 55.0%
CATACGCAGGGTCCAGGAAG+GGG + Chr1:77450872-77450891 None:intergenic 60.0%
CTCTCTCTCTCCACTCACGG+CGG + Chr1:77440308-77440327 None:intergenic 60.0%
CTTACGCTGGACCTGGAGGA+TGG - Chr1:77443183-77443202 MsG0180004396.01.T01:intron 60.0%
CTTCCTGGACCCTGCGTATG+CGG - Chr1:77450872-77450891 MsG0180004396.01.T01:intron 60.0%
GAGGAGGGATCCCCCAAAAC+AGG - Chr1:77450731-77450750 MsG0180004396.01.T01:intron 60.0%
GAGGCAGAGGGACAAAGACG+AGG - Chr1:77440345-77440364 MsG0180004396.01.T01:intron 60.0%
GCATACGCAGGGTCCAGGAA+GGG + Chr1:77450873-77450892 None:intergenic 60.0%
GCATCTTACGCTGGACCTGG+AGG - Chr1:77443179-77443198 MsG0180004396.01.T01:intron 60.0%
GCTGGACCTGGAGGATGGAA+TGG - Chr1:77443188-77443207 MsG0180004396.01.T01:intron 60.0%
GGTGGAAGATGGAGAGGCAG+AGG - Chr1:77440332-77440351 MsG0180004396.01.T01:intron 60.0%
GTGGAGAGAGAGAGAGACGG+TGG - Chr1:77440314-77440333 MsG0180004396.01.T01:intron 60.0%
TCCGGACAGGCACGGAAAAC+CGG + Chr1:77447910-77447929 None:intergenic 60.0%
TCGCGTCTCTTCACTCACGG+CGG + Chr1:77440280-77440299 None:intergenic 60.0%
TGGGCATCTTACGCTGGACC+TGG - Chr1:77443176-77443195 MsG0180004396.01.T01:intron 60.0%
TTCCTGGACCCTGCGTATGC+GGG - Chr1:77450873-77450892 MsG0180004396.01.T01:intron 60.0%
! AAACGGGGGCATGACCACAG+AGG - Chr1:77443346-77443365 MsG0180004396.01.T01:intron 60.0%
! GCGGCCTTTTGTGCTCAGGA+AGG - Chr1:77449172-77449191 MsG0180004396.01.T01:intron 60.0%
! TCCGGTTTTCCGTGCCTGTC+CGG - Chr1:77447906-77447925 MsG0180004396.01.T01:intron 60.0%
! TCTGGACCAGCCGGTTCAAC+CGG + Chr1:77447945-77447964 None:intergenic 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG - Chr1:77450890-77450909 MsG0180004396.01.T01:intron 60.0%
CCGCCGTGAGTGGATATCCG+CGG - Chr1:77440249-77440268 MsG0180004396.01.T01:intron 65.0%
CCGCGGATATCCACTCACGG+CGG + Chr1:77440252-77440271 None:intergenic 65.0%
CGCATACGCAGGGTCCAGGA+AGG + Chr1:77450874-77450893 None:intergenic 65.0%
GACACTGGTCCGGACAGGCA+CGG + Chr1:77447918-77447937 None:intergenic 65.0%
TGCACCGGGCTGCCCTTTGA+TGG - Chr1:77450904-77450923 MsG0180004396.01.T01:intron 65.0%
! GAGGTACTCCAGCAGGCCTC+TGG - Chr1:77449418-77449437 MsG0180004396.01.T01:intron 65.0%
CGCGATTACGCCGCCGTGAG+TGG - Chr1:77440295-77440314 MsG0180004396.01.T01:intron 70.0%
CTCCCGCATACGCAGGGTCC+AGG + Chr1:77450878-77450897 None:intergenic 70.0%
CACTCACGGCGGCGCAACCG+CGG + Chr1:77440241-77440260 None:intergenic 75.0%
! CGCGGTTGCGCCGCCGTGAG+TGG - Chr1:77440239-77440258 MsG0180004396.01.T01:intron 80.0%
Chromosome Type Strat End Strand Name
Chr1 gene 77439668 77454940 77439668 ID=MsG0180004396.01;Name=MsG0180004396.01
Chr1 mRNA 77439668 77454940 77439668 ID=MsG0180004396.01.T01;Parent=MsG0180004396.01;Name=MsG0180004396.01.T01;_AED=0.39;_eAED=0.39;_QI=0|0.34|0.37|0.95|0.78|0.75|24|401|676
Chr1 exon 77439668 77440142 77439668 ID=MsG0180004396.01.T01:exon:45131;Parent=MsG0180004396.01.T01
Chr1 exon 77440401 77440507 77440401 ID=MsG0180004396.01.T01:exon:45130;Parent=MsG0180004396.01.T01
Chr1 exon 77441068 77441162 77441068 ID=MsG0180004396.01.T01:exon:45129;Parent=MsG0180004396.01.T01
Chr1 exon 77442487 77442525 77442487 ID=MsG0180004396.01.T01:exon:45128;Parent=MsG0180004396.01.T01
Chr1 exon 77442624 77442712 77442624 ID=MsG0180004396.01.T01:exon:45127;Parent=MsG0180004396.01.T01
Chr1 exon 77444390 77444420 77444390 ID=MsG0180004396.01.T01:exon:45126;Parent=MsG0180004396.01.T01
Chr1 exon 77444525 77444600 77444525 ID=MsG0180004396.01.T01:exon:45125;Parent=MsG0180004396.01.T01
Chr1 exon 77444839 77444914 77444839 ID=MsG0180004396.01.T01:exon:45124;Parent=MsG0180004396.01.T01
Chr1 exon 77445169 77445214 77445169 ID=MsG0180004396.01.T01:exon:45123;Parent=MsG0180004396.01.T01
Chr1 exon 77445546 77445623 77445546 ID=MsG0180004396.01.T01:exon:45122;Parent=MsG0180004396.01.T01
Chr1 exon 77446276 77446437 77446276 ID=MsG0180004396.01.T01:exon:45121;Parent=MsG0180004396.01.T01
Chr1 exon 77450518 77450658 77450518 ID=MsG0180004396.01.T01:exon:45120;Parent=MsG0180004396.01.T01
Chr1 exon 77451202 77451284 77451202 ID=MsG0180004396.01.T01:exon:45119;Parent=MsG0180004396.01.T01
Chr1 exon 77451399 77451463 77451399 ID=MsG0180004396.01.T01:exon:45118;Parent=MsG0180004396.01.T01
Chr1 exon 77451649 77451732 77451649 ID=MsG0180004396.01.T01:exon:45117;Parent=MsG0180004396.01.T01
Chr1 exon 77451898 77451963 77451898 ID=MsG0180004396.01.T01:exon:45116;Parent=MsG0180004396.01.T01
Chr1 exon 77452060 77452118 77452060 ID=MsG0180004396.01.T01:exon:45115;Parent=MsG0180004396.01.T01
Chr1 exon 77452228 77452303 77452228 ID=MsG0180004396.01.T01:exon:45114;Parent=MsG0180004396.01.T01
Chr1 exon 77452386 77452489 77452386 ID=MsG0180004396.01.T01:exon:45113;Parent=MsG0180004396.01.T01
Chr1 exon 77452659 77452693 77452659 ID=MsG0180004396.01.T01:exon:45112;Parent=MsG0180004396.01.T01
Chr1 exon 77453213 77453269 77453213 ID=MsG0180004396.01.T01:exon:45111;Parent=MsG0180004396.01.T01
Chr1 exon 77453373 77453431 77453373 ID=MsG0180004396.01.T01:exon:45110;Parent=MsG0180004396.01.T01
Chr1 exon 77453593 77453831 77453593 ID=MsG0180004396.01.T01:exon:45109;Parent=MsG0180004396.01.T01
Chr1 exon 77454851 77454940 77454851 ID=MsG0180004396.01.T01:exon:45108;Parent=MsG0180004396.01.T01
Chr1 CDS 77454851 77454940 77454851 ID=MsG0180004396.01.T01:cds;Parent=MsG0180004396.01.T01
Chr1 CDS 77453593 77453831 77453593 ID=MsG0180004396.01.T01:cds;Parent=MsG0180004396.01.T01
Chr1 CDS 77453373 77453431 77453373 ID=MsG0180004396.01.T01:cds;Parent=MsG0180004396.01.T01
Chr1 CDS 77453213 77453269 77453213 ID=MsG0180004396.01.T01:cds;Parent=MsG0180004396.01.T01
Chr1 CDS 77452659 77452693 77452659 ID=MsG0180004396.01.T01:cds;Parent=MsG0180004396.01.T01
Chr1 CDS 77452386 77452489 77452386 ID=MsG0180004396.01.T01:cds;Parent=MsG0180004396.01.T01
Chr1 CDS 77452228 77452303 77452228 ID=MsG0180004396.01.T01:cds;Parent=MsG0180004396.01.T01
Chr1 CDS 77452060 77452118 77452060 ID=MsG0180004396.01.T01:cds;Parent=MsG0180004396.01.T01
Chr1 CDS 77451898 77451963 77451898 ID=MsG0180004396.01.T01:cds;Parent=MsG0180004396.01.T01
Chr1 CDS 77451649 77451732 77451649 ID=MsG0180004396.01.T01:cds;Parent=MsG0180004396.01.T01
Chr1 CDS 77451399 77451463 77451399 ID=MsG0180004396.01.T01:cds;Parent=MsG0180004396.01.T01
Chr1 CDS 77451202 77451284 77451202 ID=MsG0180004396.01.T01:cds;Parent=MsG0180004396.01.T01
Chr1 CDS 77450518 77450658 77450518 ID=MsG0180004396.01.T01:cds;Parent=MsG0180004396.01.T01
Chr1 CDS 77446276 77446437 77446276 ID=MsG0180004396.01.T01:cds;Parent=MsG0180004396.01.T01
Chr1 CDS 77445546 77445623 77445546 ID=MsG0180004396.01.T01:cds;Parent=MsG0180004396.01.T01
Chr1 CDS 77445169 77445214 77445169 ID=MsG0180004396.01.T01:cds;Parent=MsG0180004396.01.T01
Chr1 CDS 77444839 77444914 77444839 ID=MsG0180004396.01.T01:cds;Parent=MsG0180004396.01.T01
Chr1 CDS 77444525 77444600 77444525 ID=MsG0180004396.01.T01:cds;Parent=MsG0180004396.01.T01
Chr1 CDS 77444390 77444420 77444390 ID=MsG0180004396.01.T01:cds;Parent=MsG0180004396.01.T01
Chr1 CDS 77442624 77442712 77442624 ID=MsG0180004396.01.T01:cds;Parent=MsG0180004396.01.T01
Chr1 CDS 77442487 77442525 77442487 ID=MsG0180004396.01.T01:cds;Parent=MsG0180004396.01.T01
Chr1 CDS 77441068 77441162 77441068 ID=MsG0180004396.01.T01:cds;Parent=MsG0180004396.01.T01
Chr1 CDS 77440401 77440507 77440401 ID=MsG0180004396.01.T01:cds;Parent=MsG0180004396.01.T01
Chr1 CDS 77440069 77440142 77440069 ID=MsG0180004396.01.T01:cds;Parent=MsG0180004396.01.T01
Chr1 three_prime_UTR 77439668 77440068 77439668 ID=MsG0180004396.01.T01:three_prime_utr;Parent=MsG0180004396.01.T01
Gene Sequence

>MsG0180004396.01.T01

ATGGATAGCGAATCAATTGAAAGAAACGGTGGATCAAGGTTGCTACATCAAAAGAATGATGAGAAGAACAAGGGTGAGAATTGGGTGTATTTATTCAACATTCATCATCCATCCTCCCAAAGATTATTGGAAGTGCAAATAATTGGAGCAATGGCTAGGGTGATGGTGCTTGCATTTTACATCCTTGTGCTAGTGAATATTGCAAGTGTTCCACCATCTTCAGCTGCTCGTTTATTAGGAACCAACAATAAAACCAAAATATCTACTATAGAAAAGAAGGTTAAGAGTTATTTGTTACAAAATGGACTTGGTCAGACACCTCCAATGGGATGGAATAGCTGGAACCATTTCGGTTGTGATATCAATGAAAGTTTAATCCGAGATACAGCTGATGCAATGGTGTCAACTGGCCTTAGTGCCTTAGGGTACACATATATTAATTTAGATGATTGTTGGGCAGAACTTAATCGAGACTCCAAGGGAAATATGGTTCCCAAGGCTTCAACGTTTCCGTCAGGAATCAAGGCTCTAGCTCATTATGTTCACATGAAAGGCTTGAAGTTGGGGATTTATTCAGATGCTGGAAATCTAACTTGTAGTAAACGCATGCCTGGATCACTAAGACATGAAATACAAGATGCCAAAACATTTGCTTCTTGGGGAGTAGACTATTTGAAGTACGACAATTGTGAAAATAATGGTATAAGCGTTAGAAAAAGGTACCCACCAATGAGTGAAGCCTTATTAAACTCTGGAAGACCAATCTTCTTCTCTATGTGTGAATGGGGATGGGAAGATCCGGCAACATGGGCCAAAAGTGTGGGAAATAGTTGGAGAACAACAGGAGATATTGAAGATAACTGGAAGAGCATGACTTCTATAATAGATGAAAACGACAAATGGGCATCTTACGCTGGACCTGGAGGATGGAATGATCCTGATATGCTCGAAGTTGGAAACGGGGGCATGACCACAGAGGAATATCGTTCTCATTTTAGCATTTGGGCCCTAGCTAAGGTGTGGGCAGGTCCTTTAAGTAATAACAAAATAGTAGTGGTCTTATGGAATAGAAGTTCATCAAATGCAACAGTGACTGCATCCTGGTCAGACATAGGCCTGAAACCAGAAACTATAGTAGATGCCAGAGATTTATGGGAGATGGTGCCAGTGGATTCAGATGATTTATGGTATGCATATAATTTGATAGCTCCTGGTGATTCAATCCTGGCTGTTACTATTAGGAAGGTTCTTAGAGAAGCAGCTAATGGTGGAAGAGATGCTGAACGTGTTAAACTCAAATTGGAAATTAAAGTTGAAGATGGTGTGGATTACGACAAAGAAGGTTCGGTTTTGCGTGTTCGAGGGAAGAACATTCTAGAGAATGAACATGTCAAGGTAGATGTCTGGGATTCTTATGCTTTGGAGGTACTCCAGCAGGCCTCTGATCCCGCTGCAAGTGCTGATCTAGCTGTGGTGTTGATGCAAGAAGGATTAGCCCATATCCTCCTTATTGGTAAAAGTATGACTGTTACTCGTTCACGGATAGAAGCTTCAATTCCTCGAAAGCATGGGCCTGCTATTGCTGGTTATGAGAGAGCTTTGAATAAGTTCTTTAGATGTTTTACAGAATTCCTTGTCTGTAGGCATAGTTTAAAAGAGGTTCTAGATGCTCCAAATGTCATGAGCATGATAAAAGATACTAAGGCAGCACAAGAGGTTCGAATTCTGAAGGATTTTTATGACATGCTTTCAAATGATTCATCACGTGCTTGTTATGGAACAAAACATGTTGAGGTTGCCCATGAACGCCTAGCTGTGCAAACGCTTCTCATTGCAGATTCTCTTTTCAGGAATGCAGATATACCAACCAGGAAAAAGTTTGTTAACTTGGTCAATTCAGTTAAGGATTCTGGAGGTTCTGTCCATGTATTTTCATCCATGCATGTCTCTGGAGAACAACTAGAACAGATAAGTGGCATTGCTGCAATTCTTCGGTTTCCTCTCCCCGATCTTGAAGACATGGAGATGTAA
Protein sequence

>MsG0180004396.01.T01

MDSESIERNGGSRLLHQKNDEKNKGENWVYLFNIHHPSSQRLLEVQIIGAMARVMVLAFYILVLVNIASVPPSSAARLLGTNNKTKISTIEKKVKSYLLQNGLGQTPPMGWNSWNHFGCDINESLIRDTADAMVSTGLSALGYTYINLDDCWAELNRDSKGNMVPKASTFPSGIKALAHYVHMKGLKLGIYSDAGNLTCSKRMPGSLRHEIQDAKTFASWGVDYLKYDNCENNGISVRKRYPPMSEALLNSGRPIFFSMCEWGWEDPATWAKSVGNSWRTTGDIEDNWKSMTSIIDENDKWASYAGPGGWNDPDMLEVGNGGMTTEEYRSHFSIWALAKVWAGPLSNNKIVVVLWNRSSSNATVTASWSDIGLKPETIVDARDLWEMVPVDSDDLWYAYNLIAPGDSILAVTIRKVLREAANGGRDAERVKLKLEIKVEDGVDYDKEGSVLRVRGKNILENEHVKVDVWDSYALEVLQQASDPAASADLAVVLMQEGLAHILLIGKSMTVTRSRIEASIPRKHGPAIAGYERALNKFFRCFTEFLVCRHSLKEVLDAPNVMSMIKDTKAAQEVRILKDFYDMLSNDSSRACYGTKHVEVAHERLAVQTLLIADSLFRNADIPTRKKFVNLVNSVKDSGGSVHVFSSMHVSGEQLEQISGIAAILRFPLPDLEDMEM*