AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041668.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041668.01.T04 MTR_7g115570 95.000 40 2 0 3 42 36 75 9.63e-24 92.4
MsG0780041668.01.T04 MTR_7g115570 95.000 40 2 0 3 42 204 243 1.71e-23 92.4
MsG0780041668.01.T04 MTR_7g115570 95.000 40 2 0 3 42 204 243 3.80e-23 90.9
MsG0780041668.01.T04 MTR_1g080320 84.211 38 6 0 3 40 225 262 1.40e-18 78.6
MsG0780041668.01.T03 MTR_7g115570 95.000 40 2 0 3 42 36 75 9.63e-24 92.4
MsG0780041668.01.T03 MTR_7g115570 95.000 40 2 0 3 42 204 243 1.71e-23 92.4
MsG0780041668.01.T03 MTR_7g115570 95.000 40 2 0 3 42 204 243 3.80e-23 90.9
MsG0780041668.01.T03 MTR_1g080320 84.211 38 6 0 3 40 225 262 1.40e-18 78.6
MsG0780041668.01.T02 MTR_7g115570 95.000 40 2 0 3 42 36 75 9.63e-24 92.4
MsG0780041668.01.T02 MTR_7g115570 95.000 40 2 0 3 42 204 243 1.71e-23 92.4
MsG0780041668.01.T02 MTR_7g115570 95.000 40 2 0 3 42 204 243 3.80e-23 90.9
MsG0780041668.01.T02 MTR_1g080320 84.211 38 6 0 3 40 225 262 1.40e-18 78.6
MsG0780041668.01.T01 MTR_7g115570 95.000 40 2 0 3 42 36 75 9.63e-24 92.4
MsG0780041668.01.T01 MTR_7g115570 95.000 40 2 0 3 42 204 243 1.71e-23 92.4
MsG0780041668.01.T01 MTR_7g115570 95.000 40 2 0 3 42 204 243 3.80e-23 90.9
MsG0780041668.01.T01 MTR_1g080320 84.211 38 6 0 3 40 225 262 1.40e-18 78.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041668.01.T04 AT5G28910 70.000 40 12 0 3 42 53 92 2.18e-15 69.3
MsG0780041668.01.T04 AT5G28910 70.000 40 12 0 3 42 180 219 2.33e-15 69.3
MsG0780041668.01.T03 AT5G28910 70.000 40 12 0 3 42 53 92 2.18e-15 69.3
MsG0780041668.01.T03 AT5G28910 70.000 40 12 0 3 42 180 219 2.33e-15 69.3
MsG0780041668.01.T02 AT5G28910 70.000 40 12 0 3 42 53 92 2.18e-15 69.3
MsG0780041668.01.T02 AT5G28910 70.000 40 12 0 3 42 180 219 2.33e-15 69.3
MsG0780041668.01.T01 AT5G28910 70.000 40 12 0 3 42 53 92 2.18e-15 69.3
MsG0780041668.01.T01 AT5G28910 70.000 40 12 0 3 42 180 219 2.33e-15 69.3

Find 84 sgRNAs with CRISPR-Local

Find 312 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGTATTGTTTCTTTGATTT+TGG 0.061596 7:+93696774 MsG0780041668.01.T01:five_prime_UTR
AACAGTAGGATTCATATTAT+TGG 0.171579 7:-93697093 None:intergenic
AGCCTAGTATTAAGAGAAAA+TGG 0.173428 7:+93696950 MsG0780041668.01.T01:intron
AAGCATACTATAATTAATTT+TGG 0.173474 7:+93697661 MsG0780041668.01.T01:intron
ATGAAATACAGTTGAACTTT+AGG 0.198314 7:+93697544 MsG0780041668.01.T01:intron
CAAAAGAAGAAAATCATAAA+TGG 0.218706 7:-93697033 None:intergenic
GTAGTAGACCTTTGATTTAA+TGG 0.224978 7:-93696661 None:intergenic
GTACCTTTGAGTTAGATTTA+AGG 0.229798 7:-93695787 None:intergenic
GTTAATCTTTCTATTTCTTT+AGG 0.231940 7:-93697943 None:intergenic
CTACAAGATAACATTACATT+AGG 0.278773 7:+93697707 MsG0780041668.01.T01:intron
TTCTTCATATAGCAGTTAAA+AGG 0.281988 7:-93697403 None:intergenic
TGAAATACAGTTGAACTTTA+GGG 0.291329 7:+93697545 MsG0780041668.01.T01:intron
CTGAGAGAAGTAAGTGCTTA+TGG 0.301437 7:+93698054 MsG0780041668.01.T01:five_prime_UTR
ACAAAAGAAGAAAATAATAA+AGG 0.310828 7:-93697471 None:intergenic
CATATTATTGGATTAATGTT+AGG 0.320015 7:-93697081 None:intergenic
GTATCCGAGTCTTTCTATTC+AGG 0.324843 7:+93695979 MsG0780041668.01.T01:five_prime_UTR
CAAAAGAAGAAAATAATAAA+GGG 0.333338 7:-93697470 None:intergenic
AATTTCCAATGTGGAGCATT+AGG 0.336361 7:-93698104 None:intergenic
TGTCTTACACAAAGTGCTTA+TGG 0.342584 7:+93696208 MsG0780041668.01.T01:five_prime_UTR
GTAGTAAATGAAAGTGATTA+AGG 0.374019 7:-93696896 None:intergenic
ATATATATTGACATGAATAT+AGG 0.401990 7:-93696562 None:intergenic
TTGGCTATTCTTGGTAACTT+TGG 0.403485 7:+93696793 MsG0780041668.01.T01:five_prime_UTR
TATCTTTGCTTTACTCAGCT+TGG 0.415647 7:+93698006 MsG0780041668.01.T01:five_prime_UTR
CTATTCAGGCCACTCATGTA+AGG 0.416717 7:+93695993 MsG0780041668.01.T01:five_prime_UTR
TACAAGATAACATTACATTA+GGG 0.421242 7:+93697708 MsG0780041668.01.T01:intron
GCATAGAAAAGTGAGCAAAC+TGG 0.436313 7:-93696822 None:intergenic
TGAGAGAGTGGTTTCTCAAA+GGG 0.446705 7:+93696690 MsG0780041668.01.T01:five_prime_UTR
TAAAGAAAAGGAGAGTGAAA+TGG 0.447951 7:+93696636 MsG0780041668.01.T01:intron
AGAGATTAATCAAGATGAAA+GGG 0.457936 7:+93697983 MsG0780041668.01.T01:five_prime_UTR
CATGTTCATGCATAAAGAAA+AGG 0.467559 7:+93696624 MsG0780041668.01.T01:intron
AAAAGAAGAAAATCATAAAT+GGG 0.473523 7:-93697032 None:intergenic
ACTATCTTAGAAGTTGTGTT+GGG 0.479909 7:-93695958 None:intergenic
ATGGCCCACAAGTTTCTTTG+AGG 0.489548 7:+93696530 MsG0780041668.01.T01:five_prime_UTR
GCCTAGTATTAAGAGAAAAT+GGG 0.491366 7:+93696951 MsG0780041668.01.T01:intron
GCCACCTCAAAGAAACTTGT+GGG 0.493147 7:-93696534 None:intergenic
TACTATCTTAGAAGTTGTGT+TGG 0.496591 7:-93695959 None:intergenic
CCACCAATGGAGAATAGAAA+AGG 0.502124 7:-93695724 None:intergenic
AAGAGATTAATCAAGATGAA+AGG 0.505559 7:+93697982 MsG0780041668.01.T01:five_prime_UTR
AGTAAGTGCTTATGGAAACT+TGG 0.512305 7:+93698062 MsG0780041668.01.T01:five_prime_UTR
AAGTGAGTGGCAACCACCAA+TGG 0.512333 7:-93695737 None:intergenic
GCCCACAAGTTTCTTTGAGG+TGG 0.514528 7:+93696533 MsG0780041668.01.T01:intron
TGCATAACCGTCTCGACACA+CGG 0.520454 7:+93698145 MsG0780041668.01.T01:five_prime_UTR
TACTACTCCTCTTGAGAGAG+TGG 0.522344 7:+93696678 MsG0780041668.01.T01:five_prime_UTR
CCTTTCCACCATGGACAAGT+AGG 0.522455 7:+93698181 MsG0780041668.01.T01:five_prime_UTR
TTCCTATCCGTGTGTCGAGA+CGG 0.522589 7:-93698152 None:intergenic
TTGAGAGAGTGGTTTCTCAA+AGG 0.528985 7:+93696689 MsG0780041668.01.T01:five_prime_UTR
CCTACTTGTCCATGGTGGAA+AGG 0.537449 7:-93698181 None:intergenic
GGAAAATAACTTACTGATGG+TGG 0.537841 7:-93696875 None:intergenic
ATTAATGTTAGGAAGACAGT+AGG 0.553801 7:-93697070 None:intergenic
TGCCACCTCAAAGAAACTTG+TGG 0.556895 7:-93696535 None:intergenic
AAATGGAGCCATTAAATCAA+AGG 0.561729 7:+93696653 MsG0780041668.01.T01:five_prime_UTR
AGAAAAGGATCACCTGCCTA+TGG 0.563805 7:-93695709 None:intergenic
AATCCTTTCCTACTTGTCCA+TGG 0.564954 7:-93698189 None:intergenic
ATGTGGAGCATTAGGCAAGT+TGG 0.565929 7:-93698096 None:intergenic
ACTTAATTAACCGCCACCAT+AGG 0.568471 7:+93695693 None:intergenic
AATTAACCGCCACCATAGGC+AGG 0.574114 7:+93695697 None:intergenic
TCACCTTAAATCTAACTCAA+AGG 0.576224 7:+93695784 MsG0780041668.01.T03:five_prime_UTR
TCTGAGGGTAATCATCCACC+TGG 0.584382 7:+93698237 MsG0780041668.01.T01:five_prime_UTR
TGAGAAACCACTCTCTCAAG+AGG 0.586656 7:-93696685 None:intergenic
TTAATACTAGGCTAGAAACT+AGG 0.588468 7:-93696940 None:intergenic
CAAGTGCGGTCTGAGTCAAA+AGG 0.592882 7:-93697684 None:intergenic
TAAGGAAAATAACTTACTGA+TGG 0.593836 7:-93696878 None:intergenic
AACCGTCTCGACACACGGAT+AGG 0.596878 7:+93698150 MsG0780041668.01.T01:five_prime_UTR
TCATGAAGGCCTTACATGAG+TGG 0.604543 7:-93696002 None:intergenic
ACTTGCCTAATGCTCCACAT+TGG 0.606143 7:+93698099 MsG0780041668.01.T01:five_prime_UTR
CCACCATGGACAAGTAGGAA+AGG 0.607649 7:+93698186 MsG0780041668.01.T01:five_prime_UTR
TACCCTCAGATACAGCAAGA+GGG 0.609496 7:-93698224 None:intergenic
TAAGATCCTTGACCTCATGA+AGG 0.609852 7:-93696016 None:intergenic
GAAATGATTCCTTTCCACCA+TGG 0.616729 7:+93698172 MsG0780041668.01.T01:five_prime_UTR
CCTTTCCTACTTGTCCATGG+TGG 0.617827 7:-93698186 None:intergenic
TCGCGTTGCAATTTCCAATG+TGG 0.624245 7:-93698113 None:intergenic
AAAGGATCACCTGCCTATGG+TGG 0.626177 7:-93695706 None:intergenic
AAAAGAAGAAAATAATAAAG+GGG 0.632395 7:-93697469 None:intergenic
ACCCTCAGATACAGCAAGAG+GGG 0.639224 7:-93698223 None:intergenic
GCAACAGCACATATCTGACA+TGG 0.647774 7:-93696736 None:intergenic
AATACAGTTGAACTTTAGGG+AGG 0.648710 7:+93697548 MsG0780041668.01.T01:intron
ATGTTATCTTGTAGCAAGTG+CGG 0.652204 7:-93697698 None:intergenic
CCCTCAGATACAGCAAGAGG+GGG 0.652389 7:-93698222 None:intergenic
TTACCCTCAGATACAGCAAG+AGG 0.671672 7:-93698225 None:intergenic
GTGGCCTGAATAGAAAGACT+CGG 0.679651 7:-93695983 None:intergenic
GATATTTAATATGAGACACA+TGG 0.683719 7:+93697325 MsG0780041668.01.T01:intron
CTGAGGGTAATCATCCACCT+GGG 0.698123 7:+93698238 MsG0780041668.01.T01:five_prime_UTR
ACTCATGTAAGGCCTTCATG+AGG 0.698395 7:+93696004 MsG0780041668.01.T01:five_prime_UTR
GATTAAGAAACATACCCAGG+TGG 0.721966 7:-93698252 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATATGAATAATTTTTTAC+TGG - Chr7:93701085-93701104 None:intergenic 10.0%
!!! AATAATTTTAAAAAAACAGT+AGG - Chr7:93697514-93697533 None:intergenic 10.0%
!!! AATTTGTTATTTAGTAATTT+TGG + Chr7:93698371-93698390 MsG0780041668.01.T01:intron 10.0%
!!! TACAATAATTTTTTTTTTGA+GGG + Chr7:93697216-93697235 MsG0780041668.01.T01:intron 10.0%
!! AAAAGAAGAAAATAATAAAG+GGG - Chr7:93697472-93697491 None:intergenic 15.0%
!! AAAAGAAGAAAATCATAAAT+GGG - Chr7:93697035-93697054 None:intergenic 15.0%
!! AATAATTATATGAGACAAAA+AGG + Chr7:93696091-93696110 MsG0780041668.01.T01:intron 15.0%
!! ACAAAAGAAGAAAATAATAA+AGG - Chr7:93697474-93697493 None:intergenic 15.0%
!! ATATATATTGACATGAATAT+AGG - Chr7:93696565-93696584 None:intergenic 15.0%
!! CAAAAGAAGAAAATAATAAA+GGG - Chr7:93697473-93697492 None:intergenic 15.0%
!! TTAACTTAACTTTATAAAAC+CGG - Chr7:93696050-93696069 None:intergenic 15.0%
!! TTATTATTAGAATCTAACTT+TGG - Chr7:93696073-93696092 None:intergenic 15.0%
!!! AAGCATACTATAATTAATTT+TGG + Chr7:93697661-93697680 MsG0780041668.01.T01:intron 15.0%
!!! ACTATCAATAAGTAATTTTT+TGG - Chr7:93697133-93697152 None:intergenic 15.0%
!!! ATTAATTTTAGAAAAACAGT+AGG - Chr7:93697110-93697129 None:intergenic 15.0%
!!! GTACAATAATTTTTTTTTTG+AGG + Chr7:93697215-93697234 MsG0780041668.01.T01:intron 15.0%
!!! TCATTTTCTATAATCTAATA+AGG - Chr7:93698632-93698651 None:intergenic 15.0%
!!! TTTGGATTTTGTATTTAATA+AGG + Chr7:93698472-93698491 MsG0780041668.01.T01:intron 15.0%
!! AATATACATAGAATGAGAAA+AGG - Chr7:93696461-93696480 None:intergenic 20.0%
!! AATATCAAAGCATGTAAAAA+TGG - Chr7:93700310-93700329 None:intergenic 20.0%
!! AATTTATCAATATCAGACTT+TGG - Chr7:93700384-93700403 None:intergenic 20.0%
!! ATATATATGTGTATTGGATA+CGG + Chr7:93700045-93700064 MsG0780041668.01.T01:intron 20.0%
!! CAAAAGAAGAAAATCATAAA+TGG - Chr7:93697036-93697055 None:intergenic 20.0%
!! CATATTATTGGATTAATGTT+AGG - Chr7:93697084-93697103 None:intergenic 20.0%
!! CTGATATTGATAAATTTGTA+TGG + Chr7:93700388-93700407 MsG0780041668.01.T01:three_prime_UTR 20.0%
!! GAAATAATGAATACTAAAAG+AGG - Chr7:93695820-93695839 None:intergenic 20.0%
!! TACAAGATAACATTACATTA+GGG + Chr7:93697708-93697727 MsG0780041668.01.T01:intron 20.0%
!! TGGATTAATAAACAGAAATA+AGG - Chr7:93699409-93699428 None:intergenic 20.0%
!!! GAAGAATTCATTTTATTTAG+AGG + Chr7:93696252-93696271 MsG0780041668.01.T01:five_prime_UTR 20.0%
!!! GTTAATCTTTCTATTTCTTT+AGG - Chr7:93697946-93697965 None:intergenic 20.0%
! AAAACATTGGTAGAAAATGA+TGG - Chr7:93699478-93699497 None:intergenic 25.0%
! AACAGTAGGATTCATATTAT+TGG - Chr7:93697096-93697115 None:intergenic 25.0%
! AAGAGATTAATCAAGATGAA+AGG + Chr7:93697982-93698001 MsG0780041668.01.T01:five_prime_UTR 25.0%
! AAGTGGAATTCATTATACAA+AGG + Chr7:93700697-93700716 MsG0780041668.01.T01:three_prime_UTR 25.0%
! AATTTCTTTCTTTCCTTCTT+TGG + Chr7:93696374-93696393 MsG0780041668.01.T01:intron 25.0%
! ACATTATCTATCACTCTATT+AGG + Chr7:93700949-93700968 MsG0780041668.01.T01:three_prime_UTR 25.0%
! AGAGATTAATCAAGATGAAA+GGG + Chr7:93697983-93698002 MsG0780041668.01.T01:five_prime_UTR 25.0%
! ATACCAAATAGGAAAATTAG+TGG - Chr7:93699737-93699756 None:intergenic 25.0%
! ATGAAATACAGTTGAACTTT+AGG + Chr7:93697544-93697563 MsG0780041668.01.T01:intron 25.0%
! ATTAACACACAAGAATAAGA+AGG - Chr7:93700621-93700640 None:intergenic 25.0%
! CAAGGATCTTATATATAAAC+CGG + Chr7:93696028-93696047 MsG0780041668.01.T01:intron 25.0%
! CATCATTAAATCACTATTCA+TGG - Chr7:93699555-93699574 None:intergenic 25.0%
! CATTACATAATAATGCACTT+AGG - Chr7:93698509-93698528 None:intergenic 25.0%
! CTACAAGATAACATTACATT+AGG + Chr7:93697707-93697726 MsG0780041668.01.T01:intron 25.0%
! GATATTTAATATGAGACACA+TGG + Chr7:93697325-93697344 MsG0780041668.01.T01:intron 25.0%
! GTAGTAAATGAAAGTGATTA+AGG - Chr7:93696899-93696918 None:intergenic 25.0%
! TAAGGAAAATAACTTACTGA+TGG - Chr7:93696881-93696900 None:intergenic 25.0%
! TACTATAAAAAGTTGGAAAG+TGG - Chr7:93697818-93697837 None:intergenic 25.0%
! TATTTCTCATTCCATCTATA+AGG - Chr7:93700868-93700887 None:intergenic 25.0%
! TGAAATACAGTTGAACTTTA+GGG + Chr7:93697545-93697564 MsG0780041668.01.T01:intron 25.0%
! TTAATCCATGATATCATTGA+TGG + Chr7:93699421-93699440 MsG0780041668.01.T01:intron 25.0%
! TTCATTATACAAAGGTAAGA+AGG + Chr7:93700705-93700724 MsG0780041668.01.T01:three_prime_UTR 25.0%
! TTCTTCATATAGCAGTTAAA+AGG - Chr7:93697406-93697425 None:intergenic 25.0%
! TTGTGCTTTACATCTATAAA+TGG + Chr7:93699787-93699806 MsG0780041668.01.T01:intron 25.0%
! TTTAGGAAACTACTATCATT+TGG + Chr7:93698454-93698473 MsG0780041668.01.T01:intron 25.0%
!! CTTGATGAGTATGAAATTTT+AGG + Chr7:93697587-93697606 MsG0780041668.01.T01:intron 25.0%
!! TGTTAATTTTCTTATGGCTA+CGG + Chr7:93700800-93700819 MsG0780041668.01.T01:three_prime_UTR 25.0%
!! TTGCCATAATTATCATTTTC+AGG + Chr7:93699575-93699594 MsG0780041668.01.T01:intron 25.0%
!!! ACTGTGAAGTTTTGTTAAAA+TGG - Chr7:93698960-93698979 None:intergenic 25.0%
!!! CTGTATTGTTTCTTTGATTT+TGG + Chr7:93696774-93696793 MsG0780041668.01.T01:five_prime_UTR 25.0%
!!! TCCACTTGTTAATTTTCTTA+TGG + Chr7:93700794-93700813 MsG0780041668.01.T01:three_prime_UTR 25.0%
!!! TCTAATGTCTTGTTTGTTTT+AGG + Chr7:93698437-93698456 MsG0780041668.01.T01:intron 25.0%
!!! TTGCATTTATTTTTTGCAGT+TGG + Chr7:93696492-93696511 MsG0780041668.01.T01:five_prime_UTR 25.0%
AAATGGAGCCATTAAATCAA+AGG + Chr7:93696653-93696672 MsG0780041668.01.T01:five_prime_UTR 30.0%
AACCAAATGTTATTGAGGTT+TGG - Chr7:93700543-93700562 None:intergenic 30.0%
AATGATTAAGAAACATACCC+AGG - Chr7:93698258-93698277 None:intergenic 30.0%
AATGTGTCAAAAATGCACTT+AGG - Chr7:93698556-93698575 None:intergenic 30.0%
ACAAACAAAGAACAAGAAGA+AGG - Chr7:93696307-93696326 None:intergenic 30.0%
ACACGTGTACTATAAAAAGT+TGG - Chr7:93697825-93697844 None:intergenic 30.0%
ACATTGAGTTCATTTGATTC+AGG + Chr7:93700642-93700661 MsG0780041668.01.T01:intron 30.0%
ACCAAATGTTATTGAGGTTT+GGG - Chr7:93700542-93700561 None:intergenic 30.0%
ACCAGCATATATATGTGTAT+TGG + Chr7:93700039-93700058 MsG0780041668.01.T01:intron 30.0%
ACTATCTTAGAAGTTGTGTT+GGG - Chr7:93695961-93695980 None:intergenic 30.0%
AGAAGAATAGGTTTATGTTC+AGG - Chr7:93699252-93699271 None:intergenic 30.0%
AGCCTAGTATTAAGAGAAAA+TGG + Chr7:93696950-93696969 MsG0780041668.01.T01:intron 30.0%
ATAGATGGAATGAGAAATAC+TGG + Chr7:93700869-93700888 MsG0780041668.01.T01:three_prime_UTR 30.0%
ATTAATGTTAGGAAGACAGT+AGG - Chr7:93697073-93697092 None:intergenic 30.0%
ATTACTTATGTTTGTGAGCT+TGG + Chr7:93699837-93699856 MsG0780041668.01.T01:intron 30.0%
ATTATACGTCGAAGCATATA+TGG + Chr7:93699141-93699160 MsG0780041668.01.T01:three_prime_UTR 30.0%
ATTTGGTATAGAAGACTAAG+TGG + Chr7:93699748-93699767 MsG0780041668.01.T01:intron 30.0%
CAAGATAGGAGTAATTTCAA+TGG + Chr7:93700728-93700747 MsG0780041668.01.T01:three_prime_UTR 30.0%
CACATTCTGACTTTATACTT+TGG - Chr7:93700199-93700218 None:intergenic 30.0%
CAGCCTGAAAATGATAATTA+TGG - Chr7:93699581-93699600 None:intergenic 30.0%
CATGTTCATGCATAAAGAAA+AGG + Chr7:93696624-93696643 MsG0780041668.01.T01:intron 30.0%
GAAGGAAAGAAAGAAATTCA+CGG - Chr7:93696372-93696391 None:intergenic 30.0%
GACACAAGAATAAGAAGAAT+AGG - Chr7:93699264-93699283 None:intergenic 30.0%
GCCATAAGAAAATTAACAAG+TGG - Chr7:93700798-93700817 None:intergenic 30.0%
GCCTAGTATTAAGAGAAAAT+GGG + Chr7:93696951-93696970 MsG0780041668.01.T01:intron 30.0%
TAAAAATGGACCATAGGATT+TGG - Chr7:93700296-93700315 None:intergenic 30.0%
TAAAGAAAAGGAGAGTGAAA+TGG + Chr7:93696636-93696655 MsG0780041668.01.T01:intron 30.0%
TACTATCTTAGAAGTTGTGT+TGG - Chr7:93695962-93695981 None:intergenic 30.0%
TAGACAACCAAATGTTATTG+AGG - Chr7:93700548-93700567 None:intergenic 30.0%
TATTGTAGAAGTTAGTGACA+AGG - Chr7:93698876-93698895 None:intergenic 30.0%
TCAAGTGCACAAACATAAAT+AGG - Chr7:93699991-93700010 None:intergenic 30.0%
TCACCTTAAATCTAACTCAA+AGG + Chr7:93695784-93695803 MsG0780041668.01.T03:five_prime_UTR 30.0%
TCCAATACACATATATATGC+TGG - Chr7:93700043-93700062 None:intergenic 30.0%
TCTACTACATTATAGAGTCT+TGG + Chr7:93698315-93698334 MsG0780041668.01.T01:intron 30.0%
TCTCTCATGAAACAAAACAT+TGG - Chr7:93699491-93699510 None:intergenic 30.0%
TGGGTATGTTTCTTAATCAT+TGG + Chr7:93698257-93698276 MsG0780041668.01.T01:intron 30.0%
TGTCACTAACTTCTACAATA+GGG + Chr7:93698876-93698895 MsG0780041668.01.T01:CDS 30.0%
TTAATACTAGGCTAGAAACT+AGG - Chr7:93696943-93696962 None:intergenic 30.0%
TTATACGTCGAAGCATATAT+GGG + Chr7:93699142-93699161 MsG0780041668.01.T01:three_prime_UTR 30.0%
TTGCAGTTGGAAAAATCATA+GGG + Chr7:93696505-93696524 MsG0780041668.01.T01:five_prime_UTR 30.0%
TTGGAAAAATCATAGGGATA+TGG + Chr7:93696511-93696530 MsG0780041668.01.T01:five_prime_UTR 30.0%
TTGTCACTAACTTCTACAAT+AGG + Chr7:93698875-93698894 MsG0780041668.01.T01:CDS 30.0%
TTTGCAGTTGGAAAAATCAT+AGG + Chr7:93696504-93696523 MsG0780041668.01.T01:five_prime_UTR 30.0%
! CTTAGTCTTCTATACCAAAT+AGG - Chr7:93699748-93699767 None:intergenic 30.0%
! CTTTTCCATCAATGATATCA+TGG - Chr7:93699429-93699448 None:intergenic 30.0%
! CTTTTCTTTATGCATGAACA+TGG - Chr7:93696626-93696645 None:intergenic 30.0%
! GTACCTTTGAGTTAGATTTA+AGG - Chr7:93695790-93695809 None:intergenic 30.0%
! GTAGTAGACCTTTGATTTAA+TGG - Chr7:93696664-93696683 None:intergenic 30.0%
! TCCCATTTTCTCTTAATACT+AGG - Chr7:93696955-93696974 None:intergenic 30.0%
! TCTCCACTAATTTTCCTATT+TGG + Chr7:93699731-93699750 MsG0780041668.01.T01:intron 30.0%
!! TAGAATCCAAGTTCACTTTT+TGG + Chr7:93699965-93699984 MsG0780041668.01.T01:intron 30.0%
!!! TCTTTGATTTTGGCTATTCT+TGG + Chr7:93696784-93696803 MsG0780041668.01.T01:five_prime_UTR 30.0%
!!! TGATTTTTTTGTTGGAGCTT+TGG + Chr7:93700827-93700846 MsG0780041668.01.T01:three_prime_UTR 30.0%
!!! TTTTTTACTGGCATGTACAA+TGG - Chr7:93701073-93701092 None:intergenic 30.0%
AAGCAATTACGCATTTGACA+CGG + Chr7:93700113-93700132 MsG0780041668.01.T01:intron 35.0%
AAGTTGCATGTGTATTCAGT+CGG - Chr7:93699624-93699643 None:intergenic 35.0%
AATAGGCCAAAAAGTGAACT+TGG - Chr7:93699974-93699993 None:intergenic 35.0%
AATGTATGATGCAGGATATG+GGG + Chr7:93699284-93699303 MsG0780041668.01.T01:intron 35.0%
ACGTAACAAAAAGAAGTGAG+TGG - Chr7:93695753-93695772 None:intergenic 35.0%
AGCATGTAAAAATGGACCAT+AGG - Chr7:93700302-93700321 None:intergenic 35.0%
AGTAAGTGCTTATGGAAACT+TGG + Chr7:93698062-93698081 MsG0780041668.01.T01:five_prime_UTR 35.0%
ATAAAGCATGTGAATGAGAG+TGG + Chr7:93700468-93700487 MsG0780041668.01.T01:three_prime_UTR 35.0%
ATGTTATCTTGTAGCAAGTG+CGG - Chr7:93697701-93697720 None:intergenic 35.0%
ATTAGTGGAGAGTTAACCTT+TGG - Chr7:93699722-93699741 None:intergenic 35.0%
ATTGAGGATGCATTGAGTAA+AGG + Chr7:93699098-93699117 MsG0780041668.01.T01:three_prime_UTR 35.0%
CAACCAACAACCGATATAAA+CGG + Chr7:93699326-93699345 MsG0780041668.01.T01:three_prime_UTR 35.0%
CAAGATTTAGTTGGACAAAC+CGG - Chr7:93699878-93699897 None:intergenic 35.0%
CAATGTATGATGCAGGATAT+GGG + Chr7:93699283-93699302 MsG0780041668.01.T01:intron 35.0%
CACAAGACTTCCGTTTATAT+CGG - Chr7:93699339-93699358 None:intergenic 35.0%
CACATGCAACTTATTGAATG+AGG + Chr7:93699632-93699651 MsG0780041668.01.T01:three_prime_UTR 35.0%
CCACTTAGAAGAATACTCTT+TGG - Chr7:93700683-93700702 None:intergenic 35.0%
CGCATTCTAACTTGGTATAT+GGG + Chr7:93700172-93700191 MsG0780041668.01.T01:intron 35.0%
CTAAAAGGAACTTGACATTC+GGG - Chr7:93698763-93698782 None:intergenic 35.0%
GCTAAAAGGAACTTGACATT+CGG - Chr7:93698764-93698783 None:intergenic 35.0%
GGAAAATAACTTACTGATGG+TGG - Chr7:93696878-93696897 None:intergenic 35.0%
GGATATGCAGATTCATAGAA+TGG - Chr7:93698939-93698958 None:intergenic 35.0%
GTTGGTTGCAAATAATTCCA+CGG - Chr7:93699314-93699333 None:intergenic 35.0%
TATCTTTGCTTTACTCAGCT+TGG + Chr7:93698006-93698025 MsG0780041668.01.T01:five_prime_UTR 35.0%
TATGAGACAAAAAGGCTTTG+TGG + Chr7:93696099-93696118 MsG0780041668.01.T01:intron 35.0%
TCAATGTATGATGCAGGATA+TGG + Chr7:93699282-93699301 MsG0780041668.01.T01:intron 35.0%
TCCCAAACCTCAATAACATT+TGG + Chr7:93700538-93700557 MsG0780041668.01.T01:three_prime_UTR 35.0%
TCGCATTCTAACTTGGTATA+TGG + Chr7:93700171-93700190 MsG0780041668.01.T01:intron 35.0%
TCTTTCTTTCCTTCTTTGGT+TGG + Chr7:93696378-93696397 MsG0780041668.01.T01:intron 35.0%
TTATGTTCAGGACCTTGTTA+CGG - Chr7:93699240-93699259 None:intergenic 35.0%
! AATACAGTTGAACTTTAGGG+AGG + Chr7:93697548-93697567 MsG0780041668.01.T01:intron 35.0%
! AATTTCCAATGTGGAGCATT+AGG - Chr7:93698107-93698126 None:intergenic 35.0%
! CACTTACTTCTCTCAGTTTT+AGG - Chr7:93698050-93698069 None:intergenic 35.0%
! GATCCTTTTCTATTCTCCAT+TGG + Chr7:93695721-93695740 MsG0780041668.01.T03:five_prime_UTR 35.0%
! GATTGATTGATTCCGTAACA+AGG + Chr7:93699225-93699244 MsG0780041668.01.T01:intron 35.0%
! TACTACTACTGCACTTGTTT+TGG + Chr7:93700586-93700605 MsG0780041668.01.T01:intron 35.0%
! TGTCTTACACAAAGTGCTTA+TGG + Chr7:93696208-93696227 MsG0780041668.01.T01:five_prime_UTR 35.0%
! TTGGCTATTCTTGGTAACTT+TGG + Chr7:93696793-93696812 MsG0780041668.01.T01:five_prime_UTR 35.0%
!! AACAAGGACAGATTTTGGTA+GGG + Chr7:93700922-93700941 MsG0780041668.01.T01:three_prime_UTR 35.0%
!! CCAAAGAGTATTCTTCTAAG+TGG + Chr7:93700680-93700699 MsG0780041668.01.T01:three_prime_UTR 35.0%
!! CTTGCTATTGCAATCAATGA+AGG + Chr7:93698844-93698863 MsG0780041668.01.T01:CDS 35.0%
!!! ACGGACTCTGATTTTTTTGT+TGG + Chr7:93700819-93700838 MsG0780041668.01.T01:three_prime_UTR 35.0%
!!! TTGTCATGTATTTTGACCTC+TGG + Chr7:93700328-93700347 MsG0780041668.01.T01:intron 35.0%
AAGTAACAGCCAACCAAAGA+AGG - Chr7:93696390-93696409 None:intergenic 40.0%
AATCCTTTCCTACTTGTCCA+TGG - Chr7:93698192-93698211 None:intergenic 40.0%
ACCAAGGAATCCAAATCCTA+TGG + Chr7:93700283-93700302 MsG0780041668.01.T01:intron 40.0%
ACCATAGGATTTGGATTCCT+TGG - Chr7:93700287-93700306 None:intergenic 40.0%
AGAAAGTTCAACGCGACATA+TGG + Chr7:93698709-93698728 MsG0780041668.01.T01:intron 40.0%
AGATTACCTGGATTTGGCAT+TGG + Chr7:93698794-93698813 MsG0780041668.01.T01:CDS 40.0%
AGGCTGTACGTTACTTAATG+AGG + Chr7:93699595-93699614 MsG0780041668.01.T01:intron 40.0%
AGTAGCAATTCCAGCTAGAT+CGG - Chr7:93699025-93699044 None:intergenic 40.0%
AGTTGCATGTGTATTCAGTC+GGG - Chr7:93699623-93699642 None:intergenic 40.0%
ATTTAGCTGGAGAAGCTAGA+CGG + Chr7:93699937-93699956 MsG0780041668.01.T01:intron 40.0%
CAAAGGTAAGAAGGCAAGAT+AGG + Chr7:93700714-93700733 MsG0780041668.01.T01:three_prime_UTR 40.0%
CAAGTTAGAATGCGATCATC+TGG - Chr7:93700166-93700185 None:intergenic 40.0%
CAATCTAAACCACCTGATCA+AGG - Chr7:93700227-93700246 None:intergenic 40.0%
CACATCGAAAAATGGATCGA+CGG + Chr7:93699363-93699382 MsG0780041668.01.T01:three_prime_UTR 40.0%
CAGATGATCGCATTCTAACT+TGG + Chr7:93700164-93700183 MsG0780041668.01.T01:intron 40.0%
CAGTATTGCGAACATCTACT+TGG + Chr7:93698976-93698995 MsG0780041668.01.T01:intron 40.0%
CCAACTAAATCTTGGCTGTT+GGG + Chr7:93699884-93699903 MsG0780041668.01.T01:intron 40.0%
CCACCAATGGAGAATAGAAA+AGG - Chr7:93695727-93695746 None:intergenic 40.0%
CGATATAAACGGAAGTCTTG+TGG + Chr7:93699337-93699356 MsG0780041668.01.T01:three_prime_UTR 40.0%
CGGTTTGTCCAACTAAATCT+TGG + Chr7:93699876-93699895 MsG0780041668.01.T01:intron 40.0%
CTAAGCATGCATGTAAGGAT+GGG + Chr7:93700443-93700462 MsG0780041668.01.T01:three_prime_UTR 40.0%
CTCTTCTAAGCATGCATGTA+AGG + Chr7:93700438-93700457 MsG0780041668.01.T01:three_prime_UTR 40.0%
CTGAGAGAAGTAAGTGCTTA+TGG + Chr7:93698054-93698073 MsG0780041668.01.T01:five_prime_UTR 40.0%
CTTACATGCATGCTTAGAAG+AGG - Chr7:93700440-93700459 None:intergenic 40.0%
CTTGATCAGGTGGTTTAGAT+TGG + Chr7:93700225-93700244 MsG0780041668.01.T01:intron 40.0%
CTTGTGTCAATGTATGATGC+AGG + Chr7:93699276-93699295 MsG0780041668.01.T01:intron 40.0%
GAAATGATTCCTTTCCACCA+TGG + Chr7:93698172-93698191 MsG0780041668.01.T01:five_prime_UTR 40.0%
GAATGAGAAATACTGGTGGA+AGG + Chr7:93700876-93700895 MsG0780041668.01.T01:three_prime_UTR 40.0%
GATGGAATGAGAAATACTGG+TGG + Chr7:93700872-93700891 MsG0780041668.01.T01:three_prime_UTR 40.0%
GATTAAGAAACATACCCAGG+TGG - Chr7:93698255-93698274 None:intergenic 40.0%
GCATAGAAAAGTGAGCAAAC+TGG - Chr7:93696825-93696844 None:intergenic 40.0%
GTATCCGAGTCTTTCTATTC+AGG + Chr7:93695979-93695998 MsG0780041668.01.T01:five_prime_UTR 40.0%
GTTGGAACTCGTGAAAATTG+AGG + Chr7:93699082-93699101 MsG0780041668.01.T01:three_prime_UTR 40.0%
TAAGATCCTTGACCTCATGA+AGG - Chr7:93696019-93696038 None:intergenic 40.0%
TACAATAGGGCTGATCATGA+TGG + Chr7:93698889-93698908 MsG0780041668.01.T01:CDS 40.0%
TCCAACTAAATCTTGGCTGT+TGG + Chr7:93699883-93699902 MsG0780041668.01.T01:intron 40.0%
TCTAAGCATGCATGTAAGGA+TGG + Chr7:93700442-93700461 MsG0780041668.01.T01:three_prime_UTR 40.0%
TCTTAGCAGAAACAGTGAGT+CGG - Chr7:93696133-93696152 None:intergenic 40.0%
TGAGAGAGTGGTTTCTCAAA+GGG + Chr7:93696690-93696709 MsG0780041668.01.T01:five_prime_UTR 40.0%
TGGAAAAATGGCTGCGAAAA+TGG + Chr7:93699670-93699689 MsG0780041668.01.T01:three_prime_UTR 40.0%
TGTGGCTTCACATCGAAAAA+TGG + Chr7:93699355-93699374 MsG0780041668.01.T01:three_prime_UTR 40.0%
TTGAGAGAGTGGTTTCTCAA+AGG + Chr7:93696689-93696708 MsG0780041668.01.T01:five_prime_UTR 40.0%
TTGGATTCTCTGTATCTGTC+CGG + Chr7:93699856-93699875 MsG0780041668.01.T01:intron 40.0%
! AGAAGCTTTTGCAGATTGCA+GGG + Chr7:93698659-93698678 MsG0780041668.01.T01:intron 40.0%
! CCTTTTCTATTCTCCATTGG+TGG + Chr7:93695724-93695743 MsG0780041668.01.T03:five_prime_UTR 40.0%
! CTTCCGTTTATATCGGTTGT+TGG - Chr7:93699332-93699351 None:intergenic 40.0%
! TAGAAGCTTTTGCAGATTGC+AGG + Chr7:93698658-93698677 MsG0780041668.01.T01:intron 40.0%
!! ACTTGGTGCTTCCTTATAGA+TGG + Chr7:93700854-93700873 MsG0780041668.01.T01:three_prime_UTR 40.0%
!! CAACAAGGACAGATTTTGGT+AGG + Chr7:93700921-93700940 MsG0780041668.01.T01:three_prime_UTR 40.0%
!! CAAGTTCCTTTTAGCTGACT+GGG + Chr7:93698769-93698788 MsG0780041668.01.T01:CDS 40.0%
!! TCAAGTTCCTTTTAGCTGAC+TGG + Chr7:93698768-93698787 MsG0780041668.01.T01:CDS 40.0%
!! TGCAGCTTGCTGATAGAATT+AGG + Chr7:93700509-93700528 MsG0780041668.01.T01:three_prime_UTR 40.0%
!!! TGTGCTGTTGCACTTTTTTG+TGG + Chr7:93696748-93696767 MsG0780041668.01.T01:five_prime_UTR 40.0%
!!! TTTTCGCAGCCATTTTTCCA+AGG - Chr7:93699670-93699689 None:intergenic 40.0%
AAATCTTGGCTGTTGGGTCT+AGG + Chr7:93699890-93699909 MsG0780041668.01.T01:intron 45.0%
ACTCATGTAAGGCCTTCATG+AGG + Chr7:93696004-93696023 MsG0780041668.01.T01:five_prime_UTR 45.0%
ACTTGCCTAATGCTCCACAT+TGG + Chr7:93698099-93698118 MsG0780041668.01.T01:five_prime_UTR 45.0%
ACTTGGAATGTTGCTCATGC+AGG + Chr7:93698993-93699012 MsG0780041668.01.T01:intron 45.0%
AGAAAAGGATCACCTGCCTA+TGG - Chr7:93695712-93695731 None:intergenic 45.0%
ATCGAAAAATGGATCGACGG+TGG + Chr7:93699366-93699385 MsG0780041668.01.T01:three_prime_UTR 45.0%
ATCTCTCCCAGTCAGCTAAA+AGG - Chr7:93698778-93698797 None:intergenic 45.0%
ATGCATGCTTAGAAGAGGTC+TGG - Chr7:93700435-93700454 None:intergenic 45.0%
ATGCGTAATTGCTTGAGTGC+AGG - Chr7:93700075-93700094 None:intergenic 45.0%
ATGGCCCACAAGTTTCTTTG+AGG + Chr7:93696530-93696549 MsG0780041668.01.T01:five_prime_UTR 45.0%
CCCAACAGCCAAGATTTAGT+TGG - Chr7:93699887-93699906 None:intergenic 45.0%
CCTTGGTACTCATGCAATCA+CGG - Chr7:93700270-93700289 None:intergenic 45.0%
CTATTCAGGCCACTCATGTA+AGG + Chr7:93695993-93696012 MsG0780041668.01.T01:five_prime_UTR 45.0%
CTTGGAATGTTGCTCATGCA+GGG + Chr7:93698994-93699013 MsG0780041668.01.T01:intron 45.0%
GCAACAGCACATATCTGACA+TGG - Chr7:93696739-93696758 None:intergenic 45.0%
GCATGCAGAGTAGATACTTG+AGG + Chr7:93698591-93698610 MsG0780041668.01.T01:intron 45.0%
GCCACCTCAAAGAAACTTGT+GGG - Chr7:93696537-93696556 None:intergenic 45.0%
GCTCAAATTGCTGGAATGTG+TGG + Chr7:93698818-93698837 MsG0780041668.01.T01:CDS 45.0%
GTAGCAATTCCAGCTAGATC+GGG - Chr7:93699024-93699043 None:intergenic 45.0%
GTGGCCTGAATAGAAAGACT+CGG - Chr7:93695986-93696005 None:intergenic 45.0%
GTTCTTGTGAAAGCTTGCCT+TGG - Chr7:93699179-93699198 None:intergenic 45.0%
TACCCTCAGATACAGCAAGA+GGG - Chr7:93698227-93698246 None:intergenic 45.0%
TACTACTCCTCTTGAGAGAG+TGG + Chr7:93696678-93696697 MsG0780041668.01.T01:five_prime_UTR 45.0%
TCATGAAGGCCTTACATGAG+TGG - Chr7:93696005-93696024 None:intergenic 45.0%
TCGCGTTGCAATTTCCAATG+TGG - Chr7:93698116-93698135 None:intergenic 45.0%
TGAGAAACCACTCTCTCAAG+AGG - Chr7:93696688-93696707 None:intergenic 45.0%
TGCATGCTTAGAAGAGGTCT+GGG - Chr7:93700434-93700453 None:intergenic 45.0%
TGCCACCTCAAAGAAACTTG+TGG - Chr7:93696538-93696557 None:intergenic 45.0%
TGGGAGAGATTACCTGGATT+TGG + Chr7:93698788-93698807 MsG0780041668.01.T01:CDS 45.0%
TTACCCTCAGATACAGCAAG+AGG - Chr7:93698228-93698247 None:intergenic 45.0%
TTGGTTGTCTACAGAGATGC+AGG + Chr7:93700557-93700576 MsG0780041668.01.T01:three_prime_UTR 45.0%
! ATGTGGAGCATTAGGCAAGT+TGG - Chr7:93698099-93698118 None:intergenic 45.0%
! GCGTCAACAAGGACAGATTT+TGG + Chr7:93700917-93700936 MsG0780041668.01.T01:three_prime_UTR 45.0%
! GCGTTGAACTTTCTAGTCAG+AGG - Chr7:93698703-93698722 None:intergenic 45.0%
! GTTGGAGCTTTGGTTCAACT+TGG + Chr7:93700837-93700856 MsG0780041668.01.T01:three_prime_UTR 45.0%
AAGTGAGTGGCAACCACCAA+TGG - Chr7:93695740-93695759 None:intergenic 50.0%
ACCCTCAGATACAGCAAGAG+GGG - Chr7:93698226-93698245 None:intergenic 50.0%
ACGTCGAAGCATATATGGGC+AGG + Chr7:93699146-93699165 MsG0780041668.01.T01:three_prime_UTR 50.0%
AGATGCCTCAGGAGGAGAAT+GGG + Chr7:93700351-93700370 MsG0780041668.01.T01:intron 50.0%
ATGGTCCAATCACAAGCCCT+GGG + Chr7:93700407-93700426 MsG0780041668.01.T01:three_prime_UTR 50.0%
CAAGTGCGGTCTGAGTCAAA+AGG - Chr7:93697687-93697706 None:intergenic 50.0%
CCACCATGGACAAGTAGGAA+AGG + Chr7:93698186-93698205 MsG0780041668.01.T01:five_prime_UTR 50.0%
CCGTGATTGCATGAGTACCA+AGG + Chr7:93700267-93700286 MsG0780041668.01.T01:intron 50.0%
CCTTTCCACCATGGACAAGT+AGG + Chr7:93698181-93698200 MsG0780041668.01.T01:five_prime_UTR 50.0%
CCTTTCCTACTTGTCCATGG+TGG - Chr7:93698189-93698208 None:intergenic 50.0%
CTGAGGGTAATCATCCACCT+GGG + Chr7:93698238-93698257 MsG0780041668.01.T01:five_prime_UTR 50.0%
GAAAAATGGATCGACGGTGG+TGG + Chr7:93699369-93699388 MsG0780041668.01.T01:three_prime_UTR 50.0%
GAATGTGAGCGACCTTGATC+AGG + Chr7:93700212-93700231 MsG0780041668.01.T01:intron 50.0%
GCCATGCTGCCTTGGAAAAA+TGG + Chr7:93699658-93699677 MsG0780041668.01.T01:three_prime_UTR 50.0%
GCTGATCATGATGGCTGCAA+GGG + Chr7:93698898-93698917 MsG0780041668.01.T01:CDS 50.0%
GTAAGGCCTTCATGAGGTCA+AGG + Chr7:93696010-93696029 MsG0780041668.01.T01:intron 50.0%
GTGAAAGCTTGCCTTGGAGT+TGG - Chr7:93699173-93699192 None:intergenic 50.0%
TACTGGTGGAAGGTCATGTC+TGG + Chr7:93700886-93700905 MsG0780041668.01.T01:three_prime_UTR 50.0%
TATGGTCCAATCACAAGCCC+TGG + Chr7:93700406-93700425 MsG0780041668.01.T01:three_prime_UTR 50.0%
TCCAACGTGCGACATTTAGC+TGG + Chr7:93699924-93699943 MsG0780041668.01.T01:intron 50.0%
TCCAGCTAAATGTCGCACGT+TGG - Chr7:93699928-93699947 None:intergenic 50.0%
TCTGAGGGTAATCATCCACC+TGG + Chr7:93698237-93698256 MsG0780041668.01.T01:five_prime_UTR 50.0%
TGAGCTCCAATGCCAAATCC+AGG - Chr7:93698803-93698822 None:intergenic 50.0%
TGCATAACCGTCTCGACACA+CGG + Chr7:93698145-93698164 MsG0780041668.01.T01:five_prime_UTR 50.0%
TGGCTACTTGAGCGTCAACA+AGG + Chr7:93700906-93700925 MsG0780041668.01.T01:three_prime_UTR 50.0%
TTCCTATCCGTGTGTCGAGA+CGG - Chr7:93698155-93698174 None:intergenic 50.0%
TTCGGGTCGCTACAGTTTGA+TGG - Chr7:93698746-93698765 None:intergenic 50.0%
TTCTACCCATTCTCCTCCTG+AGG - Chr7:93700359-93700378 None:intergenic 50.0%
! AGTATGAAGCTAGCCTGGGA+AGG + Chr7:93700754-93700773 MsG0780041668.01.T01:three_prime_UTR 50.0%
! ATTGGTGTCCCCGTGAATCA+CGG + Chr7:93700243-93700262 MsG0780041668.01.T01:intron 50.0%
! CCTACTTGTCCATGGTGGAA+AGG - Chr7:93698184-93698203 None:intergenic 50.0%
! GCCCACAAGTTTCTTTGAGG+TGG + Chr7:93696533-93696552 MsG0780041668.01.T01:intron 50.0%
! GCTGAGTATGAAGCTAGCCT+GGG + Chr7:93700750-93700769 MsG0780041668.01.T01:three_prime_UTR 50.0%
! GGCATTGGAGCTCAAATTGC+TGG + Chr7:93698809-93698828 MsG0780041668.01.T01:CDS 50.0%
! GTATGAAGCTAGCCTGGGAA+GGG + Chr7:93700755-93700774 MsG0780041668.01.T01:three_prime_UTR 50.0%
!!! GCCATTTTTCCAAGGCAGCA+TGG - Chr7:93699662-93699681 None:intergenic 50.0%
AACCGTCTCGACACACGGAT+AGG + Chr7:93698150-93698169 MsG0780041668.01.T01:five_prime_UTR 55.0%
AATCACGGCCCGTGATTCAC+GGG - Chr7:93700255-93700274 None:intergenic 55.0%
AGAATGTCGCCAACGTGCGT+TGG + Chr7:93699064-93699083 MsG0780041668.01.T01:intron 55.0%
CAATCACGGCCCGTGATTCA+CGG - Chr7:93700256-93700275 None:intergenic 55.0%
CCCTCAGATACAGCAAGAGG+GGG - Chr7:93698225-93698244 None:intergenic 55.0%
GAGATGCCTCAGGAGGAGAA+TGG + Chr7:93700350-93700369 MsG0780041668.01.T01:intron 55.0%
GCTGACTGGGAGAGATTACC+TGG + Chr7:93698782-93698801 MsG0780041668.01.T01:CDS 55.0%
GGCTGAGTATGAAGCTAGCC+TGG + Chr7:93700749-93700768 MsG0780041668.01.T01:three_prime_UTR 55.0%
GGCTGATCATGATGGCTGCA+AGG + Chr7:93698897-93698916 MsG0780041668.01.T01:CDS 55.0%
TAGTGCTTCTCTCCCTTCCC+AGG - Chr7:93700770-93700789 None:intergenic 55.0%
TATGGGCAGGACCAACTCCA+AGG + Chr7:93699159-93699178 MsG0780041668.01.T01:three_prime_UTR 55.0%
TCACGAGTTCCAACGCACGT+TGG - Chr7:93699076-93699095 None:intergenic 55.0%
TGTGAGCGACCTTGATCAGG+TGG + Chr7:93700215-93700234 MsG0780041668.01.T01:intron 55.0%
! CCCCCTCTTGCTGTATCTGA+GGG + Chr7:93698222-93698241 MsG0780041668.01.T01:five_prime_UTR 55.0%
! TAGAAGAGGTCTGGGACCCA+GGG - Chr7:93700426-93700445 None:intergenic 55.0%
! TTAGAAGAGGTCTGGGACCC+AGG - Chr7:93700427-93700446 None:intergenic 55.0%
! TTGACCTCTGGAGATGCCTC+AGG + Chr7:93700340-93700359 MsG0780041668.01.T01:intron 55.0%
! TTGGTGTCCCCGTGAATCAC+GGG + Chr7:93700244-93700263 MsG0780041668.01.T01:intron 55.0%
ATCACGGCCCGTGATTCACG+GGG - Chr7:93700254-93700273 None:intergenic 60.0%
TGGGACCCAGGGCTTGTGAT+TGG - Chr7:93700415-93700434 None:intergenic 60.0%
! ACCTCTGGAGATGCCTCAGG+AGG + Chr7:93700343-93700362 MsG0780041668.01.T01:intron 60.0%
! GCCCCCTCTTGCTGTATCTG+AGG + Chr7:93698221-93698240 MsG0780041668.01.T01:five_prime_UTR 60.0%
! TCCTCCTGAGGCATCTCCAG+AGG - Chr7:93700347-93700366 None:intergenic 60.0%
CAGGGCTGTCCCGATCTAGC+TGG + Chr7:93699012-93699031 MsG0780041668.01.T01:intron 65.0%
GCAGGATATGGGGCGATCCG+TGG + Chr7:93699294-93699313 MsG0780041668.01.T01:intron 65.0%
!! TGAGGAGCGCCATGCTGCCT+TGG + Chr7:93699650-93699669 MsG0780041668.01.T01:three_prime_UTR 65.0%
! TCGACGGTGGTGGCGAGCAC+AGG + Chr7:93699379-93699398 MsG0780041668.01.T01:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 93695708 93701105 93695708 ID=MsG0780041668.01;Name=MsG0780041668.01
Chr7 mRNA 93695840 93701105 93695840 ID=MsG0780041668.01.T01;Parent=MsG0780041668.01;Name=MsG0780041668.01.T01;_AED=0.28;_eAED=0.28;_QI=1005|1|1|1|0.1|0|11|1005|80
Chr7 exon 93695840 93696025 93695840 ID=MsG0780041668.01.T01:exon:22197;Parent=MsG0780041668.01.T01
Chr7 exon 93696152 93696273 93696152 ID=MsG0780041668.01.T01:exon:22198;Parent=MsG0780041668.01.T01
Chr7 exon 93696488 93696551 93696488 ID=MsG0780041668.01.T01:exon:22199;Parent=MsG0780041668.01.T01
Chr7 exon 93696641 93696883 93696641 ID=MsG0780041668.01.T01:exon:22200;Parent=MsG0780041668.01.T01
Chr7 five_prime_UTR 93695840 93696025 93695840 ID=MsG0780041668.01.T01:five_prime_utr;Parent=MsG0780041668.01.T01
Chr7 five_prime_UTR 93696152 93696273 93696152 ID=MsG0780041668.01.T01:five_prime_utr;Parent=MsG0780041668.01.T01
Chr7 five_prime_UTR 93696488 93696551 93696488 ID=MsG0780041668.01.T01:five_prime_utr;Parent=MsG0780041668.01.T01
Chr7 five_prime_UTR 93696641 93696883 93696641 ID=MsG0780041668.01.T01:five_prime_utr;Parent=MsG0780041668.01.T01
Chr7 five_prime_UTR 93697925 93698259 93697925 ID=MsG0780041668.01.T01:five_prime_utr;Parent=MsG0780041668.01.T01
Chr7 five_prime_UTR 93698673 93698727 93698673 ID=MsG0780041668.01.T01:five_prime_utr;Parent=MsG0780041668.01.T01
Chr7 CDS 93698728 93698919 93698728 ID=MsG0780041668.01.T01:cds;Parent=MsG0780041668.01.T01
Chr7 CDS 93699015 93699065 93699015 ID=MsG0780041668.01.T01:cds;Parent=MsG0780041668.01.T01
Chr7 three_prime_UTR 93699066 93699180 93699066 ID=MsG0780041668.01.T01:three_prime_utr;Parent=MsG0780041668.01.T01
Chr7 three_prime_UTR 93699298 93699400 93699298 ID=MsG0780041668.01.T01:three_prime_utr;Parent=MsG0780041668.01.T01
Chr7 three_prime_UTR 93699597 93699724 93699597 ID=MsG0780041668.01.T01:three_prime_utr;Parent=MsG0780041668.01.T01
Chr7 three_prime_UTR 93700362 93700578 93700362 ID=MsG0780041668.01.T01:three_prime_utr;Parent=MsG0780041668.01.T01
Chr7 three_prime_UTR 93700664 93701105 93700664 ID=MsG0780041668.01.T01:three_prime_utr;Parent=MsG0780041668.01.T01
Chr7 mRNA 93696068 93701104 93696068 ID=MsG0780041668.01.T02;Parent=MsG0780041668.01;Name=MsG0780041668.01.T02;_AED=0.29;_eAED=0.29;_QI=969|1|1|1|0.12|0|9|1004|80
Chr7 five_prime_UTR 93696068 93696273 93696068 ID=MsG0780041668.01.T02:five_prime_utr;Parent=MsG0780041668.01.T02
Chr7 five_prime_UTR 93696511 93696883 93696511 ID=MsG0780041668.01.T02:five_prime_utr;Parent=MsG0780041668.01.T02
Chr7 five_prime_UTR 93697925 93698259 93697925 ID=MsG0780041668.01.T02:five_prime_utr;Parent=MsG0780041668.01.T02
Chr7 five_prime_UTR 93698673 93698727 93698673 ID=MsG0780041668.01.T02:five_prime_utr;Parent=MsG0780041668.01.T02
Chr7 CDS 93698728 93698919 93698728 ID=MsG0780041668.01.T02:cds;Parent=MsG0780041668.01.T02
Chr7 CDS 93699015 93699065 93699015 ID=MsG0780041668.01.T02:cds;Parent=MsG0780041668.01.T02
Chr7 three_prime_UTR 93699066 93699180 93699066 ID=MsG0780041668.01.T02:three_prime_utr;Parent=MsG0780041668.01.T02
Chr7 three_prime_UTR 93699298 93699400 93699298 ID=MsG0780041668.01.T02:three_prime_utr;Parent=MsG0780041668.01.T02
Chr7 three_prime_UTR 93699597 93699724 93699597 ID=MsG0780041668.01.T02:three_prime_utr;Parent=MsG0780041668.01.T02
Chr7 three_prime_UTR 93700362 93700578 93700362 ID=MsG0780041668.01.T02:three_prime_utr;Parent=MsG0780041668.01.T02
Chr7 three_prime_UTR 93700664 93701104 93700664 ID=MsG0780041668.01.T02:three_prime_utr;Parent=MsG0780041668.01.T02
Chr7 mRNA 93695708 93701104 93695708 ID=MsG0780041668.01.T03;Parent=MsG0780041668.01;Name=MsG0780041668.01.T03;_AED=0.30;_eAED=0.30;_QI=861|1|1|1|0.12|0|9|1004|80
Chr7 exon 93695708 93695805 93695708 ID=MsG0780041668.01.T03:exon:22211;Parent=MsG0780041668.01.T03
Chr7 five_prime_UTR 93695708 93695805 93695708 ID=MsG0780041668.01.T03:five_prime_utr;Parent=MsG0780041668.01.T03
Chr7 five_prime_UTR 93696511 93696883 93696511 ID=MsG0780041668.01.T03:five_prime_utr;Parent=MsG0780041668.01.T03
Chr7 five_prime_UTR 93697925 93698259 93697925 ID=MsG0780041668.01.T03:five_prime_utr;Parent=MsG0780041668.01.T03
Chr7 five_prime_UTR 93698673 93698727 93698673 ID=MsG0780041668.01.T03:five_prime_utr;Parent=MsG0780041668.01.T03
Chr7 CDS 93698728 93698919 93698728 ID=MsG0780041668.01.T03:cds;Parent=MsG0780041668.01.T03
Chr7 CDS 93699015 93699065 93699015 ID=MsG0780041668.01.T03:cds;Parent=MsG0780041668.01.T03
Chr7 three_prime_UTR 93699066 93699180 93699066 ID=MsG0780041668.01.T03:three_prime_utr;Parent=MsG0780041668.01.T03
Chr7 three_prime_UTR 93699298 93699400 93699298 ID=MsG0780041668.01.T03:three_prime_utr;Parent=MsG0780041668.01.T03
Chr7 three_prime_UTR 93699597 93699724 93699597 ID=MsG0780041668.01.T03:three_prime_utr;Parent=MsG0780041668.01.T03
Chr7 three_prime_UTR 93700362 93700578 93700362 ID=MsG0780041668.01.T03:three_prime_utr;Parent=MsG0780041668.01.T03
Chr7 three_prime_UTR 93700664 93701104 93700664 ID=MsG0780041668.01.T03:three_prime_utr;Parent=MsG0780041668.01.T03
Chr7 mRNA 93696068 93701105 93696068 ID=MsG0780041668.01.T04;Parent=MsG0780041668.01;Name=MsG0780041668.01.T04;_AED=0.19;_eAED=0.19;_QI=2010|1|1|1|0.14|0|8|1005|80
Chr7 exon 93696511 93698259 93696511 ID=MsG0780041668.01.T04:exon:22212;Parent=MsG0780041668.01.T04
Chr7 five_prime_UTR 93696068 93696273 93696068 ID=MsG0780041668.01.T04:five_prime_utr;Parent=MsG0780041668.01.T04
Chr7 five_prime_UTR 93696511 93698259 93696511 ID=MsG0780041668.01.T04:five_prime_utr;Parent=MsG0780041668.01.T04
Chr7 five_prime_UTR 93698673 93698727 93698673 ID=MsG0780041668.01.T04:five_prime_utr;Parent=MsG0780041668.01.T04
Chr7 CDS 93698728 93698919 93698728 ID=MsG0780041668.01.T04:cds;Parent=MsG0780041668.01.T04
Chr7 CDS 93699015 93699065 93699015 ID=MsG0780041668.01.T04:cds;Parent=MsG0780041668.01.T04
Chr7 three_prime_UTR 93699066 93699180 93699066 ID=MsG0780041668.01.T04:three_prime_utr;Parent=MsG0780041668.01.T04
Chr7 three_prime_UTR 93699298 93699400 93699298 ID=MsG0780041668.01.T04:three_prime_utr;Parent=MsG0780041668.01.T04
Chr7 three_prime_UTR 93699597 93699724 93699597 ID=MsG0780041668.01.T04:three_prime_utr;Parent=MsG0780041668.01.T04
Chr7 three_prime_UTR 93700362 93700578 93700362 ID=MsG0780041668.01.T04:three_prime_utr;Parent=MsG0780041668.01.T04
Chr7 three_prime_UTR 93700664 93701105 93700664 ID=MsG0780041668.01.T04:three_prime_utr;Parent=MsG0780041668.01.T04
Gene Sequence

>MsG0780041668.01.T04

ATGGATCATCAGCATCCATCAAACTGTAGCGACCCGAATGTCAAGTTCCTTTTAGCTGACTGGGAGAGATTACCTGGATTTGGCATTGGAGCTCAAATTGCTGGAATGTGTGGACTCTTGCTATTGCAATCAATGAAGGAAGAGTCCTTGTCACTAACTTCTACAATAGGGCTGATCATGATGGCTGCAAGGGGCTGTCCCGATCTAGCTGGAATTGCTACTTCTTTGCAGAAACTTCTGTAG

>MsG0780041668.01.T03

ATGGATCATCAGCATCCATCAAACTGTAGCGACCCGAATGTCAAGTTCCTTTTAGCTGACTGGGAGAGATTACCTGGATTTGGCATTGGAGCTCAAATTGCTGGAATGTGTGGACTCTTGCTATTGCAATCAATGAAGGAAGAGTCCTTGTCACTAACTTCTACAATAGGGCTGATCATGATGGCTGCAAGGGGCTGTCCCGATCTAGCTGGAATTGCTACTTCTTTGCAGAAACTTCTGTAG

>MsG0780041668.01.T02

ATGGATCATCAGCATCCATCAAACTGTAGCGACCCGAATGTCAAGTTCCTTTTAGCTGACTGGGAGAGATTACCTGGATTTGGCATTGGAGCTCAAATTGCTGGAATGTGTGGACTCTTGCTATTGCAATCAATGAAGGAAGAGTCCTTGTCACTAACTTCTACAATAGGGCTGATCATGATGGCTGCAAGGGGCTGTCCCGATCTAGCTGGAATTGCTACTTCTTTGCAGAAACTTCTGTAG

>MsG0780041668.01.T01

ATGGATCATCAGCATCCATCAAACTGTAGCGACCCGAATGTCAAGTTCCTTTTAGCTGACTGGGAGAGATTACCTGGATTTGGCATTGGAGCTCAAATTGCTGGAATGTGTGGACTCTTGCTATTGCAATCAATGAAGGAAGAGTCCTTGTCACTAACTTCTACAATAGGGCTGATCATGATGGCTGCAAGGGGCTGTCCCGATCTAGCTGGAATTGCTACTTCTTTGCAGAAACTTCTGTAG

Protein sequence

>MsG0780041668.01.T04

MDHQHPSNCSDPNVKFLLADWERLPGFGIGAQIAGMCGLLLLQSMKEESLSLTSTIGLIMMAARGCPDLAGIATSLQKLL*

>MsG0780041668.01.T03

MDHQHPSNCSDPNVKFLLADWERLPGFGIGAQIAGMCGLLLLQSMKEESLSLTSTIGLIMMAARGCPDLAGIATSLQKLL*

>MsG0780041668.01.T02

MDHQHPSNCSDPNVKFLLADWERLPGFGIGAQIAGMCGLLLLQSMKEESLSLTSTIGLIMMAARGCPDLAGIATSLQKLL*

>MsG0780041668.01.T01

MDHQHPSNCSDPNVKFLLADWERLPGFGIGAQIAGMCGLLLLQSMKEESLSLTSTIGLIMMAARGCPDLAGIATSLQKLL*