AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017578.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017578.01.T01 MTR_3g109300 91.275 447 13 2 127 555 233 671 0.0 773
MsG0380017578.01.T01 MTR_1g009010 89.021 419 28 1 154 554 2 420 0.0 725
MsG0380017578.01.T01 MTR_3g109290 92.381 105 7 1 1 104 1 105 1.36e-46 159
MsG0380017578.01.T01 MTR_7g087530 25.197 254 181 3 265 512 150 400 1.86e-18 88.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017578.01.T01 AT1G29150 82.892 415 52 2 159 555 6 419 0.0 662
MsG0380017578.01.T01 AT1G29150 82.892 415 52 2 159 555 6 419 0.0 662
MsG0380017578.01.T01 AT2G26990 23.228 254 186 4 265 512 150 400 4.39e-14 75.1

Find 137 sgRNAs with CRISPR-Local

Find 575 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGCTTTGACTCTTCTTTC+TGG 0.076579 3:+98050262 MsG0380017578.01.T01:CDS
GAAGATGTCTCAGATGATTT+TGG 0.221126 3:+98050915 MsG0380017578.01.T01:CDS
TCGTTGTCGTGGAGAGATTC+TGG 0.249139 3:-98042665 None:intergenic
TACACAACAACATATATTTC+AGG 0.264578 3:-98050576 None:intergenic
CTTAGGAATCAAGGAGAAAA+AGG 0.267105 3:-98050054 None:intergenic
AAGCTTTGACTCTTCTTTCT+GGG 0.325672 3:+98050263 MsG0380017578.01.T01:CDS
CAAGAAGTTTGCTGGGACAT+TGG 0.347751 3:+98050939 MsG0380017578.01.T01:CDS
GGGTGGAATTATTTCTTCTA+AGG 0.348906 3:+98050627 MsG0380017578.01.T01:CDS
ACCTTCTCAGGCAAGAGAAC+AGG 0.350066 3:+98049994 MsG0380017578.01.T01:CDS
CCGGACTCCACGTTCTAACT+TGG 0.350796 3:-98045364 None:intergenic
TCTTTCATACGCAGAGCTTC+TGG 0.357829 3:-98049948 None:intergenic
GAAATGGTCTCTAAAGTTGC+AGG 0.361989 3:-98051018 None:intergenic
ATCCCTGTATGATACCCTTC+TGG 0.369495 3:+98050798 MsG0380017578.01.T01:CDS
CGATAGATAGGCAAACAAAT+TGG 0.381481 3:+98045282 MsG0380017578.01.T01:CDS
TGGTTGACAGTCTTTATGTT+AGG 0.381996 3:+98051055 MsG0380017578.01.T01:CDS
CACTTTCCCAACATTGGAAA+TGG 0.391471 3:-98051034 None:intergenic
GAAATGTGTCTGTGAACAAT+TGG 0.398724 3:-98050775 None:intergenic
TATTCCACTCTGAAGATCTA+TGG 0.400897 3:-98050455 None:intergenic
TGTATGTTTCCACGATAGAT+AGG 0.401436 3:+98045270 MsG0380017578.01.T01:CDS
CTGGGTTGGTCAAAGAGGTT+AGG 0.401504 3:+98050281 MsG0380017578.01.T01:CDS
TTCCGCTCAACGTGAACAAT+TGG 0.403038 3:-98050895 None:intergenic
CTAGTGGGCTCAGGCCCTTT+AGG 0.404133 3:-98042773 None:intergenic
TAGAGACCATTTCCAATGTT+GGG 0.407846 3:+98051028 MsG0380017578.01.T01:CDS
GTGAGGTAGGTGGGCCTAAA+GGG 0.409765 3:+98042759 MsG0380017578.01.T01:CDS
TTTGACTCTTCTTTCTGGGT+TGG 0.413470 3:+98050267 MsG0380017578.01.T01:CDS
GTTCTGAGTGGAGGAGGAGG+AGG 0.413856 3:-98042609 None:intergenic
AGTAGGGTTGGATGCGGTGG+TGG 0.414796 3:-98042519 None:intergenic
GGTGAGGTAGGTGGGCCTAA+AGG 0.419631 3:+98042758 MsG0380017578.01.T01:CDS
CAGGACTACAAGGCACAGTT+GGG 0.423474 3:+98050745 MsG0380017578.01.T01:CDS
TTCTGGAGCAGAATCTTTGT+AGG 0.427259 3:+98050815 MsG0380017578.01.T01:CDS
TCGTGGAGAGATTCTGGCTT+CGG 0.427431 3:-98042659 None:intergenic
CAAACAAATTGGCATGTTTG+TGG 0.428600 3:+98045293 MsG0380017578.01.T01:CDS
GGGTATATTGCATCAGTCTT+GGG 0.434505 3:-98050997 None:intergenic
CATTTCCAATGTTGGGAAAG+TGG 0.438184 3:+98051035 MsG0380017578.01.T01:CDS
CCCTGTTCTCTTGCCTGAGA+AGG 0.446003 3:-98049995 None:intergenic
CAAATCTTACTGACCTTCTC+AGG 0.450662 3:+98049982 MsG0380017578.01.T01:CDS
AGGGTATATTGCATCAGTCT+TGG 0.452702 3:-98050998 None:intergenic
TTCAGGCTGAAAATAGCCTT+AGG 0.454754 3:-98050559 None:intergenic
GGAATTATTTCTTCTAAGGC+AGG 0.456178 3:+98050631 MsG0380017578.01.T01:CDS
TCTATGGCCCCTTGTTGAGC+AGG 0.465189 3:-98050439 None:intergenic
GATTTCACTGTGTAAAGAAA+TGG 0.466235 3:+98050147 MsG0380017578.01.T01:intron
ACGAGTCAGGTGTTCGGATC+CGG 0.469312 3:-98042552 None:intergenic
GGATTCAATTGCTCAGGCAT+TGG 0.471759 3:+98049860 MsG0380017578.01.T01:CDS
ATCAAGTACACGATAAAGAA+TGG 0.473844 3:-98049910 None:intergenic
GCTCCAGAAGGGTATCATAC+AGG 0.475823 3:-98050801 None:intergenic
TGTTAGGTCTGCTAAGATCA+TGG 0.476830 3:+98051071 MsG0380017578.01.T01:CDS
AAGGCAGGATTGCAATATGT+TGG 0.477736 3:+98050646 MsG0380017578.01.T01:CDS
ATTGATATGAACAAAGAAAC+GGG 0.478803 3:+98042737 MsG0380017578.01.T01:CDS
GAGAGTAGGGTTGGATGCGG+TGG 0.484387 3:-98042522 None:intergenic
AACAGAACGAGTCAGGTGTT+CGG 0.485728 3:-98042558 None:intergenic
GCTTTCATCGCATCCAAGTC+AGG 0.487211 3:-98050670 None:intergenic
TTAGAGACCATTTCCAATGT+TGG 0.488579 3:+98051027 MsG0380017578.01.T01:CDS
GTCAACCACTTTCCCAACAT+TGG 0.489301 3:-98051040 None:intergenic
GCAGGACTACAAGGCACAGT+TGG 0.489808 3:+98050744 MsG0380017578.01.T01:CDS
TATTGATATGAACAAAGAAA+CGG 0.492514 3:+98042736 MsG0380017578.01.T01:CDS
AGTTGGAAACAGAACGAGTC+AGG 0.494435 3:-98042565 None:intergenic
TTCAATTGCTCAGGCATTGG+AGG 0.497862 3:+98049863 MsG0380017578.01.T01:CDS
GGAGAGCAAGCGAGGGAAAG+AGG 0.497873 3:-98042498 None:intergenic
AGGCAGGATTGCAATATGTT+GGG 0.501095 3:+98050647 MsG0380017578.01.T01:CDS
AACTGCTTTGCAGGACTACA+AGG 0.501162 3:+98050735 MsG0380017578.01.T01:CDS
GAGGAGTCGCGTGACTGAGT+TGG 0.507145 3:-98042582 None:intergenic
CTAAAGGGCCTGAGCCCACT+AGG 0.510561 3:+98042774 MsG0380017578.01.T01:CDS
CAATGCTCTTGAAGACCCTA+AGG 0.511010 3:+98050543 MsG0380017578.01.T01:CDS
GCAATATGTTGGGCCTGACT+TGG 0.511624 3:+98050657 MsG0380017578.01.T01:CDS
TCGCCATACCTAGTGGGCTC+AGG 0.513842 3:-98042782 None:intergenic
CCTTCTCAGGCAAGAGAACA+GGG 0.514248 3:+98049995 MsG0380017578.01.T01:CDS
CAACGATAAACAAAGCCAAA+AGG 0.517300 3:+98042682 MsG0380017578.01.T01:CDS
CTCGTTGTGGTTCTGAGTGG+AGG 0.517652 3:-98042618 None:intergenic
TCAGGCTGAAAATAGCCTTA+GGG 0.519784 3:-98050558 None:intergenic
GCAATCTCAACTCTTGAGAA+TGG 0.520686 3:-98050847 None:intergenic
GCAATTGAATCCGTTGTGGC+AGG 0.520844 3:-98049849 None:intergenic
ATCGAATATAACGAGGCATC+CGG 0.522107 3:-98050971 None:intergenic
GGCTTTGTTTATCGTTGTCG+TGG 0.523906 3:-98042676 None:intergenic
CACAACGGATTCAATTGCTC+AGG 0.533092 3:+98049854 MsG0380017578.01.T01:CDS
GATCCGGTGCGGAAGAGAGT+AGG 0.535139 3:-98042536 None:intergenic
GTGTTTGTTCCTTCTCGTTG+TGG 0.535215 3:-98042631 None:intergenic
AAGAGCATTGAAAGACTCAA+AGG 0.538169 3:-98050530 None:intergenic
AGCTCTGCGTATGAAAGAGC+AGG 0.542904 3:+98049953 MsG0380017578.01.T01:CDS
CTCCAGAAGGGTATCATACA+GGG 0.544409 3:-98050800 None:intergenic
ATTTGTTTGCCTATCTATCG+TGG 0.544836 3:-98045279 None:intergenic
GTGGTTCTGAGTGGAGGAGG+AGG 0.545418 3:-98042612 None:intergenic
CAGCTGTTCTAGCAGCCGTG+AGG 0.548019 3:-98050396 None:intergenic
AGAGCTTCTGGTGAAGAAGA+TGG 0.548989 3:-98049936 None:intergenic
TATGTTGTTGTGTAAGATCA+TGG 0.550906 3:+98050585 MsG0380017578.01.T01:CDS
AATACTTCATGCTGAGGAGA+AGG 0.551692 3:+98050474 MsG0380017578.01.T01:CDS
TTCCAATTGTTCACGTTGAG+CGG 0.552851 3:+98050893 MsG0380017578.01.T01:CDS
TCTTTCTGGGTTGGTCAAAG+AGG 0.554089 3:+98050276 MsG0380017578.01.T01:CDS
AGCTGTTCTAGCAGCCGTGA+GGG 0.554968 3:-98050395 None:intergenic
TTTGCTGGGACATTGGATCA+AGG 0.555668 3:+98050946 MsG0380017578.01.T01:CDS
AACCCTACTCTCTTCCGCAC+CGG 0.555694 3:+98042533 MsG0380017578.01.T01:CDS
AAATGTGTCTGTGAACAATT+GGG 0.557966 3:-98050774 None:intergenic
CTTCTCGTTGTGGTTCTGAG+TGG 0.559498 3:-98042621 None:intergenic
TATGTGCCTCCTGCTCAACA+AGG 0.559971 3:+98050430 MsG0380017578.01.T01:CDS
ATCCGGTGCGGAAGAGAGTA+GGG 0.565239 3:-98042535 None:intergenic
GCGGTGGTGGAGAGCAAGCG+AGG 0.567183 3:-98042506 None:intergenic
TACAAAGATTCTGCTCCAGA+AGG 0.569886 3:-98050813 None:intergenic
AGAATGGATATCGCATCAGA+AGG 0.570735 3:-98049894 None:intergenic
GTTGTGGTTCTGAGTGGAGG+AGG 0.580020 3:-98042615 None:intergenic
GAATGGATATCGCATCAGAA+GGG 0.585707 3:-98049893 None:intergenic
GGGACATTGGATCAAGGTGC+CGG 0.586404 3:+98050952 MsG0380017578.01.T01:CDS
GCAGCCTTCTCACTTCATTG+AGG 0.586407 3:+98050030 MsG0380017578.01.T01:CDS
CTCATTAAGAAACCTTCCAA+AGG 0.587775 3:+98050363 MsG0380017578.01.T01:CDS
GGTGCGGAAGAGAGTAGGGT+TGG 0.587811 3:-98042531 None:intergenic
AAAGAAACGGGTGAGGTAGG+TGG 0.590015 3:+98042749 MsG0380017578.01.T01:CDS
CAGGCAAGAGAACAGGGGAG+AGG 0.594061 3:+98050001 MsG0380017578.01.T01:CDS
ATCTTATCTTCCTGCCACAA+CGG 0.596364 3:+98049839 MsG0380017578.01.T01:CDS
TCCCAATCGCCATACCTAGT+GGG 0.604977 3:-98042788 None:intergenic
AAAGGCAAAAGCTGCCCTCA+CGG 0.605293 3:+98050381 MsG0380017578.01.T01:CDS
AAGGTCAGTAAGATTTGTGA+TGG 0.606087 3:-98049976 None:intergenic
CGGACTCCACGTTCTAACTT+GGG 0.608316 3:-98045363 None:intergenic
AAGAAACGGGTGAGGTAGGT+GGG 0.611633 3:+98042750 MsG0380017578.01.T01:CDS
AGGGCCTCAATGAAGTGAGA+AGG 0.611750 3:-98050034 None:intergenic
ATGTGCCTCCTGCTCAACAA+GGG 0.612734 3:+98050431 MsG0380017578.01.T01:CDS
ATGGCCCCTTGTTGAGCAGG+AGG 0.618931 3:-98050436 None:intergenic
CACTCAGAACCACAACGAGA+AGG 0.619911 3:+98042622 MsG0380017578.01.T01:CDS
ACAAAGATTCTGCTCCAGAA+GGG 0.620348 3:-98050812 None:intergenic
AACAAAGAAACGGGTGAGGT+AGG 0.628432 3:+98042746 MsG0380017578.01.T01:CDS
GAAGAGAGTAGGGTTGGATG+CGG 0.636267 3:-98042525 None:intergenic
GAGTGGAATACTTCATGCTG+AGG 0.636952 3:+98050468 MsG0380017578.01.T01:CDS
AAATGGTCTCTAAAGTTGCA+GGG 0.639902 3:-98051017 None:intergenic
CGGTGGTGGAGAGCAAGCGA+GGG 0.639905 3:-98042505 None:intergenic
CATGTATGTAGCTAAAATCG+TGG 0.645072 3:+98045244 MsG0380017578.01.T01:CDS
TGTGCCTCCTGCTCAACAAG+GGG 0.645095 3:+98050432 MsG0380017578.01.T01:CDS
TATGAACAAAGAAACGGGTG+AGG 0.649938 3:+98042742 MsG0380017578.01.T01:CDS
TCAGGTGTTCGGATCCGGTG+CGG 0.660989 3:-98042547 None:intergenic
AGGAAGATAAGATGTAGACA+TGG 0.676910 3:-98049829 None:intergenic
TTCATGCCCAAGTTAGAACG+TGG 0.677085 3:+98045357 MsG0380017578.01.T01:CDS
AGGACTACAAGGCACAGTTG+GGG 0.686447 3:+98050746 MsG0380017578.01.T01:CDS
GGACTACAAGGCACAGTTGG+GGG 0.689123 3:+98050747 MsG0380017578.01.T01:CDS
CTGAGCAATTGAATCCGTTG+TGG 0.699339 3:-98049853 None:intergenic
TGTGTAAAGAAATGGTGCAG+TGG 0.703348 3:+98050155 MsG0380017578.01.T01:CDS
AATCAAGCTGATGACGTGGG+TGG 0.707192 3:+98050610 MsG0380017578.01.T01:CDS
CTTCTCAGGCAAGAGAACAG+GGG 0.711755 3:+98049996 MsG0380017578.01.T01:CDS
GGTGAATCAAGCTGATGACG+TGG 0.718460 3:+98050606 MsG0380017578.01.T01:CDS
GGGGCCATAGATCTTCAGAG+TGG 0.726182 3:+98050451 MsG0380017578.01.T01:CDS
GTGAATCAAGCTGATGACGT+GGG 0.744573 3:+98050607 MsG0380017578.01.T01:CDS
TGGGATCATCGAATATAACG+AGG 0.757360 3:-98050978 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAATTTGAATGAAAAAT+AGG - Chr3:98042913-98042932 None:intergenic 10.0%
!! TGAGTAAAAAAAATATTAAA+TGG + Chr3:98048021-98048040 MsG0380017578.01.T01:intron 10.0%
!! TTAAATACAAAAAAGAAAAA+AGG - Chr3:98047194-98047213 None:intergenic 10.0%
!!! AAAAAGTATTTTTTTTTAGT+GGG + Chr3:98043869-98043888 MsG0380017578.01.T01:intron 10.0%
!!! AATACATCTTTATTTTATTA+TGG - Chr3:98043553-98043572 None:intergenic 10.0%
!!! ATACATCTTTATTTTATTAT+GGG - Chr3:98043552-98043571 None:intergenic 10.0%
!!! TATTTGAAAAATCTTTTTTT+AGG - Chr3:98047431-98047450 None:intergenic 10.0%
!!! TTTTTGTATTTAACAATTTT+TGG + Chr3:98047201-98047220 MsG0380017578.01.T01:intron 10.0%
!! AAAGAAAATCAAATATAAGA+CGG + Chr3:98048131-98048150 MsG0380017578.01.T01:intron 15.0%
!! AATTTATTATGTTATGGTAT+TGG - Chr3:98042867-98042886 None:intergenic 15.0%
!! ATACCAAATTTATTATGTTA+TGG - Chr3:98042873-98042892 None:intergenic 15.0%
!! ATACCATAACATAATAAATT+TGG + Chr3:98042867-98042886 MsG0380017578.01.T01:intron 15.0%
!! ATATCATAAAAAAAATGAGA+TGG + Chr3:98047373-98047392 MsG0380017578.01.T01:intron 15.0%
!! ATTTAAGAAAAAGTGAAATA+AGG + Chr3:98047404-98047423 MsG0380017578.01.T01:intron 15.0%
!! CAATTTAATTATAAAGAAAC+TGG + Chr3:98046879-98046898 MsG0380017578.01.T01:intron 15.0%
!! TATAAAAAGATAACTATGTA+AGG - Chr3:98048617-98048636 None:intergenic 15.0%
!! TTTAAGAAAAAGTGAAATAA+GGG + Chr3:98047405-98047424 MsG0380017578.01.T01:intron 15.0%
!! TTTATAAAAACTGAAGTAAA+AGG + Chr3:98048631-98048650 MsG0380017578.01.T01:intron 15.0%
!!! AAAAGTATTTTTTTTTAGTG+GGG + Chr3:98043870-98043889 MsG0380017578.01.T01:intron 15.0%
!!! AGAAAAAAGGTTTTTAAAAT+AGG - Chr3:98047181-98047200 None:intergenic 15.0%
!!! AGATTTGTTTTTATATTTTG+AGG - Chr3:98048104-98048123 None:intergenic 15.0%
!!! AGGATTAATTAATTTTGATT+AGG + Chr3:98048651-98048670 MsG0380017578.01.T01:intron 15.0%
!!! ATTTAAGATTCATTAGAAAT+GGG + Chr3:98045877-98045896 MsG0380017578.01.T01:intron 15.0%
!!! ATTTATGGTTTAATTTTATG+AGG - Chr3:98043649-98043668 None:intergenic 15.0%
!!! CTTATATTTGATTTTCTTTT+TGG - Chr3:98048130-98048149 None:intergenic 15.0%
!!! GAAAAAGTATTTTTTTTTAG+TGG + Chr3:98043868-98043887 MsG0380017578.01.T01:intron 15.0%
!!! GTTTTGATTTTAAAAGAAAA+AGG - Chr3:98049150-98049169 None:intergenic 15.0%
!!! TAATAAGTTTTAATGATTGA+GGG - Chr3:98043158-98043177 None:intergenic 15.0%
!!! TTAATAAGTTTTAATGATTG+AGG - Chr3:98043159-98043178 None:intergenic 15.0%
!!! TTAGATATTTTTTTTTTGAG+TGG + Chr3:98047247-98047266 MsG0380017578.01.T01:intron 15.0%
!!! TTTATAACTATTTTCTTCTT+AGG + Chr3:98048705-98048724 MsG0380017578.01.T01:intron 15.0%
!!! TTTTTAGCATTCAATTTTAA+GGG + Chr3:98049719-98049738 MsG0380017578.01.T01:intron 15.0%
!!! TTTTTTAGCATTCAATTTTA+AGG + Chr3:98049718-98049737 MsG0380017578.01.T01:intron 15.0%
!! AAAAACTAAAACTAGTATTG+TGG - Chr3:98049561-98049580 None:intergenic 20.0%
!! AAACAAATCAAAAAAAAACC+TGG - Chr3:98048264-98048283 None:intergenic 20.0%
!! AACTATTACAACCTATTAAA+AGG - Chr3:98044100-98044119 None:intergenic 20.0%
!! AAGAAAATCAAATATAAGAC+GGG + Chr3:98048132-98048151 MsG0380017578.01.T01:intron 20.0%
!! ATAAGAAAATTGGTTGAAAT+TGG + Chr3:98047041-98047060 MsG0380017578.01.T01:intron 20.0%
!! ATGAGAATTCCATTAATTAA+GGG + Chr3:98044777-98044796 MsG0380017578.01.T01:intron 20.0%
!! ATTCTTATAAATAGAGGAAA+GGG + Chr3:98044900-98044919 MsG0380017578.01.T01:intron 20.0%
!! CAAGAAAAAAAAAAAAACAC+CGG + Chr3:98049060-98049079 MsG0380017578.01.T01:intron 20.0%
!! GAAATGAGTTCAATAATTTA+CGG + Chr3:98044589-98044608 MsG0380017578.01.T01:intron 20.0%
!! TAAGAAAATTGGTTGAAATT+GGG + Chr3:98047042-98047061 MsG0380017578.01.T01:intron 20.0%
!! TAGATTATGAATTACAATTG+AGG + Chr3:98045854-98045873 MsG0380017578.01.T01:intron 20.0%
!! TAGTAATTGTAGCTTAATAT+TGG + Chr3:98048368-98048387 MsG0380017578.01.T01:intron 20.0%
!! TATTGATATGAACAAAGAAA+CGG + Chr3:98042736-98042755 MsG0380017578.01.T01:CDS 20.0%
!! TGCAAAAAAAATAGTAAATG+AGG - Chr3:98049805-98049824 None:intergenic 20.0%
!! TGTAAGATTCTTATAAATAG+AGG + Chr3:98044894-98044913 MsG0380017578.01.T01:intron 20.0%
!! TTAATAGGTTGTAATAGTTT+AGG + Chr3:98044101-98044120 MsG0380017578.01.T01:intron 20.0%
!! TTGTAGAATTATATTTCACA+TGG + Chr3:98045942-98045961 MsG0380017578.01.T01:intron 20.0%
!!! AAAAAGGTTTTTAAAATAGG+TGG - Chr3:98047178-98047197 None:intergenic 20.0%
!!! AAAATCCTTTTATTTGTGTT+TGG + Chr3:98044423-98044442 MsG0380017578.01.T01:intron 20.0%
!!! AAACAGAAACTTGTTTTTAT+CGG + Chr3:98048505-98048524 MsG0380017578.01.T01:intron 20.0%
!!! AAAGTATTTTTTTTTAGTGG+GGG + Chr3:98043871-98043890 MsG0380017578.01.T01:intron 20.0%
!!! AAATCAACATTTTAAATACG+AGG - Chr3:98047088-98047107 None:intergenic 20.0%
!!! AAATCCTTTTATTTGTGTTT+GGG + Chr3:98044424-98044443 MsG0380017578.01.T01:intron 20.0%
!!! AGTTTTTCAAATTGCTAAAT+TGG - Chr3:98043675-98043694 None:intergenic 20.0%
!!! ATTCACATTTTTATCATGTT+CGG + Chr3:98048993-98049012 MsG0380017578.01.T01:intron 20.0%
!!! CTTATTATTACAAGTTTTAC+TGG + Chr3:98043059-98043078 MsG0380017578.01.T01:intron 20.0%
!!! GATTTAAGATTCATTAGAAA+TGG + Chr3:98045876-98045895 MsG0380017578.01.T01:intron 20.0%
!!! GTGCGATTTTTTTTTTTAAT+AGG + Chr3:98047615-98047634 MsG0380017578.01.T01:intron 20.0%
!!! TATGAATTCTTGTTTACATA+AGG + Chr3:98043275-98043294 MsG0380017578.01.T01:intron 20.0%
!!! TATTTGTTGTATTTCAAAAC+TGG + Chr3:98049332-98049351 MsG0380017578.01.T01:intron 20.0%
!!! TATTTTCACTAAAACAGAAA+AGG - Chr3:98048740-98048759 None:intergenic 20.0%
!!! TCACATGGTTTTTTTTTTTT+GGG + Chr3:98045957-98045976 MsG0380017578.01.T01:intron 20.0%
!!! TTATATTGTGATGGTTTTAT+AGG + Chr3:98044546-98044565 MsG0380017578.01.T01:intron 20.0%
!!! TTCACATGGTTTTTTTTTTT+TGG + Chr3:98045956-98045975 MsG0380017578.01.T01:intron 20.0%
!!! TTGTTTTTATATTTTGAGGA+AGG - Chr3:98048100-98048119 None:intergenic 20.0%
!!! TTTCACAAGTTTTTGTTTTT+TGG + Chr3:98046309-98046328 MsG0380017578.01.T01:intron 20.0%
! AAAAACTGCAAAGATTGTAA+GGG + Chr3:98050079-98050098 MsG0380017578.01.T01:intron 25.0%
! AAAAACTTGTGAAATGCATA+TGG - Chr3:98046303-98046322 None:intergenic 25.0%
! AAAAAGGATTATCAATGCAT+CGG - Chr3:98049134-98049153 None:intergenic 25.0%
! AAAACTTGTGAAATGCATAT+GGG - Chr3:98046302-98046321 None:intergenic 25.0%
! AAAGAAAAACGAAACAATGA+TGG + Chr3:98043810-98043829 MsG0380017578.01.T01:intron 25.0%
! AAGAAAATTGGTTGAAATTG+GGG + Chr3:98047043-98047062 MsG0380017578.01.T01:intron 25.0%
! AAGACTTATGACTGTTTAAA+TGG - Chr3:98046850-98046869 None:intergenic 25.0%
! AAGATACTAAAAGGTAAATG+AGG - Chr3:98046577-98046596 None:intergenic 25.0%
! AATATGAACATATATTGAGG+AGG + Chr3:98046117-98046136 MsG0380017578.01.T01:intron 25.0%
! AATATTAAGAACGTTCAATG+TGG + Chr3:98045752-98045771 MsG0380017578.01.T01:intron 25.0%
! ACATTGTTATATCCTCATAT+GGG - Chr3:98049610-98049629 None:intergenic 25.0%
! ACCAAGGCATAATAATAAAA+TGG - Chr3:98048925-98048944 None:intergenic 25.0%
! AGAATAAAAGTTGAAGTACA+TGG + Chr3:98046981-98047000 MsG0380017578.01.T01:intron 25.0%
! ATATTAAGAACGTTCAATGT+GGG + Chr3:98045753-98045772 MsG0380017578.01.T01:intron 25.0%
! ATGGATAAAGGAATAGTTTA+GGG + Chr3:98044073-98044092 MsG0380017578.01.T01:intron 25.0%
! ATGTTAAAATTGCTAAATGC+TGG - Chr3:98043755-98043774 None:intergenic 25.0%
! ATTAACCATAATCCATCATA+AGG - Chr3:98043199-98043218 None:intergenic 25.0%
! ATTAGAATGCAAACATATGA+TGG + Chr3:98046246-98046265 MsG0380017578.01.T01:intron 25.0%
! ATTGACAATGATATTCATTG+TGG + Chr3:98047314-98047333 MsG0380017578.01.T01:intron 25.0%
! ATTGATATGAACAAAGAAAC+GGG + Chr3:98042737-98042756 MsG0380017578.01.T01:CDS 25.0%
! ATTTCACACAAAATCTGTTA+GGG + Chr3:98048404-98048423 MsG0380017578.01.T01:intron 25.0%
! CACAATATGAACATATATTG+AGG + Chr3:98046114-98046133 MsG0380017578.01.T01:intron 25.0%
! CATGAGAATTCCATTAATTA+AGG + Chr3:98044776-98044795 MsG0380017578.01.T01:intron 25.0%
! CTAATGTTGCATAAGAAAAT+TGG + Chr3:98047031-98047050 MsG0380017578.01.T01:intron 25.0%
! CTCAATATATGTTCATATTG+TGG - Chr3:98046116-98046135 None:intergenic 25.0%
! CTTGTACATATTTGTAGAAA+AGG - Chr3:98046028-98046047 None:intergenic 25.0%
! GATTCTTATAAATAGAGGAA+AGG + Chr3:98044899-98044918 MsG0380017578.01.T01:intron 25.0%
! TACACAACAACATATATTTC+AGG - Chr3:98050579-98050598 None:intergenic 25.0%
! TACATTGTTATATCCTCATA+TGG - Chr3:98049611-98049630 None:intergenic 25.0%
! TCAACAAAAAAAAAAAGAGC+CGG - Chr3:98047956-98047975 None:intergenic 25.0%
! TCTATCTGACTAATATCATT+AGG - Chr3:98044999-98045018 None:intergenic 25.0%
! TGATTAGGTTTATTAGACAA+TGG + Chr3:98048666-98048685 MsG0380017578.01.T01:intron 25.0%
! TGTTTGGTAAAGATACTAAA+AGG - Chr3:98046586-98046605 None:intergenic 25.0%
! TTACACAAAAATGTAAGATG+AGG - Chr3:98049650-98049669 None:intergenic 25.0%
!! AGAGATTTTACAACTTTGAA+TGG - Chr3:98045921-98045940 None:intergenic 25.0%
!! ATAACTATTTTCTTCTTAGG+CGG + Chr3:98048708-98048727 MsG0380017578.01.T01:intron 25.0%
!! ATCAAAATATGTGAAGTATC+AGG + Chr3:98043480-98043499 MsG0380017578.01.T01:intron 25.0%
!! CTGTTAGGGTTAAATTTTTA+GGG + Chr3:98048418-98048437 MsG0380017578.01.T01:intron 25.0%
!! GGTTATCTTAAACGAAATTT+TGG + Chr3:98047151-98047170 MsG0380017578.01.T01:intron 25.0%
!! TCAAAATATGTGAAGTATCA+GGG + Chr3:98043481-98043500 MsG0380017578.01.T01:intron 25.0%
!! TCCATTTTATTATTATGCCT+TGG + Chr3:98048921-98048940 MsG0380017578.01.T01:intron 25.0%
!! TCTGTTAGGGTTAAATTTTT+AGG + Chr3:98048417-98048436 MsG0380017578.01.T01:intron 25.0%
!! TTTTCTTTTACTTCCTTTCA+TGG - Chr3:98043798-98043817 None:intergenic 25.0%
!!! AATTTTGAGAGTTAATTCTC+CGG - Chr3:98049082-98049101 None:intergenic 25.0%
!!! CTTCACATATTTTGATTGTT+TGG - Chr3:98043476-98043495 None:intergenic 25.0%
!!! GTTGATTTTCAATATGATTC+CGG + Chr3:98047934-98047953 MsG0380017578.01.T01:intron 25.0%
!!! TACTGGGCTATAATTTTTTT+TGG + Chr3:98043894-98043913 MsG0380017578.01.T01:intron 25.0%
!!! TGTTTTAGTGAAAATAGATG+TGG + Chr3:98048744-98048763 MsG0380017578.01.T01:intron 25.0%
!!! TTGTCAGTTTTTAGTTTCAA+AGG + Chr3:98049225-98049244 MsG0380017578.01.T01:intron 25.0%
!!! TTTAATGCATTCTAGTTTTC+TGG + Chr3:98043242-98043261 MsG0380017578.01.T01:intron 25.0%
!!! TTTTTTGTTGAGAATGATTG+TGG + Chr3:98047965-98047984 MsG0380017578.01.T01:intron 25.0%
AAAATTAAGACTTGTCAACG+AGG + Chr3:98047900-98047919 MsG0380017578.01.T01:intron 30.0%
AAAGATAACTATGTAAGGCA+TGG - Chr3:98048612-98048631 None:intergenic 30.0%
AAATGTGTCTGTGAACAATT+GGG - Chr3:98050777-98050796 None:intergenic 30.0%
AACTAAAACTAGTATTGTGG+TGG - Chr3:98049558-98049577 None:intergenic 30.0%
AAGCAGTTTCGAAAAACTTA+AGG - Chr3:98050723-98050742 None:intergenic 30.0%
AAGTTAGATCTATACTTCAC+AGG - Chr3:98043980-98043999 None:intergenic 30.0%
AATTGAAGAATTCACTCTTG+TGG - Chr3:98049207-98049226 None:intergenic 30.0%
ACCAATTCGAATAACAATAG+GGG + Chr3:98049518-98049537 MsG0380017578.01.T01:intron 30.0%
AGATAAATAAGTGGTGTAAG+TGG - Chr3:98045211-98045230 None:intergenic 30.0%
AGATATCAAAGGGAAAAGAA+AGG - Chr3:98044751-98044770 None:intergenic 30.0%
AGCAGTTTCGAAAAACTTAA+GGG - Chr3:98050722-98050741 None:intergenic 30.0%
AGTGAAAATAGATGTGGTTT+GGG + Chr3:98048750-98048769 MsG0380017578.01.T01:intron 30.0%
AGTTAGATCTATACTTCACA+GGG - Chr3:98043979-98043998 None:intergenic 30.0%
ATAAGTAACTCACCTTATTG+CGG - Chr3:98046698-98046717 None:intergenic 30.0%
ATCAAGTACACGATAAAGAA+TGG - Chr3:98049913-98049932 None:intergenic 30.0%
CAAAAACTGCAAAGATTGTA+AGG + Chr3:98050078-98050097 MsG0380017578.01.T01:intron 30.0%
GAAATAGAAGTTCCAATGAA+GGG - Chr3:98048575-98048594 None:intergenic 30.0%
GAAATGAAAATCACGAGTAT+AGG - Chr3:98043387-98043406 None:intergenic 30.0%
GAATCAGAAACACTAAATGA+AGG - Chr3:98045687-98045706 None:intergenic 30.0%
GACCAATTCGAATAACAATA+GGG + Chr3:98049517-98049536 MsG0380017578.01.T01:intron 30.0%
GATGGATAAAGGAATAGTTT+AGG + Chr3:98044072-98044091 MsG0380017578.01.T01:intron 30.0%
GATTTCACACAAAATCTGTT+AGG + Chr3:98048403-98048422 MsG0380017578.01.T01:intron 30.0%
GATTTCACTGTGTAAAGAAA+TGG + Chr3:98050147-98050166 MsG0380017578.01.T01:intron 30.0%
GTCGTTTATCAATCAAGTTT+CGG - Chr3:98046828-98046847 None:intergenic 30.0%
TAACATGATAGTTGTTTGCT+TGG + Chr3:98044657-98044676 MsG0380017578.01.T01:intron 30.0%
TAAGATAACCACTTGCATAT+TGG - Chr3:98047141-98047160 None:intergenic 30.0%
TACAACAGTCCCTTAATTAA+TGG - Chr3:98044789-98044808 None:intergenic 30.0%
TAGTGAAAATAGATGTGGTT+TGG + Chr3:98048749-98048768 MsG0380017578.01.T01:intron 30.0%
TATCGCAATGTGTATAACAT+TGG - Chr3:98049442-98049461 None:intergenic 30.0%
TATGCAACATTAGCAACAAA+GGG - Chr3:98047024-98047043 None:intergenic 30.0%
TATGTAACTTTCGTAGTCAT+GGG + Chr3:98044680-98044699 MsG0380017578.01.T01:intron 30.0%
TATGTTGTTGTGTAAGATCA+TGG + Chr3:98050585-98050604 MsG0380017578.01.T01:CDS 30.0%
TATTCATACACAACACCAAA+AGG + Chr3:98046715-98046734 MsG0380017578.01.T01:intron 30.0%
TGAAATAGAAGTTCCAATGA+AGG - Chr3:98048576-98048595 None:intergenic 30.0%
TGACCAATTCGAATAACAAT+AGG + Chr3:98049516-98049535 MsG0380017578.01.T01:intron 30.0%
TGAGAACACAATCATTGAAT+GGG - Chr3:98045661-98045680 None:intergenic 30.0%
TGCTTATATGTATGAAACTG+AGG + Chr3:98043006-98043025 MsG0380017578.01.T01:intron 30.0%
TGGCAAGAAACAGATAAATA+AGG - Chr3:98045604-98045623 None:intergenic 30.0%
TTACACCACTTATTTATCTG+AGG + Chr3:98045212-98045231 MsG0380017578.01.T01:intron 30.0%
TTAGGAATCAAGGAGAAAAA+GGG - Chr3:98050056-98050075 None:intergenic 30.0%
TTATGCAACATTAGCAACAA+AGG - Chr3:98047025-98047044 None:intergenic 30.0%
TTTACTTCCTTTCATGGAAT+TGG - Chr3:98043792-98043811 None:intergenic 30.0%
! AATGTGGGTTGTCTTATATA+TGG + Chr3:98045768-98045787 MsG0380017578.01.T01:intron 30.0%
! ATAGTATTGAAGCTGTGTTA+TGG + Chr3:98048538-98048557 MsG0380017578.01.T01:intron 30.0%
! ATTCCAACTACACTGTATTT+TGG + Chr3:98049099-98049118 MsG0380017578.01.T01:intron 30.0%
! TAGTTTAGGGACCTTTTAAT+AGG + Chr3:98044086-98044105 MsG0380017578.01.T01:intron 30.0%
! TTCCAACTACACTGTATTTT+GGG + Chr3:98049100-98049119 MsG0380017578.01.T01:intron 30.0%
! TTGCTAAATTGGCTGATTTA+TGG - Chr3:98043664-98043683 None:intergenic 30.0%
! TTTCTTTTCCCTTTGATATC+TGG + Chr3:98044750-98044769 MsG0380017578.01.T01:intron 30.0%
!! TAATGCCTTATGATGGATTA+TGG + Chr3:98043191-98043210 MsG0380017578.01.T01:intron 30.0%
!! TGATGGGTTATGTTATTACA+TGG + Chr3:98045990-98046009 MsG0380017578.01.T01:intron 30.0%
!! TGGCTTTGTTTATATTGTGA+TGG + Chr3:98044537-98044556 MsG0380017578.01.T01:intron 30.0%
!! TTTAAATACGAGGAGTGTTA+TGG - Chr3:98047078-98047097 None:intergenic 30.0%
!!! TGGGCTATAATTTTTTTTGG+AGG + Chr3:98043897-98043916 MsG0380017578.01.T01:intron 30.0%
AAATCACGAGTATAGGAACA+TGG - Chr3:98043380-98043399 None:intergenic 35.0%
AAATCAGCCAATTCCATGAA+AGG + Chr3:98043782-98043801 MsG0380017578.01.T01:intron 35.0%
AACATAACCCATCAAGAGAA+AGG - Chr3:98045984-98046003 None:intergenic 35.0%
AACCAGTCTGCTAATAACAT+TGG - Chr3:98045030-98045049 None:intergenic 35.0%
AAGCTGTGTTATGGAATACA+AGG + Chr3:98048547-98048566 MsG0380017578.01.T01:intron 35.0%
AAGGTCAGTAAGATTTGTGA+TGG - Chr3:98049979-98049998 None:intergenic 35.0%
AATGCATCATAGAAAAGCAG+AGG - Chr3:98049297-98049316 None:intergenic 35.0%
ACTCAGTTGCTAAAATACCA+GGG + Chr3:98050110-98050129 MsG0380017578.01.T01:intron 35.0%
ACTGTAAGAGAGCTTAGTTA+AGG + Chr3:98044476-98044495 MsG0380017578.01.T01:intron 35.0%
AGGAAGATAAGATGTAGACA+TGG - Chr3:98049832-98049851 None:intergenic 35.0%
ATAAGCACATTCTTCACAAG+TGG + Chr3:98043419-98043438 MsG0380017578.01.T01:intron 35.0%
ATACACAACACCAAAAGGTA+AGG + Chr3:98046720-98046739 MsG0380017578.01.T01:intron 35.0%
ATCTGCCTCAGATAAATAAG+TGG - Chr3:98045220-98045239 None:intergenic 35.0%
ATGCATCATAGAAAAGCAGA+GGG - Chr3:98049296-98049315 None:intergenic 35.0%
ATTAGCCCAGTTCAAAAACA+GGG + Chr3:98045443-98045462 MsG0380017578.01.T01:intron 35.0%
ATTCGAATAACAATAGGGGA+TGG + Chr3:98049522-98049541 MsG0380017578.01.T01:intron 35.0%
ATTTGTTTGCCTATCTATCG+TGG - Chr3:98045282-98045301 None:intergenic 35.0%
CAAACAAATTGGCATGTTTG+TGG + Chr3:98045293-98045312 MsG0380017578.01.T01:CDS 35.0%
CAACAAAGGGATCACTAAAA+TGG - Chr3:98047011-98047030 None:intergenic 35.0%
CAACGATAAACAAAGCCAAA+AGG + Chr3:98042682-98042701 MsG0380017578.01.T01:CDS 35.0%
CAATGTAAAACCCATTCAGT+TGG + Chr3:98049624-98049643 MsG0380017578.01.T01:intron 35.0%
CATGTATGTAGCTAAAATCG+TGG + Chr3:98045244-98045263 MsG0380017578.01.T01:CDS 35.0%
CATGTGTGTATATGATGACA+CGG + Chr3:98045110-98045129 MsG0380017578.01.T01:intron 35.0%
CGATAGATAGGCAAACAAAT+TGG + Chr3:98045282-98045301 MsG0380017578.01.T01:CDS 35.0%
CTCAAATCTACCTAATTCTG+AGG + Chr3:98046646-98046665 MsG0380017578.01.T01:intron 35.0%
CTCATTAAGAAACCTTCCAA+AGG + Chr3:98050363-98050382 MsG0380017578.01.T01:CDS 35.0%
CTGTAAGAGAGCTTAGTTAA+GGG + Chr3:98044477-98044496 MsG0380017578.01.T01:intron 35.0%
CTGTCCCAAACACAAATAAA+AGG - Chr3:98044431-98044450 None:intergenic 35.0%
CTTACTAGCATTAAACTGAG+AGG + Chr3:98048811-98048830 MsG0380017578.01.T01:intron 35.0%
CTTAGGAATCAAGGAGAAAA+AGG - Chr3:98050057-98050076 None:intergenic 35.0%
GAAATGTGTCTGTGAACAAT+TGG - Chr3:98050778-98050797 None:intergenic 35.0%
GATAGTGTTAATTGTCACGT+TGG - Chr3:98044020-98044039 None:intergenic 35.0%
GATCTAACTTAGTAGACAGA+TGG + Chr3:98043990-98044009 MsG0380017578.01.T01:intron 35.0%
GCTGTTCTTGTGAAACTTTA+GGG + Chr3:98043449-98043468 MsG0380017578.01.T01:intron 35.0%
GTATGTAACTTTCGTAGTCA+TGG + Chr3:98044679-98044698 MsG0380017578.01.T01:intron 35.0%
GTGAGAACACAATCATTGAA+TGG - Chr3:98045662-98045681 None:intergenic 35.0%
GTTTATCAATCAAGTTTCGG+CGG - Chr3:98046825-98046844 None:intergenic 35.0%
TAGAGACCATTTCCAATGTT+GGG + Chr3:98051028-98051047 MsG0380017578.01.T01:CDS 35.0%
TAGGACCTAATTTAGAGAGA+GGG + Chr3:98044120-98044139 MsG0380017578.01.T01:intron 35.0%
TCATGAGACCAGATATCAAA+GGG - Chr3:98044761-98044780 None:intergenic 35.0%
TCATTTCTCCAATATGCAAG+TGG + Chr3:98047130-98047149 MsG0380017578.01.T01:intron 35.0%
TCCGTGAGAAAATTTCGAAA+CGG + Chr3:98046775-98046794 MsG0380017578.01.T01:intron 35.0%
TGAAGCTGTTGAGAAAACTA+TGG + Chr3:98046213-98046232 MsG0380017578.01.T01:intron 35.0%
TGCTGTTCTTGTGAAACTTT+AGG + Chr3:98043448-98043467 MsG0380017578.01.T01:intron 35.0%
TGGTTGACAGTCTTTATGTT+AGG + Chr3:98051055-98051074 MsG0380017578.01.T01:CDS 35.0%
TGTAAGAGAGCTTAGTTAAG+GGG + Chr3:98044478-98044497 MsG0380017578.01.T01:intron 35.0%
TGTAGAAAAGGCTACATTAC+AGG - Chr3:98046016-98046035 None:intergenic 35.0%
TGTATGTTTCCACGATAGAT+AGG + Chr3:98045270-98045289 MsG0380017578.01.T01:CDS 35.0%
TTAGAAATGGGTAACTACTC+AGG + Chr3:98045889-98045908 MsG0380017578.01.T01:intron 35.0%
TTAGAGACCATTTCCAATGT+TGG + Chr3:98051027-98051046 MsG0380017578.01.T01:CDS 35.0%
TTAGGACCTAATTTAGAGAG+AGG + Chr3:98044119-98044138 MsG0380017578.01.T01:intron 35.0%
TTCAAAGAGATACTGCTTTC+TGG - Chr3:98049691-98049710 None:intergenic 35.0%
TTCAATGCCTCACTTAATGT+TGG - Chr3:98046624-98046643 None:intergenic 35.0%
TTCGAAAGGAATTGCCAATT+GGG - Chr3:98048183-98048202 None:intergenic 35.0%
TTCGAATAACAATAGGGGAT+GGG + Chr3:98049523-98049542 MsG0380017578.01.T01:intron 35.0%
TTGAACTGGGCTAATCATTT+GGG - Chr3:98045438-98045457 None:intergenic 35.0%
TTTGAACTGGGCTAATCATT+TGG - Chr3:98045439-98045458 None:intergenic 35.0%
! AAGCTTTGACTCTTCTTTCT+GGG + Chr3:98050263-98050282 MsG0380017578.01.T01:CDS 35.0%
! AATGCAAACATATGATGGTG+AGG + Chr3:98046251-98046270 MsG0380017578.01.T01:intron 35.0%
! AGTTTTTGCCTTAGGAATCA+AGG - Chr3:98050066-98050085 None:intergenic 35.0%
! ATCTTTGCAGTTTTTGCCTT+AGG - Chr3:98050074-98050093 None:intergenic 35.0%
! ATTTTGGACAAGAAGTTTGC+TGG + Chr3:98050931-98050950 MsG0380017578.01.T01:CDS 35.0%
! CATCATAAGGCATTAAGTCA+GGG - Chr3:98043186-98043205 None:intergenic 35.0%
! CTTCTTCTTCTTCTTCCTTT+TGG - Chr3:98042700-98042719 None:intergenic 35.0%
! CTTTTTCTCCTTGATTCCTA+AGG + Chr3:98050055-98050074 MsG0380017578.01.T01:CDS 35.0%
! GAAGATGTCTCAGATGATTT+TGG + Chr3:98050915-98050934 MsG0380017578.01.T01:CDS 35.0%
! GAAGTATCCGTGAGAAAATA+TGG - Chr3:98046916-98046935 None:intergenic 35.0%
! GGGTGGAATTATTTCTTCTA+AGG + Chr3:98050627-98050646 MsG0380017578.01.T01:CDS 35.0%
! GTTCTTTTCAACAAAGTCAC+AGG - Chr3:98049027-98049046 None:intergenic 35.0%
! TATGTTGTTTAGGTGAAGAG+TGG + Chr3:98044708-98044727 MsG0380017578.01.T01:intron 35.0%
! TATTCCACTCTGAAGATCTA+TGG - Chr3:98050458-98050477 None:intergenic 35.0%
! TCCAACTACACTGTATTTTG+GGG + Chr3:98049101-98049120 MsG0380017578.01.T01:intron 35.0%
! TCCCCTATTGTTATTCGAAT+TGG - Chr3:98049522-98049541 None:intergenic 35.0%
! TCCGTTTCGAAATTTTCTCA+CGG - Chr3:98046779-98046798 None:intergenic 35.0%
! TTTACTGGCTATGATTCTTG+AGG + Chr3:98043074-98043093 MsG0380017578.01.T01:intron 35.0%
!! AAATGGTCTCTAAAGTTGCA+GGG - Chr3:98051020-98051039 None:intergenic 35.0%
!! AAGAGCATTGAAAGACTCAA+AGG - Chr3:98050533-98050552 None:intergenic 35.0%
!! GAACAAGATTGATTTGTTCG+AGG - Chr3:98048333-98048352 None:intergenic 35.0%
!! GGAATTATTTCTTCTAAGGC+AGG + Chr3:98050631-98050650 MsG0380017578.01.T01:CDS 35.0%
!! TTTTGGACAAGAAGTTTGCT+GGG + Chr3:98050932-98050951 MsG0380017578.01.T01:CDS 35.0%
!!! ATGTCAGTGTTGTTTTGGAA+AGG + Chr3:98043591-98043610 MsG0380017578.01.T01:intron 35.0%
!!! CACGATTTTAGCTACATACA+TGG - Chr3:98045246-98045265 None:intergenic 35.0%
!!! GAACAATGTCAGTGTTGTTT+TGG + Chr3:98043586-98043605 MsG0380017578.01.T01:intron 35.0%
!!! GTCGATGATCTTTTGTTGTT+TGG - Chr3:98046602-98046621 None:intergenic 35.0%
!!! TGTCAGTGTTGTTTTGGAAA+GGG + Chr3:98043592-98043611 MsG0380017578.01.T01:intron 35.0%
!!! TTTTTTTTAGTGGGGGTACT+GGG + Chr3:98043878-98043897 MsG0380017578.01.T01:intron 35.0%
!!! TTTTTTTTTAGTGGGGGTAC+TGG + Chr3:98043877-98043896 MsG0380017578.01.T01:intron 35.0%
AACCACACAGAAATAAGCAC+AGG - Chr3:98044927-98044946 None:intergenic 40.0%
AAGGCAGGATTGCAATATGT+TGG + Chr3:98050646-98050665 MsG0380017578.01.T01:CDS 40.0%
AATACTTCATGCTGAGGAGA+AGG + Chr3:98050474-98050493 MsG0380017578.01.T01:CDS 40.0%
ACAAAGATTCTGCTCCAGAA+GGG - Chr3:98050815-98050834 None:intergenic 40.0%
ACAAATGAAGCCTCCACTAA+CGG + Chr3:98045503-98045522 MsG0380017578.01.T01:intron 40.0%
ACAAGCAATCAATCAAGCAG+TGG - Chr3:98045085-98045104 None:intergenic 40.0%
ACCTAATTTAGAGAGAGGGA+GGG + Chr3:98044124-98044143 MsG0380017578.01.T01:intron 40.0%
ACTAGCAGCTTCTACATTAC+AGG - Chr3:98049770-98049789 None:intergenic 40.0%
AGAATCACTGCATCTTCTCT+TGG + Chr3:98042975-98042994 MsG0380017578.01.T01:intron 40.0%
AGAATGGATATCGCATCAGA+AGG - Chr3:98049897-98049916 None:intergenic 40.0%
AGGCAGGATTGCAATATGTT+GGG + Chr3:98050647-98050666 MsG0380017578.01.T01:CDS 40.0%
AGGGTATATTGCATCAGTCT+TGG - Chr3:98051001-98051020 None:intergenic 40.0%
ATCTCTGTGTTTGTTCTCTC+TGG + Chr3:98045825-98045844 MsG0380017578.01.T01:intron 40.0%
ATCTTATCTTCCTGCCACAA+CGG + Chr3:98049839-98049858 MsG0380017578.01.T01:CDS 40.0%
ATGATTGAGGGACGAAATTG+AGG - Chr3:98043146-98043165 None:intergenic 40.0%
ATTCCCCAAAAGAGCTTTCA+TGG - Chr3:98049405-98049424 None:intergenic 40.0%
CAAATCTTACTGACCTTCTC+AGG + Chr3:98049982-98050001 MsG0380017578.01.T01:CDS 40.0%
CACCAATGTTATTAGCAGAC+TGG + Chr3:98045025-98045044 MsG0380017578.01.T01:intron 40.0%
CACTTTCCCAACATTGGAAA+TGG - Chr3:98051037-98051056 None:intergenic 40.0%
CATATTGGAGAAATGACGAG+AGG - Chr3:98047126-98047145 None:intergenic 40.0%
CATCTTGCGATATGTAAGCA+TGG + Chr3:98045796-98045815 MsG0380017578.01.T01:intron 40.0%
CATTTCCAATGTTGGGAAAG+TGG + Chr3:98051035-98051054 MsG0380017578.01.T01:CDS 40.0%
CCTGACTTAATGCCTTATGA+TGG + Chr3:98043184-98043203 MsG0380017578.01.T01:intron 40.0%
CGAACTGAACTCAAATTTCC+AGG + Chr3:98048243-98048262 MsG0380017578.01.T01:intron 40.0%
CTCATGAGACCAGATATCAA+AGG - Chr3:98044762-98044781 None:intergenic 40.0%
CTTCGAAAGGAATTGCCAAT+TGG - Chr3:98048184-98048203 None:intergenic 40.0%
GAATACAAGGATCCCTTCAT+TGG + Chr3:98048560-98048579 MsG0380017578.01.T01:intron 40.0%
GAATGGATATCGCATCAGAA+GGG - Chr3:98049896-98049915 None:intergenic 40.0%
GACTCAGTTGCTAAAATACC+AGG + Chr3:98050109-98050128 MsG0380017578.01.T01:intron 40.0%
GCAATCTCAACTCTTGAGAA+TGG - Chr3:98050850-98050869 None:intergenic 40.0%
GGGTATATTGCATCAGTCTT+GGG - Chr3:98051000-98051019 None:intergenic 40.0%
GTAAGAGAGCTTAGTTAAGG+GGG + Chr3:98044479-98044498 MsG0380017578.01.T01:intron 40.0%
GTATCCGTGAGAAAATATGG+TGG - Chr3:98046913-98046932 None:intergenic 40.0%
GTGTGAGTGAATGATGTTGA+TGG + Chr3:98044851-98044870 MsG0380017578.01.T01:intron 40.0%
TAAGAGAGCTTAGTTAAGGG+GGG + Chr3:98044480-98044499 MsG0380017578.01.T01:intron 40.0%
TAAGATGAGGCCAACTGAAT+GGG - Chr3:98049637-98049656 None:intergenic 40.0%
TACAAAGATTCTGCTCCAGA+AGG - Chr3:98050816-98050835 None:intergenic 40.0%
TACCAGAACACAATCATCGA+AGG - Chr3:98045709-98045728 None:intergenic 40.0%
TATGAACAAAGAAACGGGTG+AGG + Chr3:98042742-98042761 MsG0380017578.01.T01:CDS 40.0%
TCAACAATGTCTGCTTCCAT+TGG + Chr3:98048858-98048877 MsG0380017578.01.T01:intron 40.0%
TCATCGACCAACATTAAGTG+AGG + Chr3:98046614-98046633 MsG0380017578.01.T01:intron 40.0%
TCGAACAATAACAGAGAGGA+AGG + Chr3:98046379-98046398 MsG0380017578.01.T01:intron 40.0%
TCTACAATCTACAGACACCA+AGG - Chr3:98048941-98048960 None:intergenic 40.0%
TCTCTGTGTTTGTTCTCTCT+GGG + Chr3:98045826-98045845 MsG0380017578.01.T01:intron 40.0%
TCTGGAGAAAGGGAGAAAAT+TGG - Chr3:98049673-98049692 None:intergenic 40.0%
TGATTGAGGGACGAAATTGA+GGG - Chr3:98043145-98043164 None:intergenic 40.0%
TGGGATCATCGAATATAACG+AGG - Chr3:98050981-98051000 None:intergenic 40.0%
TGTGTAAAGAAATGGTGCAG+TGG + Chr3:98050155-98050174 MsG0380017578.01.T01:CDS 40.0%
TGTTAGGTCTGCTAAGATCA+TGG + Chr3:98051071-98051090 MsG0380017578.01.T01:CDS 40.0%
TGTTATTGTTCGACGCTCTA+GGG - Chr3:98046372-98046391 None:intergenic 40.0%
TTAGCCCAGTTCAAAAACAG+GGG + Chr3:98045444-98045463 MsG0380017578.01.T01:intron 40.0%
TTCAGGCTGAAAATAGCCTT+AGG - Chr3:98050562-98050581 None:intergenic 40.0%
TTCCAATTGTTCACGTTGAG+CGG + Chr3:98050893-98050912 MsG0380017578.01.T01:CDS 40.0%
TTCCTTCGATGATTGTGTTC+TGG + Chr3:98045704-98045723 MsG0380017578.01.T01:intron 40.0%
TTCTCACGGATACTTCTGAT+AGG + Chr3:98046920-98046939 MsG0380017578.01.T01:intron 40.0%
TTGCTAATCTTATGCTCTGC+AGG + Chr3:98045050-98045069 MsG0380017578.01.T01:intron 40.0%
TTTGACTCTTCTTTCTGGGT+TGG + Chr3:98050267-98050286 MsG0380017578.01.T01:CDS 40.0%
TTTGGGTCCTTTCTCTTGAT+GGG + Chr3:98045974-98045993 MsG0380017578.01.T01:intron 40.0%
! AACAATGATGGTGAGAGGAA+TGG + Chr3:98043822-98043841 MsG0380017578.01.T01:intron 40.0%
! AACGAAACAATGATGGTGAG+AGG + Chr3:98043817-98043836 MsG0380017578.01.T01:intron 40.0%
! AATCTCTGTCACTTGTTAGC+CGG - Chr3:98045386-98045405 None:intergenic 40.0%
! AGAATGGGTTCCTCAGAATT+AGG - Chr3:98046659-98046678 None:intergenic 40.0%
! AGATACTGCTTTCTGGAGAA+AGG - Chr3:98049684-98049703 None:intergenic 40.0%
! AGCGCTTTTGATGGAAACTA+AGG + Chr3:98050231-98050250 MsG0380017578.01.T01:CDS 40.0%
! ATCGAATATAACGAGGCATC+CGG - Chr3:98050974-98050993 None:intergenic 40.0%
! ATGCCATGAAAGCTCTTTTG+GGG + Chr3:98049399-98049418 MsG0380017578.01.T01:intron 40.0%
! ATGGGTGGCATATGTTGTTT+AGG + Chr3:98044698-98044717 MsG0380017578.01.T01:intron 40.0%
! ATTGTTTTCATCGCCGTTAG+TGG - Chr3:98045519-98045538 None:intergenic 40.0%
! CATGCCATGAAAGCTCTTTT+GGG + Chr3:98049398-98049417 MsG0380017578.01.T01:intron 40.0%
! CCATCATAAGGCATTAAGTC+AGG - Chr3:98043187-98043206 None:intergenic 40.0%
! GAAATTTTCTCACGGAAGAG+AGG - Chr3:98046771-98046790 None:intergenic 40.0%
! GAAGCTTTGACTCTTCTTTC+TGG + Chr3:98050262-98050281 MsG0380017578.01.T01:CDS 40.0%
! GATACTGCTTTCTGGAGAAA+GGG - Chr3:98049683-98049702 None:intergenic 40.0%
! GATTAGCCCAGTTCAAAAAC+AGG + Chr3:98045442-98045461 MsG0380017578.01.T01:intron 40.0%
! GGTTTGGGACTTAGATTAGA+TGG + Chr3:98048765-98048784 MsG0380017578.01.T01:intron 40.0%
! GTTGCATTTGTTTCTCACTC+TGG + Chr3:98046164-98046183 MsG0380017578.01.T01:intron 40.0%
! TCAGGCTGAAAATAGCCTTA+GGG - Chr3:98050561-98050580 None:intergenic 40.0%
!! AGAACTGATTTGTTTGCAGC+TGG - Chr3:98045624-98045643 None:intergenic 40.0%
!! CAACTACACTGTATTTTGGG+GGG + Chr3:98049103-98049122 MsG0380017578.01.T01:intron 40.0%
!! CCAACTACACTGTATTTTGG+GGG + Chr3:98049102-98049121 MsG0380017578.01.T01:intron 40.0%
!! CTGAAAAGCGTACTTTTCTG+AGG + Chr3:98050185-98050204 MsG0380017578.01.T01:CDS 40.0%
!! GAAATGGTCTCTAAAGTTGC+AGG - Chr3:98051021-98051040 None:intergenic 40.0%
!! GTTTAAGCACTGCTAGTCTT+TGG - Chr3:98049181-98049200 None:intergenic 40.0%
!! GTTTTTCGAAACTGCTTTGC+AGG + Chr3:98050726-98050745 MsG0380017578.01.T01:CDS 40.0%
!! TATCCTCATATGGGTTAGAC+AGG - Chr3:98049601-98049620 None:intergenic 40.0%
!! TCATGAACATGCTGCTTTGA+GGG - Chr3:98046196-98046215 None:intergenic 40.0%
!! TGAGGATTGGTTTGCATTGT+TGG - Chr3:98045552-98045571 None:intergenic 40.0%
!! TGTGCTTATTTCTGTGTGGT+TGG + Chr3:98044926-98044945 MsG0380017578.01.T01:intron 40.0%
!! TTCATGAACATGCTGCTTTG+AGG - Chr3:98046197-98046216 None:intergenic 40.0%
!! TTCTGGAGCAGAATCTTTGT+AGG + Chr3:98050815-98050834 MsG0380017578.01.T01:CDS 40.0%
!! TTTTGGGTCCTTTCTCTTGA+TGG + Chr3:98045973-98045992 MsG0380017578.01.T01:intron 40.0%
!!! AGAAACCCCTGTTTTTGAAC+TGG - Chr3:98045452-98045471 None:intergenic 40.0%
!!! GAAACCCCTGTTTTTGAACT+GGG - Chr3:98045451-98045470 None:intergenic 40.0%
!!! GTCAGTGTTGTTTTGGAAAG+GGG + Chr3:98043593-98043612 MsG0380017578.01.T01:intron 40.0%
!!! TTTTCTGAGGCAACGAATTG+AGG + Chr3:98050198-98050217 MsG0380017578.01.T01:CDS 40.0%
AACAAAGAAACGGGTGAGGT+AGG + Chr3:98042746-98042765 MsG0380017578.01.T01:CDS 45.0%
AACAGAACGAGTCAGGTGTT+CGG - Chr3:98042561-98042580 None:intergenic 45.0%
AACTGCTTTGCAGGACTACA+AGG + Chr3:98050735-98050754 MsG0380017578.01.T01:CDS 45.0%
AATTTAGAGAGAGGGAGGGA+GGG + Chr3:98044128-98044147 MsG0380017578.01.T01:intron 45.0%
ACCAAAAGGTAAGGAGATGC+AGG + Chr3:98046729-98046748 MsG0380017578.01.T01:intron 45.0%
AGAGCTTCTGGTGAAGAAGA+TGG - Chr3:98049939-98049958 None:intergenic 45.0%
AGATCTATACTTCACAGGGC+CGG - Chr3:98043975-98043994 None:intergenic 45.0%
AGCCTCCATATTCGTAGGAA+CGG - Chr3:98043507-98043526 None:intergenic 45.0%
AGTAACTCACCTTATTGCGG+AGG - Chr3:98046695-98046714 None:intergenic 45.0%
AGTTGGAAACAGAACGAGTC+AGG - Chr3:98042568-98042587 None:intergenic 45.0%
ATAGGAACATGGTGCATGAG+TGG - Chr3:98043369-98043388 None:intergenic 45.0%
ATCCACTCTTCTCAGACTGA+CGG + Chr3:98044037-98044056 MsG0380017578.01.T01:intron 45.0%
ATCCCTGTATGATACCCTTC+TGG + Chr3:98050798-98050817 MsG0380017578.01.T01:CDS 45.0%
ATCTGTAGATCAGATGTCCC+TGG - Chr3:98050130-98050149 None:intergenic 45.0%
CAATGCTCTTGAAGACCCTA+AGG + Chr3:98050543-98050562 MsG0380017578.01.T01:CDS 45.0%
CCAAAAGAGCTTTCATGGCA+TGG - Chr3:98049400-98049419 None:intergenic 45.0%
CCAACGTACAAGCTTCAAAC+AGG + Chr3:98045576-98045595 MsG0380017578.01.T01:intron 45.0%
CCCCCAAAATACAGTGTAGT+TGG - Chr3:98049105-98049124 None:intergenic 45.0%
CTCTGTGTTTGTTCTCTCTG+GGG + Chr3:98045827-98045846 MsG0380017578.01.T01:intron 45.0%
CTGAGCAATTGAATCCGTTG+TGG - Chr3:98049856-98049875 None:intergenic 45.0%
CTGCAACACCATTCTACCAA+TGG - Chr3:98048877-98048896 None:intergenic 45.0%
CTGTTATTGTTCGACGCTCT+AGG - Chr3:98046373-98046392 None:intergenic 45.0%
GAAACTGAGGTTGAGTGAAG+TGG + Chr3:98043019-98043038 MsG0380017578.01.T01:intron 45.0%
GACCTAATTTAGAGAGAGGG+AGG + Chr3:98044123-98044142 MsG0380017578.01.T01:intron 45.0%
GAGTGGAATACTTCATGCTG+AGG + Chr3:98050468-98050487 MsG0380017578.01.T01:CDS 45.0%
GCTGTCAATGCAAGACAACA+TGG - Chr3:98049358-98049377 None:intergenic 45.0%
GGATTCAATTGCTCAGGCAT+TGG + Chr3:98049860-98049879 MsG0380017578.01.T01:CDS 45.0%
GGGACTAAGTGGATGGATAA+AGG + Chr3:98044061-98044080 MsG0380017578.01.T01:intron 45.0%
GTAACTTTCGTAGTCATGGG+TGG + Chr3:98044683-98044702 MsG0380017578.01.T01:intron 45.0%
GTAAGATGAGGCCAACTGAA+TGG - Chr3:98049638-98049657 None:intergenic 45.0%
GTCAACCACTTTCCCAACAT+TGG - Chr3:98051043-98051062 None:intergenic 45.0%
GTCTGCTTCCATTGGTAGAA+TGG + Chr3:98048866-98048885 MsG0380017578.01.T01:intron 45.0%
GTGTTTGTTCCTTCTCGTTG+TGG - Chr3:98042634-98042653 None:intergenic 45.0%
TAATTTAGAGAGAGGGAGGG+AGG + Chr3:98044127-98044146 MsG0380017578.01.T01:intron 45.0%
TAGGAACATGGTGCATGAGT+GGG - Chr3:98043368-98043387 None:intergenic 45.0%
TCCCTCCCTCTCTCTAAATT+AGG - Chr3:98044128-98044147 None:intergenic 45.0%
TCCGTGAGAAAATATGGTGG+AGG - Chr3:98046910-98046929 None:intergenic 45.0%
TCTTTCATACGCAGAGCTTC+TGG - Chr3:98049951-98049970 None:intergenic 45.0%
TTCAGTTCGACTCCCGTTTA+GGG - Chr3:98048232-98048251 None:intergenic 45.0%
TTCATGCCCAAGTTAGAACG+TGG + Chr3:98045357-98045376 MsG0380017578.01.T01:CDS 45.0%
TTCCGCTCAACGTGAACAAT+TGG - Chr3:98050898-98050917 None:intergenic 45.0%
TTCCTACGAATATGGAGGCT+CGG + Chr3:98043507-98043526 MsG0380017578.01.T01:intron 45.0%
TTCGAAACGGATGTGTGTTG+AGG + Chr3:98046788-98046807 MsG0380017578.01.T01:intron 45.0%
TTTGCTGGGACATTGGATCA+AGG + Chr3:98050946-98050965 MsG0380017578.01.T01:CDS 45.0%
! AAGACTTGCAGCGCTTTTGA+TGG + Chr3:98050222-98050241 MsG0380017578.01.T01:CDS 45.0%
! ACCTGGAATTTGAAAGCACG+TGG + Chr3:98044517-98044536 MsG0380017578.01.T01:intron 45.0%
! AGCGTCGAACAATAACAGAG+AGG + Chr3:98046375-98046394 MsG0380017578.01.T01:intron 45.0%
! AGGAAGTACAGGATGGAGAA+TGG - Chr3:98046675-98046694 None:intergenic 45.0%
! CACAACGGATTCAATTGCTC+AGG + Chr3:98049854-98049873 MsG0380017578.01.T01:CDS 45.0%
! CCATGCCATGAAAGCTCTTT+TGG + Chr3:98049397-98049416 MsG0380017578.01.T01:intron 45.0%
! CCCTCCACCATATTTTCTCA+CGG + Chr3:98046906-98046925 MsG0380017578.01.T01:intron 45.0%
! CCGTGAGAAAATATGGTGGA+GGG - Chr3:98046909-98046928 None:intergenic 45.0%
! CCTGTTTGAAGCTTGTACGT+TGG - Chr3:98045579-98045598 None:intergenic 45.0%
! GGAAGTACAGGATGGAGAAT+GGG - Chr3:98046674-98046693 None:intergenic 45.0%
! GGGAAGTGGTTTTCAATACC+TGG + Chr3:98044500-98044519 MsG0380017578.01.T01:intron 45.0%
! GTGAATCAAGCTGATGACGT+GGG + Chr3:98050607-98050626 MsG0380017578.01.T01:CDS 45.0%
! GTGTTTGGGACAGTTCAGTT+AGG + Chr3:98044438-98044457 MsG0380017578.01.T01:intron 45.0%
! TCCCAAAAGCACAACCCAAT+TGG + Chr3:98048166-98048185 MsG0380017578.01.T01:intron 45.0%
! TCCTGCATCTCCTTACCTTT+TGG - Chr3:98046733-98046752 None:intergenic 45.0%
!! CAAGAAGTTTGCTGGGACAT+TGG + Chr3:98050939-98050958 MsG0380017578.01.T01:CDS 45.0%
!! CTCCAGAAGGGTATCATACA+GGG - Chr3:98050803-98050822 None:intergenic 45.0%
!! GCCAATTGGGTTGTGCTTTT+GGG - Chr3:98048170-98048189 None:intergenic 45.0%
!! GGCTTTGTTTATCGTTGTCG+TGG - Chr3:98042679-98042698 None:intergenic 45.0%
!! GTAGAATGGTGTTGCAGCTT+CGG + Chr3:98048880-98048899 MsG0380017578.01.T01:intron 45.0%
!! GTCCTGTGCTTATTTCTGTG+TGG + Chr3:98044922-98044941 MsG0380017578.01.T01:intron 45.0%
!! GTTTGCATTGTTGGTGCTAG+AGG - Chr3:98045543-98045562 None:intergenic 45.0%
!! TCGGTGCTGGAATTGAAATG+AGG + Chr3:98043526-98043545 MsG0380017578.01.T01:intron 45.0%
!! TCTTTCTGGGTTGGTCAAAG+AGG + Chr3:98050276-98050295 MsG0380017578.01.T01:CDS 45.0%
!! TGCCAATTGGGTTGTGCTTT+TGG - Chr3:98048171-98048190 None:intergenic 45.0%
!! TTCAATTGCTCAGGCATTGG+AGG + Chr3:98049863-98049882 MsG0380017578.01.T01:CDS 45.0%
!! ATTATTAAAATCAATATTAT+TGG + Chr3:98048451-98048470 MsG0380017578.01.T01:intron 5.0%
!!! ATATATATATACTTTTAAAT+GGG - Chr3:98046480-98046499 None:intergenic 5.0%
!!! TATATATATATACTTTTAAA+TGG - Chr3:98046481-98046500 None:intergenic 5.0%
AAAGAAACGGGTGAGGTAGG+TGG + Chr3:98042749-98042768 MsG0380017578.01.T01:CDS 50.0%
AAAGGCAAAAGCTGCCCTCA+CGG + Chr3:98050381-98050400 MsG0380017578.01.T01:CDS 50.0%
AAGAAACGGGTGAGGTAGGT+GGG + Chr3:98042750-98042769 MsG0380017578.01.T01:CDS 50.0%
AAGCCAACCACAGTAAGCCA+AGG - Chr3:98044972-98044991 None:intergenic 50.0%
ACCTTCTCAGGCAAGAGAAC+AGG + Chr3:98049994-98050013 MsG0380017578.01.T01:CDS 50.0%
ACTCTTCTCAGACTGACGGA+GGG + Chr3:98044041-98044060 MsG0380017578.01.T01:intron 50.0%
ACTGAGGGTTCACTATCCCT+TGG + Chr3:98044952-98044971 MsG0380017578.01.T01:intron 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + Chr3:98044190-98044209 MsG0380017578.01.T01:intron 50.0%
AGCCAACCACAGTAAGCCAA+GGG - Chr3:98044971-98044990 None:intergenic 50.0%
AGCTCTGCGTATGAAAGAGC+AGG + Chr3:98049953-98049972 MsG0380017578.01.T01:CDS 50.0%
AGCTTAGTTAAGGGGGGAAG+TGG + Chr3:98044486-98044505 MsG0380017578.01.T01:intron 50.0%
AGCTTGTACGTTGGCACATG+AGG - Chr3:98045570-98045589 None:intergenic 50.0%
AGGACTACAAGGCACAGTTG+GGG + Chr3:98050746-98050765 MsG0380017578.01.T01:CDS 50.0%
AGGGCCTCAATGAAGTGAGA+AGG - Chr3:98050037-98050056 None:intergenic 50.0%
ATCATCTCGCCGTATCAAGC+TGG - Chr3:98046953-98046972 None:intergenic 50.0%
ATCCCTTGGCTTACTGTGGT+TGG + Chr3:98044966-98044985 MsG0380017578.01.T01:intron 50.0%
ATGTGCCTCCTGCTCAACAA+GGG + Chr3:98050431-98050450 MsG0380017578.01.T01:CDS 50.0%
CACTATCCCTTGGCTTACTG+TGG + Chr3:98044962-98044981 MsG0380017578.01.T01:intron 50.0%
CACTCAGAACCACAACGAGA+AGG + Chr3:98042622-98042641 MsG0380017578.01.T01:CDS 50.0%
CAGGACTACAAGGCACAGTT+GGG + Chr3:98050745-98050764 MsG0380017578.01.T01:CDS 50.0%
CCAAGTTAGAACGTGGAGTC+CGG + Chr3:98045364-98045383 MsG0380017578.01.T01:intron 50.0%
CCTGTACTTCCTCCGCAATA+AGG + Chr3:98046683-98046702 MsG0380017578.01.T01:intron 50.0%
CCTTCTCAGGCAAGAGAACA+GGG + Chr3:98049995-98050014 MsG0380017578.01.T01:CDS 50.0%
CGGAAGAGAGGCAATAAGCA+AGG - Chr3:98046759-98046778 None:intergenic 50.0%
CGGACTCCACGTTCTAACTT+GGG - Chr3:98045366-98045385 None:intergenic 50.0%
CGTGTACATCTGTACGACGA+AGG + Chr3:98046073-98046092 MsG0380017578.01.T01:intron 50.0%
CTGCCTGTCTAACCCATATG+AGG + Chr3:98049595-98049614 MsG0380017578.01.T01:intron 50.0%
CTTCTCAGGCAAGAGAACAG+GGG + Chr3:98049996-98050015 MsG0380017578.01.T01:CDS 50.0%
GAAGAGAGTAGGGTTGGATG+CGG - Chr3:98042528-98042547 None:intergenic 50.0%
GCAATATGTTGGGCCTGACT+TGG + Chr3:98050657-98050676 MsG0380017578.01.T01:CDS 50.0%
GCAATTGAATCCGTTGTGGC+AGG - Chr3:98049852-98049871 None:intergenic 50.0%
GCAGCCTTCTCACTTCATTG+AGG + Chr3:98050030-98050049 MsG0380017578.01.T01:CDS 50.0%
GCAGCTAGAATCAACGTGAG+TGG + Chr3:98043327-98043346 MsG0380017578.01.T01:intron 50.0%
GCCACGTGCTTTCAAATTCC+AGG - Chr3:98044521-98044540 None:intergenic 50.0%
GCTTTCATCGCATCCAAGTC+AGG - Chr3:98050673-98050692 None:intergenic 50.0%
GGCACGAAACCAGCTTGATA+CGG + Chr3:98046941-98046960 MsG0380017578.01.T01:intron 50.0%
GTACGTTGGCACATGAGGAT+TGG - Chr3:98045565-98045584 None:intergenic 50.0%
GTTAGCGACGTTGTGAATCG+CGG - Chr3:98048308-98048327 None:intergenic 50.0%
GTTCAGTTCGACTCCCGTTT+AGG - Chr3:98048233-98048252 None:intergenic 50.0%
TATGGCGATTGGGAACGCAA+TGG + Chr3:98042797-98042816 MsG0380017578.01.T01:intron 50.0%
TATGTGCCTCCTGCTCAACA+AGG + Chr3:98050430-98050449 MsG0380017578.01.T01:CDS 50.0%
TCCCAACCTGGCAAGAATGT+CGG + Chr3:98046450-98046469 MsG0380017578.01.T01:intron 50.0%
TCCCAATCGCCATACCTAGT+GGG - Chr3:98042791-98042810 None:intergenic 50.0%
TCGTTGTCGTGGAGAGATTC+TGG - Chr3:98042668-98042687 None:intergenic 50.0%
TTCCCAATCGCCATACCTAG+TGG - Chr3:98042792-98042811 None:intergenic 50.0%
! AATCAAGCTGATGACGTGGG+TGG + Chr3:98050610-98050629 MsG0380017578.01.T01:CDS 50.0%
! AGAGAGGAAGGAGCATGACA+AGG + Chr3:98046391-98046410 MsG0380017578.01.T01:intron 50.0%
! ATTGCGGAGGAAGTACAGGA+TGG - Chr3:98046682-98046701 None:intergenic 50.0%
! CCTTATTGCGGAGGAAGTAC+AGG - Chr3:98046686-98046705 None:intergenic 50.0%
! GAACGGTGGACTTCTTCGAA+AGG - Chr3:98048197-98048216 None:intergenic 50.0%
! GGTGAATCAAGCTGATGACG+TGG + Chr3:98050606-98050625 MsG0380017578.01.T01:CDS 50.0%
! GTTTTCATCGCCGTTAGTGG+AGG - Chr3:98045516-98045535 None:intergenic 50.0%
!! ATGGTGTTGCAGCTTCGGTT+TGG + Chr3:98048885-98048904 MsG0380017578.01.T01:intron 50.0%
!! CTGGGTTGGTCAAAGAGGTT+AGG + Chr3:98050281-98050300 MsG0380017578.01.T01:CDS 50.0%
!! CTGTGTGGTTGGCTTACTGA+GGG + Chr3:98044937-98044956 MsG0380017578.01.T01:intron 50.0%
!! CTTCTCGTTGTGGTTCTGAG+TGG - Chr3:98042624-98042643 None:intergenic 50.0%
!! GAAACTTCTAGCTCCCAACC+TGG + Chr3:98046438-98046457 MsG0380017578.01.T01:intron 50.0%
!! GCTCCAGAAGGGTATCATAC+AGG - Chr3:98050804-98050823 None:intergenic 50.0%
!! TCGTGGAGAGATTCTGGCTT+CGG - Chr3:98042662-98042681 None:intergenic 50.0%
!! TCTGTGTGGTTGGCTTACTG+AGG + Chr3:98044936-98044955 MsG0380017578.01.T01:intron 50.0%
AACCCTACTCTCTTCCGCAC+CGG + Chr3:98042533-98042552 MsG0380017578.01.T01:CDS 55.0%
ACGAGTCAGGTGTTCGGATC+CGG - Chr3:98042555-98042574 None:intergenic 55.0%
AGACTGACGGAGGGACTAAG+TGG + Chr3:98044050-98044069 MsG0380017578.01.T01:intron 55.0%
AGCCCACTAGGTATGGCGAT+TGG + Chr3:98042786-98042805 MsG0380017578.01.T01:intron 55.0%
AGCTGTTCTAGCAGCCGTGA+GGG - Chr3:98050398-98050417 None:intergenic 55.0%
ATCCGGTGCGGAAGAGAGTA+GGG - Chr3:98042538-98042557 None:intergenic 55.0%
CACCGAGCCTCCATATTCGT+AGG - Chr3:98043512-98043531 None:intergenic 55.0%
CACTCTTCTCAGACTGACGG+AGG + Chr3:98044040-98044059 MsG0380017578.01.T01:intron 55.0%
CAGGGCCGTTCCTACGAATA+TGG + Chr3:98043499-98043518 MsG0380017578.01.T01:intron 55.0%
CCCTGTTCTCTTGCCTGAGA+AGG - Chr3:98049998-98050017 None:intergenic 55.0%
CCGGACTCCACGTTCTAACT+TGG - Chr3:98045367-98045386 None:intergenic 55.0%
CTCCGTCAGTCTGAGAAGAG+TGG - Chr3:98044042-98044061 None:intergenic 55.0%
GAGAGAGAGAGAGGAGAGAG+CGG + Chr3:98044176-98044195 MsG0380017578.01.T01:intron 55.0%
GAGAGGAATGGAACGTGCGT+TGG + Chr3:98043834-98043853 MsG0380017578.01.T01:intron 55.0%
GCAGGACTACAAGGCACAGT+TGG + Chr3:98050744-98050763 MsG0380017578.01.T01:CDS 55.0%
GCATGGCACTGCAAGTGACA+TGG - Chr3:98049383-98049402 None:intergenic 55.0%
GCCCACTAGGTATGGCGATT+GGG + Chr3:98042787-98042806 MsG0380017578.01.T01:intron 55.0%
GCCGACATTCTTGCCAGGTT+GGG - Chr3:98046454-98046473 None:intergenic 55.0%
GCTTCATTTGTGCCGTCCAC+AGG - Chr3:98045494-98045513 None:intergenic 55.0%
GGACTACAAGGCACAGTTGG+GGG + Chr3:98050747-98050766 MsG0380017578.01.T01:CDS 55.0%
GGCCGTTCCTACGAATATGG+AGG + Chr3:98043502-98043521 MsG0380017578.01.T01:intron 55.0%
GGGACATTGGATCAAGGTGC+CGG + Chr3:98050952-98050971 MsG0380017578.01.T01:CDS 55.0%
GGGGCCATAGATCTTCAGAG+TGG + Chr3:98050451-98050470 MsG0380017578.01.T01:CDS 55.0%
GTGAGGTAGGTGGGCCTAAA+GGG + Chr3:98042759-98042778 MsG0380017578.01.T01:CDS 55.0%
TAGGGCGAAGCAGCAGTGAA+CGG - Chr3:98048214-98048233 None:intergenic 55.0%
TCTATGGCCCCTTGTTGAGC+AGG - Chr3:98050442-98050461 None:intergenic 55.0%
TGAATCGCGGTGCAGAGTGA+AGG - Chr3:98048295-98048314 None:intergenic 55.0%
TGACGGAGGGACTAAGTGGA+TGG + Chr3:98044054-98044073 MsG0380017578.01.T01:intron 55.0%
TGCCGACATTCTTGCCAGGT+TGG - Chr3:98046455-98046474 None:intergenic 55.0%
TGTGCCTCCTGCTCAACAAG+GGG + Chr3:98050432-98050451 MsG0380017578.01.T01:CDS 55.0%
! ACTGCTGCTTCGCCCTAAAC+GGG + Chr3:98048217-98048236 MsG0380017578.01.T01:intron 55.0%
! CACTGCTGCTTCGCCCTAAA+CGG + Chr3:98048216-98048235 MsG0380017578.01.T01:intron 55.0%
! GGGCAGCTTTTGCCTTTGGA+AGG - Chr3:98050378-98050397 None:intergenic 55.0%
! GTGAGGGCAGCTTTTGCCTT+TGG - Chr3:98050382-98050401 None:intergenic 55.0%
! TATAGCACCGAGCCTCCACA+GGG - Chr3:98043929-98043948 None:intergenic 55.0%
!! CTCGTTGTGGTTCTGAGTGG+AGG - Chr3:98042621-98042640 None:intergenic 55.0%
!! GTTGTGGTTCTGAGTGGAGG+AGG - Chr3:98042618-98042637 None:intergenic 55.0%
!! TTGTTCGACGCTCTAGGGAG+TGG - Chr3:98046367-98046386 None:intergenic 55.0%
ACAGAGCCTGCTCCTGTGGA+CGG + Chr3:98045479-98045498 MsG0380017578.01.T01:intron 60.0%
AGGAGAGAGCGGAGAGAGAG+AGG + Chr3:98044244-98044263 MsG0380017578.01.T01:intron 60.0%
AGGGAGGGAGAGAGAGAGAG+AGG + Chr3:98044167-98044186 MsG0380017578.01.T01:intron 60.0%
AGTAGGGTTGGATGCGGTGG+TGG - Chr3:98042522-98042541 None:intergenic 60.0%
ATGGCCCCTTGTTGAGCAGG+AGG - Chr3:98050439-98050458 None:intergenic 60.0%
CAGCTGTTCTAGCAGCCGTG+AGG - Chr3:98050399-98050418 None:intergenic 60.0%
CAGGCAAGAGAACAGGGGAG+AGG + Chr3:98050001-98050020 MsG0380017578.01.T01:CDS 60.0%
CTAAAGGGCCTGAGCCCACT+AGG + Chr3:98042774-98042793 MsG0380017578.01.T01:CDS 60.0%
GAGAGTAGGGTTGGATGCGG+TGG - Chr3:98042525-98042544 None:intergenic 60.0%
GAGGAGTCGCGTGACTGAGT+TGG - Chr3:98042585-98042604 None:intergenic 60.0%
GATCCGGTGCGGAAGAGAGT+AGG - Chr3:98042539-98042558 None:intergenic 60.0%
GGAGAGAGCGGAGAGAGAGA+GGG + Chr3:98044245-98044264 MsG0380017578.01.T01:intron 60.0%
GGAGAGCAAGCGAGGGAAAG+AGG - Chr3:98042501-98042520 None:intergenic 60.0%
GGTGAGGTAGGTGGGCCTAA+AGG + Chr3:98042758-98042777 MsG0380017578.01.T01:CDS 60.0%
GGTGCGGAAGAGAGTAGGGT+TGG - Chr3:98042534-98042553 None:intergenic 60.0%
TAGAGAGAGGGAGGGAGGGA+GGG + Chr3:98044132-98044151 MsG0380017578.01.T01:intron 60.0%
TCAGGTGTTCGGATCCGGTG+CGG - Chr3:98042550-98042569 None:intergenic 60.0%
TGGAGGAGGAGGAGGAGAAG+AGG - Chr3:98042604-98042623 None:intergenic 60.0%
TTAGAGAGAGGGAGGGAGGG+AGG + Chr3:98044131-98044150 MsG0380017578.01.T01:intron 60.0%
TTTGTGCCGTCCACAGGAGC+AGG - Chr3:98045488-98045507 None:intergenic 60.0%
! CTATAGCACCGAGCCTCCAC+AGG - Chr3:98043930-98043949 None:intergenic 60.0%
! GGTGTGCCGACATTCTTGCC+AGG - Chr3:98046459-98046478 None:intergenic 60.0%
! GTTCTGAGTGGAGGAGGAGG+AGG - Chr3:98042612-98042631 None:intergenic 60.0%
!! CGAATATGGAGGCTCGGTGC+TGG + Chr3:98043513-98043532 MsG0380017578.01.T01:intron 60.0%
!! CTAGTGGGCTCAGGCCCTTT+AGG - Chr3:98042776-98042795 None:intergenic 60.0%
!! GTGGTTCTGAGTGGAGGAGG+AGG - Chr3:98042615-98042634 None:intergenic 60.0%
!! TCGCCATACCTAGTGGGCTC+AGG - Chr3:98042785-98042804 None:intergenic 60.0%
!! TTTTGGAGGCCCATGCCCTG+TGG + Chr3:98043911-98043930 MsG0380017578.01.T01:intron 60.0%
ACCGAGCCTCCACAGGGCAT+GGG - Chr3:98043923-98043942 None:intergenic 65.0%
ACTTCACAGGGCCGGAGCCT+AGG - Chr3:98043967-98043986 None:intergenic 65.0%
CGTCACAGAGCCTGCTCCTG+TGG + Chr3:98045475-98045494 MsG0380017578.01.T01:intron 65.0%
CTTCACAGGGCCGGAGCCTA+GGG - Chr3:98043966-98043985 None:intergenic 65.0%
GCGGAGAGAGAGAGGGAGAG+AGG + Chr3:98044252-98044271 MsG0380017578.01.T01:intron 65.0%
GGCGAAGCAGCAGTGAACGG+TGG - Chr3:98048211-98048230 None:intergenic 65.0%
GGGCCTGAGCCCACTAGGTA+TGG + Chr3:98042779-98042798 MsG0380017578.01.T01:intron 65.0%
TAGCGCTGCTTGCACCCCCT+AGG + Chr3:98043947-98043966 MsG0380017578.01.T01:intron 65.0%
TGCTTGCACCCCCTAGGCTC+CGG + Chr3:98043953-98043972 MsG0380017578.01.T01:intron 65.0%
TTCACAGGGCCGGAGCCTAG+GGG - Chr3:98043965-98043984 None:intergenic 65.0%
!! CGGTGGTGGAGAGCAAGCGA+GGG - Chr3:98042508-98042527 None:intergenic 65.0%
AGAGAGGGAGGGAGGGAGGG+AGG + Chr3:98044135-98044154 MsG0380017578.01.T01:intron 70.0%
CACCGAGCCTCCACAGGGCA+TGG - Chr3:98043924-98043943 None:intergenic 70.0%
GAGAGGGAGGGAGGGAGGGA+GGG + Chr3:98044136-98044155 MsG0380017578.01.T01:intron 70.0%
GCCCATGCCCTGTGGAGGCT+CGG + Chr3:98043919-98043938 MsG0380017578.01.T01:intron 70.0%
TCACAGGGCCGGAGCCTAGG+GGG - Chr3:98043964-98043983 None:intergenic 70.0%
TGGAGGCCCATGCCCTGTGG+AGG + Chr3:98043914-98043933 MsG0380017578.01.T01:intron 70.0%
!! GCGGTGGTGGAGAGCAAGCG+AGG - Chr3:98042509-98042528 None:intergenic 70.0%
AGGGAGGGAGGGAGGGAGGG+AGG + Chr3:98044139-98044158 MsG0380017578.01.T01:intron 75.0%
GGGAGGGAGGGAGGGAGGGA+GGG + Chr3:98044140-98044159 MsG0380017578.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 98042491 98051098 98042491 ID=MsG0380017578.01;Name=MsG0380017578.01
Chr3 mRNA 98042491 98051098 98042491 ID=MsG0380017578.01.T01;Parent=MsG0380017578.01;Name=MsG0380017578.01.T01;_AED=0.44;_eAED=0.46;_QI=0|0|0|1|1|1|4|0|555
Chr3 exon 98042491 98042795 98042491 ID=MsG0380017578.01.T01:exon:31945;Parent=MsG0380017578.01.T01
Chr3 exon 98045238 98045380 98045238 ID=MsG0380017578.01.T01:exon:31946;Parent=MsG0380017578.01.T01
Chr3 exon 98049826 98050094 98049826 ID=MsG0380017578.01.T01:exon:31947;Parent=MsG0380017578.01.T01
Chr3 exon 98050148 98051098 98050148 ID=MsG0380017578.01.T01:exon:31948;Parent=MsG0380017578.01.T01
Chr3 CDS 98042491 98042795 98042491 ID=MsG0380017578.01.T01:cds;Parent=MsG0380017578.01.T01
Chr3 CDS 98045238 98045380 98045238 ID=MsG0380017578.01.T01:cds;Parent=MsG0380017578.01.T01
Chr3 CDS 98049826 98050094 98049826 ID=MsG0380017578.01.T01:cds;Parent=MsG0380017578.01.T01
Chr3 CDS 98050148 98051098 98050148 ID=MsG0380017578.01.T01:cds;Parent=MsG0380017578.01.T01
Gene Sequence

>MsG0380017578.01.T01

ATGACAACCTCTTTCCCTCGCTTGCTCTCCACCACCGCATCCAACCCTACTCTCTTCCGCACCGGATCCGAACACCTGACTCGTTCTGTTTCCAACTCAGTCACGCGACTCCTCTTCTCCTCCTCCTCCTCCACTCAGAACCACAACGAGAAGGAACAAACACAGACACCGAAGCCAGAATCTCTCCACGACAACGATAAACAAAGCCAAAAGGAAGAAGAAGAAGAAGAAGATGATGATGATGATATTGATATGAACAAAGAAACGGGTGAGGTAGGTGGGCCTAAAGGGCCTGAGCCCACTAGATTTGCCATGTATGTAGCTAAAATCGTGGAATTGTATGTTTCCACGATAGATAGGCAAACAAATTGGCATGTTTGTGGACTTGATTTAGTAGTTACTCGATTGAATTTGAAAATGCAAGTTCATGCCCAAGTTAGAACGTGGAAAGCCATGTCTACATCTTATCTTCCTGCCACAACGGATTCAATTGCTCAGGCATTGGAGGCTAAAGACCCTTCTGATGCGATATCCATTCTTTATCGTGTACTTGATGATCCATCTTCTTCACCAGAAGCTCTGCGTATGAAAGAGCAGGCCATCACAAATCTTACTGACCTTCTCAGGCAAGAGAACAGGGGAGAGGATCTGCGCAGCCTTCTCACTTCATTGAGGCCCTTTTTCTCCTTGATTCCTAAGGCAAAAACTGCAAAGATTATTTCACTGTGTAAAGAAATGGTGCAGTGGACTCGTGCTGAAAAGCGTACTTTTCTGAGGCAACGAATTGAGGCAAGACTTGCAGCGCTTTTGATGGAAACTAAGGAGTATTCAGAAGCTTTGACTCTTCTTTCTGGGTTGGTCAAAGAGGTTAGGAGATTAGATGACAAACTTCTTCTTGTAGACATTGACTTGCTCGAAAGCAAACTGCACTTCTCATTAAGAAACCTTCCAAAGGCAAAAGCTGCCCTCACGGCTGCTAGAACAGCTGCAAATGCTATTTATGTGCCTCCTGCTCAACAAGGGGCCATAGATCTTCAGAGTGGAATACTTCATGCTGAGGAGAAGGACTACAAAACTGCATACAGCTATTTCTTTGAAGCCTTTGAGTCTTTCAATGCTCTTGAAGACCCTAAGGCTATTTTCAGCCTGAAATATATGTTGTTGTGTAAGATCATGGTGAATCAAGCTGATGACGTGGGTGGAATTATTTCTTCTAAGGCAGGATTGCAATATGTTGGGCCTGACTTGGATGCGATGAAAGCTGTTGCTGATGCTTATTCTAAGCGATCCCTTAAGTTTTTCGAAACTGCTTTGCAGGACTACAAGGCACAGTTGGGGGAAGACCCAATTGTTCACAGACACATTTCATCCCTGTATGATACCCTTCTGGAGCAGAATCTTTGTAGGTTGATTGAGCCATTCTCAAGAGTTGAGATTGCACATATTGCTGAGCTTATCGAGCTTCCAATTGTTCACGTTGAGCGGAAGATGTCTCAGATGATTTTGGACAAGAAGTTTGCTGGGACATTGGATCAAGGTGCCGGATGCCTCGTTATATTCGATGATCCCAAGACTGATGCAATATACCCTGCAACTTTAGAGACCATTTCCAATGTTGGGAAAGTGGTTGACAGTCTTTATGTTAGGTCTGCTAAGATCATGGCATGA
Protein sequence

>MsG0380017578.01.T01

MTTSFPRLLSTTASNPTLFRTGSEHLTRSVSNSVTRLLFSSSSSTQNHNEKEQTQTPKPESLHDNDKQSQKEEEEEEDDDDDIDMNKETGEVGGPKGPEPTRFAMYVAKIVELYVSTIDRQTNWHVCGLDLVVTRLNLKMQVHAQVRTWKAMSTSYLPATTDSIAQALEAKDPSDAISILYRVLDDPSSSPEALRMKEQAITNLTDLLRQENRGEDLRSLLTSLRPFFSLIPKAKTAKIISLCKEMVQWTRAEKRTFLRQRIEARLAALLMETKEYSEALTLLSGLVKEVRRLDDKLLLVDIDLLESKLHFSLRNLPKAKAALTAARTAANAIYVPPAQQGAIDLQSGILHAEEKDYKTAYSYFFEAFESFNALEDPKAIFSLKYMLLCKIMVNQADDVGGIISSKAGLQYVGPDLDAMKAVADAYSKRSLKFFETALQDYKAQLGEDPIVHRHISSLYDTLLEQNLCRLIEPFSRVEIAHIAELIELPIVHVERKMSQMILDKKFAGTLDQGAGCLVIFDDPKTDAIYPATLETISNVGKVVDSLYVRSAKIMA*