AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580024507.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024507.01.T01 MTR_5g012470 99.510 204 1 0 1 204 1 204 5.36e-153 422
MsG0580024507.01.T01 MTR_5g006840 96.500 200 7 0 1 200 1 200 2.27e-146 405
MsG0580024507.01.T01 MTR_2g050000 92.381 105 6 1 95 199 2 104 1.53e-67 202
MsG0580024507.01.T01 MTR_1g112250 28.249 177 114 4 10 178 42 213 9.66e-13 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024507.01.T01 AT3G22630 89.394 198 21 0 1 198 1 198 7.10e-134 374
MsG0580024507.01.T01 AT4G14800 87.374 198 25 0 1 198 1 198 3.41e-130 364
MsG0580024507.01.T01 AT4G14800 80.841 214 25 1 1 198 1 214 9.23e-126 353

Find 57 sgRNAs with CRISPR-Local

Find 132 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTTCACTCAATCGGTTTC+TGG 0.038319 5:-5784864 None:intergenic
GAAACCATGGAATGCGTATT+TGG 0.216378 5:+5784902 MsG0580024507.01.T01:exon
CTTTGTATCAATTCCGTAAT+GGG 0.276520 5:+5785180 MsG0580024507.01.T01:CDS
CTTTCACTCAATCGGTTTCT+GGG 0.300410 5:-5784863 None:intergenic
AAGCTTGAAAAGGGAGCTTT+TGG 0.328358 5:+5786510 MsG0580024507.01.T01:CDS
ACCGTATTCCATATCTTGAT+TGG 0.346422 5:+5786757 MsG0580024507.01.T01:three_prime_UTR
TTTCTTCTCTTTCACTCAAT+CGG 0.363434 5:-5784871 None:intergenic
TCTGTGAACATCCTTCTTGC+TGG 0.377484 5:+5786429 MsG0580024507.01.T01:CDS
CTGATGTTGTTTGTTTATGC+TGG 0.409289 5:-5784815 None:intergenic
AAAGAAGTCCAATCAAGATA+TGG 0.414037 5:-5786765 None:intergenic
GCTTTGTATCAATTCCGTAA+TGG 0.426748 5:+5785179 MsG0580024507.01.T01:CDS
AACACTTCACAAGCTTGAAA+AGG 0.430702 5:+5786500 MsG0580024507.01.T01:CDS
AGAAGGATGTTCACAGAGTA+GGG 0.434546 5:-5786423 None:intergenic
TCAAAACCACCAAGAGAAAG+AGG 0.443830 5:-5786826 None:intergenic
AAGAAGGATGTTCACAGAGT+AGG 0.469415 5:-5786424 None:intergenic
TCCAATCAAGATATGGAATA+CGG 0.477437 5:-5786758 None:intergenic
TTAATTCAAGCTGAAGGAAC+AGG 0.478420 5:-5786735 None:intergenic
CTAGCGGAGAACCCGGTGAC+AGG 0.480056 5:+5785044 MsG0580024507.01.T01:CDS
GAATGCGTATTTGGATTAGT+AGG 0.482356 5:+5784911 MsG0580024507.01.T01:CDS
CTAATTATGTGGTAATCTTG+TGG 0.482785 5:+5787052 MsG0580024507.01.T01:three_prime_UTR
TAGTGAGAGGGATCCCATTA+CGG 0.491022 5:-5785193 None:intergenic
ACACTTCACAAGCTTGAAAA+GGG 0.512694 5:+5786501 MsG0580024507.01.T01:CDS
TGTCATTGTTTCTAATTATG+TGG 0.519784 5:+5787041 MsG0580024507.01.T01:three_prime_UTR
AATCAGATCAAGGTTGGTTG+TGG 0.521276 5:+5786632 MsG0580024507.01.T01:CDS
TGCAGAAATCAGATCAAGGT+TGG 0.523715 5:+5786626 MsG0580024507.01.T01:CDS
TAGTCAATATAGTATAGTGA+TGG 0.533828 5:-5786471 None:intergenic
ATCAAAATTGTTGACAAGGA+TGG 0.541090 5:+5786672 MsG0580024507.01.T01:CDS
ACTCGCTACTGCGCTCCGCA+AGG 0.542105 5:+5785247 MsG0580024507.01.T01:CDS
GCTGGTTATGACAAAGAGAC+AGG 0.546617 5:+5786447 MsG0580024507.01.T01:CDS
TAATCCAAATACGCATTCCA+TGG 0.558419 5:-5784906 None:intergenic
CACAAACTCGTTGCTGCTAG+CGG 0.562076 5:+5785028 MsG0580024507.01.T01:CDS
GAGAGAATGAAACCTGTCAC+CGG 0.562718 5:-5785056 None:intergenic
TGTTATCAAAATTGTTGACA+AGG 0.566229 5:+5786668 MsG0580024507.01.T01:CDS
CTTTGTCATAACCAGCAAGA+AGG 0.572175 5:-5786440 None:intergenic
AGAAAGAAAGAAAGAAACCA+TGG 0.580581 5:+5784889 MsG0580024507.01.T01:exon
CAAAACCACCAAGAGAAAGA+GGG 0.581678 5:-5786825 None:intergenic
CAGCAGCAGCAGTAGTGAGA+GGG 0.586152 5:-5785205 None:intergenic
GCAGCAGCAGCAGTAGTGAG+AGG 0.587393 5:-5785206 None:intergenic
GCTGATTAGTGCTTGAGGAA+AGG 0.595416 5:+5786986 MsG0580024507.01.T01:three_prime_UTR
AGTCAATATAGTATAGTGAT+GGG 0.602500 5:-5786470 None:intergenic
ATAGTGTTTAATATACCTCA+AGG 0.604638 5:+5786959 MsG0580024507.01.T01:three_prime_UTR
GCATTGCAGAAATCAGATCA+AGG 0.606697 5:+5786622 MsG0580024507.01.T01:CDS
ATACGGTTAATTCAAGCTGA+AGG 0.609793 5:-5786741 None:intergenic
CACTAATCAGCACTGCCTTG+AGG 0.612615 5:-5786974 None:intergenic
GTTGCTGCTAGCGGAGAACC+CGG 0.616843 5:+5785037 MsG0580024507.01.T01:CDS
CTACCACAGTGGAATGTCTG+TGG 0.631323 5:+5786572 MsG0580024507.01.T01:CDS
TGCATGGCGTCAATCAGTGA+AGG 0.631931 5:+5786707 MsG0580024507.01.T01:CDS
ATGGTGCAAGAGAGTATGCA+TGG 0.636054 5:+5786691 MsG0580024507.01.T01:CDS
CTTCATTTGATTTGTGTACG+AGG 0.644073 5:-5784982 None:intergenic
AGAGAATGAAACCTGTCACC+GGG 0.644260 5:-5785055 None:intergenic
GCTGCTGCTAATTTCACTCG+TGG 0.646433 5:+5785221 MsG0580024507.01.T01:CDS
AAAACCACCAAGAGAAAGAG+GGG 0.653791 5:-5786824 None:intergenic
AGATGTATCAGCTACTACGA+TGG 0.672169 5:-5784945 None:intergenic
GCAGTGCTGATTAGTGCTTG+AGG 0.680548 5:+5786981 MsG0580024507.01.T01:three_prime_UTR
CAACGAGTTTGTGAGAATCG+AGG 0.687571 5:-5785018 None:intergenic
ATGGACAGACACTACCACAG+TGG 0.770189 5:+5786561 MsG0580024507.01.T01:CDS
CTTCCACAGACATTCCACTG+TGG 0.786939 5:-5786575 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATGCTAAAGTTTAATATT+TGG + Chr5:5785364-5785383 MsG0580024507.01.T01:intron 15.0%
!!! ACTTATTTAAGATTTTCTAT+TGG + Chr5:5785414-5785433 MsG0580024507.01.T01:intron 15.0%
!! AAAGTATAGCACTAATTATT+AGG - Chr5:5785298-5785317 None:intergenic 20.0%
!! AAGTATAGCACTAATTATTA+GGG - Chr5:5785297-5785316 None:intergenic 20.0%
!! TTATAGCATATACATACAAA+TGG + Chr5:5785552-5785571 MsG0580024507.01.T01:intron 20.0%
!!! ACAATTTTGATAACAAAGTT+TGG - Chr5:5786663-5786682 None:intergenic 20.0%
!!! ATTCATTGATTTTCACTTTT+AGG + Chr5:5785123-5785142 MsG0580024507.01.T01:intron 20.0%
!!! GTAGTTTTCATAAATTATTC+TGG - Chr5:5785532-5785551 None:intergenic 20.0%
!!! TAATATTTGGATTTAGTTCA+TGG + Chr5:5785377-5785396 MsG0580024507.01.T01:intron 20.0%
!!! TTAAATTTTGTGAGACTATT+TGG + Chr5:5785998-5786017 MsG0580024507.01.T01:intron 20.0%
!!! TTCATTGATTTTCACTTTTA+GGG + Chr5:5785124-5785143 MsG0580024507.01.T01:intron 20.0%
! AAACAAAGCTTATGTCAATT+GGG + Chr5:5786260-5786279 MsG0580024507.01.T01:intron 25.0%
! AACTCAAAATCAAAACTTGA+AGG - Chr5:5785095-5785114 None:intergenic 25.0%
! AATTATTAGGGTTTGGAAAA+AGG - Chr5:5785285-5785304 None:intergenic 25.0%
! AGTCAATATAGTATAGTGAT+GGG - Chr5:5786473-5786492 None:intergenic 25.0%
! ATAGTGTTTAATATACCTCA+AGG + Chr5:5786959-5786978 MsG0580024507.01.T01:three_prime_UTR 25.0%
! ATTATTAGGGTTTGGAAAAA+GGG - Chr5:5785284-5785303 None:intergenic 25.0%
! TAATACTTGCAAGACTATTT+GGG + Chr5:5785440-5785459 MsG0580024507.01.T01:intron 25.0%
! TAGTCAATATAGTATAGTGA+TGG - Chr5:5786474-5786493 None:intergenic 25.0%
! TGATATAACATAGCAGATAT+TGG - Chr5:5785885-5785904 None:intergenic 25.0%
! TGTTATCAAAATTGTTGACA+AGG + Chr5:5786668-5786687 MsG0580024507.01.T01:CDS 25.0%
! TTAATACTTGCAAGACTATT+TGG + Chr5:5785439-5785458 MsG0580024507.01.T01:intron 25.0%
!! GAAAATCTTTTGTCTCTAAA+TGG + Chr5:5786858-5786877 MsG0580024507.01.T01:three_prime_UTR 25.0%
!! TATAGTTGCAATTTGGAATT+GGG + Chr5:5785624-5785643 MsG0580024507.01.T01:intron 25.0%
!!! ATTTTGATAACAAAGTTTGG+AGG - Chr5:5786660-5786679 None:intergenic 25.0%
!!! CATCATTGATAGTGAAAAAT+AGG - Chr5:5786544-5786563 None:intergenic 25.0%
!!! CTATTTTTCACTATCAATGA+TGG + Chr5:5786542-5786561 MsG0580024507.01.T01:CDS 25.0%
!!! TGTCATTGTTTCTAATTATG+TGG + Chr5:5787041-5787060 MsG0580024507.01.T01:three_prime_UTR 25.0%
AAACAGGTTAATTGAACACT+TGG - Chr5:5786236-5786255 None:intergenic 30.0%
AAAGAAGTCCAATCAAGATA+TGG - Chr5:5786768-5786787 None:intergenic 30.0%
AACAGGTTAATTGAACACTT+GGG - Chr5:5786235-5786254 None:intergenic 30.0%
AGAAAGAAAGAAAGAAACCA+TGG + Chr5:5784889-5784908 MsG0580024507.01.T01:exon 30.0%
ATCAAAATTGTTGACAAGGA+TGG + Chr5:5786672-5786691 MsG0580024507.01.T01:CDS 30.0%
ATTCCAAATTGCAACTATAC+TGG - Chr5:5785623-5785642 None:intergenic 30.0%
CAAACAAAGCTTATGTCAAT+TGG + Chr5:5786259-5786278 MsG0580024507.01.T01:intron 30.0%
CTAATTATGTGGTAATCTTG+TGG + Chr5:5787052-5787071 MsG0580024507.01.T01:three_prime_UTR 30.0%
CTTTGTATCAATTCCGTAAT+GGG + Chr5:5785180-5785199 MsG0580024507.01.T01:CDS 30.0%
TAGCACTAATTATTAGGGTT+TGG - Chr5:5785292-5785311 None:intergenic 30.0%
TCCAATCAAGATATGGAATA+CGG - Chr5:5786761-5786780 None:intergenic 30.0%
TTATTAGGGTTTGGAAAAAG+GGG - Chr5:5785283-5785302 None:intergenic 30.0%
TTGCATTGTGATTATCGATA+AGG + Chr5:5786359-5786378 MsG0580024507.01.T01:intron 30.0%
TTTCTTCTCTTTCACTCAAT+CGG - Chr5:5784874-5784893 None:intergenic 30.0%
! AGATTTGAAATTTGCATCGT+CGG + Chr5:5785751-5785770 MsG0580024507.01.T01:intron 30.0%
! ATTTAGTTCATGGACTTGTT+TGG + Chr5:5785387-5785406 MsG0580024507.01.T01:intron 30.0%
! GTATAGTTGCAATTTGGAAT+TGG + Chr5:5785623-5785642 MsG0580024507.01.T01:intron 30.0%
! TAAGCACTTATGCTTTTGTT+TGG + Chr5:5785943-5785962 MsG0580024507.01.T01:intron 30.0%
! TTTTAACAGTCTGATCTTGT+CGG - Chr5:5785582-5785601 None:intergenic 30.0%
!! ACTTATGCTTTTGTTTGGAT+CGG + Chr5:5785948-5785967 MsG0580024507.01.T01:intron 30.0%
!! AGTAAGTTGAAAACAGCTTT+TGG - Chr5:5785499-5785518 None:intergenic 30.0%
!! CAATTGACATAAGCTTTGTT+TGG - Chr5:5786261-5786280 None:intergenic 30.0%
!! TAAGCTTTGTTTGGATAAAC+AGG - Chr5:5786252-5786271 None:intergenic 30.0%
AACACTTCACAAGCTTGAAA+AGG + Chr5:5786500-5786519 MsG0580024507.01.T01:CDS 35.0%
ACACTTCACAAGCTTGAAAA+GGG + Chr5:5786501-5786520 MsG0580024507.01.T01:CDS 35.0%
ACAGGTTAATTGAACACTTG+GGG - Chr5:5786234-5786253 None:intergenic 35.0%
ACCGTATTCCATATCTTGAT+TGG + Chr5:5786757-5786776 MsG0580024507.01.T01:three_prime_UTR 35.0%
AGGAAAGGTCTACTGAAAAA+AGG + Chr5:5787001-5787020 MsG0580024507.01.T01:three_prime_UTR 35.0%
AGTGTATTGCAGAACAATAG+TGG + Chr5:5785854-5785873 MsG0580024507.01.T01:intron 35.0%
ATACGGTTAATTCAAGCTGA+AGG - Chr5:5786744-5786763 None:intergenic 35.0%
ATGATAAGCTGTTGTGCTTT+AGG + Chr5:5786180-5786199 MsG0580024507.01.T01:intron 35.0%
ATGGCTAAATGAGTGAATGT+GGG + Chr5:5785795-5785814 MsG0580024507.01.T01:intron 35.0%
ATTCAGCTACTGATATGCTT+AGG + Chr5:5786306-5786325 MsG0580024507.01.T01:intron 35.0%
CATTCACTCATTTAGCCATA+TGG - Chr5:5785794-5785813 None:intergenic 35.0%
CGTGTATTTATACGTGAACT+TGG + Chr5:5786386-5786405 MsG0580024507.01.T01:intron 35.0%
CTTATCATGATAAGCGCTTA+CGG - Chr5:5786168-5786187 None:intergenic 35.0%
GCTTTGTATCAATTCCGTAA+TGG + Chr5:5785179-5785198 MsG0580024507.01.T01:CDS 35.0%
TAATCCAAATACGCATTCCA+TGG - Chr5:5784909-5784928 None:intergenic 35.0%
TATGGCTAAATGAGTGAATG+TGG + Chr5:5785794-5785813 MsG0580024507.01.T01:intron 35.0%
TCGATAATCACAATGCAACA+TGG - Chr5:5786357-5786376 None:intergenic 35.0%
TTAATTCAAGCTGAAGGAAC+AGG - Chr5:5786738-5786757 None:intergenic 35.0%
TTACTCCTAAGTGCTTTCAT+GGG + Chr5:5785335-5785354 MsG0580024507.01.T01:intron 35.0%
TTTACTCCTAAGTGCTTTCA+TGG + Chr5:5785334-5785353 MsG0580024507.01.T01:intron 35.0%
! AGCTTTTGGACATCATAAGT+TGG - Chr5:5785485-5785504 None:intergenic 35.0%
! CTGATGTTGTTTGTTTATGC+TGG - Chr5:5784818-5784837 None:intergenic 35.0%
! TTTGTTTGGATCGGCTTATT+GGG + Chr5:5785957-5785976 MsG0580024507.01.T01:intron 35.0%
!! CTTCATTTGATTTGTGTACG+AGG - Chr5:5784985-5785004 None:intergenic 35.0%
!! GAATGCGTATTTGGATTAGT+AGG + Chr5:5784911-5784930 MsG0580024507.01.T01:CDS 35.0%
!! TTTTGTTTGGATCGGCTTAT+TGG + Chr5:5785956-5785975 MsG0580024507.01.T01:intron 35.0%
!!! ATTTTTTCCCCTCTTTCTCT+TGG + Chr5:5786817-5786836 MsG0580024507.01.T01:three_prime_UTR 35.0%
AAAACCACCAAGAGAAAGAG+GGG - Chr5:5786827-5786846 None:intergenic 40.0%
AAGAAGGATGTTCACAGAGT+AGG - Chr5:5786427-5786446 None:intergenic 40.0%
AGAAGGATGTTCACAGAGTA+GGG - Chr5:5786426-5786445 None:intergenic 40.0%
AGATGTATCAGCTACTACGA+TGG - Chr5:5784948-5784967 None:intergenic 40.0%
CAAAACCACCAAGAGAAAGA+GGG - Chr5:5786828-5786847 None:intergenic 40.0%
CTTTGTCATAACCAGCAAGA+AGG - Chr5:5786443-5786462 None:intergenic 40.0%
GAAACCATGGAATGCGTATT+TGG + Chr5:5784902-5784921 MsG0580024507.01.T01:exon 40.0%
GCATTGCAGAAATCAGATCA+AGG + Chr5:5786622-5786641 MsG0580024507.01.T01:CDS 40.0%
GGTTTGGAAAAAGGGGTAAA+TGG - Chr5:5785276-5785295 None:intergenic 40.0%
TAGGTCGAGATTAGACAGTA+TGG + Chr5:5785688-5785707 MsG0580024507.01.T01:intron 40.0%
TCAAAACCACCAAGAGAAAG+AGG - Chr5:5786829-5786848 None:intergenic 40.0%
TGCAGAAATCAGATCAAGGT+TGG + Chr5:5786626-5786645 MsG0580024507.01.T01:CDS 40.0%
TTGTTAAGTAGCAGCTACAG+CGG - Chr5:5785908-5785927 None:intergenic 40.0%
! AAGCTTGAAAAGGGAGCTTT+TGG + Chr5:5786510-5786529 MsG0580024507.01.T01:CDS 40.0%
! AATCAGATCAAGGTTGGTTG+TGG + Chr5:5786632-5786651 MsG0580024507.01.T01:CDS 40.0%
! CTTTCACTCAATCGGTTTCT+GGG - Chr5:5784866-5784885 None:intergenic 40.0%
! TCTTTCACTCAATCGGTTTC+TGG - Chr5:5784867-5784886 None:intergenic 40.0%
! TTGTTTGGATCGGCTTATTG+GGG + Chr5:5785958-5785977 MsG0580024507.01.T01:intron 40.0%
!! ATCAACCCATGAAAGCACTT+AGG - Chr5:5785343-5785362 None:intergenic 40.0%
!! GAAAAGGGAGCTTTTGGTTA+CGG + Chr5:5786516-5786535 MsG0580024507.01.T01:CDS 40.0%
AGAGAATGAAACCTGTCACC+GGG - Chr5:5785058-5785077 None:intergenic 45.0%
AGGGGTAAATGGATACCTTG+CGG - Chr5:5785265-5785284 None:intergenic 45.0%
ATCAGCAAGTTCCCACATTC+AGG + Chr5:5785657-5785676 MsG0580024507.01.T01:intron 45.0%
CAACGAGTTTGTGAGAATCG+AGG - Chr5:5785021-5785040 None:intergenic 45.0%
CTAACAGTCACCCTGAATGT+GGG - Chr5:5785671-5785690 None:intergenic 45.0%
GAGAGAATGAAACCTGTCAC+CGG - Chr5:5785059-5785078 None:intergenic 45.0%
GCGCCAGTATAGTTGCAATT+TGG + Chr5:5785617-5785636 MsG0580024507.01.T01:intron 45.0%
GCTGATTAGTGCTTGAGGAA+AGG + Chr5:5786986-5787005 MsG0580024507.01.T01:three_prime_UTR 45.0%
GCTGGTTATGACAAAGAGAC+AGG + Chr5:5786447-5786466 MsG0580024507.01.T01:CDS 45.0%
TAGTGAGAGGGATCCCATTA+CGG - Chr5:5785196-5785215 None:intergenic 45.0%
TCAATCCAACGGTCACCATA+TGG + Chr5:5785776-5785795 MsG0580024507.01.T01:intron 45.0%
TCAGCAAGTTCCCACATTCA+GGG + Chr5:5785658-5785677 MsG0580024507.01.T01:intron 45.0%
TCTGTGAACATCCTTCTTGC+TGG + Chr5:5786429-5786448 MsG0580024507.01.T01:CDS 45.0%
TTGAACACTTGGGGTCTGTT+TGG - Chr5:5786225-5786244 None:intergenic 45.0%
TTTAGCCATATGGTGACCGT+TGG - Chr5:5785784-5785803 None:intergenic 45.0%
! ATGGTGCAAGAGAGTATGCA+TGG + Chr5:5786691-5786710 MsG0580024507.01.T01:CDS 45.0%
! TTTTCCCCTCTTTCTCTTGG+TGG + Chr5:5786820-5786839 MsG0580024507.01.T01:three_prime_UTR 45.0%
ATACTGGCGCTGTAGCATAG+CGG - Chr5:5785607-5785626 None:intergenic 50.0%
ATGGACAGACACTACCACAG+TGG + Chr5:5786561-5786580 MsG0580024507.01.T01:CDS 50.0%
CACAAACTCGTTGCTGCTAG+CGG + Chr5:5785028-5785047 MsG0580024507.01.T01:CDS 50.0%
CACTAATCAGCACTGCCTTG+AGG - Chr5:5786977-5786996 None:intergenic 50.0%
CATCGTCGGACTCAATCCAA+CGG + Chr5:5785765-5785784 MsG0580024507.01.T01:intron 50.0%
CCACATTCAGGGTGACTGTT+AGG + Chr5:5785669-5785688 MsG0580024507.01.T01:intron 50.0%
CCTAACAGTCACCCTGAATG+TGG - Chr5:5785672-5785691 None:intergenic 50.0%
CTACCACAGTGGAATGTCTG+TGG + Chr5:5786572-5786591 MsG0580024507.01.T01:CDS 50.0%
CTTCCACAGACATTCCACTG+TGG - Chr5:5786578-5786597 None:intergenic 50.0%
GCTGCTGCTAATTTCACTCG+TGG + Chr5:5785221-5785240 MsG0580024507.01.T01:CDS 50.0%
TGCATGGCGTCAATCAGTGA+AGG + Chr5:5786707-5786726 MsG0580024507.01.T01:CDS 50.0%
!! GCAGTGCTGATTAGTGCTTG+AGG + Chr5:5786981-5787000 MsG0580024507.01.T01:three_prime_UTR 50.0%
CAGCAGCAGCAGTAGTGAGA+GGG - Chr5:5785208-5785227 None:intergenic 55.0%
GCAGCAGCAGCAGTAGTGAG+AGG - Chr5:5785209-5785228 None:intergenic 60.0%
GTTGCTGCTAGCGGAGAACC+CGG + Chr5:5785037-5785056 MsG0580024507.01.T01:CDS 60.0%
ACTCGCTACTGCGCTCCGCA+AGG + Chr5:5785247-5785266 MsG0580024507.01.T01:CDS 65.0%
CTAGCGGAGAACCCGGTGAC+AGG + Chr5:5785044-5785063 MsG0580024507.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 5784799 5787105 5784799 ID=MsG0580024507.01;Name=MsG0580024507.01
Chr5 mRNA 5784799 5787105 5784799 ID=MsG0580024507.01.T01;Parent=MsG0580024507.01;Name=MsG0580024507.01.T01;_AED=0.27;_eAED=0.27;_QI=109|1|1|1|1|1|3|353|204
Chr5 exon 5784799 5785065 5784799 ID=MsG0580024507.01.T01:exon:25676;Parent=MsG0580024507.01.T01
Chr5 exon 5785145 5785268 5785145 ID=MsG0580024507.01.T01:exon:25677;Parent=MsG0580024507.01.T01
Chr5 exon 5786420 5787105 5786420 ID=MsG0580024507.01.T01:exon:25678;Parent=MsG0580024507.01.T01
Chr5 five_prime_UTR 5784799 5784907 5784799 ID=MsG0580024507.01.T01:five_prime_utr;Parent=MsG0580024507.01.T01
Chr5 CDS 5784908 5785065 5784908 ID=MsG0580024507.01.T01:cds;Parent=MsG0580024507.01.T01
Chr5 CDS 5785145 5785268 5785145 ID=MsG0580024507.01.T01:cds;Parent=MsG0580024507.01.T01
Chr5 CDS 5786420 5786752 5786420 ID=MsG0580024507.01.T01:cds;Parent=MsG0580024507.01.T01
Chr5 three_prime_UTR 5786753 5787105 5786753 ID=MsG0580024507.01.T01:three_prime_utr;Parent=MsG0580024507.01.T01
Gene Sequence

>MsG0580024507.01.T01

ATGGAATGCGTATTTGGATTAGTAGGAACTGATTTCGCCATCGTAGTAGCTGATACATCTGCAGTACACAGCATCCTCGTACACAAATCAAATGAAGACAAGATCATGTTCCTCGATTCTCACAAACTCGTTGCTGCTAGCGGAGAACCCGGTGACAGGGTTCAGTTTACTGAATACATTCAAAAGAACGTTGCTTTGTATCAATTCCGTAATGGGATCCCTCTCACTACTGCTGCTGCTGCTAATTTCACTCGTGGCGAACTCGCTACTGCGCTCCGCAAGAATCCCTACTCTGTGAACATCCTTCTTGCTGGTTATGACAAAGAGACAGGCCCATCACTATACTATATTGACTACATTGCAACACTTCACAAGCTTGAAAAGGGAGCTTTTGGTTACGGTTCCTATTTTTCACTATCAATGATGGACAGACACTACCACAGTGGAATGTCTGTGGAAGAAGCAATTGATCTTGTTGATAAGTGCATTGCAGAAATCAGATCAAGGTTGGTTGTGGCACCTCCAAACTTTGTTATCAAAATTGTTGACAAGGATGGTGCAAGAGAGTATGCATGGCGTCAATCAGTGAAGGACACTCCTGTTCCTTCAGCTTGA
Protein sequence

>MsG0580024507.01.T01

MECVFGLVGTDFAIVVADTSAVHSILVHKSNEDKIMFLDSHKLVAASGEPGDRVQFTEYIQKNVALYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYIATLHKLEKGAFGYGSYFSLSMMDRHYHSGMSVEEAIDLVDKCIAEIRSRLVVAPPNFVIKIVDKDGAREYAWRQSVKDTPVPSA*