Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017320.01.T01 | XP_003603223.2 | 90.476 | 483 | 13 | 1 | 1 | 450 | 1 | 483 | 0 | 902 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017320.01.T01 | Q8VYG3 | 64.069 | 462 | 132 | 2 | 21 | 448 | 24 | 485 | 0 | 613 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017320.01.T01 | G7J933 | 90.476 | 483 | 13 | 1 | 1 | 450 | 1 | 483 | 0.0 | 902 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0380017320.01 | MsG0080048140.01 | PPI |
| MsG0180004835.01 | MsG0380017320.01 | PPI |
| MsG0380017320.01 | MsG0580029407.01 | PPI |
| MsG0380017320.01 | MsG0380017841.01 | PPI |
| MsG0380017320.01 | MsG0380015944.01 | PPI |
| MsG0380017320.01 | MsG0580024373.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017320.01.T01 | MTR_3g105230 | 90.476 | 483 | 13 | 1 | 1 | 450 | 1 | 483 | 0.0 | 902 |
| MsG0380017320.01.T01 | MTR_3g023740 | 82.402 | 483 | 52 | 1 | 1 | 450 | 1 | 483 | 0.0 | 811 |
| MsG0380017320.01.T01 | MTR_5g009970 | 44.053 | 454 | 218 | 5 | 29 | 446 | 40 | 493 | 1.48e-133 | 394 |
| MsG0380017320.01.T01 | MTR_5g010000 | 43.736 | 455 | 220 | 5 | 28 | 446 | 38 | 492 | 4.44e-129 | 383 |
| MsG0380017320.01.T01 | MTR_5g085730 | 40.882 | 499 | 245 | 8 | 1 | 449 | 1 | 499 | 3.21e-123 | 368 |
| MsG0380017320.01.T01 | MTR_8g099410 | 43.497 | 469 | 216 | 7 | 27 | 447 | 25 | 492 | 3.31e-123 | 368 |
| MsG0380017320.01.T01 | MTR_3g080190 | 42.380 | 479 | 227 | 7 | 21 | 450 | 31 | 509 | 5.09e-123 | 368 |
| MsG0380017320.01.T01 | MTR_8g099410 | 43.497 | 469 | 216 | 7 | 27 | 447 | 25 | 492 | 5.57e-122 | 369 |
| MsG0380017320.01.T01 | MTR_3g080810 | 42.733 | 461 | 214 | 9 | 30 | 444 | 35 | 491 | 6.97e-120 | 359 |
| MsG0380017320.01.T01 | MTR_5g093590 | 40.974 | 493 | 240 | 7 | 8 | 449 | 11 | 503 | 1.54e-118 | 356 |
| MsG0380017320.01.T01 | MTR_8g104820 | 40.909 | 462 | 223 | 9 | 30 | 444 | 30 | 488 | 1.80e-115 | 348 |
| MsG0380017320.01.T01 | MTR_3g117500 | 40.998 | 461 | 224 | 7 | 30 | 444 | 24 | 482 | 9.33e-114 | 343 |
| MsG0380017320.01.T01 | MTR_5g009970 | 42.271 | 414 | 203 | 5 | 69 | 446 | 6 | 419 | 4.44e-112 | 337 |
| MsG0380017320.01.T01 | MTR_4g074960 | 41.151 | 469 | 226 | 8 | 29 | 448 | 27 | 494 | 5.05e-111 | 340 |
| MsG0380017320.01.T01 | MTR_3g010330 | 40.517 | 464 | 233 | 6 | 25 | 447 | 20 | 481 | 7.55e-111 | 335 |
| MsG0380017320.01.T01 | MTR_4g035955 | 40.700 | 457 | 225 | 7 | 29 | 444 | 13 | 464 | 4.47e-109 | 330 |
| MsG0380017320.01.T01 | MTR_4g035975 | 40.552 | 471 | 222 | 12 | 30 | 448 | 27 | 491 | 1.11e-108 | 330 |
| MsG0380017320.01.T01 | MTR_4g035930 | 40.175 | 458 | 226 | 7 | 29 | 444 | 14 | 465 | 1.11e-107 | 327 |
| MsG0380017320.01.T01 | MTR_1g037340 | 41.957 | 460 | 223 | 9 | 30 | 447 | 25 | 482 | 1.04e-103 | 317 |
| MsG0380017320.01.T01 | MTR_5g009970 | 40.561 | 392 | 197 | 5 | 91 | 446 | 1 | 392 | 6.90e-100 | 305 |
| MsG0380017320.01.T01 | MTR_1g088190 | 38.013 | 463 | 220 | 10 | 30 | 447 | 39 | 479 | 1.33e-99 | 306 |
| MsG0380017320.01.T01 | MTR_3g113720 | 38.248 | 468 | 234 | 8 | 31 | 448 | 58 | 520 | 8.06e-99 | 306 |
| MsG0380017320.01.T01 | MTR_5g009970 | 46.416 | 293 | 154 | 3 | 157 | 446 | 32 | 324 | 2.62e-91 | 280 |
| MsG0380017320.01.T01 | MTR_8g075990 | 35.684 | 468 | 246 | 9 | 31 | 448 | 64 | 526 | 6.20e-83 | 265 |
| MsG0380017320.01.T01 | MTR_2g028480 | 36.626 | 486 | 234 | 12 | 30 | 447 | 111 | 590 | 6.65e-80 | 259 |
| MsG0380017320.01.T01 | MTR_3g090540 | 32.371 | 485 | 254 | 11 | 29 | 446 | 106 | 583 | 4.12e-71 | 236 |
| MsG0380017320.01.T01 | MTR_3g082440 | 34.426 | 488 | 241 | 16 | 30 | 448 | 116 | 593 | 1.14e-67 | 227 |
| MsG0380017320.01.T01 | MTR_1g088190 | 35.197 | 304 | 132 | 8 | 30 | 289 | 39 | 321 | 8.10e-51 | 176 |
| MsG0380017320.01.T01 | MTR_1g111340 | 53.939 | 165 | 42 | 2 | 214 | 378 | 1 | 131 | 3.98e-50 | 167 |
| MsG0380017320.01.T01 | MTR_7g108925 | 43.137 | 153 | 85 | 2 | 296 | 447 | 48 | 199 | 1.32e-35 | 131 |
| MsG0380017320.01.T01 | MTR_0393s0050 | 43.077 | 130 | 73 | 1 | 297 | 425 | 26 | 155 | 2.98e-27 | 107 |
| MsG0380017320.01.T01 | MTR_4g128810 | 25.424 | 413 | 210 | 15 | 43 | 448 | 14 | 335 | 3.04e-27 | 112 |
| MsG0380017320.01.T01 | MTR_1g037320 | 41.803 | 122 | 69 | 2 | 324 | 444 | 169 | 289 | 1.53e-23 | 100 |
| MsG0380017320.01.T01 | MTR_1g037320 | 39.623 | 159 | 60 | 3 | 91 | 213 | 1 | 159 | 8.00e-16 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017320.01.T01 | AT3G43860 | 64.069 | 462 | 132 | 2 | 21 | 448 | 24 | 485 | 0.0 | 613 |
| MsG0380017320.01.T01 | AT3G43860 | 64.069 | 462 | 132 | 2 | 21 | 448 | 24 | 485 | 0.0 | 613 |
| MsG0380017320.01.T01 | AT4G09740 | 44.201 | 457 | 216 | 6 | 29 | 448 | 22 | 476 | 1.11e-128 | 381 |
| MsG0380017320.01.T01 | AT4G23560 | 43.956 | 455 | 216 | 7 | 31 | 448 | 24 | 476 | 3.01e-128 | 380 |
| MsG0380017320.01.T01 | AT4G11050 | 44.325 | 467 | 211 | 7 | 30 | 448 | 26 | 491 | 9.14e-127 | 378 |
| MsG0380017320.01.T01 | AT4G11050 | 44.325 | 467 | 211 | 7 | 30 | 448 | 26 | 491 | 4.22e-126 | 379 |
| MsG0380017320.01.T01 | AT4G11050 | 44.325 | 467 | 211 | 7 | 30 | 448 | 26 | 491 | 4.94e-126 | 379 |
| MsG0380017320.01.T01 | AT1G64390 | 43.683 | 467 | 214 | 7 | 30 | 448 | 25 | 490 | 3.52e-123 | 372 |
| MsG0380017320.01.T01 | AT4G02290 | 42.857 | 462 | 217 | 7 | 30 | 447 | 52 | 510 | 3.62e-119 | 358 |
| MsG0380017320.01.T01 | AT1G70710 | 40.974 | 493 | 240 | 10 | 1 | 448 | 1 | 487 | 5.41e-119 | 357 |
| MsG0380017320.01.T01 | AT2G32990 | 41.429 | 490 | 233 | 8 | 10 | 445 | 14 | 503 | 1.48e-118 | 357 |
| MsG0380017320.01.T01 | AT1G23210 | 40.825 | 485 | 235 | 10 | 9 | 448 | 10 | 487 | 5.19e-116 | 349 |
| MsG0380017320.01.T01 | AT1G02800 | 42.857 | 462 | 215 | 8 | 30 | 447 | 43 | 499 | 8.42e-115 | 346 |
| MsG0380017320.01.T01 | AT1G71380 | 39.958 | 478 | 241 | 8 | 14 | 448 | 6 | 480 | 4.12e-109 | 331 |
| MsG0380017320.01.T01 | AT2G44550 | 39.876 | 484 | 245 | 8 | 3 | 444 | 8 | 487 | 1.07e-108 | 330 |
| MsG0380017320.01.T01 | AT1G22880 | 40.652 | 460 | 229 | 7 | 30 | 448 | 24 | 480 | 1.03e-107 | 327 |
| MsG0380017320.01.T01 | AT4G39010 | 39.195 | 472 | 238 | 9 | 24 | 448 | 23 | 492 | 9.28e-105 | 320 |
| MsG0380017320.01.T01 | AT2G44540 | 39.583 | 480 | 240 | 9 | 10 | 446 | 18 | 490 | 2.41e-104 | 319 |
| MsG0380017320.01.T01 | AT2G44560 | 39.184 | 490 | 251 | 8 | 1 | 447 | 6 | 491 | 6.48e-102 | 313 |
| MsG0380017320.01.T01 | AT1G48930 | 40.430 | 465 | 228 | 7 | 29 | 445 | 29 | 492 | 1.08e-101 | 317 |
| MsG0380017320.01.T01 | AT2G44570 | 39.501 | 481 | 242 | 10 | 11 | 447 | 17 | 492 | 2.33e-100 | 309 |
| MsG0380017320.01.T01 | AT1G19940 | 38.210 | 458 | 232 | 9 | 30 | 441 | 48 | 500 | 2.60e-98 | 304 |
| MsG0380017320.01.T01 | AT1G19940 | 38.210 | 458 | 232 | 9 | 30 | 441 | 48 | 500 | 2.60e-98 | 304 |
| MsG0380017320.01.T01 | AT4G39000 | 36.266 | 466 | 248 | 8 | 30 | 448 | 25 | 488 | 3.04e-96 | 298 |
| MsG0380017320.01.T01 | AT1G75680 | 37.885 | 454 | 229 | 10 | 31 | 437 | 58 | 505 | 4.92e-95 | 296 |
| MsG0380017320.01.T01 | AT4G38990 | 35.700 | 493 | 258 | 11 | 4 | 444 | 2 | 487 | 5.58e-93 | 290 |
| MsG0380017320.01.T01 | AT4G02290 | 39.401 | 401 | 196 | 7 | 91 | 447 | 1 | 398 | 3.32e-86 | 270 |
| MsG0380017320.01.T01 | AT1G22880 | 37.845 | 399 | 204 | 7 | 91 | 448 | 1 | 396 | 6.47e-81 | 256 |
| MsG0380017320.01.T01 | AT5G49720 | 35.934 | 487 | 236 | 13 | 30 | 447 | 108 | 587 | 1.93e-76 | 250 |
| MsG0380017320.01.T01 | AT4G39010 | 36.685 | 368 | 186 | 7 | 24 | 345 | 23 | 389 | 4.96e-76 | 243 |
| MsG0380017320.01.T01 | AT4G24260 | 34.497 | 487 | 243 | 14 | 30 | 447 | 108 | 587 | 1.69e-71 | 237 |
| MsG0380017320.01.T01 | AT2G44570 | 37.931 | 377 | 186 | 9 | 11 | 344 | 17 | 388 | 4.98e-67 | 220 |
| MsG0380017320.01.T01 | AT1G65610 | 33.607 | 488 | 248 | 16 | 30 | 450 | 116 | 594 | 1.54e-65 | 221 |
| MsG0380017320.01.T01 | AT1G19940 | 35.457 | 361 | 186 | 7 | 30 | 344 | 48 | 407 | 5.54e-65 | 215 |
| MsG0380017320.01.T01 | AT1G22880 | 41.924 | 291 | 127 | 5 | 30 | 280 | 24 | 312 | 9.18e-60 | 199 |
| MsG0380017320.01.T01 | AT4G38990 | 34.234 | 333 | 161 | 6 | 30 | 323 | 23 | 336 | 2.69e-52 | 179 |
| MsG0380017320.01.T01 | AT4G24260 | 31.250 | 384 | 192 | 12 | 30 | 344 | 108 | 488 | 4.41e-41 | 153 |
| MsG0380017320.01.T01 | AT4G24260 | 32.484 | 314 | 145 | 9 | 30 | 277 | 108 | 420 | 6.99e-38 | 144 |
| MsG0380017320.01.T01 | AT3G42153 | 40.426 | 94 | 51 | 3 | 203 | 291 | 16 | 109 | 2.56e-14 | 69.7 |
Find 126 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAATAAATAAAGGATTTA+AGG | 0.150196 | 3:-94896918 | MsG0380017320.01.T01:five_prime_UTR |
| TCTAGCAAAGCTTGCTTCTT+TGG | 0.183970 | 3:-94894344 | MsG0380017320.01.T01:CDS |
| CTCCAAGGAACCCTGTTATT+TGG | 0.186545 | 3:+94896533 | None:intergenic |
| ACCATGTATGATCTTCCTTC+TGG | 0.191808 | 3:+94894616 | None:intergenic |
| CCTTTCTATTGCTCCTATTC+AGG | 0.238466 | 3:-94895632 | MsG0380017320.01.T01:CDS |
| AGAATAGTAATGTGTAAATT+AGG | 0.256976 | 3:-94896970 | MsG0380017320.01.T01:five_prime_UTR |
| TAACAGATGGATTACATATT+GGG | 0.264521 | 3:-94894646 | MsG0380017320.01.T01:intron |
| TACCAGGAGACAAATGTATT+TGG | 0.265919 | 3:+94895236 | None:intergenic |
| TGGTAACAAATTCTTTGATT+TGG | 0.273362 | 3:+94896790 | None:intergenic |
| TTTGTGGGTCAATGTTTATT+TGG | 0.274650 | 3:-94894119 | MsG0380017320.01.T01:three_prime_UTR |
| TGGATTCTAAAAGAGTATAT+TGG | 0.281538 | 3:-94896685 | MsG0380017320.01.T01:CDS |
| CTAGCAAAGCTTGCTTCTTT+GGG | 0.282416 | 3:-94894343 | MsG0380017320.01.T01:CDS |
| GCAGGAGATAATGTGAAATA+TGG | 0.286093 | 3:-94896216 | MsG0380017320.01.T01:CDS |
| TGCCTTGTTGAGTAAATTAA+TGG | 0.298149 | 3:-94894065 | MsG0380017320.01.T01:three_prime_UTR |
| GGTAACAAATTCTTTGATTT+GGG | 0.305972 | 3:+94896791 | None:intergenic |
| TTAACAGATGGATTACATAT+TGG | 0.314396 | 3:-94894647 | MsG0380017320.01.T01:intron |
| AAAATCCCTTATATTCTTAG+AGG | 0.322178 | 3:-94896579 | MsG0380017320.01.T01:CDS |
| CCATGTATGATCTTCCTTCT+GGG | 0.323883 | 3:+94894617 | None:intergenic |
| TCTCCTCAACAAAGCAAAAT+TGG | 0.327119 | 3:-94895854 | MsG0380017320.01.T01:intron |
| CCAGTTAGCTCATGTGGATT+TGG | 0.335953 | 3:+94894472 | None:intergenic |
| GAAAACTCCCTCCAAATAAC+AGG | 0.336359 | 3:-94896544 | MsG0380017320.01.T01:CDS |
| AATACTAGTACTAATTTGTC+TGG | 0.339130 | 3:+94894188 | None:intergenic |
| TTTGTGCCTCTAAGAATATA+AGG | 0.344488 | 3:+94896573 | None:intergenic |
| TCTATTCACAAAATAAATAA+AGG | 0.360584 | 3:-94896926 | MsG0380017320.01.T01:five_prime_UTR |
| ATTTGAAGCAACAAAGGAAA+TGG | 0.364952 | 3:-94896133 | MsG0380017320.01.T01:CDS |
| CCAAATCCACATGAGCTAAC+TGG | 0.370400 | 3:-94894472 | MsG0380017320.01.T01:CDS |
| ATAGTAGGAGGTCAAATATA+TGG | 0.375746 | 3:-94894157 | MsG0380017320.01.T01:three_prime_UTR |
| TCGAAATGGCTGCAAAGAAA+TGG | 0.380962 | 3:-94894496 | MsG0380017320.01.T01:CDS |
| TGAATGTAGGTCGACCTATC+TGG | 0.385511 | 3:-94896252 | MsG0380017320.01.T01:intron |
| GATTTGGCAAAATCACATAA+AGG | 0.392643 | 3:-94895674 | MsG0380017320.01.T01:CDS |
| AGATCATACATGGTAGGATT+CGG | 0.394514 | 3:-94894607 | MsG0380017320.01.T01:CDS |
| GGATTCTAAAAGAGTATATT+GGG | 0.397703 | 3:-94896684 | MsG0380017320.01.T01:CDS |
| ATTTGGTGGTAAGGACTATC+AGG | 0.398032 | 3:+94895253 | None:intergenic |
| AAATTCTTTGATTTGGGTGT+TGG | 0.403419 | 3:+94896797 | None:intergenic |
| GATCATACATGGTAGGATTC+GGG | 0.419888 | 3:-94894606 | MsG0380017320.01.T01:CDS |
| TCGAATTTGTCATTTATGTC+AGG | 0.420508 | 3:+94894433 | None:intergenic |
| TCTATTTACGACCTTTAGTA+AGG | 0.423163 | 3:+94894252 | None:intergenic |
| TATTCAAGATGCAATCAAAT+GGG | 0.427350 | 3:-94896106 | MsG0380017320.01.T01:CDS |
| TATGTGCAAGGTTCAGTCTT+AGG | 0.428923 | 3:+94894391 | None:intergenic |
| CTCCAAATAACAGGGTTCCT+TGG | 0.434846 | 3:-94896535 | MsG0380017320.01.T01:CDS |
| TAGTTAAAAGATTGTTGAAA+GGG | 0.437797 | 3:-94894279 | MsG0380017320.01.T01:three_prime_UTR |
| AATATATGTAATGTAAAGAT+TGG | 0.440270 | 3:+94896770 | None:intergenic |
| GAGCTAACTGGAGCCATTGT+AGG | 0.443297 | 3:-94894460 | MsG0380017320.01.T01:CDS |
| GACAAATGTATTTGGTGGTA+AGG | 0.445589 | 3:+94895244 | None:intergenic |
| GTAAATTAGGTTCCAAATGA+AGG | 0.446785 | 3:-94896957 | MsG0380017320.01.T01:five_prime_UTR |
| TTGTGCCTCTAAGAATATAA+GGG | 0.447754 | 3:+94896574 | None:intergenic |
| GGACAATTGATATCTTCGTT+TGG | 0.451331 | 3:+94894529 | None:intergenic |
| TTCTGAAACGGCTGCTGCTA+TGG | 0.452071 | 3:-94895926 | MsG0380017320.01.T01:CDS |
| ACATACGTTATAGCCTGAAT+AGG | 0.452957 | 3:+94895619 | None:intergenic |
| AGGAAGCATGATACTTGTCC+AGG | 0.461040 | 3:-94896630 | MsG0380017320.01.T01:CDS |
| TCTTCGTTTGGTGACAACTT+TGG | 0.462848 | 3:+94894541 | None:intergenic |
| TCACATAAAGGAACATATGA+TGG | 0.468381 | 3:-94895662 | MsG0380017320.01.T01:CDS |
| TTCTTAGAGGCACAAAGATC+AGG | 0.468999 | 3:-94896566 | MsG0380017320.01.T01:CDS |
| TAGTATTTATATAGTATAGT+AGG | 0.469162 | 3:-94894172 | MsG0380017320.01.T01:three_prime_UTR |
| ATATTCAAGATGCAATCAAA+TGG | 0.469316 | 3:-94896107 | MsG0380017320.01.T01:CDS |
| TGTAAGATGAAGCTCTCAAA+TGG | 0.472679 | 3:+94896736 | None:intergenic |
| GAGGATGGAATCAAATGAAA+AGG | 0.476345 | 3:+94896862 | None:intergenic |
| GGACAAGTATCATGCTTCCT+TGG | 0.482582 | 3:+94896633 | None:intergenic |
| TTTGAGAGCTTCATCTTACA+AGG | 0.483035 | 3:-94896733 | MsG0380017320.01.T01:five_prime_UTR |
| TCACTGTGACTACATTATCA+TGG | 0.484072 | 3:-94896179 | MsG0380017320.01.T01:CDS |
| TTTGAAGCAACAAAGGAAAT+GGG | 0.485003 | 3:-94896132 | MsG0380017320.01.T01:CDS |
| GGAGACTCGGCTGTCGATGA+TGG | 0.496558 | 3:-94896509 | MsG0380017320.01.T01:CDS |
| TATGTTAATTCTCTTGCAGC+TGG | 0.501079 | 3:-94894370 | MsG0380017320.01.T01:CDS |
| CACCAAATACATTTGTCTCC+TGG | 0.502545 | 3:-94895238 | MsG0380017320.01.T01:intron |
| GCCTTGTTGAGTAAATTAAT+GGG | 0.502655 | 3:-94894064 | MsG0380017320.01.T01:three_prime_UTR |
| CAGGAGATAATGTGAAATAT+GGG | 0.502944 | 3:-94896215 | MsG0380017320.01.T01:CDS |
| CCTGAATAGGAGCAATAGAA+AGG | 0.507839 | 3:+94895632 | None:intergenic |
| AAGCTAAGAGATGGTTGTAA+AGG | 0.509748 | 3:+94896888 | None:intergenic |
| CAAGGAACCCTGTTATTTGG+AGG | 0.510003 | 3:+94896536 | None:intergenic |
| ATTAGGTTCCAAATGAAGGT+TGG | 0.513026 | 3:-94896953 | MsG0380017320.01.T01:five_prime_UTR |
| GGGTCAATTTAATTATAAAG+AGG | 0.516477 | 3:-94896609 | MsG0380017320.01.T01:CDS |
| CATCATAATATCCTCCAGAT+AGG | 0.517630 | 3:+94896238 | None:intergenic |
| CTTTATAATTAAATTGACCC+TGG | 0.518556 | 3:+94896612 | None:intergenic |
| CAGCCATTTCGAAAAGCTCG+TGG | 0.520074 | 3:+94894507 | None:intergenic |
| CTATGATGAGCTTGTGTGGG+TGG | 0.520571 | 3:+94894577 | None:intergenic |
| TCTGGAGGATATTATGATGC+AGG | 0.520913 | 3:-94896234 | MsG0380017320.01.T01:CDS |
| ACCTCTATGATGAGCTTGTG+TGG | 0.521792 | 3:+94894573 | None:intergenic |
| TAGTGAGATTGCTTCTGAAA+CGG | 0.528733 | 3:-94895938 | MsG0380017320.01.T01:CDS |
| GGCAGCAACTTGGCTATACA+TGG | 0.532961 | 3:-94895461 | MsG0380017320.01.T01:CDS |
| CATGTAGGATGAATTGTTGT+GGG | 0.533902 | 3:-94895482 | MsG0380017320.01.T01:intron |
| CCCAGAAGGAAGATCATACA+TGG | 0.534406 | 3:-94894617 | MsG0380017320.01.T01:CDS |
| CAGGAGACAAATGTATTTGG+TGG | 0.535513 | 3:+94895239 | None:intergenic |
| GGATTTATTCATATGAGAGA+TGG | 0.536941 | 3:-94895124 | MsG0380017320.01.T01:CDS |
| AATTGTTGTGGGCAGCAACT+TGG | 0.538695 | 3:-94895471 | MsG0380017320.01.T01:CDS |
| CACTGTGACTACATTATCAT+GGG | 0.541514 | 3:-94896178 | MsG0380017320.01.T01:CDS |
| CTAATGTAGCAGAATTCAGT+TGG | 0.545904 | 3:-94895387 | MsG0380017320.01.T01:CDS |
| CTGAATAGGAGCAATAGAAA+GGG | 0.546087 | 3:+94895633 | None:intergenic |
| ATAGTTAAAAGATTGTTGAA+AGG | 0.546151 | 3:-94894280 | MsG0380017320.01.T01:three_prime_UTR |
| CTTGAAACATTTAAAGCACA+TGG | 0.547835 | 3:-94895301 | MsG0380017320.01.T01:CDS |
| ATGGCTCCAGTTAGCTCATG+TGG | 0.553897 | 3:+94894466 | None:intergenic |
| GCATGGCTTACTTTGTTCCA+AGG | 0.555429 | 3:-94896650 | MsG0380017320.01.T01:CDS |
| GCCGGTAGCATATTGTGTAT+TGG | 0.563729 | 3:+94895099 | None:intergenic |
| AGTTGGGATCTTAAATACGC+TGG | 0.564006 | 3:-94895370 | MsG0380017320.01.T01:CDS |
| CCTCTATGATGAGCTTGTGT+GGG | 0.566191 | 3:+94894574 | None:intergenic |
| AACAGAATTTGAAGCAACAA+AGG | 0.567677 | 3:-94896139 | MsG0380017320.01.T01:CDS |
| GCCAATACACAATATGCTAC+CGG | 0.569100 | 3:-94895100 | MsG0380017320.01.T01:CDS |
| ACCCATTAATTTACTCAACA+AGG | 0.572044 | 3:+94894063 | None:intergenic |
| AAGGAACCCTGTTATTTGGA+GGG | 0.579113 | 3:+94896537 | None:intergenic |
| CCCACACAAGCTCATCATAG+AGG | 0.580704 | 3:-94894574 | MsG0380017320.01.T01:CDS |
| AGTTAAAAGATTGTTGAAAG+GGG | 0.583773 | 3:-94894278 | MsG0380017320.01.T01:three_prime_UTR |
| GTAGTCACAGTGAATGCCAT+TGG | 0.585430 | 3:+94896189 | None:intergenic |
| ATACTAGTACTAATTTGTCT+GGG | 0.585687 | 3:+94894189 | None:intergenic |
| AAAAGGAACAAGCTAAGAGA+TGG | 0.587234 | 3:+94896879 | None:intergenic |
| AACAGATGGATTACATATTG+GGG | 0.589442 | 3:-94894645 | MsG0380017320.01.T01:intron |
| GAAAGGGGAGACCTTACTAA+AGG | 0.590439 | 3:-94894263 | MsG0380017320.01.T01:three_prime_UTR |
| TAATGTAGCAGAATTCAGTT+GGG | 0.592531 | 3:-94895386 | MsG0380017320.01.T01:CDS |
| GAAGAAACAAATATATGTTG+AGG | 0.593384 | 3:-94896053 | MsG0380017320.01.T01:intron |
| ATTGGGCAATCATTGTAGCA+TGG | 0.598810 | 3:-94896667 | MsG0380017320.01.T01:CDS |
| CTAACTGGAGCCATTGTAGG+TGG | 0.599511 | 3:-94894457 | MsG0380017320.01.T01:CDS |
| GAAGGAAGATCATACATGGT+AGG | 0.609021 | 3:-94894613 | MsG0380017320.01.T01:CDS |
| AGTGAACAAGAAAGATGTGC+CGG | 0.615391 | 3:+94895081 | None:intergenic |
| TATGTCAGGTCCACCTACAA+TGG | 0.616354 | 3:+94894447 | None:intergenic |
| GGTTCCTTGGAGAGGAGACT+CGG | 0.618882 | 3:-94896522 | MsG0380017320.01.T01:CDS |
| GAGATGGTTGTAAAGGCAAG+AGG | 0.623415 | 3:+94896895 | None:intergenic |
| TGTGAAATATGGGTTACCAA+TGG | 0.626157 | 3:-94896205 | MsG0380017320.01.T01:CDS |
| TCATGTAGGATGAATTGTTG+TGG | 0.627857 | 3:-94895483 | MsG0380017320.01.T01:intron |
| TATTTATATAGTATAGTAGG+AGG | 0.628461 | 3:-94894169 | MsG0380017320.01.T01:three_prime_UTR |
| AGAGAATTAACATATGTGCA+AGG | 0.635433 | 3:+94894379 | None:intergenic |
| ACAGCCGAGTCTCCTCTCCA+AGG | 0.637628 | 3:+94896518 | None:intergenic |
| AATAACAGGGTTCCTTGGAG+AGG | 0.653619 | 3:-94896530 | MsG0380017320.01.T01:CDS |
| AGCCATTTCGAAAAGCTCGT+GGG | 0.656326 | 3:+94894508 | None:intergenic |
| ATTCAAGATGCAATCAAATG+GGG | 0.657597 | 3:-94896105 | MsG0380017320.01.T01:CDS |
| GGAAGCATGATACTTGTCCA+GGG | 0.658370 | 3:-94896629 | MsG0380017320.01.T01:CDS |
| GGTGGTAAGGACTATCAGGA+AGG | 0.672514 | 3:+94895257 | None:intergenic |
| ATGTAGGTCGACCTATCTGG+AGG | 0.697352 | 3:-94896249 | MsG0380017320.01.T01:intron |
| AAAACTCCCTCCAAATAACA+GGG | 0.697948 | 3:-94896543 | MsG0380017320.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACATTAAATGAATAATTT+GGG | - | Chr3:94894735-94894754 | MsG0380017320.01.T01:intron | 10.0% |
| !! | CTAAATTTAATTAAAAAAAC+TGG | + | Chr3:94896215-94896234 | None:intergenic | 10.0% |
| !! | TATATATATATATATTTACC+AGG | + | Chr3:94895817-94895836 | None:intergenic | 10.0% |
| !!! | TTTAACTTTTTGTTTATATT+TGG | + | Chr3:94895998-94896017 | None:intergenic | 10.0% |
| !!! | TTTTATATTATCAAACAAAT+TGG | - | Chr3:94896106-94896125 | MsG0380017320.01.T01:CDS | 10.0% |
| !! | AATAATTGATTGTATATCTT+TGG | - | Chr3:94895526-94895545 | MsG0380017320.01.T01:intron | 15.0% |
| !! | AATATATGTAATGTAAAGAT+TGG | + | Chr3:94894267-94894286 | None:intergenic | 15.0% |
| !! | CAAAATAAATAAAGGATTTA+AGG | - | Chr3:94894116-94894135 | MsG0380017320.01.T01:three_prime_UTR | 15.0% |
| !! | GATACATTAAATGAATAATT+TGG | - | Chr3:94894734-94894753 | MsG0380017320.01.T01:intron | 15.0% |
| !! | TAGTATTTATATAGTATAGT+AGG | - | Chr3:94896862-94896881 | MsG0380017320.01.T01:five_prime_UTR | 15.0% |
| !! | TATAAACAAAAAGTTAAATG+TGG | - | Chr3:94896000-94896019 | MsG0380017320.01.T01:intron | 15.0% |
| !! | TCTATTCACAAAATAAATAA+AGG | - | Chr3:94894108-94894127 | MsG0380017320.01.T01:three_prime_UTR | 15.0% |
| !!! | AATTTTATTGAATTGAATGT+AGG | - | Chr3:94894769-94894788 | MsG0380017320.01.T01:intron | 15.0% |
| !! | AATTAATATGTGAGCATAAA+TGG | + | Chr3:94896088-94896107 | None:intergenic | 20.0% |
| !! | AGAATAGTAATGTGTAAATT+AGG | - | Chr3:94894064-94894083 | MsG0380017320.01.T01:three_prime_UTR | 20.0% |
| !! | ATAGTTAAAAGATTGTTGAA+AGG | - | Chr3:94896754-94896773 | MsG0380017320.01.T01:five_prime_UTR | 20.0% |
| !! | ATTATATATGATGATTATGC+AGG | - | Chr3:94895886-94895905 | MsG0380017320.01.T01:CDS | 20.0% |
| !! | CATGATTAAAATATGTTAGA+CGG | + | Chr3:94894711-94894730 | None:intergenic | 20.0% |
| !! | TAGTTAAAAGATTGTTGAAA+GGG | - | Chr3:94896755-94896774 | MsG0380017320.01.T01:five_prime_UTR | 20.0% |
| !! | TATATTATCAAACAAATTGG+AGG | - | Chr3:94896109-94896128 | MsG0380017320.01.T01:CDS | 20.0% |
| !! | TATTTATATAGTATAGTAGG+AGG | - | Chr3:94896865-94896884 | MsG0380017320.01.T01:five_prime_UTR | 20.0% |
| !! | TTATCAAAGCTTAGTAAATA+AGG | + | Chr3:94895464-94895483 | None:intergenic | 20.0% |
| !!! | AACAATCTTTTAACTATGTT+GGG | + | Chr3:94896751-94896770 | None:intergenic | 20.0% |
| !!! | AGTATACACTATATCAATTT+TGG | + | Chr3:94896315-94896334 | None:intergenic | 20.0% |
| ! | AAAATCCCTTATATTCTTAG+AGG | - | Chr3:94894455-94894474 | MsG0380017320.01.T01:CDS | 25.0% |
| ! | AAACAAATATATGTTGAGGT+AGG | - | Chr3:94894985-94895004 | MsG0380017320.01.T01:CDS | 25.0% |
| ! | AACAAATATATGTTGAGGTA+GGG | - | Chr3:94894986-94895005 | MsG0380017320.01.T01:CDS | 25.0% |
| ! | AGTTAAAAGATTGTTGAAAG+GGG | - | Chr3:94896756-94896775 | MsG0380017320.01.T01:five_prime_UTR | 25.0% |
| ! | ATATGAGACTGAATTAATGT+TGG | - | Chr3:94895492-94895511 | MsG0380017320.01.T01:intron | 25.0% |
| ! | ATATTCAAGATGCAATCAAA+TGG | - | Chr3:94894927-94894946 | MsG0380017320.01.T01:intron | 25.0% |
| ! | ATCAGTATGTCTAAAAACAA+TGG | + | Chr3:94895143-94895162 | None:intergenic | 25.0% |
| ! | CTGGATTTAAATATAAGCAA+AGG | + | Chr3:94895223-94895242 | None:intergenic | 25.0% |
| ! | CTTTATAATTAAATTGACCC+TGG | + | Chr3:94894425-94894444 | None:intergenic | 25.0% |
| ! | GAAGAAACAAATATATGTTG+AGG | - | Chr3:94894981-94895000 | MsG0380017320.01.T01:intron | 25.0% |
| ! | GGGTCAATTTAATTATAAAG+AGG | - | Chr3:94894425-94894444 | MsG0380017320.01.T01:CDS | 25.0% |
| ! | TAGACGGAAAATAATGAATT+TGG | + | Chr3:94894695-94894714 | None:intergenic | 25.0% |
| ! | TATGAGACTGAATTAATGTT+GGG | - | Chr3:94895493-94895512 | MsG0380017320.01.T01:intron | 25.0% |
| ! | TATTCAAGATGCAATCAAAT+GGG | - | Chr3:94894928-94894947 | MsG0380017320.01.T01:intron | 25.0% |
| ! | TGAAAATAGCCAATAGTATT+TGG | - | Chr3:94895282-94895301 | MsG0380017320.01.T01:CDS | 25.0% |
| ! | TGGTAACAAATTCTTTGATT+TGG | + | Chr3:94894247-94894266 | None:intergenic | 25.0% |
| !! | AATACTAGTACTAATTTGTC+TGG | + | Chr3:94896849-94896868 | None:intergenic | 25.0% |
| !! | ATACTAGTACTAATTTGTCT+GGG | + | Chr3:94896848-94896867 | None:intergenic | 25.0% |
| !! | ATCTAAAGTCTTTATTACTG+CGG | - | Chr3:94896262-94896281 | MsG0380017320.01.T01:intron | 25.0% |
| !! | ATGAATTTGGTCATCAATTT+TGG | + | Chr3:94894682-94894701 | None:intergenic | 25.0% |
| !! | GGATTCTAAAAGAGTATATT+GGG | - | Chr3:94894350-94894369 | MsG0380017320.01.T01:CDS | 25.0% |
| !! | GGTAACAAATTCTTTGATTT+GGG | + | Chr3:94894246-94894265 | None:intergenic | 25.0% |
| !! | TGGATTCTAAAAGAGTATAT+TGG | - | Chr3:94894349-94894368 | MsG0380017320.01.T01:CDS | 25.0% |
| !! | TTTTATTAGCGTAATTCTCA+TGG | - | Chr3:94894329-94894348 | MsG0380017320.01.T01:exon | 25.0% |
| !!! | ACAATCTTTTAACTATGTTG+GGG | + | Chr3:94896750-94896769 | None:intergenic | 25.0% |
| !!! | CAACAATCTTTTAACTATGT+TGG | + | Chr3:94896752-94896771 | None:intergenic | 25.0% |
| !!! | TAACAGATGGATTACATATT+GGG | - | Chr3:94896388-94896407 | MsG0380017320.01.T01:intron | 25.0% |
| !!! | TCTTTTGTCTTCATTTTTTC+TGG | + | Chr3:94895044-94895063 | None:intergenic | 25.0% |
| !!! | TTAACAGATGGATTACATAT+TGG | - | Chr3:94896387-94896406 | MsG0380017320.01.T01:intron | 25.0% |
| AACAATGATGATCATCAACT+GGG | + | Chr3:94895013-94895032 | None:intergenic | 30.0% | |
| ACCCATTAATTTACTCAACA+AGG | + | Chr3:94896974-94896993 | None:intergenic | 30.0% | |
| AGAGAATTAACATATGTGCA+AGG | + | Chr3:94896658-94896677 | None:intergenic | 30.0% | |
| ATAGCGTGAACATATAATGT+TGG | - | Chr3:94896360-94896379 | MsG0380017320.01.T01:intron | 30.0% | |
| ATAGTAGGAGGTCAAATATA+TGG | - | Chr3:94896877-94896896 | MsG0380017320.01.T01:five_prime_UTR | 30.0% | |
| ATATATGATGATTATGCAGG+TGG | - | Chr3:94895889-94895908 | MsG0380017320.01.T01:CDS | 30.0% | |
| ATTCAAGATGCAATCAAATG+GGG | - | Chr3:94894929-94894948 | MsG0380017320.01.T01:intron | 30.0% | |
| CAGGAGATAATGTGAAATAT+GGG | - | Chr3:94894819-94894838 | MsG0380017320.01.T01:intron | 30.0% | |
| CATGTAACAAATACTTCAAC+TGG | + | Chr3:94895242-94895261 | None:intergenic | 30.0% | |
| CCAATAGTATTTGGTTACAT+GGG | - | Chr3:94895291-94895310 | MsG0380017320.01.T01:CDS | 30.0% | |
| GATTTGGCAAAATCACATAA+AGG | - | Chr3:94895360-94895379 | MsG0380017320.01.T01:CDS | 30.0% | |
| GGATTTATTCATATGAGAGA+TGG | - | Chr3:94895910-94895929 | MsG0380017320.01.T01:CDS | 30.0% | |
| GTAAATTAGGTTCCAAATGA+AGG | - | Chr3:94894077-94894096 | MsG0380017320.01.T01:three_prime_UTR | 30.0% | |
| TAATGTAGCAGAATTCAGTT+GGG | - | Chr3:94895648-94895667 | MsG0380017320.01.T01:CDS | 30.0% | |
| TCAACAAAGCAAAATTGGTA+TGG | - | Chr3:94895185-94895204 | MsG0380017320.01.T01:intron | 30.0% | |
| TCACATAAAGGAACATATGA+TGG | - | Chr3:94895372-94895391 | MsG0380017320.01.T01:CDS | 30.0% | |
| TCTATTTACGACCTTTAGTA+AGG | + | Chr3:94896785-94896804 | None:intergenic | 30.0% | |
| TTGGAATTTCTGACATTTAG+AGG | + | Chr3:94894663-94894682 | None:intergenic | 30.0% | |
| TTTGTGGGTCAATGTTTATT+TGG | - | Chr3:94896915-94896934 | MsG0380017320.01.T01:five_prime_UTR | 30.0% | |
| ! | AACAGAATTTGAAGCAACAA+AGG | - | Chr3:94894895-94894914 | MsG0380017320.01.T01:intron | 30.0% |
| ! | ATTTGAAGCAACAAAGGAAA+TGG | - | Chr3:94894901-94894920 | MsG0380017320.01.T01:intron | 30.0% |
| ! | CAATTTTGGATCTTCTATGA+TGG | + | Chr3:94896301-94896320 | None:intergenic | 30.0% |
| ! | CTTGAAACATTTAAAGCACA+TGG | - | Chr3:94895733-94895752 | MsG0380017320.01.T01:intron | 30.0% |
| ! | GAAGTATTTGTTACATGCAT+AGG | - | Chr3:94895245-94895264 | MsG0380017320.01.T01:CDS | 30.0% |
| ! | GCCTTGTTGAGTAAATTAAT+GGG | - | Chr3:94896970-94896989 | MsG0380017320.01.T01:five_prime_UTR | 30.0% |
| ! | TAGATTTTCCAACCTTCATT+TGG | + | Chr3:94894092-94894111 | None:intergenic | 30.0% |
| ! | TCGAATTTGTCATTTATGTC+AGG | + | Chr3:94896604-94896623 | None:intergenic | 30.0% |
| ! | TCTAAAGTCTTTATTACTGC+GGG | - | Chr3:94896263-94896282 | MsG0380017320.01.T01:intron | 30.0% |
| ! | TGCCTTGTTGAGTAAATTAA+TGG | - | Chr3:94896969-94896988 | MsG0380017320.01.T01:five_prime_UTR | 30.0% |
| ! | TTGTGCCTCTAAGAATATAA+GGG | + | Chr3:94894463-94894482 | None:intergenic | 30.0% |
| ! | TTTGAAGCAACAAAGGAAAT+GGG | - | Chr3:94894902-94894921 | MsG0380017320.01.T01:intron | 30.0% |
| ! | TTTGTGCCTCTAAGAATATA+AGG | + | Chr3:94894464-94894483 | None:intergenic | 30.0% |
| !! | AAATTCTTTGATTTGGGTGT+TGG | + | Chr3:94894240-94894259 | None:intergenic | 30.0% |
| !! | AACAGATGGATTACATATTG+GGG | - | Chr3:94896389-94896408 | MsG0380017320.01.T01:intron | 30.0% |
| !! | AATGTTGGTTTGTTAACAGA+TGG | - | Chr3:94896375-94896394 | MsG0380017320.01.T01:intron | 30.0% |
| !! | AGTTGATGATCATCATTGTT+GGG | - | Chr3:94895013-94895032 | MsG0380017320.01.T01:CDS | 30.0% |
| !! | ATACCAATTTTGCTTTGTTG+AGG | + | Chr3:94895186-94895205 | None:intergenic | 30.0% |
| !! | CTACATTTTGAAGGTCAAAA+AGG | - | Chr3:94895709-94895728 | MsG0380017320.01.T01:intron | 30.0% |
| !! | GTATATCTTTGGAATCATGT+AGG | - | Chr3:94895537-94895556 | MsG0380017320.01.T01:intron | 30.0% |
| !!! | ATCAAGACTTGCTTTTTTGT+GGG | - | Chr3:94896900-94896919 | MsG0380017320.01.T01:five_prime_UTR | 30.0% |
| !!! | CTTGTTTTTTGGCAAAATCA+AGG | + | Chr3:94896053-94896072 | None:intergenic | 30.0% |
| !!! | GCATGTACTTACTTGTTTTT+TGG | + | Chr3:94896064-94896083 | None:intergenic | 30.0% |
| !!! | TTGTTTTTTCACCAATTTCC+TGG | - | Chr3:94895328-94895347 | MsG0380017320.01.T01:CDS | 30.0% |
| !!! | TTTGTCTTCATTTTTTCTGG+TGG | + | Chr3:94895041-94895060 | None:intergenic | 30.0% |
| AAAACTCCCTCCAAATAACA+GGG | - | Chr3:94894491-94894510 | MsG0380017320.01.T01:CDS | 35.0% | |
| AAAAGGAACAAGCTAAGAGA+TGG | + | Chr3:94894158-94894177 | None:intergenic | 35.0% | |
| AAGCTAAGAGATGGTTGTAA+AGG | + | Chr3:94894149-94894168 | None:intergenic | 35.0% | |
| ACATACGTTATAGCCTGAAT+AGG | + | Chr3:94895418-94895437 | None:intergenic | 35.0% | |
| AGACTGAATTAATGTTGGGT+TGG | - | Chr3:94895497-94895516 | MsG0380017320.01.T01:intron | 35.0% | |
| AGATCATACATGGTAGGATT+CGG | - | Chr3:94896427-94896446 | MsG0380017320.01.T01:intron | 35.0% | |
| ATTAGGTTCCAAATGAAGGT+TGG | - | Chr3:94894081-94894100 | MsG0380017320.01.T01:three_prime_UTR | 35.0% | |
| CAACAATGATGATCATCAAC+TGG | + | Chr3:94895014-94895033 | None:intergenic | 35.0% | |
| CACTGTGACTACATTATCAT+GGG | - | Chr3:94894856-94894875 | MsG0380017320.01.T01:intron | 35.0% | |
| CATCATAATATCCTCCAGAT+AGG | + | Chr3:94894799-94894818 | None:intergenic | 35.0% | |
| CATGTAGGATGAATTGTTGT+GGG | - | Chr3:94895552-94895571 | MsG0380017320.01.T01:intron | 35.0% | |
| CCCATGTAACCAAATACTAT+TGG | + | Chr3:94895294-94895313 | None:intergenic | 35.0% | |
| CTAATGTAGCAGAATTCAGT+TGG | - | Chr3:94895647-94895666 | MsG0380017320.01.T01:CDS | 35.0% | |
| CTGAATAGGAGCAATAGAAA+GGG | + | Chr3:94895404-94895423 | None:intergenic | 35.0% | |
| GACTGAATTAATGTTGGGTT+GGG | - | Chr3:94895498-94895517 | MsG0380017320.01.T01:intron | 35.0% | |
| GAGGATGGAATCAAATGAAA+AGG | + | Chr3:94894175-94894194 | None:intergenic | 35.0% | |
| GCAGGAGATAATGTGAAATA+TGG | - | Chr3:94894818-94894837 | MsG0380017320.01.T01:intron | 35.0% | |
| GCCAATAGTATTTGGTTACA+TGG | - | Chr3:94895290-94895309 | MsG0380017320.01.T01:CDS | 35.0% | |
| GGACAATTGATATCTTCGTT+TGG | + | Chr3:94896508-94896527 | None:intergenic | 35.0% | |
| TACCAGGAGACAAATGTATT+TGG | + | Chr3:94895801-94895820 | None:intergenic | 35.0% | |
| TATGTTAATTCTCTTGCAGC+TGG | - | Chr3:94896664-94896683 | MsG0380017320.01.T01:CDS | 35.0% | |
| TCACTGTGACTACATTATCA+TGG | - | Chr3:94894855-94894874 | MsG0380017320.01.T01:intron | 35.0% | |
| TCATGTAGGATGAATTGTTG+TGG | - | Chr3:94895551-94895570 | MsG0380017320.01.T01:intron | 35.0% | |
| TCTCCTCAACAAAGCAAAAT+TGG | - | Chr3:94895180-94895199 | MsG0380017320.01.T01:intron | 35.0% | |
| TGTAAGATGAAGCTCTCAAA+TGG | + | Chr3:94894301-94894320 | None:intergenic | 35.0% | |
| TTTGAGAGCTTCATCTTACA+AGG | - | Chr3:94894301-94894320 | MsG0380017320.01.T01:three_prime_UTR | 35.0% | |
| ! | GACAAATGTATTTGGTGGTA+AGG | + | Chr3:94895793-94895812 | None:intergenic | 35.0% |
| ! | GTAATTGATAGTAACACACC+CGG | - | Chr3:94895073-94895092 | MsG0380017320.01.T01:CDS | 35.0% |
| ! | TAGTGAGATTGCTTCTGAAA+CGG | - | Chr3:94895096-94895115 | MsG0380017320.01.T01:CDS | 35.0% |
| ! | TGTGAAATATGGGTTACCAA+TGG | - | Chr3:94894829-94894848 | MsG0380017320.01.T01:intron | 35.0% |
| ! | TTTTGGATCTTCTATGATGG+CGG | + | Chr3:94896298-94896317 | None:intergenic | 35.0% |
| !! | AGCAAGAGAGTATGTTTTAG+AGG | + | Chr3:94894194-94894213 | None:intergenic | 35.0% |
| !! | CAGTTGATGATCATCATTGT+TGG | - | Chr3:94895012-94895031 | MsG0380017320.01.T01:CDS | 35.0% |
| !!! | AGAGAGTATGTTTTAGAGGA+TGG | + | Chr3:94894190-94894209 | None:intergenic | 35.0% |
| !!! | GATCAAGACTTGCTTTTTTG+TGG | - | Chr3:94896899-94896918 | MsG0380017320.01.T01:five_prime_UTR | 35.0% |
| !!! | GTGTTGGTTTTATTTTGTGC+TGG | + | Chr3:94894224-94894243 | None:intergenic | 35.0% |
| !!! | TTGGTTTTATTTTGTGCTGG+CGG | + | Chr3:94894221-94894240 | None:intergenic | 35.0% |
| ACCATGTATGATCTTCCTTC+TGG | + | Chr3:94896421-94896440 | None:intergenic | 40.0% | |
| AGTGAACAAGAAAGATGTGC+CGG | + | Chr3:94895956-94895975 | None:intergenic | 40.0% | |
| AGTTGGGATCTTAAATACGC+TGG | - | Chr3:94895664-94895683 | MsG0380017320.01.T01:CDS | 40.0% | |
| ATATTGGGGAAAAACCCAGA+AGG | - | Chr3:94896403-94896422 | MsG0380017320.01.T01:intron | 40.0% | |
| ATTGGGCAATCATTGTAGCA+TGG | - | Chr3:94894367-94894386 | MsG0380017320.01.T01:CDS | 40.0% | |
| CACCAAATACATTTGTCTCC+TGG | - | Chr3:94895796-94895815 | MsG0380017320.01.T01:intron | 40.0% | |
| CAGGAGACAAATGTATTTGG+TGG | + | Chr3:94895798-94895817 | None:intergenic | 40.0% | |
| CCATGTATGATCTTCCTTCT+GGG | + | Chr3:94896420-94896439 | None:intergenic | 40.0% | |
| CCTGAATAGGAGCAATAGAA+AGG | + | Chr3:94895405-94895424 | None:intergenic | 40.0% | |
| CCTTTCTATTGCTCCTATTC+AGG | - | Chr3:94895402-94895421 | MsG0380017320.01.T01:CDS | 40.0% | |
| GAAAACTCCCTCCAAATAAC+AGG | - | Chr3:94894490-94894509 | MsG0380017320.01.T01:CDS | 40.0% | |
| GAAGGAAGATCATACATGGT+AGG | - | Chr3:94896421-94896440 | MsG0380017320.01.T01:intron | 40.0% | |
| GATCATACATGGTAGGATTC+GGG | - | Chr3:94896428-94896447 | MsG0380017320.01.T01:intron | 40.0% | |
| GCCAATACACAATATGCTAC+CGG | - | Chr3:94895934-94895953 | MsG0380017320.01.T01:CDS | 40.0% | |
| TATGTGCAAGGTTCAGTCTT+AGG | + | Chr3:94896646-94896665 | None:intergenic | 40.0% | |
| TCGAAATGGCTGCAAAGAAA+TGG | - | Chr3:94896538-94896557 | MsG0380017320.01.T01:CDS | 40.0% | |
| TCTGGAGGATATTATGATGC+AGG | - | Chr3:94894800-94894819 | MsG0380017320.01.T01:intron | 40.0% | |
| TTCAGAAGCAATCTCACTAC+CGG | + | Chr3:94895095-94895114 | None:intergenic | 40.0% | |
| ! | AAGGAACCCTGTTATTTGGA+GGG | + | Chr3:94894500-94894519 | None:intergenic | 40.0% |
| ! | ATTTGGTGGTAAGGACTATC+AGG | + | Chr3:94895784-94895803 | None:intergenic | 40.0% |
| ! | CTAGCAAAGCTTGCTTCTTT+GGG | - | Chr3:94896691-94896710 | MsG0380017320.01.T01:exon | 40.0% |
| ! | CTCACTCAGCTACATTTTGA+AGG | - | Chr3:94895700-94895719 | MsG0380017320.01.T01:intron | 40.0% |
| ! | TCTAGCAAAGCTTGCTTCTT+TGG | - | Chr3:94896690-94896709 | MsG0380017320.01.T01:exon | 40.0% |
| ! | TCTTCGTTTGGTGACAACTT+TGG | + | Chr3:94896496-94896515 | None:intergenic | 40.0% |
| ! | TTCTTAGAGGCACAAAGATC+AGG | - | Chr3:94894468-94894487 | MsG0380017320.01.T01:CDS | 40.0% |
| !!! | TGGTTTTATTTTGTGCTGGC+GGG | + | Chr3:94894220-94894239 | None:intergenic | 40.0% |
| AATAACAGGGTTCCTTGGAG+AGG | - | Chr3:94894504-94894523 | MsG0380017320.01.T01:CDS | 45.0% | |
| AATTGTTGTGGGCAGCAACT+TGG | - | Chr3:94895563-94895582 | MsG0380017320.01.T01:intron | 45.0% | |
| ACCTCTATGATGAGCTTGTG+TGG | + | Chr3:94896464-94896483 | None:intergenic | 45.0% | |
| AGCCATTTCGAAAAGCTCGT+GGG | + | Chr3:94896529-94896548 | None:intergenic | 45.0% | |
| CCAAATCCACATGAGCTAAC+TGG | - | Chr3:94896562-94896581 | MsG0380017320.01.T01:CDS | 45.0% | |
| CCAGTTAGCTCATGTGGATT+TGG | + | Chr3:94896565-94896584 | None:intergenic | 45.0% | |
| CCCAGAAGGAAGATCATACA+TGG | - | Chr3:94896417-94896436 | MsG0380017320.01.T01:intron | 45.0% | |
| CCTCTATGATGAGCTTGTGT+GGG | + | Chr3:94896463-94896482 | None:intergenic | 45.0% | |
| CTCCAAATAACAGGGTTCCT+TGG | - | Chr3:94894499-94894518 | MsG0380017320.01.T01:CDS | 45.0% | |
| CTCCAAGGAACCCTGTTATT+TGG | + | Chr3:94894504-94894523 | None:intergenic | 45.0% | |
| GAAAGGGGAGACCTTACTAA+AGG | - | Chr3:94896771-94896790 | MsG0380017320.01.T01:five_prime_UTR | 45.0% | |
| GAGATGGTTGTAAAGGCAAG+AGG | + | Chr3:94894142-94894161 | None:intergenic | 45.0% | |
| GCATGGCTTACTTTGTTCCA+AGG | - | Chr3:94894384-94894403 | MsG0380017320.01.T01:CDS | 45.0% | |
| GCCGGTAGCATATTGTGTAT+TGG | + | Chr3:94895938-94895957 | None:intergenic | 45.0% | |
| GGACAAGTATCATGCTTCCT+TGG | + | Chr3:94894404-94894423 | None:intergenic | 45.0% | |
| GTAGTCACAGTGAATGCCAT+TGG | + | Chr3:94894848-94894867 | None:intergenic | 45.0% | |
| TATGTCAGGTCCACCTACAA+TGG | + | Chr3:94896590-94896609 | None:intergenic | 45.0% | |
| TCAGAAGCAATCTCACTACC+GGG | + | Chr3:94895094-94895113 | None:intergenic | 45.0% | |
| TCGAAAAGCTGCCAGGAAAT+TGG | + | Chr3:94895342-94895361 | None:intergenic | 45.0% | |
| TGAATGTAGGTCGACCTATC+TGG | - | Chr3:94894782-94894801 | MsG0380017320.01.T01:intron | 45.0% | |
| ! | AGGAAGCATGATACTTGTCC+AGG | - | Chr3:94894404-94894423 | MsG0380017320.01.T01:CDS | 45.0% |
| ! | CAAGGAACCCTGTTATTTGG+AGG | + | Chr3:94894501-94894520 | None:intergenic | 45.0% |
| ! | GGAAGCATGATACTTGTCCA+GGG | - | Chr3:94894405-94894424 | MsG0380017320.01.T01:CDS | 45.0% |
| ! | TTCCTGGCAGCTTTTCGATT+TGG | - | Chr3:94895344-94895363 | MsG0380017320.01.T01:CDS | 45.0% |
| ATGGCTCCAGTTAGCTCATG+TGG | + | Chr3:94896571-94896590 | None:intergenic | 50.0% | |
| ATGTAGGTCGACCTATCTGG+AGG | - | Chr3:94894785-94894804 | MsG0380017320.01.T01:intron | 50.0% | |
| CAGCCATTTCGAAAAGCTCG+TGG | + | Chr3:94896530-94896549 | None:intergenic | 50.0% | |
| CCCACACAAGCTCATCATAG+AGG | - | Chr3:94896460-94896479 | MsG0380017320.01.T01:intron | 50.0% | |
| CTAACTGGAGCCATTGTAGG+TGG | - | Chr3:94896577-94896596 | MsG0380017320.01.T01:CDS | 50.0% | |
| CTATGATGAGCTTGTGTGGG+TGG | + | Chr3:94896460-94896479 | None:intergenic | 50.0% | |
| GAGCTAACTGGAGCCATTGT+AGG | - | Chr3:94896574-94896593 | MsG0380017320.01.T01:CDS | 50.0% | |
| GGCAGCAACTTGGCTATACA+TGG | - | Chr3:94895573-94895592 | MsG0380017320.01.T01:intron | 50.0% | |
| GGTGGTAAGGACTATCAGGA+AGG | + | Chr3:94895780-94895799 | None:intergenic | 50.0% | |
| TGCCAAATCGAAAAGCTGCC+AGG | + | Chr3:94895349-94895368 | None:intergenic | 50.0% | |
| ! | GTCCCACGAGCTTTTCGAAA+TGG | - | Chr3:94896524-94896543 | MsG0380017320.01.T01:CDS | 50.0% |
| !! | TTCTGAAACGGCTGCTGCTA+TGG | - | Chr3:94895108-94895127 | MsG0380017320.01.T01:CDS | 50.0% |
| GGTTCCTTGGAGAGGAGACT+CGG | - | Chr3:94894512-94894531 | MsG0380017320.01.T01:CDS | 55.0% | |
| ACAGCCGAGTCTCCTCTCCA+AGG | + | Chr3:94894519-94894538 | None:intergenic | 60.0% | |
| GGAGACTCGGCTGTCGATGA+TGG | - | Chr3:94894525-94894544 | MsG0380017320.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 94894063 | 94896993 | 94894063 | ID=MsG0380017320.01;Name=MsG0380017320.01 |
| Chr3 | mRNA | 94894063 | 94896993 | 94894063 | ID=MsG0380017320.01.T01;Parent=MsG0380017320.01;Name=MsG0380017320.01.T01;_AED=0.28;_eAED=0.28;_QI=285|0.83|0.71|1|0.66|0.85|7|276|450 |
| Chr3 | exon | 94894063 | 94894662 | 94894063 | ID=MsG0380017320.01.T01:exon:35248;Parent=MsG0380017320.01.T01 |
| Chr3 | exon | 94894985 | 94895148 | 94894985 | ID=MsG0380017320.01.T01:exon:35247;Parent=MsG0380017320.01.T01 |
| Chr3 | exon | 94895239 | 94895497 | 94895239 | ID=MsG0380017320.01.T01:exon:35246;Parent=MsG0380017320.01.T01 |
| Chr3 | exon | 94895625 | 94895702 | 94895625 | ID=MsG0380017320.01.T01:exon:35245;Parent=MsG0380017320.01.T01 |
| Chr3 | exon | 94895855 | 94895957 | 94895855 | ID=MsG0380017320.01.T01:exon:35244;Parent=MsG0380017320.01.T01 |
| Chr3 | exon | 94896054 | 94896265 | 94896054 | ID=MsG0380017320.01.T01:exon:35243;Parent=MsG0380017320.01.T01 |
| Chr3 | exon | 94896496 | 94896993 | 94896496 | ID=MsG0380017320.01.T01:exon:35242;Parent=MsG0380017320.01.T01 |
| Chr3 | five_prime_UTR | 94896709 | 94896993 | 94896709 | ID=MsG0380017320.01.T01:five_prime_utr;Parent=MsG0380017320.01.T01 |
| Chr3 | CDS | 94896496 | 94896708 | 94896496 | ID=MsG0380017320.01.T01:cds;Parent=MsG0380017320.01.T01 |
| Chr3 | CDS | 94896054 | 94896265 | 94896054 | ID=MsG0380017320.01.T01:cds;Parent=MsG0380017320.01.T01 |
| Chr3 | CDS | 94895855 | 94895957 | 94895855 | ID=MsG0380017320.01.T01:cds;Parent=MsG0380017320.01.T01 |
| Chr3 | CDS | 94895625 | 94895702 | 94895625 | ID=MsG0380017320.01.T01:cds;Parent=MsG0380017320.01.T01 |
| Chr3 | CDS | 94895239 | 94895497 | 94895239 | ID=MsG0380017320.01.T01:cds;Parent=MsG0380017320.01.T01 |
| Chr3 | CDS | 94894985 | 94895148 | 94894985 | ID=MsG0380017320.01.T01:cds;Parent=MsG0380017320.01.T01 |
| Chr3 | CDS | 94894339 | 94894662 | 94894339 | ID=MsG0380017320.01.T01:cds;Parent=MsG0380017320.01.T01 |
| Chr3 | three_prime_UTR | 94894063 | 94894338 | 94894063 | ID=MsG0380017320.01.T01:three_prime_utr;Parent=MsG0380017320.01.T01 |
| Gene Sequence |
| Protein sequence |
