Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021764.01.T01 | XP_024638599.1 | 98.23 | 452 | 7 | 1 | 1 | 452 | 1 | 451 | 0 | 914 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021764.01.T01 | Q9FHZ1 | 70.235 | 383 | 105 | 4 | 69 | 446 | 27 | 405 | 0 | 535 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021764.01.T01 | I3S9T4 | 98.230 | 452 | 7 | 1 | 1 | 452 | 1 | 451 | 0.0 | 914 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180000113.01 | MsG0480021764.01 | 0.800797 | 1.217793e-48 | 5.722114e-46 |
MsG0180001704.01 | MsG0480021764.01 | 0.805347 | 1.394710e-49 | 7.361511e-47 |
MsG0180005927.01 | MsG0480021764.01 | 0.801888 | 7.278763e-49 | 3.516093e-46 |
MsG0280011415.01 | MsG0480021764.01 | 0.843466 | 1.377377e-58 | 2.156914e-55 |
MsG0380013504.01 | MsG0480021764.01 | 0.803948 | 2.732117e-49 | 1.391147e-46 |
MsG0480020322.01 | MsG0480021764.01 | 0.800110 | 1.681048e-48 | 7.762318e-46 |
MsG0480020323.01 | MsG0480021764.01 | 0.803146 | 4.006934e-49 | 1.998483e-46 |
MsG0480021764.01 | MsG0580024775.01 | 0.808115 | 3.628344e-50 | 2.057071e-47 |
MsG0480021764.01 | MsG0580024935.01 | 0.822914 | 1.835556e-53 | 1.557335e-50 |
MsG0480021764.01 | MsG0580025467.01 | 0.812046 | 5.162878e-51 | 3.247805e-48 |
MsG0480021764.01 | MsG0680033459.01 | 0.805691 | 1.181492e-49 | 6.291778e-47 |
MsG0480021764.01 | MsG0780039429.01 | 0.833219 | 6.047423e-56 | 6.919007e-53 |
MsG0480021764.01 | MsG0780040566.01 | -0.805288 | 1.435110e-49 | 7.563221e-47 |
MsG0480021764.01 | MsG0780040867.01 | 0.808959 | 2.396406e-50 | 1.389070e-47 |
MsG0480021764.01 | MsG0880042022.01 | 0.839842 | 1.243934e-57 | 1.739316e-54 |
MsG0480021764.01 | MsG0880042031.01 | 0.818771 | 1.646804e-52 | 1.244124e-49 |
MsG0480021764.01 | MsG0880042857.01 | 0.826146 | 3.183980e-54 | 2.961224e-51 |
MsG0480021764.01 | MsG0880045285.01 | 0.804641 | 1.959895e-49 | 1.015802e-46 |
MsG0480021764.01 | MsG0880045371.01 | 0.800336 | 1.511978e-48 | 7.022030e-46 |
MsG0480021764.01 | MsG0880045765.01 | 0.808905 | 2.461538e-50 | 1.424715e-47 |
MsG0480021764.01 | MsG0880045992.01 | 0.845657 | 3.542055e-59 | 5.945248e-56 |
MsG0480021764.01 | MsG0880046699.01 | 0.814735 | 1.324118e-51 | 8.956271e-49 |
MsG0380015689.01 | MsG0480021764.01 | 0.807136 | 5.855853e-50 | 3.236040e-47 |
MsG0380015703.01 | MsG0480021764.01 | 0.809702 | 1.660269e-50 | 9.816739e-48 |
MsG0380017387.01 | MsG0480021764.01 | 0.807213 | 5.640422e-50 | 3.123344e-47 |
MsG0280007417.01 | MsG0480021764.01 | 0.823918 | 1.069377e-53 | 9.333668e-51 |
MsG0280007647.01 | MsG0480021764.01 | 0.823233 | 1.546840e-53 | 1.324155e-50 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021764.01.T01 | MTR_4g076020 | 92.699 | 452 | 19 | 2 | 1 | 452 | 1 | 438 | 0.0 | 799 |
MsG0480021764.01.T01 | MTR_7g074650 | 63.025 | 357 | 128 | 2 | 88 | 444 | 441 | 793 | 1.24e-159 | 471 |
MsG0480021764.01.T01 | MTR_1g069725 | 50.943 | 371 | 172 | 4 | 75 | 442 | 99 | 462 | 1.29e-124 | 370 |
MsG0480021764.01.T01 | MTR_7g027190 | 37.838 | 407 | 232 | 7 | 55 | 443 | 270 | 673 | 4.27e-83 | 269 |
MsG0480021764.01.T01 | MTR_3g065980 | 36.154 | 390 | 215 | 9 | 76 | 443 | 163 | 540 | 4.62e-63 | 213 |
MsG0480021764.01.T01 | MTR_4g102790 | 35.584 | 385 | 228 | 11 | 79 | 447 | 286 | 666 | 1.94e-60 | 209 |
MsG0480021764.01.T01 | MTR_1g029420 | 36.364 | 374 | 217 | 10 | 85 | 443 | 225 | 592 | 6.29e-59 | 203 |
MsG0480021764.01.T01 | MTR_8g442410 | 37.113 | 388 | 227 | 8 | 79 | 452 | 149 | 533 | 1.46e-58 | 201 |
MsG0480021764.01.T01 | MTR_4g104020 | 33.079 | 393 | 246 | 9 | 66 | 443 | 130 | 520 | 1.14e-57 | 198 |
MsG0480021764.01.T01 | MTR_3g089055 | 35.027 | 374 | 222 | 10 | 85 | 443 | 203 | 570 | 2.24e-56 | 196 |
MsG0480021764.01.T01 | MTR_3g089055 | 35.027 | 374 | 222 | 10 | 85 | 443 | 198 | 565 | 2.52e-56 | 196 |
MsG0480021764.01.T01 | MTR_3g072710 | 37.778 | 405 | 218 | 14 | 69 | 445 | 104 | 502 | 6.45e-56 | 193 |
MsG0480021764.01.T01 | MTR_5g058860 | 36.765 | 408 | 224 | 14 | 70 | 450 | 104 | 504 | 6.46e-56 | 193 |
MsG0480021764.01.T01 | MTR_2g082090 | 32.297 | 418 | 259 | 10 | 40 | 443 | 172 | 579 | 2.45e-52 | 185 |
MsG0480021764.01.T01 | MTR_1g096030 | 32.587 | 402 | 226 | 11 | 75 | 443 | 70 | 459 | 1.99e-51 | 180 |
MsG0480021764.01.T01 | MTR_5g094450 | 33.422 | 374 | 232 | 8 | 85 | 443 | 161 | 532 | 3.19e-51 | 181 |
MsG0480021764.01.T01 | MTR_4g077760 | 34.037 | 379 | 220 | 10 | 82 | 443 | 190 | 555 | 6.71e-51 | 181 |
MsG0480021764.01.T01 | MTR_3g056110 | 32.361 | 377 | 234 | 9 | 82 | 443 | 172 | 542 | 3.58e-49 | 176 |
MsG0480021764.01.T01 | MTR_4g064150 | 28.499 | 393 | 267 | 5 | 67 | 445 | 343 | 735 | 3.56e-48 | 176 |
MsG0480021764.01.T01 | MTR_2g097410 | 28.283 | 396 | 256 | 6 | 70 | 445 | 356 | 743 | 4.58e-48 | 176 |
MsG0480021764.01.T01 | MTR_5g097480 | 32.626 | 377 | 235 | 8 | 81 | 443 | 173 | 544 | 1.05e-47 | 172 |
MsG0480021764.01.T01 | MTR_2g034280 | 31.070 | 383 | 250 | 5 | 75 | 443 | 193 | 575 | 7.53e-46 | 167 |
MsG0480021764.01.T01 | MTR_4g064120 | 26.585 | 410 | 287 | 5 | 50 | 445 | 219 | 628 | 4.18e-45 | 166 |
MsG0480021764.01.T01 | MTR_4g064180 | 27.845 | 413 | 278 | 8 | 50 | 445 | 219 | 628 | 2.77e-44 | 164 |
MsG0480021764.01.T01 | MTR_4g064160 | 29.306 | 389 | 257 | 7 | 71 | 445 | 302 | 686 | 4.38e-43 | 161 |
MsG0480021764.01.T01 | MTR_8g093070 | 32.143 | 392 | 235 | 12 | 69 | 446 | 125 | 499 | 8.47e-43 | 158 |
MsG0480021764.01.T01 | MTR_2g097467 | 27.765 | 425 | 274 | 9 | 43 | 445 | 243 | 656 | 2.03e-42 | 159 |
MsG0480021764.01.T01 | MTR_4g133660 | 30.688 | 378 | 242 | 9 | 80 | 442 | 170 | 542 | 3.17e-42 | 157 |
MsG0480021764.01.T01 | MTR_4g064200 | 30.390 | 385 | 244 | 9 | 77 | 445 | 276 | 652 | 4.10e-42 | 158 |
MsG0480021764.01.T01 | MTR_2g034260 | 30.769 | 390 | 244 | 10 | 75 | 443 | 200 | 584 | 1.06e-41 | 156 |
MsG0480021764.01.T01 | MTR_7g062120 | 28.682 | 387 | 244 | 9 | 80 | 445 | 367 | 742 | 2.75e-41 | 157 |
MsG0480021764.01.T01 | MTR_4g097080 | 28.796 | 382 | 242 | 13 | 84 | 444 | 132 | 504 | 4.30e-41 | 153 |
MsG0480021764.01.T01 | MTR_3g022830 | 29.469 | 414 | 233 | 10 | 86 | 443 | 26 | 436 | 5.55e-41 | 152 |
MsG0480021764.01.T01 | MTR_2g097463 | 28.682 | 387 | 247 | 8 | 77 | 445 | 282 | 657 | 6.51e-41 | 155 |
MsG0480021764.01.T01 | MTR_2g097473 | 28.165 | 387 | 249 | 8 | 77 | 445 | 281 | 656 | 2.53e-40 | 153 |
MsG0480021764.01.T01 | MTR_2g026250 | 28.796 | 382 | 246 | 10 | 80 | 443 | 223 | 596 | 2.63e-39 | 150 |
MsG0480021764.01.T01 | MTR_5g015490 | 28.354 | 395 | 249 | 14 | 76 | 444 | 105 | 491 | 2.12e-38 | 145 |
MsG0480021764.01.T01 | MTR_2g034250 | 28.718 | 390 | 253 | 9 | 75 | 443 | 200 | 585 | 1.41e-37 | 144 |
MsG0480021764.01.T01 | MTR_2g097350 | 29.365 | 378 | 251 | 9 | 80 | 445 | 269 | 642 | 1.46e-37 | 145 |
MsG0480021764.01.T01 | MTR_7g109580 | 29.688 | 384 | 247 | 10 | 75 | 443 | 179 | 554 | 2.34e-37 | 144 |
MsG0480021764.01.T01 | MTR_2g097310 | 28.756 | 386 | 243 | 10 | 80 | 445 | 267 | 640 | 3.78e-37 | 144 |
MsG0480021764.01.T01 | MTR_2g099110 | 27.654 | 405 | 258 | 13 | 67 | 444 | 56 | 452 | 1.19e-36 | 140 |
MsG0480021764.01.T01 | MTR_2g097390 | 28.900 | 391 | 236 | 12 | 80 | 445 | 270 | 643 | 1.02e-34 | 137 |
MsG0480021764.01.T01 | MTR_4g026485 | 28.378 | 370 | 238 | 9 | 86 | 443 | 270 | 624 | 1.57e-33 | 133 |
MsG0480021764.01.T01 | MTR_0092s0100 | 29.380 | 371 | 242 | 11 | 82 | 443 | 369 | 728 | 1.69e-33 | 134 |
MsG0480021764.01.T01 | MTR_0092s0100 | 29.380 | 371 | 242 | 11 | 82 | 443 | 372 | 731 | 1.82e-33 | 134 |
MsG0480021764.01.T01 | MTR_5g009080 | 32.524 | 206 | 136 | 2 | 76 | 281 | 47 | 249 | 1.35e-31 | 126 |
MsG0480021764.01.T01 | MTR_5g009080 | 39.456 | 147 | 87 | 2 | 299 | 443 | 332 | 478 | 6.13e-21 | 95.5 |
MsG0480021764.01.T01 | MTR_2g089100 | 25.062 | 403 | 263 | 9 | 85 | 451 | 52 | 451 | 2.92e-31 | 125 |
MsG0480021764.01.T01 | MTR_2g097380 | 28.608 | 395 | 223 | 15 | 70 | 445 | 209 | 563 | 4.60e-31 | 125 |
MsG0480021764.01.T01 | MTR_4g076140 | 33.810 | 210 | 128 | 3 | 76 | 281 | 39 | 241 | 5.89e-29 | 119 |
MsG0480021764.01.T01 | MTR_4g076140 | 40.268 | 149 | 83 | 4 | 299 | 443 | 323 | 469 | 1.64e-20 | 94.4 |
MsG0480021764.01.T01 | MTR_1g086970 | 25.195 | 385 | 270 | 10 | 75 | 443 | 96 | 478 | 2.32e-27 | 114 |
MsG0480021764.01.T01 | MTR_8g077940 | 26.933 | 375 | 241 | 14 | 86 | 443 | 183 | 541 | 5.67e-22 | 99.0 |
MsG0480021764.01.T01 | MTR_5g015950 | 23.923 | 418 | 257 | 14 | 85 | 445 | 35 | 448 | 2.10e-20 | 93.6 |
MsG0480021764.01.T01 | MTR_3g053270 | 23.923 | 418 | 257 | 14 | 85 | 445 | 35 | 448 | 2.10e-20 | 93.6 |
MsG0480021764.01.T01 | MTR_4g095500 | 22.837 | 416 | 262 | 12 | 85 | 445 | 59 | 470 | 8.65e-18 | 85.9 |
MsG0480021764.01.T01 | MTR_6g047750 | 27.575 | 301 | 185 | 12 | 166 | 443 | 372 | 662 | 1.31e-17 | 85.9 |
MsG0480021764.01.T01 | MTR_8g020840 | 23.077 | 390 | 257 | 12 | 85 | 443 | 171 | 548 | 4.81e-12 | 68.2 |
MsG0480021764.01.T01 | MTR_1g106590 | 30.000 | 120 | 82 | 1 | 79 | 198 | 124 | 241 | 2.22e-11 | 65.5 |
MsG0480021764.01.T01 | MTR_3g022580 | 36.036 | 111 | 69 | 2 | 334 | 443 | 74 | 183 | 2.68e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0480021764.01.T01 | AT5G41920 | 70.235 | 383 | 105 | 4 | 69 | 446 | 27 | 405 | 0.0 | 535 |
MsG0480021764.01.T01 | AT3G54220 | 61.053 | 380 | 147 | 1 | 65 | 444 | 273 | 651 | 3.39e-161 | 470 |
MsG0480021764.01.T01 | AT3G03450 | 36.772 | 378 | 223 | 9 | 76 | 443 | 174 | 545 | 1.97e-64 | 217 |
MsG0480021764.01.T01 | AT1G66350 | 36.364 | 374 | 219 | 9 | 76 | 443 | 146 | 506 | 7.49e-60 | 204 |
MsG0480021764.01.T01 | AT5G17490 | 36.508 | 378 | 218 | 10 | 76 | 443 | 151 | 516 | 9.73e-60 | 204 |
MsG0480021764.01.T01 | AT2G01570 | 33.858 | 381 | 229 | 9 | 76 | 445 | 215 | 583 | 1.19e-57 | 200 |
MsG0480021764.01.T01 | AT1G63100 | 34.987 | 383 | 228 | 8 | 80 | 442 | 247 | 628 | 1.71e-57 | 200 |
MsG0480021764.01.T01 | AT1G63100 | 34.987 | 383 | 228 | 8 | 80 | 442 | 272 | 653 | 3.63e-57 | 200 |
MsG0480021764.01.T01 | AT1G14920 | 34.555 | 382 | 225 | 9 | 76 | 445 | 163 | 531 | 1.89e-55 | 193 |
MsG0480021764.01.T01 | AT1G21450 | 32.353 | 374 | 233 | 8 | 85 | 443 | 225 | 593 | 5.73e-51 | 182 |
MsG0480021764.01.T01 | AT1G50600 | 33.511 | 376 | 231 | 8 | 82 | 443 | 156 | 526 | 1.92e-49 | 176 |
MsG0480021764.01.T01 | AT5G66770 | 35.696 | 381 | 213 | 14 | 82 | 443 | 217 | 584 | 2.03e-49 | 177 |
MsG0480021764.01.T01 | AT2G04890 | 32.796 | 372 | 234 | 9 | 80 | 443 | 50 | 413 | 2.64e-49 | 174 |
MsG0480021764.01.T01 | AT1G50600 | 33.511 | 376 | 231 | 8 | 82 | 443 | 231 | 601 | 7.35e-49 | 176 |
MsG0480021764.01.T01 | AT1G50600 | 33.511 | 376 | 231 | 8 | 82 | 443 | 227 | 597 | 7.69e-49 | 176 |
MsG0480021764.01.T01 | AT5G48150 | 31.720 | 372 | 236 | 8 | 86 | 443 | 123 | 490 | 2.01e-47 | 170 |
MsG0480021764.01.T01 | AT5G48150 | 31.720 | 372 | 236 | 8 | 86 | 443 | 123 | 490 | 2.01e-47 | 170 |
MsG0480021764.01.T01 | AT5G48150 | 31.720 | 372 | 236 | 8 | 86 | 443 | 123 | 490 | 2.01e-47 | 170 |
MsG0480021764.01.T01 | AT5G48150 | 31.720 | 372 | 236 | 8 | 86 | 443 | 123 | 490 | 2.01e-47 | 170 |
MsG0480021764.01.T01 | AT1G55580 | 34.243 | 403 | 220 | 13 | 85 | 443 | 44 | 445 | 2.06e-46 | 166 |
MsG0480021764.01.T01 | AT3G50650 | 33.889 | 360 | 209 | 10 | 103 | 443 | 193 | 542 | 1.79e-45 | 166 |
MsG0480021764.01.T01 | AT1G07530 | 31.593 | 383 | 235 | 11 | 82 | 445 | 393 | 767 | 2.97e-44 | 165 |
MsG0480021764.01.T01 | AT1G07520 | 29.798 | 396 | 245 | 11 | 75 | 445 | 144 | 531 | 2.97e-44 | 162 |
MsG0480021764.01.T01 | AT1G07520 | 29.798 | 396 | 245 | 11 | 75 | 445 | 144 | 531 | 2.97e-44 | 162 |
MsG0480021764.01.T01 | AT1G07520 | 29.798 | 396 | 245 | 11 | 75 | 445 | 308 | 695 | 9.50e-44 | 163 |
MsG0480021764.01.T01 | AT1G07520 | 29.798 | 396 | 245 | 11 | 75 | 445 | 309 | 696 | 9.96e-44 | 163 |
MsG0480021764.01.T01 | AT5G59450 | 26.952 | 397 | 267 | 8 | 68 | 446 | 210 | 601 | 4.84e-43 | 160 |
MsG0480021764.01.T01 | AT4G08250 | 30.769 | 390 | 246 | 12 | 71 | 442 | 93 | 476 | 9.22e-42 | 155 |
MsG0480021764.01.T01 | AT3G46600 | 28.571 | 378 | 251 | 6 | 82 | 445 | 1 | 373 | 1.34e-41 | 152 |
MsG0480021764.01.T01 | AT2G29065 | 30.026 | 383 | 242 | 11 | 85 | 445 | 252 | 630 | 5.40e-41 | 155 |
MsG0480021764.01.T01 | AT4G17230 | 31.688 | 385 | 234 | 9 | 80 | 445 | 153 | 527 | 5.88e-41 | 153 |
MsG0480021764.01.T01 | AT4G17230 | 31.688 | 385 | 234 | 9 | 80 | 445 | 153 | 527 | 5.88e-41 | 153 |
MsG0480021764.01.T01 | AT3G46600 | 28.421 | 380 | 253 | 6 | 80 | 445 | 207 | 581 | 9.95e-41 | 154 |
MsG0480021764.01.T01 | AT3G46600 | 28.421 | 380 | 253 | 6 | 80 | 445 | 175 | 549 | 1.56e-40 | 152 |
MsG0480021764.01.T01 | AT2G29060 | 29.843 | 382 | 243 | 11 | 82 | 444 | 281 | 656 | 5.03e-40 | 152 |
MsG0480021764.01.T01 | AT2G29060 | 29.843 | 382 | 243 | 11 | 82 | 444 | 318 | 693 | 7.22e-40 | 152 |
MsG0480021764.01.T01 | AT2G37650 | 27.968 | 379 | 253 | 8 | 80 | 444 | 330 | 702 | 3.29e-38 | 147 |
MsG0480021764.01.T01 | AT2G37650 | 27.968 | 379 | 253 | 8 | 80 | 444 | 342 | 714 | 3.42e-38 | 147 |
MsG0480021764.01.T01 | AT4G37650 | 26.854 | 391 | 251 | 10 | 85 | 445 | 146 | 531 | 4.64e-38 | 145 |
MsG0480021764.01.T01 | AT1G50420 | 35.437 | 206 | 132 | 1 | 76 | 281 | 48 | 252 | 2.00e-32 | 129 |
MsG0480021764.01.T01 | AT1G50420 | 38.298 | 141 | 85 | 2 | 305 | 443 | 339 | 479 | 1.15e-18 | 88.6 |
MsG0480021764.01.T01 | AT4G00150 | 28.226 | 372 | 227 | 13 | 86 | 443 | 209 | 554 | 2.23e-28 | 118 |
MsG0480021764.01.T01 | AT4G36710 | 26.108 | 406 | 272 | 12 | 56 | 443 | 90 | 485 | 1.17e-25 | 109 |
MsG0480021764.01.T01 | AT3G60630 | 29.967 | 307 | 178 | 10 | 161 | 443 | 329 | 622 | 2.14e-25 | 109 |
MsG0480021764.01.T01 | AT3G49950 | 25.831 | 391 | 248 | 16 | 85 | 444 | 30 | 409 | 2.62e-24 | 104 |
MsG0480021764.01.T01 | AT2G45160 | 28.895 | 353 | 204 | 15 | 113 | 443 | 312 | 639 | 1.41e-22 | 101 |
MsG0480021764.01.T01 | AT5G52510 | 25.707 | 389 | 241 | 15 | 86 | 443 | 269 | 640 | 3.98e-22 | 99.8 |
MsG0480021764.01.T01 | AT3G13840 | 25.285 | 439 | 275 | 17 | 36 | 443 | 94 | 510 | 1.83e-17 | 85.1 |
Find 130 sgRNAs with CRISPR-Local
Find 140 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCAACGGTCGTGATCAATTT+TGG | 0.239304 | 4:+63994463 | None:intergenic |
GATTTCGACCCGTTTCATTA+AGG | 0.250110 | 4:-63994207 | MsG0480021764.01.T01:CDS |
TCTACAGGTCTCAAACTTCT+AGG | 0.268544 | 4:-63995153 | MsG0480021764.01.T01:CDS |
GTTACCGATTTAGCAGTTAA+TGG | 0.272210 | 4:+63994952 | None:intergenic |
GCGCGTTTGGTGTTCATATT+AGG | 0.274828 | 4:+63995339 | None:intergenic |
GATATAACAGGAAGTGATTT+AGG | 0.289920 | 4:-63994514 | MsG0480021764.01.T01:CDS |
CATCCGATTGAGGGTAAAAT+TGG | 0.305802 | 4:-63994616 | MsG0480021764.01.T01:CDS |
TGATATCAAGATCAATGATA+TGG | 0.341996 | 4:+63994803 | None:intergenic |
ATCCGCTCGGTGAGAATTAC+CGG | 0.347135 | 4:-63994724 | MsG0480021764.01.T01:CDS |
CATTGTTTGTATGATATAAC+AGG | 0.349848 | 4:-63994526 | MsG0480021764.01.T01:CDS |
CGACGCTCTAGGGGATGGTT+TGG | 0.350025 | 4:-63994368 | MsG0480021764.01.T01:CDS |
AGATTCTTCTCCTTCGGTTT+CGG | 0.352465 | 4:+63995173 | None:intergenic |
TTCTCAGGCGAGTTTGTTGT+TGG | 0.363448 | 4:-63994173 | MsG0480021764.01.T01:CDS |
ACCTGTAGATTCTTCTCCTT+CGG | 0.364116 | 4:+63995167 | None:intergenic |
ATTTCGACCCGTTTCATTAA+GGG | 0.375385 | 4:-63994206 | MsG0480021764.01.T01:CDS |
ATGGTGGAGCAGCAGCTGTT+GGG | 0.385845 | 4:-63994322 | MsG0480021764.01.T01:CDS |
AATTGGAAGTGTAACTGAAC+CGG | 0.391845 | 4:-63994599 | MsG0480021764.01.T01:CDS |
CTCGCCATTAACTGCTAAAT+CGG | 0.397282 | 4:-63994956 | MsG0480021764.01.T01:CDS |
GACGCTCTAGGGGATGGTTT+GGG | 0.401024 | 4:-63994367 | MsG0480021764.01.T01:CDS |
GTTCAGTTATCTCCGGTAAA+AGG | 0.402006 | 4:+63995073 | None:intergenic |
ACTGAACTCTCTTCACCGTT+TGG | 0.403561 | 4:-63995057 | MsG0480021764.01.T01:CDS |
TTTGGTGTTCATATTAGGTT+TGG | 0.407369 | 4:+63995344 | None:intergenic |
AAGGGGTAACCCGGCTTCTC+AGG | 0.408285 | 4:-63994188 | MsG0480021764.01.T01:CDS |
AACAAACTCGCCTGAGAAGC+CGG | 0.410710 | 4:+63994178 | None:intergenic |
CCCGAGCGAACTCGCAAAAT+CGG | 0.412376 | 4:+63994654 | None:intergenic |
TCTCAGGCGAGTTTGTTGTT+GGG | 0.412821 | 4:-63994172 | MsG0480021764.01.T01:CDS |
CTTTGTTGATTGCTTCTGCT+TGG | 0.415097 | 4:-63994078 | MsG0480021764.01.T01:CDS |
CACGATCATGCTTCAAAGCT+TGG | 0.417387 | 4:-63995388 | None:intergenic |
ATTGATCACGACCGTTGAAC+AGG | 0.422992 | 4:-63994458 | MsG0480021764.01.T01:CDS |
ATGAGGCAATCGTGGTTCAT+TGG | 0.429274 | 4:-63994555 | MsG0480021764.01.T01:CDS |
TATGGTGGAGCAGCAGCTGT+TGG | 0.429820 | 4:-63994323 | MsG0480021764.01.T01:CDS |
TTCACTTCACCAGTCCTCTT+AGG | 0.431887 | 4:+63994265 | None:intergenic |
TAATGAAACGGGTCGAAATC+CGG | 0.438090 | 4:+63994210 | None:intergenic |
TCGCTGTTGGTGGGCCTAAG+AGG | 0.443649 | 4:-63994279 | MsG0480021764.01.T01:CDS |
GCGCGTTGTTCGACGCTCTA+GGG | 0.443864 | 4:-63994378 | MsG0480021764.01.T01:CDS |
ATGGTTCTCTCAAGCTTGGT+TGG | 0.447908 | 4:-63994111 | MsG0480021764.01.T01:CDS |
TCCGAGCTGTTAGAATCAAC+CGG | 0.448871 | 4:-63994688 | MsG0480021764.01.T01:CDS |
CTCAGGCGAGTTTGTTGTTG+GGG | 0.449006 | 4:-63994171 | MsG0480021764.01.T01:CDS |
TTCGAGTTTCATCCGATTGA+GGG | 0.456448 | 4:-63994625 | MsG0480021764.01.T01:CDS |
GTGTTCGCGTTGAGCGCGTT+TGG | 0.458235 | 4:+63995326 | None:intergenic |
TGTTCCACATCCTTGCTTCA+CGG | 0.458340 | 4:-63994756 | MsG0480021764.01.T01:CDS |
AAGTGAAAGTTGAGAGGTGG+GGG | 0.465242 | 4:-63994249 | MsG0480021764.01.T01:CDS |
TTCTCTCAAGCTTGGTTGGA+AGG | 0.467651 | 4:-63994107 | MsG0480021764.01.T01:CDS |
TGTTGTTGGGGATGTTTCCT+TGG | 0.471332 | 4:-63994159 | MsG0480021764.01.T01:CDS |
TCGGTGAGAATTACCGGTTT+CGG | 0.471801 | 4:-63994718 | MsG0480021764.01.T01:CDS |
TAGCTTCTTAGCGAGGTTTG+TGG | 0.472462 | 4:-63994419 | MsG0480021764.01.T01:CDS |
TATTAGGTTTGGAAGAGAGA+GGG | 0.475516 | 4:+63995355 | None:intergenic |
CGGGTTACCCCTTAATGAAA+CGG | 0.480762 | 4:+63994198 | None:intergenic |
TTGTTCGACGCTCTAGGGGA+TGG | 0.482887 | 4:-63994373 | MsG0480021764.01.T01:CDS |
TGAACCACGATTGCCTCATT+CGG | 0.484162 | 4:+63994559 | None:intergenic |
CAACGGTGAAACCGAGTTGT+AGG | 0.484579 | 4:+63994891 | None:intergenic |
GCAAGGATGTGGAACAATCC+TGG | 0.495564 | 4:+63994763 | None:intergenic |
ATATTAGGTTTGGAAGAGAG+AGG | 0.495958 | 4:+63995354 | None:intergenic |
CGTTTCATTAAGGGGTAACC+CGG | 0.501658 | 4:-63994197 | MsG0480021764.01.T01:CDS |
ACAAGTCTTTGAACATGAAA+CGG | 0.502255 | 4:-63995199 | MsG0480021764.01.T01:CDS |
AAAATCGGCGAGTCTTCTTC+CGG | 0.502799 | 4:+63994669 | None:intergenic |
GAGAATGGTTCTCTCAAGCT+TGG | 0.503025 | 4:-63994115 | MsG0480021764.01.T01:CDS |
GGGTTACCCCTTAATGAAAC+GGG | 0.504402 | 4:+63994199 | None:intergenic |
GTTCGAGTTTCATCCGATTG+AGG | 0.506283 | 4:-63994626 | MsG0480021764.01.T01:CDS |
TTCACCGTTTGGAACTTCAC+CGG | 0.509521 | 4:-63995046 | MsG0480021764.01.T01:CDS |
TTGGGGATGTTTCCTTGGAG+AGG | 0.512612 | 4:-63994154 | MsG0480021764.01.T01:CDS |
ATATCATGCAAGGACTTCAA+TGG | 0.519599 | 4:-63994786 | MsG0480021764.01.T01:CDS |
GGGGATGAGTTGAAACGGGC+CGG | 0.522400 | 4:-63994229 | MsG0480021764.01.T01:CDS |
AGCTGTTGGGGTGTGAGATA+AGG | 0.523381 | 4:-63994309 | MsG0480021764.01.T01:CDS |
CTCGGAAGAAGATCCGAAAC+CGG | 0.524772 | 4:+63994705 | None:intergenic |
AGCGCGTTGTTCGACGCTCT+AGG | 0.525994 | 4:-63994379 | MsG0480021764.01.T01:CDS |
TCCGGTTGATTCTAACAGCT+CGG | 0.529075 | 4:+63994687 | None:intergenic |
TGAAGTGAAAGTTGAGAGGT+GGG | 0.532489 | 4:-63994251 | MsG0480021764.01.T01:CDS |
GGTCTAACACCGAGTTGACC+CGG | 0.536418 | 4:+63994580 | None:intergenic |
ATGCAAGGACTTCAATGGCC+AGG | 0.537402 | 4:-63994781 | MsG0480021764.01.T01:CDS |
TCGACCGTGAAGCAAGGATG+TGG | 0.538964 | 4:+63994752 | None:intergenic |
CTACAACTCGGTTTCACCGT+TGG | 0.539952 | 4:-63994890 | MsG0480021764.01.T01:CDS |
CTACAGGTCTCAAACTTCTA+GGG | 0.540758 | 4:-63995152 | MsG0480021764.01.T01:CDS |
TATACATTGGTGGAAGAGAA+TGG | 0.544360 | 4:-63994130 | MsG0480021764.01.T01:CDS |
TTTCGACCCGTTTCATTAAG+GGG | 0.546650 | 4:-63994205 | MsG0480021764.01.T01:CDS |
TCTAGGGGATGGTTTGGGTG+TGG | 0.550225 | 4:-63994362 | MsG0480021764.01.T01:CDS |
AGGAACATTATCGCTGTTGG+TGG | 0.550674 | 4:-63994289 | MsG0480021764.01.T01:CDS |
CGCGTTTCAATCCTACAACT+CGG | 0.552518 | 4:-63994902 | MsG0480021764.01.T01:CDS |
ATAAGGAACATTATCGCTGT+TGG | 0.560983 | 4:-63994292 | MsG0480021764.01.T01:CDS |
ACTCGGTGTTAGACCGAATG+AGG | 0.563043 | 4:-63994572 | MsG0480021764.01.T01:CDS |
TCTTCTTCGACCGTGAAGCA+AGG | 0.563397 | 4:+63994746 | None:intergenic |
ACAAACTCGCCTGAGAAGCC+GGG | 0.565008 | 4:+63994179 | None:intergenic |
TGGTGGAGCAGCAGCTGTTG+GGG | 0.565735 | 4:-63994321 | MsG0480021764.01.T01:CDS |
GAAGAGAGTTCAGTTATCTC+CGG | 0.569254 | 4:+63995066 | None:intergenic |
CGTGGTGGAACACGACGCAC+AGG | 0.569793 | 4:-63995238 | MsG0480021764.01.T01:CDS |
AAATACGCACCAACTCGCTC+CGG | 0.573807 | 4:+63995027 | None:intergenic |
CGCGTTGTTCGACGCTCTAG+GGG | 0.574808 | 4:-63994377 | MsG0480021764.01.T01:CDS |
GGATAGTGTTGAGAGGCATA+TGG | 0.579083 | 4:-63994341 | MsG0480021764.01.T01:CDS |
TTGGAGAGGATATACATTGG+TGG | 0.579531 | 4:-63994140 | MsG0480021764.01.T01:CDS |
ACCGAAGGAGAAGAATCTAC+AGG | 0.582225 | 4:-63995168 | MsG0480021764.01.T01:CDS |
AAAGGTCGTTGGCGAAGTCG+AGG | 0.582557 | 4:+63995091 | None:intergenic |
ATTGATCTTGATATCATGCA+AGG | 0.582635 | 4:-63994796 | MsG0480021764.01.T01:CDS |
CTTCTTAGCGAGGTTTGTGG+AGG | 0.583800 | 4:-63994416 | MsG0480021764.01.T01:CDS |
ATTGGAAGTGTAACTGAACC+GGG | 0.584733 | 4:-63994598 | MsG0480021764.01.T01:CDS |
CGCTCCGGTGAAGTTCCAAA+CGG | 0.584887 | 4:+63995042 | None:intergenic |
GTGAAGTGAAAGTTGAGAGG+TGG | 0.586961 | 4:-63994252 | MsG0480021764.01.T01:CDS |
GAACAGGATCTTAGCCATGC+TGG | 0.589797 | 4:-63994442 | MsG0480021764.01.T01:CDS |
ATGTGCTGAGTGTGTTGCCA+TGG | 0.593544 | 4:-63995118 | MsG0480021764.01.T01:CDS |
GGAACTTCACCGGAGCGAGT+TGG | 0.594130 | 4:-63995036 | MsG0480021764.01.T01:CDS |
GGCGAAGTCGAGGTTATCCA+TGG | 0.595794 | 4:+63995101 | None:intergenic |
ACCAATGTATATCCTCTCCA+AGG | 0.595975 | 4:+63994142 | None:intergenic |
CTGTGCGTCGTGTTCCACCA+CGG | 0.597321 | 4:+63995239 | None:intergenic |
GTTGGTGGGCCTAAGAGGAC+TGG | 0.597993 | 4:-63994274 | MsG0480021764.01.T01:CDS |
TGGGTGTGGATAGTGTTGAG+AGG | 0.605554 | 4:-63994348 | MsG0480021764.01.T01:CDS |
GAAACGGAAACCGAAACCGA+AGG | 0.606138 | 4:-63995183 | MsG0480021764.01.T01:CDS |
ATGCTGGTAGCTTCTTAGCG+AGG | 0.608930 | 4:-63994426 | MsG0480021764.01.T01:CDS |
TATCTCCGGTAAAAGGTCGT+TGG | 0.618446 | 4:+63995080 | None:intergenic |
GAAAGATGGTTCATGAACGT+TGG | 0.619264 | 4:+63995290 | None:intergenic |
TCCTTGGAGAGGATATACAT+TGG | 0.623592 | 4:-63994143 | MsG0480021764.01.T01:CDS |
CGTGTGGTGAGTTCTTGTCT+CGG | 0.629592 | 4:-63994985 | MsG0480021764.01.T01:CDS |
GAAGTGAAAGTTGAGAGGTG+GGG | 0.636888 | 4:-63994250 | MsG0480021764.01.T01:CDS |
ATTAGGTTTGGAAGAGAGAG+GGG | 0.637508 | 4:+63995356 | None:intergenic |
ACATAAGCAATCAAATCAGA+CGG | 0.639734 | 4:+63994052 | None:intergenic |
GTAACTGAACCGGGTCAACT+CGG | 0.642976 | 4:-63994589 | MsG0480021764.01.T01:CDS |
GGAACATTATCGCTGTTGGT+GGG | 0.643479 | 4:-63994288 | MsG0480021764.01.T01:CDS |
TGAGATTGCTGACTCAGCTG+AGG | 0.650293 | 4:-63994486 | MsG0480021764.01.T01:CDS |
ACAAGCGTTACAAGCGCGTG+TGG | 0.650613 | 4:-63995001 | MsG0480021764.01.T01:CDS |
ATGGCTAAGATCCTGTTCAA+CGG | 0.673618 | 4:+63994447 | None:intergenic |
CTGGTGAAGTGAAAGTTGAG+AGG | 0.673783 | 4:-63994255 | MsG0480021764.01.T01:CDS |
TAGTGTTGAGAGGCATATGG+TGG | 0.675257 | 4:-63994338 | MsG0480021764.01.T01:CDS |
CTCTAGTGAGAAAACCGTGG+TGG | 0.676760 | 4:-63995253 | MsG0480021764.01.T01:CDS |
TCGCTAAGAAGCTACCAGCA+TGG | 0.677504 | 4:+63994428 | None:intergenic |
TAGACCGAATGAGGCAATCG+TGG | 0.677791 | 4:-63994563 | MsG0480021764.01.T01:CDS |
TTAGGTTTGGAAGAGAGAGG+GGG | 0.680053 | 4:+63995357 | None:intergenic |
ACGGTCGAAGAAGATCCGCT+CGG | 0.680718 | 4:-63994737 | MsG0480021764.01.T01:CDS |
AAGTGTGAGAATTTCACCAA+CGG | 0.681780 | 4:+63994874 | None:intergenic |
AACCGGTAATTCTCACCGAG+CGG | 0.697234 | 4:+63994722 | None:intergenic |
CTACTCTAGTGAGAAAACCG+TGG | 0.700727 | 4:-63995256 | MsG0480021764.01.T01:CDS |
AGTGAAAGTTGAGAGGTGGG+GGG | 0.702279 | 4:-63994248 | MsG0480021764.01.T01:CDS |
TCAATCGGATGAAACTCGAA+CGG | 0.709737 | 4:+63994628 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | CATTGTTTGTATGATATAAC+AGG | - | Chr4:63994900-63994919 | MsG0480021764.01.T01:CDS | 25.0% |
! | TGATATCAAGATCAATGATA+TGG | + | Chr4:63994626-63994645 | None:intergenic | 25.0% |
ACAAGTCTTTGAACATGAAA+CGG | - | Chr4:63994227-63994246 | MsG0480021764.01.T01:CDS | 30.0% | |
ACATAAGCAATCAAATCAGA+CGG | + | Chr4:63995377-63995396 | None:intergenic | 30.0% | |
ATTGATCTTGATATCATGCA+AGG | - | Chr4:63994630-63994649 | MsG0480021764.01.T01:CDS | 30.0% | |
GATATAACAGGAAGTGATTT+AGG | - | Chr4:63994912-63994931 | MsG0480021764.01.T01:CDS | 30.0% | |
!! | TAGTTAGGTCTTTTGAAAGA+TGG | + | Chr4:63994153-63994172 | None:intergenic | 30.0% |
!! | TTTGGTGTTCATATTAGGTT+TGG | + | Chr4:63994085-63994104 | None:intergenic | 30.0% |
AAGTGTGAGAATTTCACCAA+CGG | + | Chr4:63994555-63994574 | None:intergenic | 35.0% | |
ATAAGGAACATTATCGCTGT+TGG | - | Chr4:63995134-63995153 | MsG0480021764.01.T01:CDS | 35.0% | |
ATATCATGCAAGGACTTCAA+TGG | - | Chr4:63994640-63994659 | MsG0480021764.01.T01:CDS | 35.0% | |
ATATTAGGTTTGGAAGAGAG+AGG | + | Chr4:63994075-63994094 | None:intergenic | 35.0% | |
ATTTCGACCCGTTTCATTAA+GGG | - | Chr4:63995220-63995239 | MsG0480021764.01.T01:CDS | 35.0% | |
TATACATTGGTGGAAGAGAA+TGG | - | Chr4:63995296-63995315 | MsG0480021764.01.T01:CDS | 35.0% | |
TATTAGGTTTGGAAGAGAGA+GGG | + | Chr4:63994074-63994093 | None:intergenic | 35.0% | |
! | AATTGGAAGTGTAACTGAAC+CGG | - | Chr4:63994827-63994846 | MsG0480021764.01.T01:CDS | 35.0% |
! | CTTCCAATTTTACCCTCAAT+CGG | + | Chr4:63994816-63994835 | None:intergenic | 35.0% |
! | GTTTTCTCACTAGAGTAGTT+AGG | + | Chr4:63994168-63994187 | None:intergenic | 35.0% |
! | TGCGAATCAAGCAATTTTTC+AGG | - | Chr4:63994578-63994597 | MsG0480021764.01.T01:CDS | 35.0% |
!! | GTTACCGATTTAGCAGTTAA+TGG | + | Chr4:63994477-63994496 | None:intergenic | 35.0% |
!!! | TCAAGCAATTTTTCAGGCTT+TGG | - | Chr4:63994584-63994603 | MsG0480021764.01.T01:CDS | 35.0% |
ACCAATGTATATCCTCTCCA+AGG | + | Chr4:63995287-63995306 | None:intergenic | 40.0% | |
ACCTGTAGATTCTTCTCCTT+CGG | + | Chr4:63994262-63994281 | None:intergenic | 40.0% | |
AGATTCTTCTCCTTCGGTTT+CGG | + | Chr4:63994256-63994275 | None:intergenic | 40.0% | |
ATGGCTAAGATCCTGTTCAA+CGG | + | Chr4:63994982-63995001 | None:intergenic | 40.0% | |
ATTAGGTTTGGAAGAGAGAG+GGG | + | Chr4:63994073-63994092 | None:intergenic | 40.0% | |
CATCCGATTGAGGGTAAAAT+TGG | - | Chr4:63994810-63994829 | MsG0480021764.01.T01:CDS | 40.0% | |
CTACAGGTCTCAAACTTCTA+GGG | - | Chr4:63994274-63994293 | MsG0480021764.01.T01:CDS | 40.0% | |
CTCGCCATTAACTGCTAAAT+CGG | - | Chr4:63994470-63994489 | MsG0480021764.01.T01:CDS | 40.0% | |
GAAAGATGGTTCATGAACGT+TGG | + | Chr4:63994139-63994158 | None:intergenic | 40.0% | |
GAAGAGAGTTCAGTTATCTC+CGG | + | Chr4:63994363-63994382 | None:intergenic | 40.0% | |
GATTTCGACCCGTTTCATTA+AGG | - | Chr4:63995219-63995238 | MsG0480021764.01.T01:CDS | 40.0% | |
GTTCAGTTATCTCCGGTAAA+AGG | + | Chr4:63994356-63994375 | None:intergenic | 40.0% | |
TAATGAAACGGGTCGAAATC+CGG | + | Chr4:63995219-63995238 | None:intergenic | 40.0% | |
TCAATCGGATGAAACTCGAA+CGG | + | Chr4:63994801-63994820 | None:intergenic | 40.0% | |
TCCTTGGAGAGGATATACAT+TGG | - | Chr4:63995283-63995302 | MsG0480021764.01.T01:CDS | 40.0% | |
TCTACAGGTCTCAAACTTCT+AGG | - | Chr4:63994273-63994292 | MsG0480021764.01.T01:CDS | 40.0% | |
TGAAGTGAAAGTTGAGAGGT+GGG | - | Chr4:63995175-63995194 | MsG0480021764.01.T01:CDS | 40.0% | |
TTGGAGAGGATATACATTGG+TGG | - | Chr4:63995286-63995305 | MsG0480021764.01.T01:CDS | 40.0% | |
TTTCGACCCGTTTCATTAAG+GGG | - | Chr4:63995221-63995240 | MsG0480021764.01.T01:CDS | 40.0% | |
! | ATTGGAAGTGTAACTGAACC+GGG | - | Chr4:63994828-63994847 | MsG0480021764.01.T01:CDS | 40.0% |
! | CTTTGTTGATTGCTTCTGCT+TGG | - | Chr4:63995348-63995367 | MsG0480021764.01.T01:CDS | 40.0% |
! | TCAACGGTCGTGATCAATTT+TGG | + | Chr4:63994966-63994985 | None:intergenic | 40.0% |
! | TTCGAGTTTCATCCGATTGA+GGG | - | Chr4:63994801-63994820 | MsG0480021764.01.T01:CDS | 40.0% |
!!! | GCAATTTTTCAGGCTTTGGA+TGG | - | Chr4:63994588-63994607 | MsG0480021764.01.T01:CDS | 40.0% |
AAAATCGGCGAGTCTTCTTC+CGG | + | Chr4:63994760-63994779 | None:intergenic | 45.0% | |
AAGTGAAAGTTGAGAGGTGG+GGG | - | Chr4:63995177-63995196 | MsG0480021764.01.T01:CDS | 45.0% | |
ACCGAAGGAGAAGAATCTAC+AGG | - | Chr4:63994258-63994277 | MsG0480021764.01.T01:CDS | 45.0% | |
ACTGAACTCTCTTCACCGTT+TGG | - | Chr4:63994369-63994388 | MsG0480021764.01.T01:CDS | 45.0% | |
AGGAACATTATCGCTGTTGG+TGG | - | Chr4:63995137-63995156 | MsG0480021764.01.T01:CDS | 45.0% | |
ATGAGGCAATCGTGGTTCAT+TGG | - | Chr4:63994871-63994890 | MsG0480021764.01.T01:CDS | 45.0% | |
ATGGTTCTCTCAAGCTTGGT+TGG | - | Chr4:63995315-63995334 | MsG0480021764.01.T01:CDS | 45.0% | |
ATTGATCACGACCGTTGAAC+AGG | - | Chr4:63994968-63994987 | MsG0480021764.01.T01:CDS | 45.0% | |
CGCGTTTCAATCCTACAACT+CGG | - | Chr4:63994524-63994543 | MsG0480021764.01.T01:CDS | 45.0% | |
CGGGTTACCCCTTAATGAAA+CGG | + | Chr4:63995231-63995250 | None:intergenic | 45.0% | |
CGTTTCATTAAGGGGTAACC+CGG | - | Chr4:63995229-63995248 | MsG0480021764.01.T01:CDS | 45.0% | |
CTACTCTAGTGAGAAAACCG+TGG | - | Chr4:63994170-63994189 | MsG0480021764.01.T01:CDS | 45.0% | |
CTGGTGAAGTGAAAGTTGAG+AGG | - | Chr4:63995171-63995190 | MsG0480021764.01.T01:CDS | 45.0% | |
GAAGTGAAAGTTGAGAGGTG+GGG | - | Chr4:63995176-63995195 | MsG0480021764.01.T01:CDS | 45.0% | |
GAGAATGGTTCTCTCAAGCT+TGG | - | Chr4:63995311-63995330 | MsG0480021764.01.T01:CDS | 45.0% | |
GGAACATTATCGCTGTTGGT+GGG | - | Chr4:63995138-63995157 | MsG0480021764.01.T01:CDS | 45.0% | |
GGGTTACCCCTTAATGAAAC+GGG | + | Chr4:63995230-63995249 | None:intergenic | 45.0% | |
GTGAAGTGAAAGTTGAGAGG+TGG | - | Chr4:63995174-63995193 | MsG0480021764.01.T01:CDS | 45.0% | |
TAGCTTCTTAGCGAGGTTTG+TGG | - | Chr4:63995007-63995026 | MsG0480021764.01.T01:CDS | 45.0% | |
TATCTCCGGTAAAAGGTCGT+TGG | + | Chr4:63994349-63994368 | None:intergenic | 45.0% | |
TCCGAGCTGTTAGAATCAAC+CGG | - | Chr4:63994738-63994757 | MsG0480021764.01.T01:CDS | 45.0% | |
TGAACCACGATTGCCTCATT+CGG | + | Chr4:63994870-63994889 | None:intergenic | 45.0% | |
TGTTCCACATCCTTGCTTCA+CGG | - | Chr4:63994670-63994689 | MsG0480021764.01.T01:CDS | 45.0% | |
TGTTGTTGGGGATGTTTCCT+TGG | - | Chr4:63995267-63995286 | MsG0480021764.01.T01:CDS | 45.0% | |
TTAGGTTTGGAAGAGAGAGG+GGG | + | Chr4:63994072-63994091 | None:intergenic | 45.0% | |
TTCACTTCACCAGTCCTCTT+AGG | + | Chr4:63995164-63995183 | None:intergenic | 45.0% | |
TTCTCTCAAGCTTGGTTGGA+AGG | - | Chr4:63995319-63995338 | MsG0480021764.01.T01:CDS | 45.0% | |
! | GGATAGTGTTGAGAGGCATA+TGG | - | Chr4:63995085-63995104 | MsG0480021764.01.T01:CDS | 45.0% |
! | GTTCGAGTTTCATCCGATTG+AGG | - | Chr4:63994800-63994819 | MsG0480021764.01.T01:CDS | 45.0% |
! | TAGTGTTGAGAGGCATATGG+TGG | - | Chr4:63995088-63995107 | MsG0480021764.01.T01:CDS | 45.0% |
! | TCCGGTTGATTCTAACAGCT+CGG | + | Chr4:63994742-63994761 | None:intergenic | 45.0% |
! | TTCACCGTTTGGAACTTCAC+CGG | - | Chr4:63994380-63994399 | MsG0480021764.01.T01:CDS | 45.0% |
!! | GCGCGTTTGGTGTTCATATT+AGG | + | Chr4:63994090-63994109 | None:intergenic | 45.0% |
!! | TCGGTGAGAATTACCGGTTT+CGG | - | Chr4:63994708-63994727 | MsG0480021764.01.T01:CDS | 45.0% |
!! | TCTCAGGCGAGTTTGTTGTT+GGG | - | Chr4:63995254-63995273 | MsG0480021764.01.T01:CDS | 45.0% |
!! | TTCTCAGGCGAGTTTGTTGT+TGG | - | Chr4:63995253-63995272 | MsG0480021764.01.T01:CDS | 45.0% |
AAATACGCACCAACTCGCTC+CGG | + | Chr4:63994402-63994421 | None:intergenic | 50.0% | |
AACAAACTCGCCTGAGAAGC+CGG | + | Chr4:63995251-63995270 | None:intergenic | 50.0% | |
AACCGGTAATTCTCACCGAG+CGG | + | Chr4:63994707-63994726 | None:intergenic | 50.0% | |
AGCTGTTGGGGTGTGAGATA+AGG | - | Chr4:63995117-63995136 | MsG0480021764.01.T01:CDS | 50.0% | |
AGTGAAAGTTGAGAGGTGGG+GGG | - | Chr4:63995178-63995197 | MsG0480021764.01.T01:CDS | 50.0% | |
ATGCAAGGACTTCAATGGCC+AGG | - | Chr4:63994645-63994664 | MsG0480021764.01.T01:CDS | 50.0% | |
ATGCTGGTAGCTTCTTAGCG+AGG | - | Chr4:63995000-63995019 | MsG0480021764.01.T01:CDS | 50.0% | |
ATGTGCTGAGTGTGTTGCCA+TGG | - | Chr4:63994308-63994327 | MsG0480021764.01.T01:CDS | 50.0% | |
CAACGGTGAAACCGAGTTGT+AGG | + | Chr4:63994538-63994557 | None:intergenic | 50.0% | |
CGTGTGGTGAGTTCTTGTCT+CGG | - | Chr4:63994441-63994460 | MsG0480021764.01.T01:CDS | 50.0% | |
CTACAACTCGGTTTCACCGT+TGG | - | Chr4:63994536-63994555 | MsG0480021764.01.T01:CDS | 50.0% | |
CTCGGAAGAAGATCCGAAAC+CGG | + | Chr4:63994724-63994743 | None:intergenic | 50.0% | |
CTCTAGTGAGAAAACCGTGG+TGG | - | Chr4:63994173-63994192 | MsG0480021764.01.T01:CDS | 50.0% | |
CTTCTTAGCGAGGTTTGTGG+AGG | - | Chr4:63995010-63995029 | MsG0480021764.01.T01:CDS | 50.0% | |
GAAACGGAAACCGAAACCGA+AGG | - | Chr4:63994243-63994262 | MsG0480021764.01.T01:CDS | 50.0% | |
GAACAGGATCTTAGCCATGC+TGG | - | Chr4:63994984-63995003 | MsG0480021764.01.T01:CDS | 50.0% | |
GCAAGGATGTGGAACAATCC+TGG | + | Chr4:63994666-63994685 | None:intergenic | 50.0% | |
GTAACTGAACCGGGTCAACT+CGG | - | Chr4:63994837-63994856 | MsG0480021764.01.T01:CDS | 50.0% | |
TAGACCGAATGAGGCAATCG+TGG | - | Chr4:63994863-63994882 | MsG0480021764.01.T01:CDS | 50.0% | |
TCGCTAAGAAGCTACCAGCA+TGG | + | Chr4:63995001-63995020 | None:intergenic | 50.0% | |
TCTTCTTCGACCGTGAAGCA+AGG | + | Chr4:63994683-63994702 | None:intergenic | 50.0% | |
TTGGGGATGTTTCCTTGGAG+AGG | - | Chr4:63995272-63995291 | MsG0480021764.01.T01:CDS | 50.0% | |
! | ATCCGCTCGGTGAGAATTAC+CGG | - | Chr4:63994702-63994721 | MsG0480021764.01.T01:CDS | 50.0% |
! | CTTCGCCAACGACCTTTTAC+CGG | - | Chr4:63994341-63994360 | MsG0480021764.01.T01:CDS | 50.0% |
! | TGGGTGTGGATAGTGTTGAG+AGG | - | Chr4:63995078-63995097 | MsG0480021764.01.T01:CDS | 50.0% |
!! | ACTCGGTGTTAGACCGAATG+AGG | - | Chr4:63994854-63994873 | MsG0480021764.01.T01:CDS | 50.0% |
!! | CTCAGGCGAGTTTGTTGTTG+GGG | - | Chr4:63995255-63995274 | MsG0480021764.01.T01:CDS | 50.0% |
!! | TGAGATTGCTGACTCAGCTG+AGG | - | Chr4:63994940-63994959 | MsG0480021764.01.T01:CDS | 50.0% |
AAAGGTCGTTGGCGAAGTCG+AGG | + | Chr4:63994338-63994357 | None:intergenic | 55.0% | |
ACAAACTCGCCTGAGAAGCC+GGG | + | Chr4:63995250-63995269 | None:intergenic | 55.0% | |
ACAAGCGTTACAAGCGCGTG+TGG | - | Chr4:63994425-63994444 | MsG0480021764.01.T01:CDS | 55.0% | |
ACGGTCGAAGAAGATCCGCT+CGG | - | Chr4:63994689-63994708 | MsG0480021764.01.T01:CDS | 55.0% | |
CCCGAGCGAACTCGCAAAAT+CGG | + | Chr4:63994775-63994794 | None:intergenic | 55.0% | |
CGCTCCGGTGAAGTTCCAAA+CGG | + | Chr4:63994387-63994406 | None:intergenic | 55.0% | |
GGCGAAGTCGAGGTTATCCA+TGG | + | Chr4:63994328-63994347 | None:intergenic | 55.0% | |
TCGACCGTGAAGCAAGGATG+TGG | + | Chr4:63994677-63994696 | None:intergenic | 55.0% | |
! | ATGGTGGAGCAGCAGCTGTT+GGG | - | Chr4:63995104-63995123 | MsG0480021764.01.T01:CDS | 55.0% |
! | CCGATTTTGCGAGTTCGCTC+GGG | - | Chr4:63994772-63994791 | MsG0480021764.01.T01:CDS | 55.0% |
! | GGTCTAACACCGAGTTGACC+CGG | + | Chr4:63994849-63994868 | None:intergenic | 55.0% |
! | GGTGGGGGGATGAGTTGAAA+CGG | - | Chr4:63995192-63995211 | MsG0480021764.01.T01:CDS | 55.0% |
! | GTGGGGGGATGAGTTGAAAC+GGG | - | Chr4:63995193-63995212 | MsG0480021764.01.T01:CDS | 55.0% |
! | TATGGTGGAGCAGCAGCTGT+TGG | - | Chr4:63995103-63995122 | MsG0480021764.01.T01:CDS | 55.0% |
! | TCTAGGGGATGGTTTGGGTG+TGG | - | Chr4:63995064-63995083 | MsG0480021764.01.T01:CDS | 55.0% |
!! | GACGCTCTAGGGGATGGTTT+GGG | - | Chr4:63995059-63995078 | MsG0480021764.01.T01:CDS | 55.0% |
!! | GCCGATTTTGCGAGTTCGCT+CGG | - | Chr4:63994771-63994790 | MsG0480021764.01.T01:CDS | 55.0% |
!! | TTGTTCGACGCTCTAGGGGA+TGG | - | Chr4:63995053-63995072 | MsG0480021764.01.T01:CDS | 55.0% |
AAGGGGTAACCCGGCTTCTC+AGG | - | Chr4:63995238-63995257 | MsG0480021764.01.T01:CDS | 60.0% | |
AGCGCGTTGTTCGACGCTCT+AGG | - | Chr4:63995047-63995066 | MsG0480021764.01.T01:CDS | 60.0% | |
CGCGTTGTTCGACGCTCTAG+GGG | - | Chr4:63995049-63995068 | MsG0480021764.01.T01:CDS | 60.0% | |
CTGTGCGTCGTGTTCCACCA+CGG | + | Chr4:63994190-63994209 | None:intergenic | 60.0% | |
GCGCGTTGTTCGACGCTCTA+GGG | - | Chr4:63995048-63995067 | MsG0480021764.01.T01:CDS | 60.0% | |
GGAACTTCACCGGAGCGAGT+TGG | - | Chr4:63994390-63994409 | MsG0480021764.01.T01:CDS | 60.0% | |
GTGTTCGCGTTGAGCGCGTT+TGG | + | Chr4:63994103-63994122 | None:intergenic | 60.0% | |
TGGTGGAGCAGCAGCTGTTG+GGG | - | Chr4:63995105-63995124 | MsG0480021764.01.T01:CDS | 60.0% | |
! | GGGGATGAGTTGAAACGGGC+CGG | - | Chr4:63995197-63995216 | MsG0480021764.01.T01:CDS | 60.0% |
! | GTTGGTGGGCCTAAGAGGAC+TGG | - | Chr4:63995152-63995171 | MsG0480021764.01.T01:CDS | 60.0% |
! | TCGCTGTTGGTGGGCCTAAG+AGG | - | Chr4:63995147-63995166 | MsG0480021764.01.T01:CDS | 60.0% |
!! | CGACGCTCTAGGGGATGGTT+TGG | - | Chr4:63995058-63995077 | MsG0480021764.01.T01:CDS | 60.0% |
! | CGTGGTGGAACACGACGCAC+AGG | - | Chr4:63994188-63994207 | MsG0480021764.01.T01:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr4 | gene | 63994045 | 63995403 | 63994045 | ID=MsG0480021764.01;Name=MsG0480021764.01 |
Chr4 | mRNA | 63994045 | 63995403 | 63994045 | ID=MsG0480021764.01.T01;Parent=MsG0480021764.01;Name=MsG0480021764.01.T01;_AED=0.45;_eAED=0.45;_QI=0|-1|0|1|-1|1|1|0|452 |
Chr4 | exon | 63994045 | 63995403 | 63994045 | ID=MsG0480021764.01.T01:exon:7051;Parent=MsG0480021764.01.T01 |
Chr4 | CDS | 63994045 | 63995403 | 63994045 | ID=MsG0480021764.01.T01:cds;Parent=MsG0480021764.01.T01 |
Gene Sequence |
Protein sequence |