AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015362.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015362.01.T01 MTR_3g068200 95.908 391 12 2 32 421 1 388 0.0 770
MsG0380015362.01.T01 MTR_5g080680 65.649 393 122 4 32 414 1 390 1.49e-167 476
MsG0380015362.01.T01 MTR_5g080680 59.790 286 102 4 32 307 1 283 7.45e-110 325
MsG0380015362.01.T01 MTR_4g125810 45.133 339 141 6 104 413 186 508 1.15e-87 276
MsG0380015362.01.T01 MTR_1g028300 50.318 314 126 9 104 409 89 380 6.38e-83 259
MsG0380015362.01.T01 MTR_2g040500 41.349 341 162 5 107 413 204 540 7.23e-81 259
MsG0380015362.01.T01 MTR_3g104710 43.452 336 138 5 116 413 223 544 9.46e-81 259
MsG0380015362.01.T01 MTR_1g015110 43.582 335 134 7 116 413 232 548 2.23e-79 255
MsG0380015362.01.T01 MTR_8g102550 43.987 316 130 5 124 415 103 395 3.89e-77 245
MsG0380015362.01.T01 MTR_5g009370 51.867 241 101 4 125 359 54 285 2.81e-76 241
MsG0380015362.01.T01 MTR_3g091060 34.174 357 180 7 63 417 46 349 3.12e-46 163
MsG0380015362.01.T01 MTR_3g105730 34.564 298 156 3 124 421 13 271 8.04e-46 159
MsG0380015362.01.T01 MTR_3g105730 34.564 298 156 3 124 421 35 293 1.00e-45 160
MsG0380015362.01.T01 MTR_1g115570 36.700 297 143 5 124 420 96 347 1.94e-44 158
MsG0380015362.01.T01 MTR_1g014640 36.242 298 150 6 124 421 78 335 5.10e-44 157
MsG0380015362.01.T01 MTR_1g013400 36.242 298 150 6 124 421 78 335 5.10e-44 157
MsG0380015362.01.T01 MTR_5g071550 32.378 349 183 9 77 409 64 375 3.32e-38 142
MsG0380015362.01.T01 MTR_3g464650 32.639 288 156 6 124 409 64 315 5.14e-38 140
MsG0380015362.01.T01 MTR_3g464700 34.902 255 145 5 124 375 88 324 1.83e-36 136
MsG0380015362.01.T01 MTR_5g071550 33.688 282 153 6 77 343 64 326 1.23e-33 129
MsG0380015362.01.T01 MTR_4g007440 34.767 279 133 9 123 359 23 294 6.42e-33 127
MsG0380015362.01.T01 MTR_3g105880 33.333 273 133 9 123 353 23 288 8.76e-32 123
MsG0380015362.01.T01 MTR_1g050520 31.987 297 168 8 116 409 380 645 9.98e-32 127
MsG0380015362.01.T01 MTR_3g105880 33.333 273 133 9 123 353 23 288 2.17e-31 123
MsG0380015362.01.T01 MTR_5g024340 32.177 317 162 11 109 411 71 348 2.41e-30 120
MsG0380015362.01.T01 MTR_2g078760 34.256 289 144 10 125 409 8 254 4.14e-29 114
MsG0380015362.01.T01 MTR_2g078760 32.343 303 159 9 111 409 73 333 6.55e-29 115
MsG0380015362.01.T01 MTR_4g123080 32.292 288 140 10 138 408 77 326 8.32e-29 116
MsG0380015362.01.T01 MTR_4g123080 32.292 288 140 10 138 408 95 344 1.82e-28 115
MsG0380015362.01.T01 MTR_8g463130 33.942 274 136 7 136 406 20 251 2.06e-28 112
MsG0380015362.01.T01 MTR_8g463130 33.942 274 136 7 136 406 48 279 2.10e-28 113
MsG0380015362.01.T01 MTR_2g033000 31.679 262 144 6 151 406 97 329 3.24e-28 114
MsG0380015362.01.T01 MTR_3g107880 31.090 312 160 10 112 406 12 285 3.73e-28 113
MsG0380015362.01.T01 MTR_4g094208 31.271 291 154 9 123 409 29 277 4.55e-28 112
MsG0380015362.01.T01 MTR_1g014190 30.466 279 139 10 123 356 23 291 6.90e-28 113
MsG0380015362.01.T01 MTR_3g107880 31.090 312 160 10 112 406 70 343 9.47e-28 113
MsG0380015362.01.T01 MTR_3g107880 31.090 312 160 10 112 406 69 342 9.52e-28 113
MsG0380015362.01.T01 MTR_4g094542 33.333 234 121 5 136 360 132 339 2.58e-27 112
MsG0380015362.01.T01 MTR_1g014190 30.435 276 137 10 123 353 61 326 2.85e-27 112
MsG0380015362.01.T01 MTR_1g086350 29.667 300 148 9 131 406 71 331 6.45e-27 111
MsG0380015362.01.T01 MTR_1g086350 29.667 300 148 9 131 406 87 347 7.50e-27 111
MsG0380015362.01.T01 MTR_2g008850 31.987 297 151 11 120 409 29 281 5.73e-26 106
MsG0380015362.01.T01 MTR_5g063940 30.872 298 154 8 119 409 30 282 3.15e-25 104
MsG0380015362.01.T01 MTR_2g008850 31.900 279 141 9 136 409 1 235 3.30e-25 103
MsG0380015362.01.T01 MTR_2g078760 33.475 236 134 6 111 342 73 289 3.31e-25 104
MsG0380015362.01.T01 MTR_3g074610 30.492 305 164 8 110 409 21 282 5.13e-25 103
MsG0380015362.01.T01 MTR_4g116420 28.947 266 143 8 150 406 120 348 5.88e-25 105
MsG0380015362.01.T01 MTR_1g086350 29.670 273 137 8 150 406 12 245 2.83e-24 102
MsG0380015362.01.T01 MTR_3g491830 25.309 324 170 8 123 408 60 349 7.58e-24 102
MsG0380015362.01.T01 MTR_5g063940 31.418 261 128 7 155 409 20 235 1.16e-23 99.0
MsG0380015362.01.T01 MTR_7g070510 31.061 264 120 10 137 352 75 324 7.00e-23 100
MsG0380015362.01.T01 MTR_4g013295 30.315 254 126 8 131 345 55 296 2.11e-22 98.2
MsG0380015362.01.T01 MTR_1g071370 32.068 237 96 6 231 417 226 447 4.29e-22 99.8
MsG0380015362.01.T01 MTR_7g112490 28.267 329 186 11 64 352 3 321 5.59e-22 97.1
MsG0380015362.01.T01 MTR_8g017240 32.422 256 135 10 126 352 55 301 6.79e-22 97.1
MsG0380015362.01.T01 MTR_7g112490 28.485 330 184 12 64 352 21 339 7.76e-22 97.1
MsG0380015362.01.T01 MTR_4g120410 31.890 254 146 10 131 360 68 318 8.70e-22 96.3
MsG0380015362.01.T01 MTR_1g083690 32.971 276 141 13 111 352 45 310 9.08e-22 96.3
MsG0380015362.01.T01 MTR_2g090190 32.222 270 121 11 131 352 68 323 4.51e-21 95.5
MsG0380015362.01.T01 MTR_3g105730 35.260 173 95 4 124 296 35 190 6.76e-21 91.3
MsG0380015362.01.T01 MTR_2g435550 30.418 263 124 10 131 352 55 299 8.39e-21 93.2
MsG0380015362.01.T01 MTR_2g435550 30.418 263 124 10 131 352 69 313 1.06e-20 93.2
MsG0380015362.01.T01 MTR_2g435550 30.418 263 124 10 131 352 69 313 1.66e-20 92.8
MsG0380015362.01.T01 MTR_7g080170 29.329 283 128 8 131 352 73 344 3.02e-20 93.2
MsG0380015362.01.T01 MTR_7g080170 36.022 186 93 6 184 352 60 236 1.65e-19 90.1
MsG0380015362.01.T01 MTR_1g016620 30.682 264 134 11 126 354 41 290 2.13e-19 89.4
MsG0380015362.01.T01 MTR_1g106855 26.804 291 163 9 154 408 61 337 4.88e-19 88.6
MsG0380015362.01.T01 MTR_4g118340 28.745 247 124 10 137 348 69 298 3.90e-18 86.3
MsG0380015362.01.T01 MTR_4g037470 30.996 271 124 11 131 352 74 330 5.77e-18 86.3
MsG0380015362.01.T01 MTR_6g081850 26.871 294 174 8 86 357 11 285 6.96e-18 84.3
MsG0380015362.01.T01 MTR_4g037470 35.135 185 91 6 184 352 168 339 1.70e-17 84.7
MsG0380015362.01.T01 MTR_1g106855 27.660 235 123 8 154 352 61 284 3.19e-17 82.0
MsG0380015362.01.T01 MTR_7g021530 30.515 272 131 9 131 352 65 328 4.44e-17 83.2
MsG0380015362.01.T01 MTR_1g116260 25.987 304 147 11 154 408 80 354 5.97e-17 82.4
MsG0380015362.01.T01 MTR_7g021530 30.515 272 131 9 131 352 106 369 6.96e-17 82.8
MsG0380015362.01.T01 MTR_2g020970 29.600 250 124 12 134 348 67 299 3.23e-16 80.1
MsG0380015362.01.T01 MTR_8g074930 27.885 312 150 10 145 408 69 353 3.37e-16 80.1
MsG0380015362.01.T01 MTR_2g020970 29.719 249 123 12 134 347 67 298 3.75e-16 80.5
MsG0380015362.01.T01 MTR_1g067210 24.749 299 157 9 154 408 76 350 3.75e-16 80.1
MsG0380015362.01.T01 MTR_7g100240 26.068 234 126 7 154 352 71 292 3.93e-16 79.7
MsG0380015362.01.T01 MTR_7g021530 29.893 281 137 10 122 352 8 278 8.76e-16 78.6
MsG0380015362.01.T01 MTR_1g112840 28.870 239 115 8 154 353 81 303 1.02e-15 79.0
MsG0380015362.01.T01 MTR_5g071550 28.767 219 123 5 77 281 64 263 1.75e-15 77.0
MsG0380015362.01.T01 MTR_7g081020 27.350 234 125 6 154 353 76 298 3.25e-15 76.6
MsG0380015362.01.T01 MTR_7g081020 25.436 287 166 7 154 406 76 348 3.78e-15 77.0
MsG0380015362.01.T01 MTR_6g087000 27.953 254 128 9 137 352 107 343 1.67e-14 76.3
MsG0380015362.01.T01 MTR_7g112430 29.245 212 118 5 152 348 66 260 1.78e-14 75.1
MsG0380015362.01.T01 MTR_8g074930 29.707 239 87 8 225 408 29 241 2.19e-14 73.6
MsG0380015362.01.T01 MTR_7g029240 32.093 215 108 10 152 346 66 262 2.45e-14 74.7
MsG0380015362.01.T01 MTR_6g087000 27.953 254 128 9 137 352 107 343 3.11e-14 75.5
MsG0380015362.01.T01 MTR_1g110210 28.571 217 123 6 147 348 61 260 4.32e-14 73.2
MsG0380015362.01.T01 MTR_7g090530 28.063 253 134 10 135 353 53 291 6.89e-14 73.6
MsG0380015362.01.T01 MTR_3g032700 26.271 236 125 7 154 353 68 290 1.55e-13 72.4
MsG0380015362.01.T01 MTR_1g083750 27.315 216 125 5 148 348 62 260 4.45e-13 70.9
MsG0380015362.01.T01 MTR_7g021530 29.545 264 128 9 131 344 65 320 4.90e-13 70.1
MsG0380015362.01.T01 MTR_3g032660 25.847 236 126 7 154 353 68 290 6.52e-13 70.5
MsG0380015362.01.T01 MTR_7g021530 29.545 264 128 9 131 344 106 361 7.05e-13 70.1
MsG0380015362.01.T01 MTR_7g090550 26.246 301 156 13 154 408 70 350 9.94e-13 70.1
MsG0380015362.01.T01 MTR_7g060770 23.208 293 178 8 154 408 263 546 6.99e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015362.01.T01 AT2G29380 58.924 353 131 6 64 410 18 362 9.32e-142 409
MsG0380015362.01.T01 AT1G07430 62.539 323 89 5 122 414 119 439 2.95e-141 410
MsG0380015362.01.T01 AT3G11410 58.191 409 139 10 32 418 1 399 8.53e-138 400
MsG0380015362.01.T01 AT5G59220 65.161 310 87 4 119 411 107 412 2.96e-122 361
MsG0380015362.01.T01 AT5G51760 50.313 320 123 7 117 409 72 382 7.96e-92 282
MsG0380015362.01.T01 AT5G51760 50.313 320 123 7 117 409 102 412 2.63e-91 282
MsG0380015362.01.T01 AT4G26080 45.190 343 145 6 105 420 108 434 7.61e-89 276
MsG0380015362.01.T01 AT5G57050 44.199 362 158 6 89 420 36 383 1.26e-88 274
MsG0380015362.01.T01 AT5G57050 44.199 362 158 6 89 420 76 423 2.12e-88 275
MsG0380015362.01.T01 AT5G59220 66.495 194 55 3 119 306 107 296 5.84e-87 267
MsG0380015362.01.T01 AT1G17550 45.373 335 147 7 116 418 181 511 6.81e-83 263
MsG0380015362.01.T01 AT1G17550 45.373 335 147 7 116 418 181 511 6.81e-83 263
MsG0380015362.01.T01 AT1G72770 43.598 328 152 4 116 413 182 506 7.25e-80 255
MsG0380015362.01.T01 AT1G72770 43.598 328 152 4 116 413 182 506 7.25e-80 255
MsG0380015362.01.T01 AT1G72770 43.598 328 152 4 116 413 182 506 7.25e-80 255
MsG0380015362.01.T01 AT5G57050 43.775 249 98 5 89 310 76 309 1.34e-56 189
MsG0380015362.01.T01 AT5G53140 35.906 298 150 4 125 421 103 360 1.30e-46 166
MsG0380015362.01.T01 AT5G53140 35.906 298 150 4 125 421 103 360 1.30e-46 166
MsG0380015362.01.T01 AT1G67820 40.417 240 125 2 124 362 85 307 6.46e-46 164
MsG0380015362.01.T01 AT1G67820 40.417 240 125 2 124 362 121 343 1.50e-45 163
MsG0380015362.01.T01 AT1G72770 40.090 222 104 2 116 308 182 403 2.76e-45 162
MsG0380015362.01.T01 AT1G72770 40.090 222 104 2 116 308 182 403 2.76e-45 162
MsG0380015362.01.T01 AT4G31750 35.640 289 147 4 124 412 34 283 4.33e-44 156
MsG0380015362.01.T01 AT4G31750 35.294 289 148 3 124 412 34 283 4.35e-44 156
MsG0380015362.01.T01 AT4G31750 35.294 289 148 3 124 412 34 283 4.35e-44 156
MsG0380015362.01.T01 AT5G24940 39.565 230 123 2 124 353 34 247 9.08e-44 159
MsG0380015362.01.T01 AT5G10740 33.766 308 165 4 99 406 9 277 3.40e-43 155
MsG0380015362.01.T01 AT5G10740 33.766 308 165 4 99 406 9 277 3.40e-43 155
MsG0380015362.01.T01 AT1G43900 40.598 234 114 5 124 353 124 336 8.52e-43 154
MsG0380015362.01.T01 AT2G30020 36.170 282 144 6 131 410 147 394 4.31e-39 145
MsG0380015362.01.T01 AT2G40180 34.783 299 155 8 117 409 122 386 2.91e-38 142
MsG0380015362.01.T01 AT2G40860 33.910 289 154 9 125 409 296 551 3.05e-35 137
MsG0380015362.01.T01 AT1G07160 33.101 287 157 6 125 408 122 376 5.40e-35 133
MsG0380015362.01.T01 AT2G40860 33.910 289 154 9 125 409 394 649 7.77e-35 137
MsG0380015362.01.T01 AT2G40860 34.746 236 141 5 125 357 394 619 1.58e-32 130
MsG0380015362.01.T01 AT1G48040 33.935 277 132 8 145 406 107 347 2.04e-31 124
MsG0380015362.01.T01 AT2G25620 30.769 325 162 9 111 409 70 357 5.57e-31 122
MsG0380015362.01.T01 AT2G25620 30.769 325 162 9 111 409 70 357 5.57e-31 122
MsG0380015362.01.T01 AT3G15260 33.218 289 147 8 125 409 43 289 2.16e-29 116
MsG0380015362.01.T01 AT3G15260 33.218 289 147 8 125 409 43 289 2.16e-29 116
MsG0380015362.01.T01 AT3G51470 33.977 259 126 8 154 406 62 281 4.76e-29 115
MsG0380015362.01.T01 AT3G51470 34.363 259 125 8 154 406 106 325 6.64e-29 116
MsG0380015362.01.T01 AT3G17250 32.979 282 118 7 151 406 155 391 1.89e-28 116
MsG0380015362.01.T01 AT2G25070 30.714 280 143 9 123 359 23 294 7.99e-28 113
MsG0380015362.01.T01 AT2G25070 30.714 280 143 9 123 359 23 294 7.99e-28 113
MsG0380015362.01.T01 AT4G31860 32.075 265 131 7 123 345 23 280 2.43e-27 110
MsG0380015362.01.T01 AT3G62260 31.683 303 139 11 131 406 85 346 8.29e-27 111
MsG0380015362.01.T01 AT3G62260 31.683 303 139 11 131 406 86 347 8.57e-27 111
MsG0380015362.01.T01 AT4G31860 30.824 279 144 7 123 359 23 294 8.69e-27 110
MsG0380015362.01.T01 AT1G78200 29.904 311 165 10 108 409 17 283 9.72e-27 108
MsG0380015362.01.T01 AT1G78200 29.904 311 165 10 108 409 17 283 9.72e-27 108
MsG0380015362.01.T01 AT1G78200 29.904 311 165 10 108 409 17 283 9.72e-27 108
MsG0380015362.01.T01 AT4G31860 32.308 260 127 7 123 340 23 275 1.03e-26 108
MsG0380015362.01.T01 AT2G33700 31.274 259 133 8 154 406 123 342 2.46e-26 109
MsG0380015362.01.T01 AT3G62260 32.028 281 143 8 139 406 12 257 4.78e-26 107
MsG0380015362.01.T01 AT1G78200 30.851 282 143 9 136 409 1 238 6.83e-26 105
MsG0380015362.01.T01 AT1G78200 30.851 282 143 9 136 409 1 238 6.83e-26 105
MsG0380015362.01.T01 AT3G16800 29.874 318 189 12 59 353 3 309 7.14e-26 107
MsG0380015362.01.T01 AT3G16800 29.874 318 189 12 59 353 3 309 7.14e-26 107
MsG0380015362.01.T01 AT3G16800 29.874 318 189 12 59 353 3 309 7.14e-26 107
MsG0380015362.01.T01 AT2G34740 31.786 280 138 9 136 408 101 334 7.81e-26 107
MsG0380015362.01.T01 AT1G34750 32.203 295 146 10 123 409 34 282 1.85e-25 105
MsG0380015362.01.T01 AT1G34750 32.203 295 146 10 123 409 34 282 1.85e-25 105
MsG0380015362.01.T01 AT1G34750 32.203 295 146 10 123 409 34 282 1.85e-25 105
MsG0380015362.01.T01 AT5G26010 33.913 230 112 7 156 359 75 290 7.25e-25 104
MsG0380015362.01.T01 AT4G28400 33.484 221 125 6 136 353 27 228 8.36e-25 103
MsG0380015362.01.T01 AT1G22280 29.530 298 164 8 119 409 29 287 1.03e-24 103
MsG0380015362.01.T01 AT4G28400 33.484 221 125 6 136 353 49 250 1.14e-24 103
MsG0380015362.01.T01 AT4G32950 32.389 247 132 9 126 352 45 276 1.46e-24 103
MsG0380015362.01.T01 AT3G05640 34.630 257 129 10 126 352 62 309 3.66e-24 103
MsG0380015362.01.T01 AT3G05640 34.630 257 129 10 126 352 62 309 3.66e-24 103
MsG0380015362.01.T01 AT3G05640 34.630 257 129 10 126 352 62 309 3.66e-24 103
MsG0380015362.01.T01 AT2G40860 34.272 213 125 6 125 333 394 595 1.66e-23 103
MsG0380015362.01.T01 AT5G27930 31.761 318 182 11 64 352 3 314 2.24e-23 101
MsG0380015362.01.T01 AT5G27930 31.761 318 182 11 64 352 3 314 2.24e-23 101
MsG0380015362.01.T01 AT1G22280 29.492 295 162 8 119 409 29 281 4.76e-23 98.6
MsG0380015362.01.T01 AT2G20630 32.579 221 127 6 136 353 45 246 5.02e-23 98.6
MsG0380015362.01.T01 AT2G20630 32.579 221 127 6 136 353 45 246 8.69e-23 98.2
MsG0380015362.01.T01 AT2G34740 34.579 214 110 7 136 342 115 305 1.24e-22 98.2
MsG0380015362.01.T01 AT2G34740 34.579 214 110 7 136 342 97 287 1.59e-22 97.8
MsG0380015362.01.T01 AT4G28400 33.333 210 118 6 136 342 49 239 2.25e-22 95.9
MsG0380015362.01.T01 AT1G34750 33.621 232 127 8 123 349 34 243 1.17e-21 94.0
MsG0380015362.01.T01 AT5G01700 32.000 250 141 9 131 355 6 251 1.61e-21 95.1
MsG0380015362.01.T01 AT4G27800 27.356 329 161 9 123 410 59 350 2.16e-21 95.5
MsG0380015362.01.T01 AT5G01700 32.000 250 141 9 131 355 55 300 2.73e-21 95.1
MsG0380015362.01.T01 AT3G16800 40.714 140 66 4 231 353 75 214 6.18e-21 92.0
MsG0380015362.01.T01 AT3G16800 40.714 140 66 4 231 353 75 214 6.18e-21 92.0
MsG0380015362.01.T01 AT4G08260 29.710 276 127 9 136 410 1 210 9.63e-21 90.5
MsG0380015362.01.T01 AT4G03415 31.985 272 121 9 131 352 75 332 4.12e-20 92.8
MsG0380015362.01.T01 AT4G03415 31.985 272 121 9 131 352 75 332 4.12e-20 92.8
MsG0380015362.01.T01 AT4G03415 31.985 272 121 9 131 352 75 332 4.12e-20 92.8
MsG0380015362.01.T01 AT4G11040 28.328 293 120 12 125 409 80 290 5.28e-20 90.1
MsG0380015362.01.T01 AT1G18030 30.120 249 137 8 131 357 82 315 6.13e-20 90.9
MsG0380015362.01.T01 AT4G32950 31.197 234 126 9 126 339 45 263 9.51e-20 89.4
MsG0380015362.01.T01 AT2G20050 31.890 254 115 13 137 352 126 359 1.10e-19 92.4
MsG0380015362.01.T01 AT2G20050 31.890 254 115 13 137 352 126 359 1.11e-19 92.4
MsG0380015362.01.T01 AT1G79630 28.772 285 140 7 131 352 75 359 6.08e-19 89.4
MsG0380015362.01.T01 AT1G79630 29.123 285 139 8 131 352 71 355 6.45e-19 89.4
MsG0380015362.01.T01 AT1G79630 40.000 145 71 4 224 352 105 249 8.98e-19 88.2
MsG0380015362.01.T01 AT1G79630 40.000 145 71 4 224 352 105 249 8.98e-19 88.2
MsG0380015362.01.T01 AT1G79630 40.000 145 71 4 224 352 105 249 8.98e-19 88.2
MsG0380015362.01.T01 AT1G79630 40.000 145 71 4 224 352 105 249 8.98e-19 88.2
MsG0380015362.01.T01 AT1G03590 30.483 269 126 9 131 352 68 322 1.22e-18 88.2
MsG0380015362.01.T01 AT1G16220 34.328 201 100 6 224 408 192 376 1.23e-18 88.2
MsG0380015362.01.T01 AT1G79630 40.000 145 71 4 224 352 145 289 1.25e-18 87.8
MsG0380015362.01.T01 AT1G79630 40.000 145 71 4 224 352 145 289 1.25e-18 87.8
MsG0380015362.01.T01 AT4G33920 26.885 305 168 8 154 419 61 349 1.56e-18 87.0
MsG0380015362.01.T01 AT3G55050 26.846 298 154 10 154 409 84 359 1.83e-18 87.0
MsG0380015362.01.T01 AT3G55050 26.846 298 154 10 154 409 84 359 1.83e-18 87.0
MsG0380015362.01.T01 AT3G02750 34.031 191 99 6 178 352 174 353 2.91e-18 87.0
MsG0380015362.01.T01 AT3G02750 34.031 191 99 6 178 352 174 353 2.91e-18 87.0
MsG0380015362.01.T01 AT1G09160 29.954 217 120 6 152 353 66 265 2.96e-18 86.7
MsG0380015362.01.T01 AT1G09160 29.954 217 120 6 152 353 66 265 2.96e-18 86.7
MsG0380015362.01.T01 AT4G27800 27.536 276 141 7 123 357 59 316 4.22e-18 85.1
MsG0380015362.01.T01 AT4G27800 27.536 276 141 7 123 357 59 316 5.53e-18 85.1
MsG0380015362.01.T01 AT5G02760 27.931 290 157 12 154 408 72 344 9.43e-18 84.7
MsG0380015362.01.T01 AT3G63320 35.152 165 61 5 231 349 85 249 1.09e-17 84.7
MsG0380015362.01.T01 AT1G18030 29.492 295 147 11 91 342 24 300 1.15e-17 83.6
MsG0380015362.01.T01 AT3G27140 29.091 275 108 7 136 409 1 189 2.31e-17 81.6
MsG0380015362.01.T01 AT3G63320 29.278 263 116 9 156 349 71 332 2.32e-17 84.0
MsG0380015362.01.T01 AT3G12620 26.897 290 162 10 154 408 83 357 7.37e-17 82.4
MsG0380015362.01.T01 AT3G12620 26.897 290 162 10 154 408 83 357 7.37e-17 82.4
MsG0380015362.01.T01 AT4G33920 30.000 230 123 5 225 419 40 266 8.55e-17 80.9
MsG0380015362.01.T01 AT5G36250 28.782 271 143 10 131 352 75 344 1.02e-16 82.4
MsG0380015362.01.T01 AT4G33920 30.000 230 123 5 225 419 10 236 1.69e-16 79.7
MsG0380015362.01.T01 AT3G06270 28.458 253 131 9 134 352 68 304 3.23e-16 80.1
MsG0380015362.01.T01 AT5G66080 27.922 308 155 11 145 408 72 356 6.79e-16 79.3
MsG0380015362.01.T01 AT3G51370 25.466 322 148 13 154 420 79 363 4.91e-15 76.6
MsG0380015362.01.T01 AT3G51370 25.466 322 148 13 154 420 79 363 4.91e-15 76.6
MsG0380015362.01.T01 AT3G63340 29.694 229 100 7 231 411 233 448 8.45e-15 77.0
MsG0380015362.01.T01 AT3G63340 29.694 229 100 7 231 411 233 448 9.43e-15 77.0
MsG0380015362.01.T01 AT3G63340 29.694 229 100 7 231 411 233 448 9.43e-15 77.0
MsG0380015362.01.T01 AT3G63340 29.694 229 100 7 231 411 233 448 9.43e-15 77.0
MsG0380015362.01.T01 AT3G63340 29.694 229 100 7 231 411 233 448 9.43e-15 77.0
MsG0380015362.01.T01 AT3G63340 29.694 229 100 7 231 411 233 448 1.03e-14 77.0
MsG0380015362.01.T01 AT3G63340 29.694 229 100 7 231 411 233 448 1.19e-14 76.3
MsG0380015362.01.T01 AT3G63340 29.130 230 100 7 231 411 233 448 1.24e-14 76.6
MsG0380015362.01.T01 AT3G63340 29.130 230 100 7 231 411 233 448 1.24e-14 76.6
MsG0380015362.01.T01 AT4G38520 27.642 246 116 8 151 353 77 303 1.26e-14 75.5
MsG0380015362.01.T01 AT4G38520 27.642 246 116 8 151 353 77 303 1.26e-14 75.5
MsG0380015362.01.T01 AT3G63340 29.130 230 100 7 231 411 233 448 1.27e-14 76.6
MsG0380015362.01.T01 AT1G68410 29.876 241 130 8 134 353 48 270 2.13e-14 75.1
MsG0380015362.01.T01 AT1G68410 29.876 241 130 8 134 353 48 270 2.13e-14 75.1
MsG0380015362.01.T01 AT1G68410 29.876 241 130 8 134 353 48 270 2.13e-14 75.1
MsG0380015362.01.T01 AT1G68410 29.876 241 130 8 134 353 48 270 2.13e-14 75.1
MsG0380015362.01.T01 AT3G16560 29.565 230 117 7 225 418 270 490 2.20e-14 75.5
MsG0380015362.01.T01 AT3G16560 29.565 230 117 7 225 418 270 490 2.20e-14 75.5
MsG0380015362.01.T01 AT3G16560 29.565 230 117 7 225 418 270 490 2.20e-14 75.5
MsG0380015362.01.T01 AT5G66080 30.396 227 101 8 225 408 40 252 3.17e-14 73.2
MsG0380015362.01.T01 AT3G51370 28.992 238 110 8 225 419 56 277 4.15e-14 73.2
MsG0380015362.01.T01 AT5G36250 28.309 272 144 11 131 352 75 345 6.46e-14 73.2
MsG0380015362.01.T01 AT2G05050 38.095 126 56 5 286 410 87 191 9.33e-14 70.1
MsG0380015362.01.T01 AT5G36250 27.368 285 143 11 131 352 75 358 1.53e-13 72.4
MsG0380015362.01.T01 AT3G63340 35.032 157 82 6 261 411 339 481 1.65e-12 70.1
MsG0380015362.01.T01 AT1G47380 29.717 212 117 6 152 348 62 256 2.49e-12 68.6
MsG0380015362.01.T01 AT3G16560 31.875 160 73 4 225 353 270 424 4.43e-12 68.2

Find 111 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAATTAATCAATTAATTA+AGG 0.136334 3:+69051162 MsG0380015362.01.T01:three_prime_UTR
TCCCTCCCGGCGCCGGAATT+TGG 0.164906 3:+69049879 MsG0380015362.01.T01:CDS
TTAATTAATTTAATTATTCT+TGG 0.221369 3:-69051148 None:intergenic
ACTGAAGTAACACCGAATTT+TGG 0.230737 3:-69050093 None:intergenic
CTGGAGGGCGCGTGATCTAT+TGG 0.235228 3:+69050664 MsG0380015362.01.T01:CDS
CAACGAAGCACAAGAGAATT+TGG 0.235589 3:+69050362 MsG0380015362.01.T01:CDS
CGAAATCGAATCTATAAAAT+TGG 0.242737 3:+69051447 MsG0380015362.01.T01:three_prime_UTR
ATGTAATGGGATGGGAATTT+AGG 0.269328 3:+69051279 MsG0380015362.01.T01:three_prime_UTR
CAGAAGCTGCCGTCGCTGCC+GGG 0.306318 3:+69050970 MsG0380015362.01.T01:CDS
CCGGCGTTTCCGTGAAGTTC+CGG 0.323958 3:-69049938 None:intergenic
TCCTAGCGAGTGATGGACTA+TGG 0.324174 3:+69050893 MsG0380015362.01.T01:CDS
GCAGAAGCTGCCGTCGCTGC+CGG 0.328125 3:+69050969 MsG0380015362.01.T01:CDS
TTAATTAATCAATTAATTAA+GGG 0.339918 3:+69051163 MsG0380015362.01.T01:three_prime_UTR
CCTTCTTAAGATCTGGTTGC+CGG 0.378935 3:-69049957 None:intergenic
CAACAAAGGTATTAATTAAC+CGG 0.381726 3:+69051398 MsG0380015362.01.T01:three_prime_UTR
TTGTGGTAGAAGAAGAGATA+TGG 0.384132 3:+69050116 MsG0380015362.01.T01:CDS
TTTGTTGACTAAGTTGGCTT+TGG 0.390758 3:+69051053 MsG0380015362.01.T01:CDS
GGCTTTGGCAAGACATAGTT+CGG 0.395382 3:+69051068 MsG0380015362.01.T01:CDS
TGGAGGGCGCGTGATCTATT+GGG 0.410207 3:+69050665 MsG0380015362.01.T01:CDS
CACATCTACATGTAACAGTT+TGG 0.412786 3:-69050455 None:intergenic
TCGAAATCCTTCTTAAGATC+TGG 0.418009 3:-69049964 None:intergenic
TCAATTATCATGTAATGTAA+TGG 0.418524 3:+69051265 MsG0380015362.01.T01:three_prime_UTR
TGACGACGGATGGTTCTGAT+AGG 0.419384 3:+69051010 MsG0380015362.01.T01:CDS
TGGGATGGTCCTAGAGTCCT+TGG 0.438290 3:+69050684 MsG0380015362.01.T01:CDS
TCCGGTGTCCCCGGCAGCGA+CGG 0.443630 3:-69050979 None:intergenic
GTTGAAGAGTGTCCAAAATT+CGG 0.449606 3:+69050081 MsG0380015362.01.T01:CDS
TACATTACATGATAATTGAC+AGG 0.451396 3:-69051261 None:intergenic
TTAATTAAGGGCGGTGAGAA+AGG 0.453120 3:+69051175 MsG0380015362.01.T01:three_prime_UTR
CAATTATCATGTAATGTAAT+GGG 0.453575 3:+69051266 MsG0380015362.01.T01:three_prime_UTR
TTCGGTGTTACTTCAGTTTG+TGG 0.455399 3:+69050099 MsG0380015362.01.T01:CDS
AGATATGGAAGATTCAGTTT+CGG 0.464045 3:+69050131 MsG0380015362.01.T01:CDS
TCCAAATTCCGGCGCCGGGA+GGG 0.471151 3:-69049880 None:intergenic
GGTTCTTGTGAAGAGAAAGA+AGG 0.475214 3:-69050159 None:intergenic
GCCCTCCAGCCGCTTCGACT+CGG 0.483374 3:-69050650 None:intergenic
GCAACAAGGCTTTGCTCGCA+TGG 0.484219 3:+69050401 MsG0380015362.01.T01:CDS
TTGCTCCGAGTCGAAGCGGC+TGG 0.488328 3:+69050645 MsG0380015362.01.T01:CDS
GTGTGGTGGTGATTGATTTG+AGG 0.488649 3:+69051100 MsG0380015362.01.T01:CDS
AGCAATTCATCGGGTCGATC+CGG 0.489756 3:-69050627 None:intergenic
TTCGACTCGGAGCAATTCAT+CGG 0.491804 3:-69050637 None:intergenic
ACAAAGAAACGTGTGTCAAC+CGG 0.493597 3:-69051417 None:intergenic
AGAAGCTGCCGTCGCTGCCG+GGG 0.499181 3:+69050971 MsG0380015362.01.T01:CDS
GTTCACGTCCCTCCCGGCGC+CGG 0.501266 3:+69049872 MsG0380015362.01.T01:CDS
ATGGTAGTAAGTCCAAATTC+CGG 0.501602 3:-69049891 None:intergenic
CTCCGAGTCGAAGCGGCTGG+AGG 0.504826 3:+69050648 MsG0380015362.01.T01:CDS
TACATCGCCGACATGGCGTC+CGG 0.508772 3:+69049919 MsG0380015362.01.T01:CDS
GCCGTCGCTGCCGGGGACAC+CGG 0.510962 3:+69050978 MsG0380015362.01.T01:CDS
TCTTTCCTCCGATCATAAGC+CGG 0.517809 3:+69050608 MsG0380015362.01.T01:CDS
TATCATGTAATGTAATGGGA+TGG 0.519697 3:+69051270 MsG0380015362.01.T01:three_prime_UTR
TGTTGTAAGGATGTGTTTGA+AGG 0.522883 3:+69050945 MsG0380015362.01.T01:CDS
TAAGTCCAAATTCCGGCGCC+GGG 0.526065 3:-69049884 None:intergenic
CGTTCCGTTACCGTTACCTC+AGG 0.527905 3:-69050847 None:intergenic
GAGGAATAGCAACGCCGCTA+CGG 0.531063 3:-69050587 None:intergenic
TCAGGCTCAGATATCACATA+AGG 0.533412 3:-69050829 None:intergenic
CTTGCCATGTCTAGAGCCAT+AGG 0.533980 3:+69050711 MsG0380015362.01.T01:CDS
GTAAGTCCAAATTCCGGCGC+CGG 0.536382 3:-69049885 None:intergenic
GGAATGTGTTGTGGTGTTGT+CGG 0.536644 3:+69049829 MsG0380015362.01.T01:CDS
CGGCGAGTTCACGTCCCTCC+CGG 0.540502 3:+69049866 MsG0380015362.01.T01:CDS
ACACTGCTTGTGGTGTTGTA+AGG 0.543623 3:+69050932 MsG0380015362.01.T01:CDS
ACATGGCGTCCGGAACTTCA+CGG 0.545909 3:+69049929 MsG0380015362.01.T01:CDS
ATCATGTAATGTAATGGGAT+GGG 0.548896 3:+69051271 MsG0380015362.01.T01:three_prime_UTR
TGTTGTGGTGTTGTCGGAGA+AGG 0.549714 3:+69049835 MsG0380015362.01.T01:CDS
GCTGCATCATCAGAAGCTGC+AGG 0.550527 3:-69047669 None:intergenic
TCCGAGTCGAAGCGGCTGGA+GGG 0.554311 3:+69050649 MsG0380015362.01.T01:CDS
TGGACGATGAAGTTCAAAGA+TGG 0.557447 3:+69050421 MsG0380015362.01.T01:CDS
AAAACACCGAAGTAGTGAAA+AGG 0.560512 3:-69050180 None:intergenic
ACTCCTCACTGTGATGCTGT+TGG 0.560714 3:+69050486 MsG0380015362.01.T01:CDS
TGAAGTTCCGGACGCCATGT+CGG 0.562217 3:-69049926 None:intergenic
GCAAGTACTCCAAGGACTCT+AGG 0.564501 3:-69050693 None:intergenic
ATTATGGCTGGAATGTGTTG+TGG 0.564647 3:+69049820 MsG0380015362.01.T01:CDS
TCGACTCGGAGCAATTCATC+GGG 0.565795 3:-69050636 None:intergenic
AAAATTATCGTCTCAAACTG+TGG 0.567276 3:+69050543 MsG0380015362.01.T01:CDS
AGTCAACAAAATTGAAGCAT+CGG 0.571417 3:-69051040 None:intergenic
TGGTGAAATGGCTTCTGATG+AGG 0.574708 3:+69047611 None:intergenic
ATGTCGGCGATGTATTTGAA+TGG 0.578204 3:-69049910 None:intergenic
GAAAACGAGGTGACGACGGA+TGG 0.579693 3:+69051000 MsG0380015362.01.T01:CDS
GGGTCGATCCGGCTTATGAT+CGG 0.579727 3:-69050616 None:intergenic
ATTCAAATACATCGCCGACA+TGG 0.580427 3:+69049912 MsG0380015362.01.T01:CDS
AACGCCGCTACGGCAAAGAA+CGG 0.583085 3:-69050577 None:intergenic
GATATCTGAGCCTGAGGTAA+CGG 0.584421 3:+69050837 MsG0380015362.01.T01:CDS
CGGGAGGGACGTGAACTCGC+CGG 0.591475 3:-69049865 None:intergenic
GGGAAAATTTGTGTCAACAA+AGG 0.594315 3:+69051384 MsG0380015362.01.T01:three_prime_UTR
GGCTTATGATCGGAGGAAAG+AGG 0.597269 3:-69050606 None:intergenic
GTCCAAATTCCGGCGCCGGG+AGG 0.598614 3:-69049881 None:intergenic
CCCATAGTCCATCACTCGCT+AGG 0.599236 3:-69050894 None:intergenic
CTCACCTATGGCTCTAGACA+TGG 0.599722 3:-69050715 None:intergenic
CCGGCAACCAGATCTTAAGA+AGG 0.602537 3:+69049957 MsG0380015362.01.T01:CDS
AAGACTTCATGAAATTGTGA+AGG 0.603649 3:+69050332 MsG0380015362.01.T01:CDS
CCTAGCGAGTGATGGACTAT+GGG 0.603792 3:+69050894 MsG0380015362.01.T01:CDS
GACGACGGATGGTTCTGATA+GGG 0.604150 3:+69051011 MsG0380015362.01.T01:CDS
TGTCGGAGAAGGTGACTCAC+CGG 0.606589 3:+69049846 MsG0380015362.01.T01:CDS
AGAGCCGTTCTTTGCCGTAG+CGG 0.606690 3:+69050573 MsG0380015362.01.T01:CDS
TGAGCCTGAGGTAACGGTAA+CGG 0.607863 3:+69050843 MsG0380015362.01.T01:CDS
TGTTTGATCCTAGCGAGTGA+TGG 0.608748 3:+69050886 MsG0380015362.01.T01:CDS
AGGATGTGGAGAAAATGGAA+TGG 0.611587 3:+69051223 MsG0380015362.01.T01:three_prime_UTR
ACCGGAAAACGAGGTGACGA+CGG 0.614531 3:+69050996 MsG0380015362.01.T01:CDS
ATTAATCAATTAATTAAGGG+CGG 0.618802 3:+69051166 MsG0380015362.01.T01:three_prime_UTR
CCGGAACTTCACGGAAACGC+CGG 0.619818 3:+69049938 MsG0380015362.01.T01:CDS
GACAACAGCAACAACAGCTG+TGG 0.622902 3:-69050511 None:intergenic
TTATGTGATATCTGAGCCTG+AGG 0.624755 3:+69050831 MsG0380015362.01.T01:CDS
TAGACATGGCAAGTACTCCA+AGG 0.628683 3:-69050701 None:intergenic
GGGCGCGTGATCTATTGGGA+TGG 0.628862 3:+69050669 MsG0380015362.01.T01:CDS
GCGAGCAAAGCCTTGTTGCA+TGG 0.634973 3:-69050397 None:intergenic
GCCGGGGACACCGGAAAACG+AGG 0.642141 3:+69050987 MsG0380015362.01.T01:CDS
TGAATTGCTCCGAGTCGAAG+CGG 0.644062 3:+69050641 MsG0380015362.01.T01:CDS
TGGAACAACACCATGCAACA+AGG 0.659515 3:+69050387 MsG0380015362.01.T01:CDS
TTCGGATAATGTTAGTGTGG+TGG 0.663276 3:+69051086 MsG0380015362.01.T01:CDS
TCGATCCGGCTTATGATCGG+AGG 0.674358 3:-69050613 None:intergenic
TAGTTCGGATAATGTTAGTG+TGG 0.677611 3:+69051083 MsG0380015362.01.T01:CDS
GTGTCAAACGACACTGCTTG+TGG 0.684871 3:+69050922 MsG0380015362.01.T01:CDS
AAGCACAAGAGAATTTGGAG+TGG 0.693390 3:+69050367 MsG0380015362.01.T01:CDS
GATCCAACAGCATCACAGTG+AGG 0.730432 3:-69050489 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAATTAGTGT+AGG + Chr3:69051363-69051382 MsG0380015362.01.T01:three_prime_UTR 10.0%
!! AAAAAAAAAAAATTAGTGTA+GGG + Chr3:69051364-69051383 MsG0380015362.01.T01:three_prime_UTR 10.0%
!! AACAAAAAATATATTAAAGT+TGG - Chr3:69049057-69049076 None:intergenic 10.0%
!!! CTTTTTAATAAGAATAAATA+AGG + Chr3:69049177-69049196 MsG0380015362.01.T01:intron 10.0%
!!! GTTATCTAAAATTAAATTAA+TGG + Chr3:69048406-69048425 MsG0380015362.01.T01:intron 10.0%
!!! TATTTATTATATTTCTCTTT+TGG - Chr3:69048721-69048740 None:intergenic 10.0%
!! AAAAGTAAATTATAGCAATT+CGG - Chr3:69049162-69049181 None:intergenic 15.0%
!! AATATGAAAAAAATGAATGA+AGG - Chr3:69049729-69049748 None:intergenic 15.0%
!! AGGTATTAAAAATTGTAAAT+TGG - Chr3:69047948-69047967 None:intergenic 15.0%
!! ATGATGTAACTTTATAATTA+TGG + Chr3:69047892-69047911 MsG0380015362.01.T01:intron 15.0%
!!! ATTGTTTAAGTTTTTCATTA+TGG + Chr3:69049804-69049823 MsG0380015362.01.T01:intron 15.0%
!!! TAATGAAATGAAACATTTTA+AGG + Chr3:69051203-69051222 MsG0380015362.01.T01:three_prime_UTR 15.0%
!!! TTTTATAAACATTTTTATCC+CGG - Chr3:69049288-69049307 None:intergenic 15.0%
!! AAATCATGAAAATACAAATC+AGG + Chr3:69048806-69048825 MsG0380015362.01.T01:intron 20.0%
!! ATGAGAAATGTTTATTTGTT+AGG - Chr3:69048851-69048870 None:intergenic 20.0%
!! ATTAATCAATTAATTAAGGG+CGG + Chr3:69051166-69051185 MsG0380015362.01.T01:three_prime_UTR 20.0%
!! CAATTATCATGTAATGTAAT+GGG + Chr3:69051266-69051285 MsG0380015362.01.T01:three_prime_UTR 20.0%
!! GTAAATTAATCACTCTTAAA+CGG - Chr3:69048031-69048050 None:intergenic 20.0%
!! TATGGAAAAAAAATTCAGTT+GGG - Chr3:69048094-69048113 None:intergenic 20.0%
!! TCAATTATCATGTAATGTAA+TGG + Chr3:69051265-69051284 MsG0380015362.01.T01:three_prime_UTR 20.0%
!! TTATAAAGTTACATCATCAT+TGG - Chr3:69047889-69047908 None:intergenic 20.0%
!! TTCAAAATATTAATCAACCT+TGG - Chr3:69048507-69048526 None:intergenic 20.0%
!! TTTCTTATAATAATGATCAG+AGG - Chr3:69048282-69048301 None:intergenic 20.0%
!!! CAAAATCTCAATTTTTTTTG+GGG + Chr3:69049128-69049147 MsG0380015362.01.T01:intron 20.0%
!!! GAATCTATAAAATTGGTTTT+TGG + Chr3:69051454-69051473 MsG0380015362.01.T01:three_prime_UTR 20.0%
!!! GCAAAATCTCAATTTTTTTT+GGG + Chr3:69049127-69049146 MsG0380015362.01.T01:intron 20.0%
!!! GTAAGTATTTTTCTTTTTTC+CGG + Chr3:69050225-69050244 MsG0380015362.01.T01:intron 20.0%
!!! TGCAAAATCTCAATTTTTTT+TGG + Chr3:69049126-69049145 MsG0380015362.01.T01:intron 20.0%
!!! TTATTTGTTAGGATTGATTA+GGG - Chr3:69048840-69048859 None:intergenic 20.0%
!!! TTTATTTGTTAGGATTGATT+AGG - Chr3:69048841-69048860 None:intergenic 20.0%
!!! TTTTCTAGATATATTTCACT+CGG - Chr3:69048203-69048222 None:intergenic 20.0%
! AAAGAAAAATCTTCAACAGA+AGG + Chr3:69050048-69050067 MsG0380015362.01.T01:CDS 25.0%
! AACGTAGTAAAGTTTGAAAA+CGG + Chr3:69049375-69049394 MsG0380015362.01.T01:intron 25.0%
! AATAACGAGATATACAGATT+AGG + Chr3:69048743-69048762 MsG0380015362.01.T01:intron 25.0%
! ATTGTCTTGAATTATGCTTA+TGG + Chr3:69049240-69049259 MsG0380015362.01.T01:intron 25.0%
! CAAAAGTAAGAAAAACAAGA+AGG + Chr3:69050020-69050039 MsG0380015362.01.T01:CDS 25.0%
! CAATGTATTGTTATATGTAG+AGG - Chr3:69049224-69049243 None:intergenic 25.0%
! CGAAATCGAATCTATAAAAT+TGG + Chr3:69051447-69051466 MsG0380015362.01.T01:three_prime_UTR 25.0%
! GAAAAAAATGAATGAAGGAA+CGG - Chr3:69049724-69049743 None:intergenic 25.0%
! GATAATCAGATGCATTAATA+TGG - Chr3:69048317-69048336 None:intergenic 25.0%
! GTATGGAAAAAAAATTCAGT+TGG - Chr3:69048095-69048114 None:intergenic 25.0%
! GTTATCATCAAAACTCTTTA+AGG + Chr3:69047969-69047988 MsG0380015362.01.T01:intron 25.0%
! TAATATTTGTTCAAGTGTAC+AGG - Chr3:69047919-69047938 None:intergenic 25.0%
! TACATTACATGATAATTGAC+AGG - Chr3:69051264-69051283 None:intergenic 25.0%
! TTATAATAATGATCAGAGGT+AGG - Chr3:69048278-69048297 None:intergenic 25.0%
! TTTGTTAAAATACTCACCTA+TGG - Chr3:69050730-69050749 None:intergenic 25.0%
!! AACAACAAAAATTTGAAGCT+TGG - Chr3:69047837-69047856 None:intergenic 25.0%
!! ATTTTTATCCCGGATTAAAT+TGG - Chr3:69049278-69049297 None:intergenic 25.0%
!! GTTTTTGTTCTATGAACTAT+TGG + Chr3:69051504-69051523 MsG0380015362.01.T01:three_prime_UTR 25.0%
!! TCTATGACATTTTTATGTGT+AGG + Chr3:69048573-69048592 MsG0380015362.01.T01:intron 25.0%
!!! AAAGAGTTTTGATGATAACA+AGG - Chr3:69047968-69047987 None:intergenic 25.0%
!!! AATGAAACATTTTAAGGATG+TGG + Chr3:69051209-69051228 MsG0380015362.01.T01:three_prime_UTR 25.0%
!!! ATGTTTGTATTCTTTTTTGC+AGG + Chr3:69050790-69050809 MsG0380015362.01.T01:intron 25.0%
!!! CAACAAAGGTATTAATTAAC+CGG + Chr3:69051398-69051417 MsG0380015362.01.T01:three_prime_UTR 25.0%
!!! CTATAAAATTGGTTTTTGGT+TGG + Chr3:69051458-69051477 MsG0380015362.01.T01:three_prime_UTR 25.0%
!!! GCTTTGTTGTTAATTTTTTC+AGG + Chr3:69050290-69050309 MsG0380015362.01.T01:intron 25.0%
!!! TCAATGGGTAGTTTTTTTTA+TGG + Chr3:69048471-69048490 MsG0380015362.01.T01:intron 25.0%
!!! TTCAATTTTGTTGACTAAGT+TGG + Chr3:69051047-69051066 MsG0380015362.01.T01:CDS 25.0%
!!! TTTAAGTTTTTCATTATGGC+TGG + Chr3:69049808-69049827 MsG0380015362.01.T01:intron 25.0%
AAAAAAAATTCAGTTGGGAG+GGG - Chr3:69048089-69048108 None:intergenic 30.0%
AAAATTATCGTCTCAAACTG+TGG + Chr3:69050543-69050562 MsG0380015362.01.T01:CDS 30.0%
AAGACTTCATGAAATTGTGA+AGG + Chr3:69050332-69050351 MsG0380015362.01.T01:CDS 30.0%
AATGAGCAAATAAAGAGCTA+TGG - Chr3:69047861-69047880 None:intergenic 30.0%
ACGAGGAAAGAAATTGATAT+TGG - Chr3:69048530-69048549 None:intergenic 30.0%
ACTCAAATTGTATTTGGATC+AGG - Chr3:69048780-69048799 None:intergenic 30.0%
AGATATGGAAGATTCAGTTT+CGG + Chr3:69050131-69050150 MsG0380015362.01.T01:CDS 30.0%
AGTCAACAAAATTGAAGCAT+CGG - Chr3:69051043-69051062 None:intergenic 30.0%
ATGTCCACTCAAATTGTATT+TGG - Chr3:69048786-69048805 None:intergenic 30.0%
ATTTACGCTAGAAAACTTGT+AGG + Chr3:69048045-69048064 MsG0380015362.01.T01:intron 30.0%
CACTTGAATCAATCCATTAT+TGG + Chr3:69048174-69048193 MsG0380015362.01.T01:intron 30.0%
CCGAAAATTCCAATTTAATC+CGG + Chr3:69049266-69049285 MsG0380015362.01.T01:intron 30.0%
CGAAAATTCCAATTTAATCC+GGG + Chr3:69049267-69049286 MsG0380015362.01.T01:intron 30.0%
CTTTCCTCGTAATTTAATCT+CGG + Chr3:69048540-69048559 MsG0380015362.01.T01:intron 30.0%
GAAAAAAAATTCAGTTGGGA+GGG - Chr3:69048090-69048109 None:intergenic 30.0%
GTGGTATAAACTTCACATTA+AGG - Chr3:69048450-69048469 None:intergenic 30.0%
TAGTAAAGTTTGAAAACGGA+GGG + Chr3:69049379-69049398 MsG0380015362.01.T01:intron 30.0%
TCATGAAAATACAAATCAGG+TGG + Chr3:69048809-69048828 MsG0380015362.01.T01:intron 30.0%
TGATCCAAATACAATTTGAG+TGG + Chr3:69048779-69048798 MsG0380015362.01.T01:intron 30.0%
TTATCCGAGATTAAATTACG+AGG - Chr3:69048547-69048566 None:intergenic 30.0%
TTTACGCTAGAAAACTTGTA+GGG + Chr3:69048046-69048065 MsG0380015362.01.T01:intron 30.0%
! ATCATGTAATGTAATGGGAT+GGG + Chr3:69051271-69051290 MsG0380015362.01.T01:three_prime_UTR 30.0%
! CCGGATTAAATTGGAATTTT+CGG - Chr3:69049269-69049288 None:intergenic 30.0%
! TATCATGTAATGTAATGGGA+TGG + Chr3:69051270-69051289 MsG0380015362.01.T01:three_prime_UTR 30.0%
! TCTAAACCTAGTTTGTCATA+TGG - Chr3:69048948-69048967 None:intergenic 30.0%
! TGACAAACTAGGTTTAGAAT+TGG + Chr3:69048950-69048969 MsG0380015362.01.T01:intron 30.0%
!! CAATAATGGATTGATTCAAG+TGG - Chr3:69048176-69048195 None:intergenic 30.0%
!! TTTGAGACGATAATTTTGTC+TGG - Chr3:69050540-69050559 None:intergenic 30.0%
!! TTTTAAGGATGTGGAGAAAA+TGG + Chr3:69051218-69051237 MsG0380015362.01.T01:three_prime_UTR 30.0%
!! TTTTAGAAAAAAGGAGTACG+TGG - Chr3:69049485-69049504 None:intergenic 30.0%
!!! AATTGGTTTTTGGTTGGTAA+CGG + Chr3:69051464-69051483 MsG0380015362.01.T01:three_prime_UTR 30.0%
!!! GGTGAGTATTTTAACAAAGT+CGG + Chr3:69050732-69050751 MsG0380015362.01.T01:intron 30.0%
AAAAAAACTACCCATTGACG+TGG - Chr3:69048469-69048488 None:intergenic 35.0%
AAAACACCGAAGTAGTGAAA+AGG - Chr3:69050183-69050202 None:intergenic 35.0%
AAATTTAACAGATCTGTCGC+CGG - Chr3:69050247-69050266 None:intergenic 35.0%
ATGGTAGTAAGTCCAAATTC+CGG - Chr3:69049894-69049913 None:intergenic 35.0%
CACATCTACATGTAACAGTT+TGG - Chr3:69050458-69050477 None:intergenic 35.0%
CTTCATAAGCATGTGGTTAA+GGG - Chr3:69048137-69048156 None:intergenic 35.0%
GAAGTTTATACCACGTCAAT+GGG + Chr3:69048456-69048475 MsG0380015362.01.T01:intron 35.0%
GACAGATCTGTTAAATTTCC+CGG + Chr3:69050249-69050268 MsG0380015362.01.T01:intron 35.0%
GGAAAAAAAATTCAGTTGGG+AGG - Chr3:69048091-69048110 None:intergenic 35.0%
GGGAAAATTTGTGTCAACAA+AGG + Chr3:69051384-69051403 MsG0380015362.01.T01:three_prime_UTR 35.0%
GTAGTAAAGTTTGAAAACGG+AGG + Chr3:69049378-69049397 MsG0380015362.01.T01:intron 35.0%
TAATCACTCTTAAACGGTCT+TGG - Chr3:69048025-69048044 None:intergenic 35.0%
TAGTTCGGATAATGTTAGTG+TGG + Chr3:69051083-69051102 MsG0380015362.01.T01:CDS 35.0%
TCGAAATCCTTCTTAAGATC+TGG - Chr3:69049967-69049986 None:intergenic 35.0%
TGAAGTTTATACCACGTCAA+TGG + Chr3:69048455-69048474 MsG0380015362.01.T01:intron 35.0%
TGTTGTAAGGATGTGTTTGA+AGG + Chr3:69050945-69050964 MsG0380015362.01.T01:CDS 35.0%
TTAAATTTCCCGGTGAATTG+CGG + Chr3:69050259-69050278 MsG0380015362.01.T01:intron 35.0%
TTGTGGTAGAAGAAGAGATA+TGG + Chr3:69050116-69050135 MsG0380015362.01.T01:CDS 35.0%
TTTCACTCGGTAACCAATAA+TGG - Chr3:69048190-69048209 None:intergenic 35.0%
! ACTGAAGTAACACCGAATTT+TGG - Chr3:69050096-69050115 None:intergenic 35.0%
! ATGTAATGGGATGGGAATTT+AGG + Chr3:69051279-69051298 MsG0380015362.01.T01:three_prime_UTR 35.0%
! CAAGAACCTTTTCACTACTT+CGG + Chr3:69050174-69050193 MsG0380015362.01.T01:CDS 35.0%
! TTTGTTGACTAAGTTGGCTT+TGG + Chr3:69051053-69051072 MsG0380015362.01.T01:CDS 35.0%
!! GTTGAAGAGTGTCCAAAATT+CGG + Chr3:69050081-69050100 MsG0380015362.01.T01:CDS 35.0%
!! TGGTTTTTAGATAGTACACG+TGG - Chr3:69049515-69049534 None:intergenic 35.0%
!!! GGTGTTGGCTTTTAGAAAAA+AGG - Chr3:69049494-69049513 None:intergenic 35.0%
!!! TTTTTTCCATACGCATGAGT+TGG + Chr3:69048103-69048122 MsG0380015362.01.T01:intron 35.0%
AAGCACAAGAGAATTTGGAG+TGG + Chr3:69050367-69050386 MsG0380015362.01.T01:CDS 40.0%
AATTAACACCGCAATTCACC+GGG - Chr3:69050270-69050289 None:intergenic 40.0%
ACAAAGAAACGTGTGTCAAC+CGG - Chr3:69051420-69051439 None:intergenic 40.0%
AGGATGTGGAGAAAATGGAA+TGG + Chr3:69051223-69051242 MsG0380015362.01.T01:three_prime_UTR 40.0%
AGGGTATGAGAAATTCACCT+GGG - Chr3:69049633-69049652 None:intergenic 40.0%
ATGTCGGCGATGTATTTGAA+TGG - Chr3:69049913-69049932 None:intergenic 40.0%
ATTATGGCTGGAATGTGTTG+TGG + Chr3:69049820-69049839 MsG0380015362.01.T01:CDS 40.0%
ATTCAAATACATCGCCGACA+TGG + Chr3:69049912-69049931 MsG0380015362.01.T01:CDS 40.0%
CAACGAAGCACAAGAGAATT+TGG + Chr3:69050362-69050381 MsG0380015362.01.T01:CDS 40.0%
CAATTAACACCGCAATTCAC+CGG - Chr3:69050271-69050290 None:intergenic 40.0%
CCTTAACCACATGCTTATGA+AGG + Chr3:69048135-69048154 MsG0380015362.01.T01:intron 40.0%
CCTTCATAAGCATGTGGTTA+AGG - Chr3:69048138-69048157 None:intergenic 40.0%
GAAAACTTGTAGGGAACTCA+AGG + Chr3:69048055-69048074 MsG0380015362.01.T01:intron 40.0%
GGTTCTTGTGAAGAGAAAGA+AGG - Chr3:69050162-69050181 None:intergenic 40.0%
GTTGTTGGTATGTGAATCAG+CGG - Chr3:69048988-69049007 None:intergenic 40.0%
TAGGGTATGAGAAATTCACC+TGG - Chr3:69049634-69049653 None:intergenic 40.0%
TCAGGCTCAGATATCACATA+AGG - Chr3:69050832-69050851 None:intergenic 40.0%
TCTTAAACGGTCTTGGATGT+TGG - Chr3:69048018-69048037 None:intergenic 40.0%
TGGACGATGAAGTTCAAAGA+TGG + Chr3:69050421-69050440 MsG0380015362.01.T01:CDS 40.0%
TTAATTAAGGGCGGTGAGAA+AGG + Chr3:69051175-69051194 MsG0380015362.01.T01:three_prime_UTR 40.0%
TTAGATAGTACACGTGGTGT+TGG - Chr3:69049509-69049528 None:intergenic 40.0%
TTATGTGATATCTGAGCCTG+AGG + Chr3:69050831-69050850 MsG0380015362.01.T01:CDS 40.0%
TTCGGATAATGTTAGTGTGG+TGG + Chr3:69051086-69051105 MsG0380015362.01.T01:CDS 40.0%
! CTAGGTTTAGAATTGGCGAA+TGG + Chr3:69048957-69048976 MsG0380015362.01.T01:intron 40.0%
!! TTCGGTGTTACTTCAGTTTG+TGG + Chr3:69050099-69050118 MsG0380015362.01.T01:CDS 40.0%
AACATCTTCTTTGCCCCTGA+CGG + Chr3:69049573-69049592 MsG0380015362.01.T01:intron 45.0%
AACTTGTAGGGAACTCAAGG+TGG + Chr3:69048058-69048077 MsG0380015362.01.T01:intron 45.0%
AAGAAGCTTTACTACCACCG+TGG + Chr3:69049443-69049462 MsG0380015362.01.T01:intron 45.0%
AAGCAATGGACCCATGAGAA+TGG - Chr3:69049675-69049694 None:intergenic 45.0%
AAGTTTGAAAACGGAGGGTG+AGG + Chr3:69049384-69049403 MsG0380015362.01.T01:intron 45.0%
AGCAATGGACCCATGAGAAT+GGG - Chr3:69049674-69049693 None:intergenic 45.0%
ATAGTGCTCCTGAAGACAAG+AGG - Chr3:69047717-69047736 None:intergenic 45.0%
CCTTCTTAAGATCTGGTTGC+CGG - Chr3:69049960-69049979 None:intergenic 45.0%
CGATTTCCAACTCATGCGTA+TGG - Chr3:69048112-69048131 None:intergenic 45.0%
CTTCTGAACCTCTTGTCTTC+AGG + Chr3:69047706-69047725 MsG0380015362.01.T01:intron 45.0%
GAGCGTCCATATGACAAACT+AGG + Chr3:69048939-69048958 MsG0380015362.01.T01:intron 45.0%
GATATCTGAGCCTGAGGTAA+CGG + Chr3:69050837-69050856 MsG0380015362.01.T01:CDS 45.0%
GATGAAAGAGGAGGAAGCAA+TGG - Chr3:69049689-69049708 None:intergenic 45.0%
GATTTCATCAACGGTCCAGA+TGG + Chr3:69049541-69049560 MsG0380015362.01.T01:intron 45.0%
GGGTATGAGAAATTCACCTG+GGG - Chr3:69049632-69049651 None:intergenic 45.0%
GGTATGAGAAATTCACCTGG+GGG - Chr3:69049631-69049650 None:intergenic 45.0%
TAGACATGGCAAGTACTCCA+AGG - Chr3:69050704-69050723 None:intergenic 45.0%
TATGCCTGTTGCGTTGTTCA+GGG - Chr3:69049011-69049030 None:intergenic 45.0%
TCTTTCCTCCGATCATAAGC+CGG + Chr3:69050608-69050627 MsG0380015362.01.T01:CDS 45.0%
TGAGAGAGAGAGGATGAAAG+AGG - Chr3:69049701-69049720 None:intergenic 45.0%
TGAGCTCCTTCATAAGCATG+TGG - Chr3:69048144-69048163 None:intergenic 45.0%
TGGAACAACACCATGCAACA+AGG + Chr3:69050387-69050406 MsG0380015362.01.T01:CDS 45.0%
TGTTTGATCCTAGCGAGTGA+TGG + Chr3:69050886-69050905 MsG0380015362.01.T01:CDS 45.0%
TTATGCCTGTTGCGTTGTTC+AGG - Chr3:69049012-69049031 None:intergenic 45.0%
TTTATGGACGTCAAGCTCCA+AGG + Chr3:69048487-69048506 MsG0380015362.01.T01:intron 45.0%
! ATCTAGTTTCGTGCCTGTAC+AGG - Chr3:69048893-69048912 None:intergenic 45.0%
! GATGTTGCATTGATGCCATC+TGG - Chr3:69049559-69049578 None:intergenic 45.0%
! GGCTTTGGCAAGACATAGTT+CGG + Chr3:69051068-69051087 MsG0380015362.01.T01:CDS 45.0%
! GTGGGAGAGAAGCTTTTGTA+GGG - Chr3:69049652-69049671 None:intergenic 45.0%
! TCTAGTTTCGTGCCTGTACA+GGG - Chr3:69048892-69048911 None:intergenic 45.0%
!! ACACTGCTTGTGGTGTTGTA+AGG + Chr3:69050932-69050951 MsG0380015362.01.T01:CDS 45.0%
!! CTTCAGGAGCACTATTCTTC+AGG + Chr3:69047722-69047741 MsG0380015362.01.T01:intron 45.0%
!! GGAATGTGTTGTGGTGTTGT+CGG + Chr3:69049829-69049848 MsG0380015362.01.T01:CDS 45.0%
!! GTGTGGTGGTGATTGATTTG+AGG + Chr3:69051100-69051119 MsG0380015362.01.T01:CDS 45.0%
!! TTCAGGAGCGCTATTTCTTC+AGG + Chr3:69047755-69047774 MsG0380015362.01.T01:intron 45.0%
!! TTCGACTCGGAGCAATTCAT+CGG - Chr3:69050640-69050659 None:intergenic 45.0%
!!! CACTACTTCGGTGTTTTCGA+CGG + Chr3:69050186-69050205 MsG0380015362.01.T01:CDS 45.0%
!!! TTCAGGAGCGCTTTTTCTTC+AGG + Chr3:69047789-69047808 MsG0380015362.01.T01:intron 45.0%
!! ATTAATTAATCAATTAATTA+AGG + Chr3:69051162-69051181 MsG0380015362.01.T01:three_prime_UTR 5.0%
!! TAAAAATGTTTATAAAAAAA+TGG + Chr3:69049291-69049310 MsG0380015362.01.T01:intron 5.0%
!! TTAATTAATCAATTAATTAA+GGG + Chr3:69051163-69051182 MsG0380015362.01.T01:three_prime_UTR 5.0%
!! TTAATTAATTTAATTATTCT+TGG - Chr3:69051151-69051170 None:intergenic 5.0%
AACTTAGCGAACCCCTGTAC+AGG + Chr3:69048877-69048896 MsG0380015362.01.T01:intron 50.0%
AATGGACCCATGAGAATGGG+TGG - Chr3:69049671-69049690 None:intergenic 50.0%
ACTCCTCACTGTGATGCTGT+TGG + Chr3:69050486-69050505 MsG0380015362.01.T01:CDS 50.0%
AGCAATTCATCGGGTCGATC+CGG - Chr3:69050630-69050649 None:intergenic 50.0%
ATGCCTGTTGCGTTGTTCAG+GGG - Chr3:69049010-69049029 None:intergenic 50.0%
ATGGACCCATGAGAATGGGT+GGG - Chr3:69049670-69049689 None:intergenic 50.0%
CCGGCAACCAGATCTTAAGA+AGG + Chr3:69049957-69049976 MsG0380015362.01.T01:CDS 50.0%
CTAGTTTCGTGCCTGTACAG+GGG - Chr3:69048891-69048910 None:intergenic 50.0%
CTTCAGGAGCAGCTTACTTC+AGG + Chr3:69047738-69047757 MsG0380015362.01.T01:intron 50.0%
GACAACAGCAACAACAGCTG+TGG - Chr3:69050514-69050533 None:intergenic 50.0%
GAGAGAGAGGATGAAAGAGG+AGG - Chr3:69049698-69049717 None:intergenic 50.0%
GATCCAACAGCATCACAGTG+AGG - Chr3:69050492-69050511 None:intergenic 50.0%
GCAAGTACTCCAAGGACTCT+AGG - Chr3:69050696-69050715 None:intergenic 50.0%
GCACCAATCATGTTGGACCA+CGG - Chr3:69049463-69049482 None:intergenic 50.0%
GGCTTATGATCGGAGGAAAG+AGG - Chr3:69050609-69050628 None:intergenic 50.0%
GTACGTGGCACCAATCATGT+TGG - Chr3:69049470-69049489 None:intergenic 50.0%
GTGTCAAACGACACTGCTTG+TGG + Chr3:69050922-69050941 MsG0380015362.01.T01:CDS 50.0%
TCTCTCCCACCCATTCTCAT+GGG + Chr3:69049662-69049681 MsG0380015362.01.T01:intron 50.0%
TGAATTGCTCCGAGTCGAAG+CGG + Chr3:69050641-69050660 MsG0380015362.01.T01:CDS 50.0%
TGGGGGCCACAATGTAATCA+CGG - Chr3:69049614-69049633 None:intergenic 50.0%
TTCAGGAGCAAGTTGCCTTC+AGG + Chr3:69047806-69047825 MsG0380015362.01.T01:intron 50.0%
TTCAGGAGCAGCTTGACTTC+AGG + Chr3:69047772-69047791 MsG0380015362.01.T01:intron 50.0%
TTCTCTCCCACCCATTCTCA+TGG + Chr3:69049661-69049680 MsG0380015362.01.T01:intron 50.0%
TTGCGTTGTTCAGGGGTTGT+TGG - Chr3:69049003-69049022 None:intergenic 50.0%
! CTGGACCGTTGATGAAATCG+CGG - Chr3:69049540-69049559 None:intergenic 50.0%
! CTTGCCATGTCTAGAGCCAT+AGG + Chr3:69050711-69050730 MsG0380015362.01.T01:CDS 50.0%
! GGTGGGAGAGAAGCTTTTGT+AGG - Chr3:69049653-69049672 None:intergenic 50.0%
! TGAGCCTGAGGTAACGGTAA+CGG + Chr3:69050843-69050862 MsG0380015362.01.T01:CDS 50.0%
! TGGACCGTTGATGAAATCGC+GGG - Chr3:69049539-69049558 None:intergenic 50.0%
!! CCTAGCGAGTGATGGACTAT+GGG + Chr3:69050894-69050913 MsG0380015362.01.T01:CDS 50.0%
!! CTCACCTATGGCTCTAGACA+TGG - Chr3:69050718-69050737 None:intergenic 50.0%
!! GACGACGGATGGTTCTGATA+GGG + Chr3:69051011-69051030 MsG0380015362.01.T01:CDS 50.0%
!! TCCTAGCGAGTGATGGACTA+TGG + Chr3:69050893-69050912 MsG0380015362.01.T01:CDS 50.0%
!! TCGACTCGGAGCAATTCATC+GGG - Chr3:69050639-69050658 None:intergenic 50.0%
!! TGACGACGGATGGTTCTGAT+AGG + Chr3:69051010-69051029 MsG0380015362.01.T01:CDS 50.0%
!! TGTTGTGGTGTTGTCGGAGA+AGG + Chr3:69049835-69049854 MsG0380015362.01.T01:CDS 50.0%
!!! TTCGGTGTTTTCGACGGTCA+CGG + Chr3:69050192-69050211 MsG0380015362.01.T01:CDS 50.0%
AACGCCGCTACGGCAAAGAA+CGG - Chr3:69050580-69050599 None:intergenic 55.0%
ACATGGCGTCCGGAACTTCA+CGG + Chr3:69049929-69049948 MsG0380015362.01.T01:CDS 55.0%
ACCGGAAAACGAGGTGACGA+CGG + Chr3:69050996-69051015 MsG0380015362.01.T01:CDS 55.0%
AGAGCCGTTCTTTGCCGTAG+CGG + Chr3:69050573-69050592 MsG0380015362.01.T01:CDS 55.0%
CAACCCCTGAACAACGCAAC+AGG + Chr3:69049004-69049023 MsG0380015362.01.T01:intron 55.0%
CCAATCATGTTGGACCACGG+TGG - Chr3:69049460-69049479 None:intergenic 55.0%
CCACCGTGGTCCAACATGAT+TGG + Chr3:69049457-69049476 MsG0380015362.01.T01:intron 55.0%
CCAGCCCGCGATTTCATCAA+CGG + Chr3:69049532-69049551 MsG0380015362.01.T01:intron 55.0%
CCCATAGTCCATCACTCGCT+AGG - Chr3:69050897-69050916 None:intergenic 55.0%
CGTTCCGTTACCGTTACCTC+AGG - Chr3:69050850-69050869 None:intergenic 55.0%
GAAAACGAGGTGACGACGGA+TGG + Chr3:69051000-69051019 MsG0380015362.01.T01:CDS 55.0%
GAAGGAACGGTGAGAGAGAG+AGG - Chr3:69049711-69049730 None:intergenic 55.0%
GAGGAATAGCAACGCCGCTA+CGG - Chr3:69050590-69050609 None:intergenic 55.0%
GCAACAAGGCTTTGCTCGCA+TGG + Chr3:69050401-69050420 MsG0380015362.01.T01:CDS 55.0%
GCCACAATGTAATCACGGGC+AGG - Chr3:69049609-69049628 None:intergenic 55.0%
GCCTGCCCGTGATTACATTG+TGG + Chr3:69049605-69049624 MsG0380015362.01.T01:intron 55.0%
GCTGCATCATCAGAAGCTGC+AGG - Chr3:69047633-69047652 None:intergenic 55.0%
GGGGGCCACAATGTAATCAC+GGG - Chr3:69049613-69049632 None:intergenic 55.0%
GGGTCGATCCGGCTTATGAT+CGG - Chr3:69050619-69050638 None:intergenic 55.0%
GTAAGTCCAAATTCCGGCGC+CGG - Chr3:69049888-69049907 None:intergenic 55.0%
GTGATTACATTGTGGCCCCC+AGG + Chr3:69049613-69049632 MsG0380015362.01.T01:intron 55.0%
TAAGTCCAAATTCCGGCGCC+GGG - Chr3:69049887-69049906 None:intergenic 55.0%
TCGATCCGGCTTATGATCGG+AGG - Chr3:69050616-69050635 None:intergenic 55.0%
TGAAGCTTGGACGCTCCTGA+AGG - Chr3:69047824-69047843 None:intergenic 55.0%
TGAAGTTCCGGACGCCATGT+CGG - Chr3:69049929-69049948 None:intergenic 55.0%
TGGGATGGTCCTAGAGTCCT+TGG + Chr3:69050684-69050703 MsG0380015362.01.T01:CDS 55.0%
TGTCGGAGAAGGTGACTCAC+CGG + Chr3:69049846-69049865 MsG0380015362.01.T01:CDS 55.0%
TTCTTTGCCCCTGACGGTGA+CGG + Chr3:69049579-69049598 MsG0380015362.01.T01:intron 55.0%
! TCCGTCGTCACCTCGTTTTC+CGG - Chr3:69051000-69051019 None:intergenic 55.0%
! TGGAGGGCGCGTGATCTATT+GGG + Chr3:69050665-69050684 MsG0380015362.01.T01:CDS 55.0%
!! GCGAGCAAAGCCTTGTTGCA+TGG - Chr3:69050400-69050419 None:intergenic 55.0%
AACGGAGGGTGAGGTGAGAG+TGG + Chr3:69049393-69049412 MsG0380015362.01.T01:intron 60.0%
ACGGAGGGTGAGGTGAGAGT+GGG + Chr3:69049394-69049413 MsG0380015362.01.T01:intron 60.0%
CCGGAACTTCACGGAAACGC+CGG + Chr3:69049938-69049957 MsG0380015362.01.T01:CDS 60.0%
CCGGCGTTTCCGTGAAGTTC+CGG - Chr3:69049941-69049960 None:intergenic 60.0%
GGGCGCGTGATCTATTGGGA+TGG + Chr3:69050669-69050688 MsG0380015362.01.T01:CDS 60.0%
TACATCGCCGACATGGCGTC+CGG + Chr3:69049919-69049938 MsG0380015362.01.T01:CDS 60.0%
TCTTTGCCCCTGACGGTGAC+GGG + Chr3:69049580-69049599 MsG0380015362.01.T01:intron 60.0%
! ACCTCGTTTTCCGGTGTCCC+CGG - Chr3:69050991-69051010 None:intergenic 60.0%
! CCGTTGATGAAATCGCGGGC+TGG - Chr3:69049535-69049554 None:intergenic 60.0%
! CTGGAGGGCGCGTGATCTAT+TGG + Chr3:69050664-69050683 MsG0380015362.01.T01:CDS 60.0%
GAGGGTGAGGTGAGAGTGGG+AGG + Chr3:69049397-69049416 MsG0380015362.01.T01:intron 65.0%
GGTGAGGTGAGAGTGGGAGG+AGG + Chr3:69049400-69049419 MsG0380015362.01.T01:intron 65.0%
TCCGAGTCGAAGCGGCTGGA+GGG + Chr3:69050649-69050668 MsG0380015362.01.T01:CDS 65.0%
TTGCTCCGAGTCGAAGCGGC+TGG + Chr3:69050645-69050664 MsG0380015362.01.T01:CDS 65.0%
! TCCAAATTCCGGCGCCGGGA+GGG - Chr3:69049883-69049902 None:intergenic 65.0%
AGAAGCTGCCGTCGCTGCCG+GGG + Chr3:69050971-69050990 MsG0380015362.01.T01:CDS 70.0%
AGGCTGCCCGTCACCGTCAG+GGG - Chr3:69049589-69049608 None:intergenic 70.0%
CAGAAGCTGCCGTCGCTGCC+GGG + Chr3:69050970-69050989 MsG0380015362.01.T01:CDS 70.0%
CAGGCTGCCCGTCACCGTCA+GGG - Chr3:69049590-69049609 None:intergenic 70.0%
CGGCGAGTTCACGTCCCTCC+CGG + Chr3:69049866-69049885 MsG0380015362.01.T01:CDS 70.0%
CGGGAGGGACGTGAACTCGC+CGG - Chr3:69049868-69049887 None:intergenic 70.0%
CTCCGAGTCGAAGCGGCTGG+AGG + Chr3:69050648-69050667 MsG0380015362.01.T01:CDS 70.0%
GCAGAAGCTGCCGTCGCTGC+CGG + Chr3:69050969-69050988 MsG0380015362.01.T01:CDS 70.0%
GCCCTCCAGCCGCTTCGACT+CGG - Chr3:69050653-69050672 None:intergenic 70.0%
GCCGGGGACACCGGAAAACG+AGG + Chr3:69050987-69051006 MsG0380015362.01.T01:CDS 70.0%
! GTCCAAATTCCGGCGCCGGG+AGG - Chr3:69049884-69049903 None:intergenic 70.0%
! TCCCTCCCGGCGCCGGAATT+TGG + Chr3:69049879-69049898 MsG0380015362.01.T01:CDS 70.0%
GCAGGCTGCCCGTCACCGTC+AGG - Chr3:69049591-69049610 None:intergenic 75.0%
GTTCACGTCCCTCCCGGCGC+CGG + Chr3:69049872-69049891 MsG0380015362.01.T01:CDS 75.0%
TCCGGTGTCCCCGGCAGCGA+CGG - Chr3:69050982-69051001 None:intergenic 75.0%
! GCCGTCGCTGCCGGGGACAC+CGG + Chr3:69050978-69050997 MsG0380015362.01.T01:CDS 80.0%
Chromosome Type Strat End Strand Name
Chr3 gene 69047618 69051534 69047618 ID=MsG0380015362.01;Name=MsG0380015362.01
Chr3 mRNA 69047618 69051534 69047618 ID=MsG0380015362.01.T01;Parent=MsG0380015362.01;Name=MsG0380015362.01.T01;_AED=0.12;_eAED=0.12;_QI=0|0.66|0.5|0.75|1|1|4|373|421
Chr3 exon 69047618 69047701 69047618 ID=MsG0380015362.01.T01:exon:23396;Parent=MsG0380015362.01.T01
Chr3 exon 69049814 69050224 69049814 ID=MsG0380015362.01.T01:exon:23397;Parent=MsG0380015362.01.T01
Chr3 exon 69050312 69050732 69050312 ID=MsG0380015362.01.T01:exon:23398;Parent=MsG0380015362.01.T01
Chr3 exon 69050812 69051534 69050812 ID=MsG0380015362.01.T01:exon:23399;Parent=MsG0380015362.01.T01
Chr3 CDS 69047618 69047701 69047618 ID=MsG0380015362.01.T01:cds;Parent=MsG0380015362.01.T01
Chr3 CDS 69049814 69050224 69049814 ID=MsG0380015362.01.T01:cds;Parent=MsG0380015362.01.T01
Chr3 CDS 69050312 69050732 69050312 ID=MsG0380015362.01.T01:cds;Parent=MsG0380015362.01.T01
Chr3 CDS 69050812 69051161 69050812 ID=MsG0380015362.01.T01:cds;Parent=MsG0380015362.01.T01
Chr3 three_prime_UTR 69051162 69051534 69051162 ID=MsG0380015362.01.T01:three_prime_utr;Parent=MsG0380015362.01.T01
Gene Sequence

>MsG0380015362.01.T01

ATGGCTTCTGATGAGGCAGCTTCTGATGATGCAGCTTCTGATGAGATGACTCCTGCAGCTTCTGATGATGCAGCTTCTGATGATTTTTTCATTATGGCTGGAATGTGTTGTGGTGTTGTCGGAGAAGGTGACTCACCGGCGAGTTCACGTCCCTCCCGGCGCCGGAATTTGGACTTACTACCATTCAAATACATCGCCGACATGGCGTCCGGAACTTCACGGAAACGCCGGCAACCAGATCTTAAGAAGGATTTCGAAAGCTGTGAAGACTCTAGCGACGACAAAAGTGACAAAAGTAAGAAAAACAAGAAGGAAGATAAAGAAAAATCTTCAACAGAAGGTAATTTCGAAGTTGAAGAGTGTCCAAAATTCGGTGTTACTTCAGTTTGTGGTAGAAGAAGAGATATGGAAGATTCAGTTTCGGTTAAACCTTCTTTCTCTTCACAAGAACCTTTTCACTACTTCGGTGTTTTCGACGGTCACGGTTGCTCTCATGTTGCTACTATGTGTAAAGAAAGACTTCATGAAATTGTGAAGGAAGAAATCAACGAAGCACAAGAGAATTTGGAGTGGAACAACACCATGCAACAAGGCTTTGCTCGCATGGACGATGAAGTTCAAAGATGGAACAGCAGTAGCCAAACTGTTACATGTAGATGTGAGCTTCAAACTCCTCACTGTGATGCTGTTGGATCCACAGCTGTTGTTGCTGTTGTCACTCCAGACAAAATTATCGTCTCAAACTGTGGTGATTCAAGAGCCGTTCTTTGCCGTAGCGGCGTTGCTATTCCTCTTTCCTCCGATCATAAGCCGGATCGACCCGATGAATTGCTCCGAGTCGAAGCGGCTGGAGGGCGCGTGATCTATTGGGATGGTCCTAGAGTCCTTGGAGTACTTGCCATGTCTAGAGCCATAGGTGACAATTATTTGAAACCTTATGTGATATCTGAGCCTGAGGTAACGGTAACGGAACGTAAAGAAGAAGATGAGTGTTTGATCCTAGCGAGTGATGGACTATGGGATGTTGTGTCAAACGACACTGCTTGTGGTGTTGTAAGGATGTGTTTGAAGGCGCAGAAGCTGCCGTCGCTGCCGGGGACACCGGAAAACGAGGTGACGACGGATGGTTCTGATAGGGCATGTTCCGATGCTTCAATTTTGTTGACTAAGTTGGCTTTGGCAAGACATAGTTCGGATAATGTTAGTGTGGTGGTGATTGATTTGAGGAGAGATCGACGACAAGCATCAAATTCCAAGAATAATTAA

Protein sequence

>MsG0380015362.01.T01

MASDEAASDDAASDEMTPAASDDAASDDFFIMAGMCCGVVGEGDSPASSRPSRRRNLDLLPFKYIADMASGTSRKRRQPDLKKDFESCEDSSDDKSDKSKKNKKEDKEKSSTEGNFEVEECPKFGVTSVCGRRRDMEDSVSVKPSFSSQEPFHYFGVFDGHGCSHVATMCKERLHEIVKEEINEAQENLEWNNTMQQGFARMDDEVQRWNSSSQTVTCRCELQTPHCDAVGSTAVVAVVTPDKIIVSNCGDSRAVLCRSGVAIPLSSDHKPDRPDELLRVEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERKEEDECLILASDGLWDVVSNDTACGVVRMCLKAQKLPSLPGTPENEVTTDGSDRACSDASILLTKLALARHSSDNVSVVVIDLRRDRRQASNSKNN*