Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046253.01.T01 | XP_003608889.1 | 88.889 | 387 | 26 | 2 | 1 | 370 | 1 | 387 | 0 | 680 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046253.01.T01 | Q93Y35 | 73.902 | 387 | 84 | 2 | 1 | 370 | 1 | 387 | 0 | 574 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046253.01.T01 | G7JMM6 | 88.889 | 387 | 26 | 2 | 1 | 370 | 1 | 387 | 0.0 | 680 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047814.01 | MsG0880046253.01 | 0.808823 | 2.562476e-50 | 1.479979e-47 |
| MsG0080048216.01 | MsG0880046253.01 | 0.801819 | 7.519718e-49 | 3.626017e-46 |
| MsG0080048383.01 | MsG0880046253.01 | 0.816260 | 6.059954e-52 | 4.273350e-49 |
| MsG0080048687.01 | MsG0880046253.01 | 0.803981 | 2.689629e-49 | 1.370651e-46 |
| MsG0080048968.01 | MsG0880046253.01 | 0.845102 | 5.006830e-59 | 8.254130e-56 |
| MsG0180000055.01 | MsG0880046253.01 | 0.822702 | 2.056069e-53 | 1.733974e-50 |
| MsG0180000135.01 | MsG0880046253.01 | 0.865549 | 5.447548e-65 | 1.779408e-61 |
| MsG0180000235.01 | MsG0880046253.01 | 0.806872 | 6.659923e-50 | 3.655375e-47 |
| MsG0180000339.01 | MsG0880046253.01 | 0.856304 | 3.523151e-62 | 8.370588e-59 |
| MsG0180000611.01 | MsG0880046253.01 | 0.845613 | 3.640454e-59 | 6.100589e-56 |
| MsG0180000799.01 | MsG0880046253.01 | 0.843599 | 1.268760e-58 | 1.995299e-55 |
| MsG0180000882.01 | MsG0880046253.01 | 0.812948 | 3.278842e-51 | 2.112865e-48 |
| MsG0180001237.01 | MsG0880046253.01 | 0.810212 | 1.289334e-50 | 7.725458e-48 |
| MsG0180001260.01 | MsG0880046253.01 | 0.850946 | 1.222135e-60 | 2.434334e-57 |
| MsG0180001599.01 | MsG0880046253.01 | 0.880212 | 6.611828e-70 | 3.693155e-66 |
| MsG0180002283.01 | MsG0880046253.01 | 0.813662 | 2.284958e-51 | 1.501279e-48 |
| MsG0180002489.01 | MsG0880046253.01 | 0.810241 | 1.270923e-50 | 7.621315e-48 |
| MsG0180002491.01 | MsG0880046253.01 | 0.817476 | 3.233700e-52 | 2.357504e-49 |
| MsG0880044990.01 | MsG0880046253.01 | 0.838099 | 3.515645e-57 | 4.660086e-54 |
| MsG0880045106.01 | MsG0880046253.01 | 0.803642 | 3.163053e-49 | 1.597836e-46 |
| MsG0880045619.01 | MsG0880046253.01 | 0.915861 | 3.557768e-85 | 9.499878e-81 |
| MsG0880045656.01 | MsG0880046253.01 | 0.861504 | 9.792904e-64 | 2.777366e-60 |
| MsG0880045869.01 | MsG0880046253.01 | 0.823089 | 1.670910e-53 | 1.424693e-50 |
| MsG0880046068.01 | MsG0880046253.01 | 0.806636 | 7.472949e-50 | 4.076394e-47 |
| MsG0880046074.01 | MsG0880046253.01 | 0.801193 | 1.010411e-48 | 4.795717e-46 |
| MsG0880046113.01 | MsG0880046253.01 | 0.830527 | 2.792391e-55 | 2.949549e-52 |
| MsG0880046177.01 | MsG0880046253.01 | 0.829805 | 4.192232e-55 | 4.337515e-52 |
| MsG0880046253.01 | MsG0880047428.01 | 0.817168 | 3.792518e-52 | 2.741553e-49 |
| MsG0880046253.01 | MsG0880047607.01 | 0.801686 | 8.009518e-49 | 3.848950e-46 |
| MsG0180003627.01 | MsG0880046253.01 | 0.871825 | 5.086482e-67 | 2.080546e-63 |
| MsG0180003693.01 | MsG0880046253.01 | 0.811388 | 7.179927e-51 | 4.438383e-48 |
| MsG0180003744.01 | MsG0880046253.01 | 0.873053 | 1.980328e-67 | 8.475653e-64 |
| MsG0180004009.01 | MsG0880046253.01 | 0.809596 | 1.750039e-50 | 1.031865e-47 |
| MsG0180004016.01 | MsG0880046253.01 | 0.843252 | 1.571070e-58 | 2.443596e-55 |
| MsG0180004128.01 | MsG0880046253.01 | 0.879847 | 8.922145e-70 | 4.913859e-66 |
| MsG0180004130.01 | MsG0880046253.01 | 0.824405 | 8.215989e-54 | 7.269900e-51 |
| MsG0180004598.01 | MsG0880046253.01 | 0.818148 | 2.279723e-52 | 1.692842e-49 |
| MsG0180004767.01 | MsG0880046253.01 | 0.889500 | 2.290767e-73 | 1.852945e-69 |
| MsG0180004991.01 | MsG0880046253.01 | 0.821155 | 4.693400e-53 | 3.788434e-50 |
| MsG0180005268.01 | MsG0880046253.01 | 0.808147 | 3.572750e-50 | 2.027283e-47 |
| MsG0180005407.01 | MsG0880046253.01 | 0.843554 | 1.304664e-58 | 2.048782e-55 |
| MsG0180005765.01 | MsG0880046253.01 | 0.824937 | 6.157892e-54 | 5.533487e-51 |
| MsG0180005944.01 | MsG0880046253.01 | 0.800804 | 1.213475e-48 | 5.702882e-46 |
| MsG0180006013.01 | MsG0880046253.01 | 0.810364 | 1.195941e-50 | 7.194838e-48 |
| MsG0180006155.01 | MsG0880046253.01 | 0.813973 | 1.951383e-51 | 1.292922e-48 |
| MsG0280006305.01 | MsG0880046253.01 | 0.828171 | 1.042671e-54 | 1.028354e-51 |
| MsG0780040312.01 | MsG0880046253.01 | 0.824213 | 9.119228e-54 | 8.025567e-51 |
| MsG0780040329.01 | MsG0880046253.01 | 0.815507 | 8.922549e-52 | 6.163523e-49 |
| MsG0780040338.01 | MsG0880046253.01 | 0.843858 | 1.082164e-58 | 1.715743e-55 |
| MsG0780040411.01 | MsG0880046253.01 | 0.821761 | 3.399441e-53 | 2.790854e-50 |
| MsG0780040519.01 | MsG0880046253.01 | 0.848569 | 5.637384e-60 | 1.038916e-56 |
| MsG0780040718.01 | MsG0880046253.01 | 0.828438 | 8.989890e-55 | 8.935886e-52 |
| MsG0780040845.01 | MsG0880046253.01 | 0.862626 | 4.435708e-64 | 1.307462e-60 |
| MsG0780040856.01 | MsG0880046253.01 | 0.843501 | 1.347823e-58 | 2.112980e-55 |
| MsG0780041423.01 | MsG0880046253.01 | 0.824143 | 9.467346e-54 | 8.315638e-51 |
| MsG0780041490.01 | MsG0880046253.01 | 0.849034 | 4.189303e-60 | 7.839110e-57 |
| MsG0880042017.01 | MsG0880046253.01 | 0.872784 | 2.437928e-67 | 1.033093e-63 |
| MsG0880042848.01 | MsG0880046253.01 | 0.874542 | 6.227633e-68 | 2.813680e-64 |
| MsG0880043162.01 | MsG0880046253.01 | 0.806505 | 7.964061e-50 | 4.329999e-47 |
| MsG0880043532.01 | MsG0880046253.01 | 0.802751 | 4.834294e-49 | 2.387128e-46 |
| MsG0880043770.01 | MsG0880046253.01 | 0.827055 | 1.932249e-54 | 1.844583e-51 |
| MsG0280010801.01 | MsG0880046253.01 | 0.863758 | 1.980189e-64 | 6.071836e-61 |
| MsG0280011141.01 | MsG0880046253.01 | 0.848369 | 6.404746e-60 | 1.172758e-56 |
| MsG0280011220.01 | MsG0880046253.01 | 0.821686 | 3.538334e-53 | 2.898835e-50 |
| MsG0380014330.01 | MsG0880046253.01 | 0.817632 | 2.981962e-52 | 2.183142e-49 |
| MsG0380014489.01 | MsG0880046253.01 | 0.807175 | 5.747904e-50 | 3.179637e-47 |
| MsG0380014539.01 | MsG0880046253.01 | 0.805850 | 1.094034e-49 | 5.849903e-47 |
| MsG0380014885.01 | MsG0880046253.01 | 0.811935 | 5.457217e-51 | 3.422696e-48 |
| MsG0680031507.01 | MsG0880046253.01 | 0.829582 | 4.750004e-55 | 4.881859e-52 |
| MsG0680031508.01 | MsG0880046253.01 | 0.836050 | 1.174158e-56 | 1.462532e-53 |
| MsG0680031699.01 | MsG0880046253.01 | 0.857695 | 1.369659e-62 | 3.409916e-59 |
| MsG0680032770.01 | MsG0880046253.01 | 0.801706 | 7.933627e-49 | 3.814457e-46 |
| MsG0680034671.01 | MsG0880046253.01 | 0.806646 | 7.436436e-50 | 4.057460e-47 |
| MsG0680035306.01 | MsG0880046253.01 | 0.848375 | 6.379112e-60 | 1.168259e-56 |
| MsG0680035574.01 | MsG0880046253.01 | 0.871727 | 5.482887e-67 | 2.234877e-63 |
| MsG0480018462.01 | MsG0880046253.01 | 0.829763 | 4.291068e-55 | 4.434303e-52 |
| MsG0480019275.01 | MsG0880046253.01 | 0.811341 | 7.349141e-51 | 4.537213e-48 |
| MsG0480019670.01 | MsG0880046253.01 | 0.831030 | 2.102889e-55 | 2.254425e-52 |
| MsG0480020530.01 | MsG0880046253.01 | 0.818788 | 1.632571e-52 | 1.233906e-49 |
| MsG0480020959.01 | MsG0880046253.01 | 0.807478 | 4.957021e-50 | 2.763862e-47 |
| MsG0480021006.01 | MsG0880046253.01 | 0.820317 | 7.312270e-53 | 5.766308e-50 |
| MsG0480021240.01 | MsG0880046253.01 | 0.802172 | 6.363935e-49 | 3.096299e-46 |
| MsG0480021432.01 | MsG0880046253.01 | 0.806314 | 8.734373e-50 | 4.725807e-47 |
| MsG0480021832.01 | MsG0880046253.01 | 0.864193 | 1.450289e-64 | 4.514365e-61 |
| MsG0480021914.01 | MsG0880046253.01 | 0.844228 | 8.609817e-59 | 1.380893e-55 |
| MsG0480022292.01 | MsG0880046253.01 | 0.853253 | 2.699945e-61 | 5.797783e-58 |
| MsG0480022678.01 | MsG0880046253.01 | 0.877032 | 8.699622e-69 | 4.310044e-65 |
| MsG0480022897.01 | MsG0880046253.01 | 0.813860 | 2.066950e-51 | 1.365287e-48 |
| MsG0480023149.01 | MsG0880046253.01 | 0.851615 | 7.910326e-61 | 1.610125e-57 |
| MsG0480023240.01 | MsG0880046253.01 | 0.845036 | 5.214992e-59 | 8.580053e-56 |
| MsG0480023258.01 | MsG0880046253.01 | 0.831465 | 1.644360e-55 | 1.785861e-52 |
| MsG0480023412.01 | MsG0880046253.01 | 0.866763 | 2.247047e-65 | 7.661736e-62 |
| MsG0480023415.01 | MsG0880046253.01 | 0.832017 | 1.201244e-55 | 1.326144e-52 |
| MsG0480023447.01 | MsG0880046253.01 | 0.808040 | 3.765282e-50 | 2.130383e-47 |
| MsG0480023554.01 | MsG0880046253.01 | 0.802292 | 6.013136e-49 | 2.934653e-46 |
| MsG0480023559.01 | MsG0880046253.01 | 0.851050 | 1.141956e-60 | 2.282206e-57 |
| MsG0580024353.01 | MsG0880046253.01 | 0.822998 | 1.754284e-53 | 1.491903e-50 |
| MsG0580024536.01 | MsG0880046253.01 | 0.856806 | 2.507677e-62 | 6.057073e-59 |
| MsG0580024792.01 | MsG0880046253.01 | 0.824429 | 8.110184e-54 | 7.181380e-51 |
| MsG0580025134.01 | MsG0880046253.01 | 0.811568 | 6.561371e-51 | 4.075439e-48 |
| MsG0580025408.01 | MsG0880046253.01 | 0.855574 | 5.757155e-62 | 1.335093e-58 |
| MsG0580025414.01 | MsG0880046253.01 | 0.817343 | 3.463202e-52 | 2.515541e-49 |
| MsG0580025421.01 | MsG0880046253.01 | 0.806790 | 6.932673e-50 | 3.796944e-47 |
| MsG0580025986.01 | MsG0880046253.01 | 0.800191 | 1.618159e-48 | 7.487340e-46 |
| MsG0380015444.01 | MsG0880046253.01 | 0.877534 | 5.817368e-69 | 2.935139e-65 |
| MsG0380015512.01 | MsG0880046253.01 | 0.851741 | 7.282103e-61 | 1.488397e-57 |
| MsG0380015607.01 | MsG0880046253.01 | 0.808366 | 3.208450e-50 | 1.831154e-47 |
| MsG0380015818.01 | MsG0880046253.01 | 0.820812 | 5.627962e-53 | 4.499628e-50 |
| MsG0380016513.01 | MsG0880046253.01 | 0.806500 | 7.983573e-50 | 4.340021e-47 |
| MsG0380016636.01 | MsG0880046253.01 | 0.833685 | 4.627044e-56 | 5.367941e-53 |
| MsG0380016971.01 | MsG0880046253.01 | 0.834624 | 2.690702e-56 | 3.210920e-53 |
| MsG0380017003.01 | MsG0880046253.01 | 0.832254 | 1.049738e-55 | 1.166812e-52 |
| MsG0380017146.01 | MsG0880046253.01 | 0.808623 | 2.827861e-50 | 1.624622e-47 |
| MsG0380017285.01 | MsG0880046253.01 | 0.802523 | 5.387147e-49 | 2.644513e-46 |
| MsG0380017330.01 | MsG0880046253.01 | 0.823884 | 1.089191e-53 | 9.497778e-51 |
| MsG0380017375.01 | MsG0880046253.01 | 0.808915 | 2.449026e-50 | 1.417876e-47 |
| MsG0380017476.01 | MsG0880046253.01 | 0.820794 | 5.680750e-53 | 4.539554e-50 |
| MsG0380017719.01 | MsG0880046253.01 | 0.809796 | 1.584704e-50 | 9.393526e-48 |
| MsG0380017864.01 | MsG0880046253.01 | 0.800722 | 1.261068e-48 | 5.914250e-46 |
| MsG0480018084.01 | MsG0880046253.01 | 0.822139 | 2.778512e-53 | 2.305850e-50 |
| MsG0580026225.01 | MsG0880046253.01 | 0.836029 | 1.188759e-56 | 1.479691e-53 |
| MsG0580027043.01 | MsG0880046253.01 | 0.800979 | 1.117573e-48 | 5.276031e-46 |
| MsG0580027892.01 | MsG0880046253.01 | 0.801919 | 7.174156e-49 | 3.468048e-46 |
| MsG0580029132.01 | MsG0880046253.01 | 0.836703 | 8.012591e-57 | 1.017803e-53 |
| MsG0580029283.01 | MsG0880046253.01 | 0.858469 | 8.067264e-63 | 2.060995e-59 |
| MsG0580029300.01 | MsG0880046253.01 | 0.845030 | 5.235453e-59 | 8.611966e-56 |
| MsG0580029629.01 | MsG0880046253.01 | 0.809516 | 1.820643e-50 | 1.071161e-47 |
| MsG0580029658.01 | MsG0880046253.01 | 0.816700 | 4.831188e-52 | 3.447808e-49 |
| MsG0580029783.01 | MsG0880046253.01 | 0.822863 | 1.886214e-53 | 1.598011e-50 |
| MsG0580030003.01 | MsG0880046253.01 | 0.855385 | 6.535364e-62 | 1.506355e-58 |
| MsG0580030160.01 | MsG0880046253.01 | 0.802207 | 6.258492e-49 | 3.047640e-46 |
| MsG0580030204.01 | MsG0880046253.01 | 0.814060 | 1.867127e-51 | 1.240040e-48 |
| MsG0280006595.01 | MsG0880046253.01 | 0.825424 | 4.722999e-54 | 4.303016e-51 |
| MsG0280006759.01 | MsG0880046253.01 | 0.840482 | 8.466682e-58 | 1.207634e-54 |
| MsG0280006892.01 | MsG0880046253.01 | 0.804869 | 1.756424e-49 | 9.158230e-47 |
| MsG0280006949.01 | MsG0880046253.01 | 0.854514 | 1.170248e-61 | 2.620177e-58 |
| MsG0280007161.01 | MsG0880046253.01 | 0.821413 | 4.091734e-53 | 3.326533e-50 |
| MsG0280007440.01 | MsG0880046253.01 | 0.804360 | 2.242828e-49 | 1.154088e-46 |
| MsG0280007441.01 | MsG0880046253.01 | 0.860543 | 1.919881e-63 | 5.267080e-60 |
| MsG0280007585.01 | MsG0880046253.01 | 0.817680 | 2.908767e-52 | 2.132382e-49 |
| MsG0280007645.01 | MsG0880046253.01 | 0.801186 | 1.014134e-48 | 4.812403e-46 |
| MsG0280008118.01 | MsG0880046253.01 | 0.816091 | 6.611036e-52 | 4.640306e-49 |
| MsG0280008134.01 | MsG0880046253.01 | 0.845155 | 4.844713e-59 | 7.999945e-56 |
| MsG0280008312.01 | MsG0880046253.01 | 0.831852 | 1.319397e-55 | 1.449643e-52 |
| MsG0280008327.01 | MsG0880046253.01 | 0.806608 | 7.574278e-50 | 4.128852e-47 |
| MsG0280008502.01 | MsG0880046253.01 | 0.814784 | 1.291348e-51 | 8.745958e-49 |
| MsG0280009111.01 | MsG0880046253.01 | 0.811536 | 6.666368e-51 | 4.137291e-48 |
| MsG0280009356.01 | MsG0880046253.01 | 0.813813 | 2.116399e-51 | 1.396247e-48 |
| MsG0280009375.01 | MsG0880046253.01 | 0.807248 | 5.546712e-50 | 3.074225e-47 |
| MsG0280009575.01 | MsG0880046253.01 | 0.862724 | 4.137116e-64 | 1.223859e-60 |
| MsG0680035848.01 | MsG0880046253.01 | 0.828356 | 9.408259e-55 | 9.329018e-52 |
| MsG0680035854.01 | MsG0880046253.01 | 0.850513 | 1.618145e-60 | 3.177057e-57 |
| MsG0780036240.01 | MsG0880046253.01 | 0.842825 | 2.041217e-58 | 3.132380e-55 |
| MsG0780037755.01 | MsG0880046253.01 | 0.801968 | 7.010612e-49 | 3.393084e-46 |
| MsG0780038565.01 | MsG0880046253.01 | 0.837817 | 4.155622e-57 | 5.461739e-54 |
| MsG0780038587.01 | MsG0880046253.01 | 0.819311 | 1.241605e-52 | 9.519921e-50 |
| MsG0780039340.01 | MsG0880046253.01 | 0.856421 | 3.255130e-62 | 7.765527e-59 |
| MsG0780039570.01 | MsG0880046253.01 | 0.802866 | 4.577907e-49 | 2.267086e-46 |
| MsG0780039845.01 | MsG0880046253.01 | 0.814724 | 1.331796e-51 | 9.005553e-49 |
| MsG0780039943.01 | MsG0880046253.01 | 0.855743 | 5.139880e-62 | 1.198744e-58 |
| MsG0780040125.01 | MsG0880046253.01 | 0.859645 | 3.584260e-63 | 9.533656e-60 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046253.01.T01 | MTR_4g104080 | 88.889 | 387 | 26 | 2 | 1 | 370 | 1 | 387 | 0.0 | 680 |
| MsG0880046253.01.T01 | MTR_8g046560 | 69.751 | 281 | 49 | 6 | 86 | 349 | 260 | 521 | 2.00e-114 | 343 |
| MsG0880046253.01.T01 | MTR_8g464820 | 77.990 | 209 | 26 | 4 | 96 | 286 | 160 | 366 | 6.82e-103 | 308 |
| MsG0880046253.01.T01 | MTR_8g432630 | 27.273 | 198 | 142 | 2 | 159 | 354 | 219 | 416 | 2.17e-18 | 86.7 |
| MsG0880046253.01.T01 | MTR_7g076160 | 26.396 | 197 | 143 | 1 | 160 | 354 | 218 | 414 | 3.62e-18 | 85.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046253.01.T01 | AT4G24820 | 73.902 | 387 | 84 | 2 | 1 | 370 | 1 | 387 | 0.0 | 574 |
| MsG0880046253.01.T01 | AT4G24820 | 73.902 | 387 | 84 | 2 | 1 | 370 | 1 | 387 | 0.0 | 574 |
| MsG0880046253.01.T01 | AT3G61140 | 27.778 | 198 | 141 | 2 | 160 | 355 | 216 | 413 | 5.10e-18 | 85.5 |
Find 80 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTTGGATGTTCATTAATT+TGG | 0.090197 | 8:+71087813 | None:intergenic |
| CAAGAAGTCTCCTTGCTTAA+TGG | 0.172394 | 8:+71088005 | None:intergenic |
| CGATCACACGAGACAGTTTC+TGG | 0.218957 | 8:+71087971 | None:intergenic |
| ACATTGCAGCTTGGTTTCTT+TGG | 0.250558 | 8:-71089128 | MsG0880046253.01.T01:CDS |
| TTACTTGTTGGTGATAGATT+TGG | 0.257933 | 8:-71091447 | None:intergenic |
| TACTTGTTGGTGATAGATTT+GGG | 0.286588 | 8:-71091446 | None:intergenic |
| CCTAGTTGCTGATTCCGTTT+TGG | 0.319218 | 8:-71091161 | MsG0880046253.01.T01:CDS |
| TGCTTGGTAAAGAGCATTCT+TGG | 0.319346 | 8:+71088029 | None:intergenic |
| GTAAAATATAAAGGTGTCAT+AGG | 0.319394 | 8:+71088822 | None:intergenic |
| GAAGGCGGCCACATTGTTCT+TGG | 0.328664 | 8:-71088881 | MsG0880046253.01.T01:CDS |
| GGATATGGATCGTGTCCTTT+TGG | 0.338072 | 8:-71091140 | MsG0880046253.01.T01:CDS |
| GCAACTAGGGTTTCGTATAA+AGG | 0.342274 | 8:+71091175 | None:intergenic |
| AAAGCATTGACAAAGCTAAA+AGG | 0.352604 | 8:-71089083 | MsG0880046253.01.T01:intron |
| TAAAGAGCATTCTTGGCATC+AGG | 0.380008 | 8:+71088036 | None:intergenic |
| AAGTCTTTCTTCTCAGCATT+TGG | 0.381841 | 8:-71088555 | MsG0880046253.01.T01:intron |
| CTTGAACATCTTGTTGTTTG+AGG | 0.383548 | 8:+71091339 | None:intergenic |
| CAAAACGGTGTAAAATATAA+AGG | 0.388515 | 8:+71088813 | None:intergenic |
| AAGGAGACTTCTTGTTGAAC+AGG | 0.394711 | 8:-71087996 | MsG0880046253.01.T01:CDS |
| TGTAAGATTGATAAAGTTGC+AGG | 0.396057 | 8:-71088078 | MsG0880046253.01.T01:CDS |
| TTTGCATCGCATCGCGTCAA+TGG | 0.397473 | 8:-71091420 | MsG0880046253.01.T01:exon |
| GAAGCCATGGCAAAAGCGTT+TGG | 0.405490 | 8:-71088262 | MsG0880046253.01.T01:CDS |
| TCAATCACTGTCAAGATCTC+AGG | 0.407014 | 8:+71088630 | None:intergenic |
| GTCTCGTGTGATCGATCTTT+AGG | 0.409640 | 8:-71087962 | MsG0880046253.01.T01:exon |
| CTTGTATTGACAACCATATA+AGG | 0.412125 | 8:+71088575 | None:intergenic |
| GCTATTTGCATCCACACTTC+CGG | 0.415118 | 8:-71088354 | MsG0880046253.01.T01:CDS |
| AAAACGACAAACTCAATCAT+AGG | 0.416056 | 8:+71087694 | None:intergenic |
| CTCCTTGCTTAATGGTTGCT+TGG | 0.422700 | 8:+71088013 | None:intergenic |
| TCATTAATTTGGAAATCAAA+TGG | 0.426282 | 8:+71087824 | None:intergenic |
| CAGAGTTTCCTTAAAACAAA+AGG | 0.442207 | 8:-71088770 | MsG0880046253.01.T01:intron |
| CCAACTTAATTTGCTCCGTC+AGG | 0.445020 | 8:+71088380 | None:intergenic |
| CAACTAGGGTTTCGTATAAA+GGG | 0.448981 | 8:+71091176 | None:intergenic |
| CCAAAACGGAATCAGCAACT+AGG | 0.455755 | 8:+71091161 | None:intergenic |
| GCAGCTTGGTTTCTTTGGCA+TGG | 0.461721 | 8:-71089123 | MsG0880046253.01.T01:CDS |
| TGTTTGAAGAAGGTGGTGAC+TGG | 0.465631 | 8:-71088966 | MsG0880046253.01.T01:CDS |
| TGTTATTATGCTGGTCAAAA+CGG | 0.481534 | 8:+71088798 | None:intergenic |
| AAGAAGGTGGTGACTGGGAA+AGG | 0.487909 | 8:-71088960 | MsG0880046253.01.T01:CDS |
| TGAAGTTCGTGAGGCTCACT+TGG | 0.496675 | 8:-71089346 | MsG0880046253.01.T01:CDS |
| TTTGAGGAGGAAAAGCTTGT+CGG | 0.496982 | 8:+71091355 | None:intergenic |
| TATGACAGCTTGTTTGAAGA+AGG | 0.509351 | 8:-71088976 | MsG0880046253.01.T01:intron |
| GTATTCTATACATTGCAGCT+TGG | 0.510078 | 8:-71089137 | MsG0880046253.01.T01:CDS |
| ATACATACCTTGTCCCCATC+CGG | 0.510632 | 8:+71089304 | None:intergenic |
| TGTTGCAGTTGGGCAGAAGA+TGG | 0.511519 | 8:-71089165 | MsG0880046253.01.T01:intron |
| TTTGACCAGCATAATAACAT+TGG | 0.511922 | 8:-71088794 | MsG0880046253.01.T01:CDS |
| TTCAATTTCGTCAAGGAACA+TGG | 0.512182 | 8:-71091284 | MsG0880046253.01.T01:intron |
| TGATCTCTCTCATGTAATAC+CGG | 0.514625 | 8:+71088335 | None:intergenic |
| TCTGTCCAATGTTATTATGC+TGG | 0.519046 | 8:+71088789 | None:intergenic |
| GTGACTGGGAAAGGAAGAAT+AGG | 0.520244 | 8:-71088951 | MsG0880046253.01.T01:CDS |
| TTGAGATGATTCGATCAGCT+TGG | 0.534191 | 8:+71087797 | None:intergenic |
| GCTGATGCCGAGGAAAACTT+AGG | 0.544982 | 8:-71089375 | MsG0880046253.01.T01:CDS |
| TAAAATATAAAGGTGTCATA+GGG | 0.545376 | 8:+71088823 | None:intergenic |
| CAGAGATACCGACAGTATCA+AGG | 0.545935 | 8:-71087903 | MsG0880046253.01.T01:three_prime_UTR |
| GACACGATCCATATCCAAAA+CGG | 0.546950 | 8:+71091147 | None:intergenic |
| CCTGACGGAGCAAATTAAGT+TGG | 0.551415 | 8:-71088380 | MsG0880046253.01.T01:CDS |
| TAGCACGCATGGAGTCCAAA+AGG | 0.551715 | 8:+71091125 | None:intergenic |
| ATAGGTAGTAAAGGTTGAGA+TGG | 0.554018 | 8:+71088855 | None:intergenic |
| CAAAACGGAATCAGCAACTA+GGG | 0.569243 | 8:+71091162 | None:intergenic |
| GAGTGTGACAATTGAAGCCA+TGG | 0.570854 | 8:-71088275 | MsG0880046253.01.T01:CDS |
| ATCGCGTCAATGGCAAATGA+AGG | 0.573429 | 8:-71091410 | MsG0880046253.01.T01:exon |
| CTCATGTAATACCGGAAGTG+TGG | 0.574056 | 8:+71088343 | None:intergenic |
| ATTCATTTCAGCTGGCCTGA+CGG | 0.578789 | 8:-71088395 | MsG0880046253.01.T01:intron |
| AATAGGCTGAAAGTGTATGA+AGG | 0.580095 | 8:-71088934 | MsG0880046253.01.T01:CDS |
| AAAGAGCATTCTTGGCATCA+GGG | 0.589008 | 8:+71088037 | None:intergenic |
| GAACATCTTGTTGTTTGAGG+AGG | 0.589500 | 8:+71091342 | None:intergenic |
| TACCAAGCAACCATTAAGCA+AGG | 0.592283 | 8:-71088015 | MsG0880046253.01.T01:CDS |
| GTTTGAAGAAGGTGGTGACT+GGG | 0.592873 | 8:-71088965 | MsG0880046253.01.T01:CDS |
| TTCGAGTGGACATGCAGTAG+AGG | 0.594533 | 8:+71088911 | None:intergenic |
| GCTGCAATGTATAGAATACC+AGG | 0.602890 | 8:+71089141 | None:intergenic |
| GGAGGAAAAGCTTGTCGGCG+AGG | 0.605693 | 8:+71091360 | None:intergenic |
| CACTCGAAATTTCGAGAAGG+CGG | 0.611108 | 8:-71088896 | MsG0880046253.01.T01:CDS |
| CGCCTTCTCGAAATTTCGAG+TGG | 0.620270 | 8:+71088897 | None:intergenic |
| TTGTCGGCGAGGACAAGTTG+TGG | 0.627071 | 8:+71091371 | None:intergenic |
| ACAGATGTCCTTGATACTGT+CGG | 0.642655 | 8:+71087895 | None:intergenic |
| AAAAGCGTTTGGAGTATCTG+TGG | 0.655763 | 8:-71088251 | MsG0880046253.01.T01:CDS |
| GGAAGTGTGGATGCAAATAG+CGG | 0.661860 | 8:+71088356 | None:intergenic |
| AGGTGAGAGTGAAGTTCGTG+AGG | 0.662611 | 8:-71089355 | MsG0880046253.01.T01:CDS |
| GTCCACTCGAAATTTCGAGA+AGG | 0.663292 | 8:-71088899 | MsG0880046253.01.T01:CDS |
| AGTTGGGCAGAAGATGGACC+TGG | 0.674047 | 8:-71089159 | MsG0880046253.01.T01:CDS |
| GACAGCTTGTTTGAAGAAGG+TGG | 0.675197 | 8:-71088973 | MsG0880046253.01.T01:intron |
| GAGCATTCTTGGCATCAGGG+CGG | 0.729040 | 8:+71088040 | None:intergenic |
| GATGGAATCCAAGAACAATG+TGG | 0.760047 | 8:+71088873 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTCAAATTATTTTTTTGAA+CGG | - | Chr8:71091359-71091378 | MsG0880046253.01.T01:CDS | 10.0% |
| !! | TCAATAAATACATATCTTAA+TGG | - | Chr8:71089074-71089093 | MsG0880046253.01.T01:intron | 15.0% |
| !!! | TACACTTTTTAAACATAAAA+TGG | + | Chr8:71091193-71091212 | None:intergenic | 15.0% |
| !! | AAAATCCAAAATTCACAATT+GGG | + | Chr8:71088097-71088116 | None:intergenic | 20.0% |
| !! | ACAATATGTAAAATAAACTC+TGG | + | Chr8:71088702-71088721 | None:intergenic | 20.0% |
| !! | ATATATCCTAGAAAGATTAA+TGG | + | Chr8:71089488-71089507 | None:intergenic | 20.0% |
| !! | ATTACATATATTTGTTTCCA+GGG | - | Chr8:71090993-71091012 | MsG0880046253.01.T01:intron | 20.0% |
| !! | TATATCCTAGAAAGATTAAT+GGG | + | Chr8:71089487-71089506 | None:intergenic | 20.0% |
| !! | TGAAAAACAAAAGCAAATTA+GGG | + | Chr8:71087923-71087942 | None:intergenic | 20.0% |
| !! | TGAAGAAAATTTGTATAGTA+GGG | - | Chr8:71088135-71088154 | MsG0880046253.01.T01:intron | 20.0% |
| !! | TTGAAGAAAATTTGTATAGT+AGG | - | Chr8:71088134-71088153 | MsG0880046253.01.T01:intron | 20.0% |
| !! | TTGAATTGTACTAATGTATT+TGG | - | Chr8:71088205-71088224 | MsG0880046253.01.T01:intron | 20.0% |
| !!! | CTATAATTTTCTGTTAAGAA+TGG | - | Chr8:71090110-71090129 | MsG0880046253.01.T01:intron | 20.0% |
| !!! | TAAAATATAAAGGTGTCATA+GGG | + | Chr8:71090309-71090328 | None:intergenic | 20.0% |
| !!! | TCATTAATTTGGAAATCAAA+TGG | + | Chr8:71091308-71091327 | None:intergenic | 20.0% |
| ! | AAAAAGTTCATAGGTAGTAA+AGG | + | Chr8:71090286-71090305 | None:intergenic | 25.0% |
| ! | AAATCCAAAATTCACAATTG+GGG | + | Chr8:71088096-71088115 | None:intergenic | 25.0% |
| ! | AACAGAAAATTATAGCACAA+AGG | + | Chr8:71090105-71090124 | None:intergenic | 25.0% |
| ! | AGAAAAGATAAATGGTGTAA+AGG | + | Chr8:71090408-71090427 | None:intergenic | 25.0% |
| ! | ATGTAGAGTGAAGAAAATTA+GGG | + | Chr8:71087898-71087917 | None:intergenic | 25.0% |
| ! | CAAAAACCAGTAAAACATTT+AGG | + | Chr8:71088248-71088267 | None:intergenic | 25.0% |
| ! | CAAAACGGTGTAAAATATAA+AGG | + | Chr8:71090319-71090338 | None:intergenic | 25.0% |
| ! | CAAAATCCAAAATTCACAAT+TGG | + | Chr8:71088098-71088117 | None:intergenic | 25.0% |
| ! | CATTACATATATTTGTTTCC+AGG | - | Chr8:71090992-71091011 | MsG0880046253.01.T01:intron | 25.0% |
| ! | CGGTTAAAAGAAAAGATAAA+TGG | + | Chr8:71090416-71090435 | None:intergenic | 25.0% |
| ! | GTGAAAAACAAAAGCAAATT+AGG | + | Chr8:71087924-71087943 | None:intergenic | 25.0% |
| ! | TATAGAACTAAGCTTATAGT+TGG | - | Chr8:71089002-71089021 | MsG0880046253.01.T01:intron | 25.0% |
| ! | TATGTAGAGTGAAGAAAATT+AGG | + | Chr8:71087899-71087918 | None:intergenic | 25.0% |
| ! | TGATTAGATTACAATGTTGT+GGG | - | Chr8:71090961-71090980 | MsG0880046253.01.T01:intron | 25.0% |
| ! | TTAAACAACCAAGAAAGAAA+AGG | - | Chr8:71089050-71089069 | MsG0880046253.01.T01:intron | 25.0% |
| ! | TTGATTAGATTACAATGTTG+TGG | - | Chr8:71090960-71090979 | MsG0880046253.01.T01:intron | 25.0% |
| ! | TTTACATGATGCTATATCAT+TGG | + | Chr8:71089102-71089121 | None:intergenic | 25.0% |
| !! | AAAAAGTGTATTGCATTGAA+AGG | - | Chr8:71091203-71091222 | MsG0880046253.01.T01:intron | 25.0% |
| !! | AATTCTAGAGATTCTTGAAT+AGG | + | Chr8:71088464-71088483 | None:intergenic | 25.0% |
| !! | ATTCTAGAGATTCTTGAATA+GGG | + | Chr8:71088463-71088482 | None:intergenic | 25.0% |
| !! | TCATATGAATGTCTCATTTT+AGG | - | Chr8:71089728-71089747 | MsG0880046253.01.T01:intron | 25.0% |
| !! | TTATTGATCCTTTTCTTTCT+TGG | + | Chr8:71089061-71089080 | None:intergenic | 25.0% |
| !! | TTTGTTCCTAAATGTTTTAC+TGG | - | Chr8:71088239-71088258 | MsG0880046253.01.T01:CDS | 25.0% |
| !!! | ACTATAAGCTTAGTTCTATA+TGG | + | Chr8:71089002-71089021 | None:intergenic | 25.0% |
| !!! | ATTTTGAAATTCATTTCAGC+TGG | - | Chr8:71090726-71090745 | MsG0880046253.01.T01:intron | 25.0% |
| !!! | CAAAATCCTTATTTTTCATC+CGG | - | Chr8:71089806-71089825 | MsG0880046253.01.T01:intron | 25.0% |
| !!! | GTAAAATATAAAGGTGTCAT+AGG | + | Chr8:71090310-71090329 | None:intergenic | 25.0% |
| !!! | TAGAAGTACCTTTTGTTTTA+AGG | + | Chr8:71090370-71090389 | None:intergenic | 25.0% |
| !!! | TTATTTTACATATTGTGACC+TGG | - | Chr8:71088706-71088725 | MsG0880046253.01.T01:intron | 25.0% |
| AAAACGACAAACTCAATCAT+AGG | + | Chr8:71091438-71091457 | None:intergenic | 30.0% | |
| AAACGAAAAACCAAGTGATT+TGG | + | Chr8:71090932-71090951 | None:intergenic | 30.0% | |
| AAATCGACATATGATCTGAA+TGG | + | Chr8:71088554-71088573 | None:intergenic | 30.0% | |
| AACGAAAAACCAAGTGATTT+GGG | + | Chr8:71090931-71090950 | None:intergenic | 30.0% | |
| AAGTACAAAACCTAGAATAC+TGG | - | Chr8:71089579-71089598 | MsG0880046253.01.T01:intron | 30.0% | |
| ACCAAGAAATAACAGAACAA+CGG | + | Chr8:71090436-71090455 | None:intergenic | 30.0% | |
| AGCTTGGATGTTCATTAATT+TGG | + | Chr8:71091319-71091338 | None:intergenic | 30.0% | |
| AGTACAAAACCTAGAATACT+GGG | - | Chr8:71089580-71089599 | MsG0880046253.01.T01:intron | 30.0% | |
| AGTATAATGAGTCTTTGTTG+GGG | - | Chr8:71088596-71088615 | MsG0880046253.01.T01:CDS | 30.0% | |
| ATAGGCTAAATTTCATCCAT+CGG | + | Chr8:71089444-71089463 | None:intergenic | 30.0% | |
| CAAATAATAGTTGTATCTCG+AGG | + | Chr8:71089671-71089690 | None:intergenic | 30.0% | |
| CAGAGTTTCCTTAAAACAAA+AGG | - | Chr8:71090359-71090378 | MsG0880046253.01.T01:intron | 30.0% | |
| CTTGTAAGATTCCAAAAACT+GGG | + | Chr8:71090835-71090854 | None:intergenic | 30.0% | |
| GAACATAGAAGCAAAAAGAT+AGG | + | Chr8:71090693-71090712 | None:intergenic | 30.0% | |
| GAGTATAATGAGTCTTTGTT+GGG | - | Chr8:71088595-71088614 | MsG0880046253.01.T01:CDS | 30.0% | |
| GTGAAGAAAATTAGGGTTTA+CGG | + | Chr8:71087891-71087910 | None:intergenic | 30.0% | |
| TATGAACTATCGTTAGTACA+AGG | + | Chr8:71089713-71089732 | None:intergenic | 30.0% | |
| TCTTACCCATTAATCTTTCT+AGG | - | Chr8:71089479-71089498 | MsG0880046253.01.T01:intron | 30.0% | |
| TCTTGTAAGATTCCAAAAAC+TGG | + | Chr8:71090836-71090855 | None:intergenic | 30.0% | |
| TGAGTATAATGAGTCTTTGT+TGG | - | Chr8:71088594-71088613 | MsG0880046253.01.T01:CDS | 30.0% | |
| TGCAATTAATATGACACATC+TGG | + | Chr8:71089630-71089649 | None:intergenic | 30.0% | |
| TGTAAGATTGATAAAGTTGC+AGG | - | Chr8:71091051-71091070 | MsG0880046253.01.T01:intron | 30.0% | |
| TGTTATTATGCTGGTCAAAA+CGG | + | Chr8:71090334-71090353 | None:intergenic | 30.0% | |
| TTTGACCAGCATAATAACAT+TGG | - | Chr8:71090335-71090354 | MsG0880046253.01.T01:intron | 30.0% | |
| ! | ACTGTTTCTTTCCTTGATTA+TGG | + | Chr8:71088896-71088915 | None:intergenic | 30.0% |
| ! | AGATGTTTTCAATTTCGTCA+AGG | - | Chr8:71087838-71087857 | MsG0880046253.01.T01:three_prime_UTR | 30.0% |
| ! | ATCAAGGAAAGAAACAGTTT+TGG | - | Chr8:71088898-71088917 | MsG0880046253.01.T01:CDS | 30.0% |
| ! | CAAAACTTTCATTTTCACTC+TGG | - | Chr8:71089238-71089257 | MsG0880046253.01.T01:intron | 30.0% |
| ! | CAGAGTGAAAATGAAAGTTT+TGG | + | Chr8:71089240-71089259 | None:intergenic | 30.0% |
| ! | CTTGTATTGACAACCATATA+AGG | + | Chr8:71090557-71090576 | None:intergenic | 30.0% |
| ! | TCCACATCTTAAAGAGTTTT+TGG | - | Chr8:71090528-71090547 | MsG0880046253.01.T01:intron | 30.0% |
| ! | TCTGTTGAATGCATTTTACT+AGG | - | Chr8:71091252-71091271 | MsG0880046253.01.T01:intron | 30.0% |
| ! | TTAACCCCAATTGTGAATTT+TGG | - | Chr8:71088089-71088108 | MsG0880046253.01.T01:CDS | 30.0% |
| ! | TTAACTGACTAATTTGCATC+AGG | - | Chr8:71090465-71090484 | MsG0880046253.01.T01:intron | 30.0% |
| ! | TTGAATGCATTTTACTAGGT+GGG | - | Chr8:71091256-71091275 | MsG0880046253.01.T01:intron | 30.0% |
| ! | TTTTGGATTTTGAATGCACT+AGG | - | Chr8:71088106-71088125 | MsG0880046253.01.T01:CDS | 30.0% |
| !! | AAAGCATTGACAAAGCTAAA+AGG | - | Chr8:71090046-71090065 | MsG0880046253.01.T01:intron | 30.0% |
| !! | CTTAGTTCTATATGGATGTA+TGG | + | Chr8:71088994-71089013 | None:intergenic | 30.0% |
| !! | TAGAATCACTTTTGAAGATG+TGG | + | Chr8:71089394-71089413 | None:intergenic | 30.0% |
| !! | TCCAAAAACTCTTTAAGATG+TGG | + | Chr8:71090532-71090551 | None:intergenic | 30.0% |
| !! | TGTCATTTATTCCCAGTTTT+TGG | - | Chr8:71090821-71090840 | MsG0880046253.01.T01:intron | 30.0% |
| AAAAACCCCAGAATAAGCAA+GGG | + | Chr8:71088735-71088754 | None:intergenic | 35.0% | |
| AAATAGCAAAGCAACGAAGA+GGG | + | Chr8:71089354-71089373 | None:intergenic | 35.0% | |
| AACTTCAATCAAACTGCTAG+AGG | + | Chr8:71088497-71088516 | None:intergenic | 35.0% | |
| AAGTCTTTCTTCTCAGCATT+TGG | - | Chr8:71090574-71090593 | MsG0880046253.01.T01:intron | 35.0% | |
| ACTTCAATCAAACTGCTAGA+GGG | + | Chr8:71088496-71088515 | None:intergenic | 35.0% | |
| AGAACTAAGCTTATAGTTGG+AGG | - | Chr8:71089005-71089024 | MsG0880046253.01.T01:intron | 35.0% | |
| AGAATAATAACCGCAGAGAT+AGG | + | Chr8:71089462-71089481 | None:intergenic | 35.0% | |
| AGAATAGAAAATGCAAAGGC+TGG | - | Chr8:71089603-71089622 | MsG0880046253.01.T01:intron | 35.0% | |
| ATAGGTAGTAAAGGTTGAGA+TGG | + | Chr8:71090277-71090296 | None:intergenic | 35.0% | |
| CAACTAGGGTTTCGTATAAA+GGG | + | Chr8:71087956-71087975 | None:intergenic | 35.0% | |
| CAGTGAAAAGATTACAACTC+AGG | - | Chr8:71089550-71089569 | MsG0880046253.01.T01:intron | 35.0% | |
| CATGGAAATCACCATAATCA+AGG | - | Chr8:71088882-71088901 | MsG0880046253.01.T01:CDS | 35.0% | |
| GCAGTTTGATTGAAGTTGAA+TGG | - | Chr8:71088500-71088519 | MsG0880046253.01.T01:intron | 35.0% | |
| GTATAATGAGTCTTTGTTGG+GGG | - | Chr8:71088597-71088616 | MsG0880046253.01.T01:CDS | 35.0% | |
| GTATTCTATACATTGCAGCT+TGG | - | Chr8:71089992-71090011 | MsG0880046253.01.T01:intron | 35.0% | |
| GTCATAGGGAAAAAGTTCAT+AGG | + | Chr8:71090295-71090314 | None:intergenic | 35.0% | |
| TAGGCTAAATTTCATCCATC+GGG | + | Chr8:71089443-71089462 | None:intergenic | 35.0% | |
| TATATACCCAATGTCACCAA+TGG | - | Chr8:71088804-71088823 | MsG0880046253.01.T01:CDS | 35.0% | |
| TCCAAACATACTTCTTTAGC+AGG | + | Chr8:71088422-71088441 | None:intergenic | 35.0% | |
| TCTGTCCAATGTTATTATGC+TGG | + | Chr8:71090343-71090362 | None:intergenic | 35.0% | |
| TCTTCAAACAAGCTGTCATA+TGG | + | Chr8:71090153-71090172 | None:intergenic | 35.0% | |
| TGAAATTTAGCCTATCTCTG+CGG | - | Chr8:71089449-71089468 | MsG0880046253.01.T01:intron | 35.0% | |
| TGATCTCTCTCATGTAATAC+CGG | + | Chr8:71090797-71090816 | None:intergenic | 35.0% | |
| TGGGAGAATAGAAAATGCAA+AGG | - | Chr8:71089599-71089618 | MsG0880046253.01.T01:intron | 35.0% | |
| TTAGATTACAATGTTGTGGG+AGG | - | Chr8:71090964-71090983 | MsG0880046253.01.T01:intron | 35.0% | |
| TTCAATTTCGTCAAGGAACA+TGG | - | Chr8:71087845-71087864 | MsG0880046253.01.T01:three_prime_UTR | 35.0% | |
| TTCTATTCTCCCAGTATTCT+AGG | + | Chr8:71089592-71089611 | None:intergenic | 35.0% | |
| ! | AATAGGCTGAAAGTGTATGA+AGG | - | Chr8:71090195-71090214 | MsG0880046253.01.T01:intron | 35.0% |
| ! | ATTTTCATCTGTCAGCTCAA+AGG | + | Chr8:71089204-71089223 | None:intergenic | 35.0% |
| ! | GTTGAATGCATTTTACTAGG+TGG | - | Chr8:71091255-71091274 | MsG0880046253.01.T01:intron | 35.0% |
| ! | TATGACAGCTTGTTTGAAGA+AGG | - | Chr8:71090153-71090172 | MsG0880046253.01.T01:intron | 35.0% |
| ! | TCCTGCTAAAGAAGTATGTT+TGG | - | Chr8:71088418-71088437 | MsG0880046253.01.T01:intron | 35.0% |
| ! | TGAATGCATTTTACTAGGTG+GGG | - | Chr8:71091257-71091276 | MsG0880046253.01.T01:intron | 35.0% |
| !! | ACCGTTGTTCTGTTATTTCT+TGG | - | Chr8:71090432-71090451 | MsG0880046253.01.T01:intron | 35.0% |
| !! | ATCATCAATTTTAGCACGCA+TGG | + | Chr8:71088018-71088037 | None:intergenic | 35.0% |
| !! | CTTGAACATCTTGTTGTTTG+AGG | + | Chr8:71087793-71087812 | None:intergenic | 35.0% |
| !! | GAGTTTTTGGACTCCTTATA+TGG | - | Chr8:71090541-71090560 | MsG0880046253.01.T01:intron | 35.0% |
| !!! | ATCCTTATTTTTCATCCGGA+TGG | - | Chr8:71089810-71089829 | MsG0880046253.01.T01:intron | 35.0% |
| !!! | GCTTTTGTTTTTCACAGACA+TGG | - | Chr8:71087929-71087948 | MsG0880046253.01.T01:three_prime_UTR | 35.0% |
| !!! | TCCTTATTTTTCATCCGGAT+GGG | - | Chr8:71089811-71089830 | MsG0880046253.01.T01:intron | 35.0% |
| !!! | TGTTTTGAGGCTAGCTATTA+TGG | + | Chr8:71088841-71088860 | None:intergenic | 35.0% |
| AAACCAAGACTGTTGCAGTT+GGG | - | Chr8:71089954-71089973 | MsG0880046253.01.T01:intron | 40.0% | |
| AAGGAGACTTCTTGTTGAAC+AGG | - | Chr8:71091133-71091152 | MsG0880046253.01.T01:CDS | 40.0% | |
| ACAGATGTCCTTGATACTGT+CGG | + | Chr8:71091237-71091256 | None:intergenic | 40.0% | |
| ACATTGCAGCTTGGTTTCTT+TGG | - | Chr8:71090001-71090020 | MsG0880046253.01.T01:intron | 40.0% | |
| ATTCTTGAATAGGGAACACG+TGG | + | Chr8:71088454-71088473 | None:intergenic | 40.0% | |
| CAAAACGGAATCAGCAACTA+GGG | + | Chr8:71087970-71087989 | None:intergenic | 40.0% | |
| CAAATAGCAAAGCAACGAAG+AGG | + | Chr8:71089355-71089374 | None:intergenic | 40.0% | |
| CAAGAAGTCTCCTTGCTTAA+TGG | + | Chr8:71091127-71091146 | None:intergenic | 40.0% | |
| CAATGTCACCAATGGCTTAT+GGG | - | Chr8:71088812-71088831 | MsG0880046253.01.T01:CDS | 40.0% | |
| CATGACATCTACCATTCACT+GGG | + | Chr8:71088866-71088885 | None:intergenic | 40.0% | |
| CTTCAATCAAACTGCTAGAG+GGG | + | Chr8:71088495-71088514 | None:intergenic | 40.0% | |
| GAAAAACCCCAGAATAAGCA+AGG | + | Chr8:71088736-71088755 | None:intergenic | 40.0% | |
| GACACGATCCATATCCAAAA+CGG | + | Chr8:71087985-71088004 | None:intergenic | 40.0% | |
| GATGGAATCCAAGAACAATG+TGG | + | Chr8:71090259-71090278 | None:intergenic | 40.0% | |
| GCAACTAGGGTTTCGTATAA+AGG | + | Chr8:71087957-71087976 | None:intergenic | 40.0% | |
| GCTGCAATGTATAGAATACC+AGG | + | Chr8:71089991-71090010 | None:intergenic | 40.0% | |
| TACCAAGCAACCATTAAGCA+AGG | - | Chr8:71091114-71091133 | MsG0880046253.01.T01:CDS | 40.0% | |
| TCAATCACTGTCAAGATCTC+AGG | + | Chr8:71090502-71090521 | None:intergenic | 40.0% | |
| TGAATGCATCCCAAATCACT+TGG | - | Chr8:71090919-71090938 | MsG0880046253.01.T01:intron | 40.0% | |
| TGTTATCTTGAGATGCTCCA+AGG | + | Chr8:71089933-71089952 | None:intergenic | 40.0% | |
| TTCAATCAAACTGCTAGAGG+GGG | + | Chr8:71088494-71088513 | None:intergenic | 40.0% | |
| TTGAGATGATTCGATCAGCT+TGG | + | Chr8:71091335-71091354 | None:intergenic | 40.0% | |
| TTTGAGGAGGAAAAGCTTGT+CGG | + | Chr8:71087777-71087796 | None:intergenic | 40.0% | |
| ! | ACTCTCACCTAAGTTTTCCT+CGG | + | Chr8:71089764-71089783 | None:intergenic | 40.0% |
| ! | CAAAGGCTGGTGATTTTTCA+GGG | + | Chr8:71089187-71089206 | None:intergenic | 40.0% |
| ! | CATAAGCCATTGGTGACATT+GGG | + | Chr8:71088813-71088832 | None:intergenic | 40.0% |
| ! | GAATGCATTTTACTAGGTGG+GGG | - | Chr8:71091258-71091277 | MsG0880046253.01.T01:intron | 40.0% |
| ! | GACTAATTTGCATCAGGTAG+TGG | - | Chr8:71090471-71090490 | MsG0880046253.01.T01:intron | 40.0% |
| ! | TATCACGTTTTATCGCAGCT+GGG | - | Chr8:71091019-71091038 | MsG0880046253.01.T01:intron | 40.0% |
| ! | TCAAAGGCTGGTGATTTTTC+AGG | + | Chr8:71089188-71089207 | None:intergenic | 40.0% |
| ! | TTTCTTTTCCTTTCTGCTGC+TGG | - | Chr8:71089869-71089888 | MsG0880046253.01.T01:intron | 40.0% |
| ! | TTTGAGGCTAGCTATTATGG+TGG | + | Chr8:71088838-71088857 | None:intergenic | 40.0% |
| !! | AAAAGCGTTTGGAGTATCTG+TGG | - | Chr8:71090878-71090897 | MsG0880046253.01.T01:intron | 40.0% |
| !! | AAAGAGCATTCTTGGCATCA+GGG | + | Chr8:71091095-71091114 | None:intergenic | 40.0% |
| !! | CTCTTCGTTGCTTTGCTATT+TGG | - | Chr8:71089353-71089372 | MsG0880046253.01.T01:CDS | 40.0% |
| !! | GAACATCTTGTTGTTTGAGG+AGG | + | Chr8:71087790-71087809 | None:intergenic | 40.0% |
| !! | TAAAGAGCATTCTTGGCATC+AGG | + | Chr8:71091096-71091115 | None:intergenic | 40.0% |
| !! | TGCTTGGTAAAGAGCATTCT+TGG | + | Chr8:71091103-71091122 | None:intergenic | 40.0% |
| !!! | CCTTATTTTTCATCCGGATG+GGG | - | Chr8:71089812-71089831 | MsG0880046253.01.T01:intron | 40.0% |
| !!! | TGCTGATTCCGTTTTGGATA+TGG | - | Chr8:71087974-71087993 | MsG0880046253.01.T01:CDS | 40.0% |
| ACTGTAGGACATCTTCAGTC+TGG | + | Chr8:71089328-71089347 | None:intergenic | 45.0% | |
| ACTTGATTCCAGCAGCAGAA+AGG | + | Chr8:71089880-71089899 | None:intergenic | 45.0% | |
| ATACATACCTTGTCCCCATC+CGG | + | Chr8:71089828-71089847 | None:intergenic | 45.0% | |
| ATCGCGTCAATGGCAAATGA+AGG | - | Chr8:71087719-71087738 | MsG0880046253.01.T01:three_prime_UTR | 45.0% | |
| CACTCGAAATTTCGAGAAGG+CGG | - | Chr8:71090233-71090252 | MsG0880046253.01.T01:intron | 45.0% | |
| CAGAGATACCGACAGTATCA+AGG | - | Chr8:71091226-71091245 | MsG0880046253.01.T01:intron | 45.0% | |
| CCAAAACGGAATCAGCAACT+AGG | + | Chr8:71087971-71087990 | None:intergenic | 45.0% | |
| CCAATGTCACCAATGGCTTA+TGG | - | Chr8:71088811-71088830 | MsG0880046253.01.T01:CDS | 45.0% | |
| CCAGTGAATGGTAGATGTCA+TGG | - | Chr8:71088864-71088883 | MsG0880046253.01.T01:CDS | 45.0% | |
| CCATCGGGAATTCTAAGTTC+AGG | + | Chr8:71089428-71089447 | None:intergenic | 45.0% | |
| CCATGACATCTACCATTCAC+TGG | + | Chr8:71088867-71088886 | None:intergenic | 45.0% | |
| CCCCATCCGGATGAAAAATA+AGG | + | Chr8:71089815-71089834 | None:intergenic | 45.0% | |
| CCTGAACTTAGAATTCCCGA+TGG | - | Chr8:71089425-71089444 | MsG0880046253.01.T01:intron | 45.0% | |
| CCTGACGGAGCAAATTAAGT+TGG | - | Chr8:71090749-71090768 | MsG0880046253.01.T01:intron | 45.0% | |
| CTCAAAACATGCCCAGTGAA+TGG | - | Chr8:71088852-71088871 | MsG0880046253.01.T01:CDS | 45.0% | |
| CTCATGTAATACCGGAAGTG+TGG | + | Chr8:71090789-71090808 | None:intergenic | 45.0% | |
| CTCCTTGCTTAATGGTTGCT+TGG | + | Chr8:71091119-71091138 | None:intergenic | 45.0% | |
| GAAACCAAGACTGTTGCAGT+TGG | - | Chr8:71089953-71089972 | MsG0880046253.01.T01:intron | 45.0% | |
| GAGTGTGACAATTGAAGCCA+TGG | - | Chr8:71090854-71090873 | MsG0880046253.01.T01:intron | 45.0% | |
| GATAAAACGTGATAGCTCCC+TGG | + | Chr8:71091013-71091032 | None:intergenic | 45.0% | |
| GCTATTTGCATCCACACTTC+CGG | - | Chr8:71090775-71090794 | MsG0880046253.01.T01:intron | 45.0% | |
| GTCCACTCGAAATTTCGAGA+AGG | - | Chr8:71090230-71090249 | MsG0880046253.01.T01:intron | 45.0% | |
| GTCTCGTGTGATCGATCTTT+AGG | - | Chr8:71091167-71091186 | MsG0880046253.01.T01:CDS | 45.0% | |
| GTGACTGGGAAAGGAAGAAT+AGG | - | Chr8:71090178-71090197 | MsG0880046253.01.T01:intron | 45.0% | |
| GTTTGAAGAAGGTGGTGACT+GGG | - | Chr8:71090164-71090183 | MsG0880046253.01.T01:intron | 45.0% | |
| TGGTCACCCTTGCTTATTCT+GGG | - | Chr8:71088726-71088745 | MsG0880046253.01.T01:intron | 45.0% | |
| TGTTTGAAGAAGGTGGTGAC+TGG | - | Chr8:71090163-71090182 | MsG0880046253.01.T01:intron | 45.0% | |
| ! | AGTGAGGTGGACATTGACTA+TGG | + | Chr8:71089283-71089302 | None:intergenic | 45.0% |
| ! | ATTCATTTCAGCTGGCCTGA+CGG | - | Chr8:71090734-71090753 | MsG0880046253.01.T01:intron | 45.0% |
| ! | CATTCACTGGGCATGTTTTG+AGG | + | Chr8:71088854-71088873 | None:intergenic | 45.0% |
| ! | CATTTTCACTCTGGCAGAGA+AGG | - | Chr8:71089247-71089266 | MsG0880046253.01.T01:intron | 45.0% |
| ! | CCATAAGCCATTGGTGACAT+TGG | + | Chr8:71088814-71088833 | None:intergenic | 45.0% |
| ! | CTATCACGTTTTATCGCAGC+TGG | - | Chr8:71091018-71091037 | MsG0880046253.01.T01:intron | 45.0% |
| ! | GACAGCTTGTTTGAAGAAGG+TGG | - | Chr8:71090156-71090175 | MsG0880046253.01.T01:intron | 45.0% |
| ! | GGAAGTGTGGATGCAAATAG+CGG | + | Chr8:71090776-71090795 | None:intergenic | 45.0% |
| ! | GGATATGGATCGTGTCCTTT+TGG | - | Chr8:71087989-71088008 | MsG0880046253.01.T01:CDS | 45.0% |
| ! | TACTCCAAACGCTTTTGCCA+TGG | + | Chr8:71090874-71090893 | None:intergenic | 45.0% |
| ! | TTTTACTAGGTGGGGGAATG+AGG | - | Chr8:71091265-71091284 | MsG0880046253.01.T01:intron | 45.0% |
| !! | CCAACTTAATTTGCTCCGTC+AGG | + | Chr8:71090752-71090771 | None:intergenic | 45.0% |
| !!! | CCTAGTTGCTGATTCCGTTT+TGG | - | Chr8:71087968-71087987 | MsG0880046253.01.T01:CDS | 45.0% |
| !!! | GGTGATTTTTCAGGGCACAA+CGG | + | Chr8:71089179-71089198 | None:intergenic | 45.0% |
| !!! | TTTTAGGATTGCTGATGCCG+AGG | - | Chr8:71089744-71089763 | MsG0880046253.01.T01:intron | 45.0% |
| AACACTGTCCTCTATGCACC+AGG | - | Chr8:71089901-71089920 | MsG0880046253.01.T01:intron | 50.0% | |
| AAGAAGGTGGTGACTGGGAA+AGG | - | Chr8:71090169-71090188 | MsG0880046253.01.T01:intron | 50.0% | |
| AATGTCCACCTCACTTGAGG+AGG | - | Chr8:71089288-71089307 | MsG0880046253.01.T01:intron | 50.0% | |
| AGGGTTTACGGAGAGAGAAG+AGG | + | Chr8:71087879-71087898 | None:intergenic | 50.0% | |
| AGGTGAGAGTGAAGTTCGTG+AGG | - | Chr8:71089774-71089793 | MsG0880046253.01.T01:intron | 50.0% | |
| CAACGAAGAGGGTTCACTGT+AGG | + | Chr8:71089343-71089362 | None:intergenic | 50.0% | |
| CAGAATAAGCAAGGGTGACC+AGG | + | Chr8:71088727-71088746 | None:intergenic | 50.0% | |
| CGATCACACGAGACAGTTTC+TGG | + | Chr8:71091161-71091180 | None:intergenic | 50.0% | |
| CGCCTTCTCGAAATTTCGAG+TGG | + | Chr8:71090235-71090254 | None:intergenic | 50.0% | |
| CTGGTCACCCTTGCTTATTC+TGG | - | Chr8:71088725-71088744 | MsG0880046253.01.T01:intron | 50.0% | |
| GCAGCTTGGTTTCTTTGGCA+TGG | - | Chr8:71090006-71090025 | MsG0880046253.01.T01:intron | 50.0% | |
| GCTGATGCCGAGGAAAACTT+AGG | - | Chr8:71089754-71089773 | MsG0880046253.01.T01:intron | 50.0% | |
| GGGTTTACGGAGAGAGAAGA+GGG | + | Chr8:71087878-71087897 | None:intergenic | 50.0% | |
| GGTCACCCTTGCTTATTCTG+GGG | - | Chr8:71088727-71088746 | MsG0880046253.01.T01:intron | 50.0% | |
| GTCAATGTCCACCTCACTTG+AGG | - | Chr8:71089285-71089304 | MsG0880046253.01.T01:intron | 50.0% | |
| TAGCACGCATGGAGTCCAAA+AGG | + | Chr8:71088007-71088026 | None:intergenic | 50.0% | |
| TATGCACCAGGAGAAAGCCT+TGG | - | Chr8:71089913-71089932 | MsG0880046253.01.T01:intron | 50.0% | |
| TATGGTGGCCCATAAGCCAT+TGG | + | Chr8:71088823-71088842 | None:intergenic | 50.0% | |
| TCATCTGTCAGCTCAAAGGC+TGG | + | Chr8:71089200-71089219 | None:intergenic | 50.0% | |
| TGAAGTTCGTGAGGCTCACT+TGG | - | Chr8:71089783-71089802 | MsG0880046253.01.T01:intron | 50.0% | |
| TGTTGCAGTTGGGCAGAAGA+TGG | - | Chr8:71089964-71089983 | MsG0880046253.01.T01:intron | 50.0% | |
| TTCGAGTGGACATGCAGTAG+AGG | + | Chr8:71090221-71090240 | None:intergenic | 50.0% | |
| TTTGCATCGCATCGCGTCAA+TGG | - | Chr8:71087709-71087728 | MsG0880046253.01.T01:three_prime_UTR | 50.0% | |
| ! | TTTTCATCCGGATGGGGACA+AGG | - | Chr8:71089818-71089837 | MsG0880046253.01.T01:intron | 50.0% |
| !! | GAAGCCATGGCAAAAGCGTT+TGG | - | Chr8:71090867-71090886 | MsG0880046253.01.T01:intron | 50.0% |
| AGTTGGGCAGAAGATGGACC+TGG | - | Chr8:71089970-71089989 | MsG0880046253.01.T01:intron | 55.0% | |
| CATTGCAGCCTCCTCAAGTG+AGG | + | Chr8:71089299-71089318 | None:intergenic | 55.0% | |
| CTGCCCAACTGCAACAGTCT+TGG | + | Chr8:71089960-71089979 | None:intergenic | 55.0% | |
| GAAGGCGGCCACATTGTTCT+TGG | - | Chr8:71090248-71090267 | MsG0880046253.01.T01:intron | 55.0% | |
| GAGCATTCTTGGCATCAGGG+CGG | + | Chr8:71091092-71091111 | None:intergenic | 55.0% | |
| GATGCTCCAAGGCTTTCTCC+TGG | + | Chr8:71089922-71089941 | None:intergenic | 55.0% | |
| GGCTTTCTCCTGGTGCATAG+AGG | + | Chr8:71089912-71089931 | None:intergenic | 55.0% | |
| TTGTCGGCGAGGACAAGTTG+TGG | + | Chr8:71087761-71087780 | None:intergenic | 55.0% | |
| GGAGGAAAAGCTTGTCGGCG+AGG | + | Chr8:71087772-71087791 | None:intergenic | 60.0% | |
| TGCAGCCTCCTCAAGTGAGG+TGG | + | Chr8:71089296-71089315 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 71087689 | 71091462 | 71087689 | ID=MsG0880046253.01;Name=MsG0880046253.01 |
| Chr8 | mRNA | 71087689 | 71091462 | 71087689 | ID=MsG0880046253.01.T01;Parent=MsG0880046253.01;Name=MsG0880046253.01.T01;_AED=0.48;_eAED=0.48;_QI=39|0.85|0.87|1|1|1|8|274|370 |
| Chr8 | exon | 71087689 | 71088137 | 71087689 | ID=MsG0880046253.01.T01:exon:15442;Parent=MsG0880046253.01.T01 |
| Chr8 | exon | 71088238 | 71088406 | 71088238 | ID=MsG0880046253.01.T01:exon:15441;Parent=MsG0880046253.01.T01 |
| Chr8 | exon | 71088556 | 71088664 | 71088556 | ID=MsG0880046253.01.T01:exon:15440;Parent=MsG0880046253.01.T01 |
| Chr8 | exon | 71088771 | 71088990 | 71088771 | ID=MsG0880046253.01.T01:exon:15439;Parent=MsG0880046253.01.T01 |
| Chr8 | exon | 71089084 | 71089179 | 71089084 | ID=MsG0880046253.01.T01:exon:15438;Parent=MsG0880046253.01.T01 |
| Chr8 | exon | 71089312 | 71089401 | 71089312 | ID=MsG0880046253.01.T01:exon:15437;Parent=MsG0880046253.01.T01 |
| Chr8 | exon | 71091091 | 71091205 | 71091091 | ID=MsG0880046253.01.T01:exon:15436;Parent=MsG0880046253.01.T01 |
| Chr8 | exon | 71091285 | 71091462 | 71091285 | ID=MsG0880046253.01.T01:exon:15435;Parent=MsG0880046253.01.T01 |
| Chr8 | five_prime_UTR | 71091424 | 71091462 | 71091424 | ID=MsG0880046253.01.T01:five_prime_utr;Parent=MsG0880046253.01.T01 |
| Chr8 | CDS | 71091285 | 71091423 | 71091285 | ID=MsG0880046253.01.T01:cds;Parent=MsG0880046253.01.T01 |
| Chr8 | CDS | 71091091 | 71091205 | 71091091 | ID=MsG0880046253.01.T01:cds;Parent=MsG0880046253.01.T01 |
| Chr8 | CDS | 71089312 | 71089401 | 71089312 | ID=MsG0880046253.01.T01:cds;Parent=MsG0880046253.01.T01 |
| Chr8 | CDS | 71089084 | 71089179 | 71089084 | ID=MsG0880046253.01.T01:cds;Parent=MsG0880046253.01.T01 |
| Chr8 | CDS | 71088771 | 71088990 | 71088771 | ID=MsG0880046253.01.T01:cds;Parent=MsG0880046253.01.T01 |
| Chr8 | CDS | 71088556 | 71088664 | 71088556 | ID=MsG0880046253.01.T01:cds;Parent=MsG0880046253.01.T01 |
| Chr8 | CDS | 71088238 | 71088406 | 71088238 | ID=MsG0880046253.01.T01:cds;Parent=MsG0880046253.01.T01 |
| Chr8 | CDS | 71087963 | 71088137 | 71087963 | ID=MsG0880046253.01.T01:cds;Parent=MsG0880046253.01.T01 |
| Chr8 | three_prime_UTR | 71087689 | 71087962 | 71087689 | ID=MsG0880046253.01.T01:three_prime_utr;Parent=MsG0880046253.01.T01 |
| Gene Sequence |
| Protein sequence |
