AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025115.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025115.01.T01 MTR_5g022440 97.917 384 3 1 1 379 1 384 0.0 760
MsG0580025115.01.T01 MTR_8g075390 80.928 388 51 5 1 378 1 375 0.0 551
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025115.01.T01 AT4G38630 66.146 384 110 7 1 379 1 369 1.37e-164 467

Find 101 sgRNAs with CRISPR-Local

Find 313 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTGCAGCTGCAGCTGCAGC+TGG 0.162849 5:+14012871 MsG0580025115.01.T01:CDS
GCGCTTGATGTAGTTAATTT+TGG 0.206385 5:+14012566 MsG0580025115.01.T01:CDS
CGGAAAGGGTGTTCGTGTTT+TGG 0.243942 5:+14011130 MsG0580025115.01.T01:CDS
CAAAACACGAACACCCTTTC+CGG 0.267611 5:-14011129 None:intergenic
CAATAAGACAACTGATTTGA+TGG 0.280153 5:+14013098 MsG0580025115.01.T01:CDS
CTGCAGCTGCAGCTGCAGCT+GGG 0.291472 5:+14012872 MsG0580025115.01.T01:CDS
TGAGCCTCCTTTCTCTTGTT+TGG 0.297999 5:-14013025 None:intergenic
CAAAGGATTATTGTCTTTGC+TGG 0.298005 5:+14012391 MsG0580025115.01.T01:CDS
GGTGGAACTGGATATGATTT+TGG 0.301276 5:+14012895 MsG0580025115.01.T01:CDS
CCCTTCTATCAAAGATTTGC+TGG 0.304569 5:+14015489 MsG0580025115.01.T01:CDS
GAACCTAGCTGCTGGTATTC+AGG 0.311840 5:+14012324 MsG0580025115.01.T01:CDS
TCCCCATCGCCAGTGAAAAT+TGG 0.318823 5:-14012826 None:intergenic
TAATTCCTTTGGCAGCTTCC+CGG 0.320953 5:+14015451 MsG0580025115.01.T01:intron
CTCTTTCTGATGTACTTATA+AGG 0.321346 5:+14012690 MsG0580025115.01.T01:CDS
CTCTTCCATTGAAACTCTTA+AGG 0.337538 5:-14012953 None:intergenic
GCCAATTCAGGATCCAAGTT+TGG 0.345821 5:-14012925 None:intergenic
AGACTAACCTCAGATTGATT+TGG 0.348582 5:-14015520 None:intergenic
TACAGTTGGAGTTCTTATAA+TGG 0.358277 5:+14011106 MsG0580025115.01.T01:CDS
ACTGATTCAGGACTAGAAAT+AGG 0.363462 5:+14012292 MsG0580025115.01.T01:intron
AATTCCTTTGGCAGCTTCCC+GGG 0.364317 5:+14015452 MsG0580025115.01.T01:intron
TCCAAACTTGGATCCTGAAT+TGG 0.370635 5:+14012924 MsG0580025115.01.T01:CDS
AAGAAAATGTTGGAGATGAT+AGG 0.372029 5:+14012518 MsG0580025115.01.T01:CDS
TGCAGCTGCAGCTGCAGCTG+GGG 0.384116 5:+14012873 MsG0580025115.01.T01:CDS
GCCAGCAAATCTTTGATAGA+AGG 0.388474 5:-14015490 None:intergenic
TGGTATTCAGGTGGCACAAT+TGG 0.403899 5:+14012336 MsG0580025115.01.T01:CDS
ATCTCACCTAGTGCCAGCTC+AGG 0.409983 5:-14014148 None:intergenic
CTTAAGGCAAGAGCCAATTC+AGG 0.410841 5:-14012937 None:intergenic
AGTACATCAGAAAGAGCATT+TGG 0.417355 5:-14012683 None:intergenic
AGCGGATAGTACAGGGGATC+AGG 0.434310 5:+14015295 MsG0580025115.01.T01:CDS
CTTAAGAGTTTCAATGGAAG+AGG 0.440830 5:+14012954 MsG0580025115.01.T01:CDS
TTGCAAGCGCTTGCTGCAGT+AGG 0.440883 5:-14014054 None:intergenic
TTGAATAATACAGTCGAATC+CGG 0.440886 5:+14011079 MsG0580025115.01.T01:intron
GCAGCTGCAGCTGCAGCTGG+GGG 0.443828 5:+14012874 MsG0580025115.01.T01:CDS
AAGCGATCTAGGCAAGATAT+TGG 0.447295 5:+14011163 MsG0580025115.01.T01:CDS
ATCTTGCCTAGATCGCTTGT+AGG 0.451316 5:-14011158 None:intergenic
TGAAGCAAAGACTGAGAAGC+TGG 0.459635 5:+14012598 MsG0580025115.01.T01:CDS
CTTAAATCATGGCCAACTGC+AGG 0.460862 5:-14014091 None:intergenic
GAAAGAGCATTTGGACCAGC+TGG 0.461973 5:-14012674 None:intergenic
GTCACGCCTACAAGCGATCT+AGG 0.462781 5:+14011152 MsG0580025115.01.T01:CDS
TTGTTCAATAAGAAGAGAAA+AGG 0.463948 5:-14010440 None:intergenic
GTCAGACGTGACTAGATTGT+TGG 0.472662 5:+14015325 MsG0580025115.01.T01:CDS
AAGATATTGGCTTGCATGCA+TGG 0.473341 5:+14011176 MsG0580025115.01.T01:CDS
GGAAGAGGAAAGAGCTAGGC+AGG 0.474797 5:+14012969 MsG0580025115.01.T01:CDS
CAGCTGGAACATGAACGATA+TGG 0.476638 5:-14012658 None:intergenic
ATTTAGGTTAACCTGAGTCT+TGG 0.480341 5:-14010731 None:intergenic
ACAATCTAGTCACGTCTGAC+TGG 0.487951 5:-14015322 None:intergenic
GGCGATGGGGAAGGTGGAAG+CGG 0.487998 5:+14012838 MsG0580025115.01.T01:CDS
TTGTCAGTAGCGGATAGTAC+AGG 0.488303 5:+14015287 MsG0580025115.01.T01:intron
AACCTCAGATTGATTTGGAA+TGG 0.493549 5:-14015515 None:intergenic
TGCAAGCGCTTGCTGCAGTA+GGG 0.495910 5:-14014053 None:intergenic
TGCTTCAGAAGTTGATGCAC+TGG 0.500973 5:-14013073 None:intergenic
TGCAGCTGCAGCTGCAGCAG+CGG 0.504256 5:-14012866 None:intergenic
ATCTGAGGTTAGTCTTTCCA+TGG 0.506101 5:+14015528 MsG0580025115.01.T01:CDS
AGAAAATGTTGGAGATGATA+GGG 0.513265 5:+14012519 MsG0580025115.01.T01:CDS
TCTTGCCTTAAGAGTTTCAA+TGG 0.516561 5:+14012948 MsG0580025115.01.T01:CDS
TATCTGTATCTCTTAAATCA+TGG 0.517719 5:-14014102 None:intergenic
GTTGGAGTTCTTATAATGGC+CGG 0.522830 5:+14011110 MsG0580025115.01.T01:CDS
GTTCTTATAATGGCCGGAAA+GGG 0.529679 5:+14011116 MsG0580025115.01.T01:CDS
GATGCTGTTAATCTCATTTG+CGG 0.530412 5:+14010706 MsG0580025115.01.T01:CDS
GGATTATTGTCTTTGCTGGA+AGG 0.537771 5:+14012395 MsG0580025115.01.T01:CDS
GAAGCATGAAAAGAAAATGT+TGG 0.539117 5:+14012508 MsG0580025115.01.T01:CDS
ATCTGCAGATGACCCTGAGC+TGG 0.542125 5:+14014135 MsG0580025115.01.T01:CDS
AGTTCTTATAATGGCCGGAA+AGG 0.543234 5:+14011115 MsG0580025115.01.T01:CDS
TGTTCAATAAGAAGAGAAAA+GGG 0.545445 5:-14010439 None:intergenic
CATTTGCGGTGCCAAGACTC+AGG 0.548520 5:+14010720 MsG0580025115.01.T01:CDS
CGCTTCTAAATCTTCAACCA+TGG 0.555050 5:+14010508 MsG0580025115.01.T01:exon
ATCTTCAACCATGGTGCTCG+AGG 0.555601 5:+14010517 MsG0580025115.01.T01:exon
CCAGCAAATCTTTGATAGAA+GGG 0.562714 5:-14015489 None:intergenic
TGTCAGTAGCGGATAGTACA+GGG 0.567328 5:+14015288 MsG0580025115.01.T01:intron
TTCACTGGCGATGGGGAAGG+TGG 0.567749 5:+14012832 MsG0580025115.01.T01:CDS
CATATCGTTCATGTTCCAGC+TGG 0.573598 5:+14012659 MsG0580025115.01.T01:CDS
TCTGTATTGACAATTCTGAA+TGG 0.573905 5:+14010638 MsG0580025115.01.T01:CDS
CAATGGAAGAGGAAAGAGCT+AGG 0.574068 5:+14012965 MsG0580025115.01.T01:CDS
GCAAGCGCTTGCAATGTCAA+TGG 0.578213 5:+14014063 MsG0580025115.01.T01:CDS
TTAAATCATGGCCAACTGCA+GGG 0.584949 5:-14014090 None:intergenic
ATTCCTTTGGCAGCTTCCCG+GGG 0.587464 5:+14015453 MsG0580025115.01.T01:intron
GATGCTGCCAAACAAGAGAA+AGG 0.587529 5:+14013018 MsG0580025115.01.T01:CDS
CGCAAGAATATCAGATACAC+GGG 0.590827 5:-14015357 None:intergenic
CCACCTGAATACCAGCAGCT+AGG 0.595708 5:-14012327 None:intergenic
GGTGAGATGAACCTAGCTGC+TGG 0.597381 5:+14012316 MsG0580025115.01.T01:CDS
GGGTCATTTATGTCAACCCC+GGG 0.601962 5:-14015469 None:intergenic
TCGAATCCGGAAAATACAGT+TGG 0.607578 5:+14011092 MsG0580025115.01.T01:CDS
GATGACCCTGAGCTGGCACT+AGG 0.611948 5:+14014142 MsG0580025115.01.T01:CDS
AGGGTCATTTATGTCAACCC+CGG 0.615942 5:-14015470 None:intergenic
TGTATCTGATATTCTTGCGT+CGG 0.618378 5:+14015361 MsG0580025115.01.T01:CDS
AATTCTGAATGGATGCGTAA+CGG 0.621250 5:+14010649 MsG0580025115.01.T01:CDS
TCAATGGATGACCCTGCAGT+TGG 0.633492 5:+14014079 MsG0580025115.01.T01:CDS
ATCCATTCCAAATCAATCTG+AGG 0.635456 5:+14015513 MsG0580025115.01.T01:CDS
TGTGATGATGATGAAGATCA+AGG 0.636880 5:-14010481 None:intergenic
ACGCAAGAATATCAGATACA+CGG 0.643826 5:-14015358 None:intergenic
TCTCACCTAGTGCCAGCTCA+GGG 0.643932 5:-14014147 None:intergenic
GCTTGAGCTTGAAATCGAGA+AGG 0.649113 5:-14010682 None:intergenic
ACAAGATGCGACAATGACTG+AGG 0.653586 5:+14013047 MsG0580025115.01.T01:CDS
CAAGATGCGACAATGACTGA+GGG 0.656289 5:+14013048 MsG0580025115.01.T01:CDS
CCTAGCTGCTGGTATTCAGG+TGG 0.660293 5:+14012327 MsG0580025115.01.T01:CDS
TAAGAAGAGAAAAGGGACGA+TGG 0.666789 5:-14010432 None:intergenic
ATAAATTACCTCGAGCACCA+TGG 0.693882 5:-14010525 None:intergenic
GCTGCCAAACAAGAGAAAGG+AGG 0.696072 5:+14013021 MsG0580025115.01.T01:CDS
GATTCAGGACTAGAAATAGG+CGG 0.712728 5:+14012295 MsG0580025115.01.T01:intron
GTCAGTAGCGGATAGTACAG+GGG 0.716711 5:+14015289 MsG0580025115.01.T01:intron
TTGTTTGGCAGCATCCTCTG+CGG 0.738209 5:-14013010 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAATTAACAAGATTAAT+AGG + Chr5:14011689-14011708 MsG0580025115.01.T01:intron 10.0%
!! AACAATAATGATTAAATAAA+GGG - Chr5:14010793-14010812 None:intergenic 10.0%
!! TCCTATTATTATTATTATTT+GGG + Chr5:14011437-14011456 MsG0580025115.01.T01:intron 10.0%
!! TTCCTATTATTATTATTATT+TGG + Chr5:14011436-14011455 MsG0580025115.01.T01:intron 10.0%
!!! ACTTTGAAATAATATATTAT+AGG + Chr5:14013498-14013517 MsG0580025115.01.T01:intron 10.0%
!! ATTAATATGATGTAAGATTT+AGG - Chr5:14010750-14010769 None:intergenic 15.0%
!! ATTAATTATTAGTGCAAAAA+AGG - Chr5:14015435-14015454 None:intergenic 15.0%
!! CAACAATAATGATTAAATAA+AGG - Chr5:14010794-14010813 None:intergenic 15.0%
!! TAAATATGTGAATGTATAAT+TGG - Chr5:14015099-14015118 None:intergenic 15.0%
!! TGATGATAAAATAAATAAAG+CGG - Chr5:14013713-14013732 None:intergenic 15.0%
!!! AATCATTATTGTTGTTTTTA+TGG + Chr5:14010800-14010819 MsG0580025115.01.T01:intron 15.0%
!!! ATATAAGATCACTTTTTATA+AGG + Chr5:14012125-14012144 MsG0580025115.01.T01:intron 15.0%
!!! GATTTTAGATAATTATGTTT+TGG - Chr5:14013348-14013367 None:intergenic 15.0%
!!! GTTTTTATGGAAAAATTAAT+TGG + Chr5:14010813-14010832 MsG0580025115.01.T01:intron 15.0%
!!! TTTTTATGTATTCTTTATCT+AGG + Chr5:14014178-14014197 MsG0580025115.01.T01:intron 15.0%
!!! TTTTTTTATGCCTAAAAATT+TGG + Chr5:14011716-14011735 MsG0580025115.01.T01:intron 15.0%
!! AAAATAAAAAGCAACATCAA+AGG + Chr5:14012374-14012393 MsG0580025115.01.T01:CDS 20.0%
!! AGCTAGAGTTATTATTATAT+TGG + Chr5:14014545-14014564 MsG0580025115.01.T01:intron 20.0%
!! ATTAGTAGAATTCTATTAAG+AGG + Chr5:14014607-14014626 MsG0580025115.01.T01:intron 20.0%
!! GAAAAATTAATTGGAGATAT+TGG + Chr5:14010822-14010841 MsG0580025115.01.T01:intron 20.0%
!! GAATTTATAGAAATTGTAAC+TGG + Chr5:14014866-14014885 MsG0580025115.01.T01:intron 20.0%
!! GCCCAAATAATAATAATAAT+AGG - Chr5:14011441-14011460 None:intergenic 20.0%
!! TAATAGAATTCTACTAATCA+AGG - Chr5:14014605-14014624 None:intergenic 20.0%
!! TAGTTTATGATTATTGCATA+GGG + Chr5:14010930-14010949 MsG0580025115.01.T01:intron 20.0%
!! TCATCATATAAATATCATGA+TGG - Chr5:14012789-14012808 None:intergenic 20.0%
!! TCTTATGTTCAACAAAATAA+TGG + Chr5:14012755-14012774 MsG0580025115.01.T01:intron 20.0%
!! TGAAATATAACAGTTTCATA+AGG - Chr5:14011538-14011557 None:intergenic 20.0%
!! TTAGTTTATGATTATTGCAT+AGG + Chr5:14010929-14010948 MsG0580025115.01.T01:intron 20.0%
!! TTATTCAACCTATCATTTAA+GGG - Chr5:14011603-14011622 None:intergenic 20.0%
!! TTTATTCAACCTATCATTTA+AGG - Chr5:14011604-14011623 None:intergenic 20.0%
!!! AAAAAGCATTTAAAGGTTTT+TGG - Chr5:14011664-14011683 None:intergenic 20.0%
!!! AACTGTTATATTTCACATTT+TGG + Chr5:14011543-14011562 MsG0580025115.01.T01:intron 20.0%
!!! AAGATTCTGAAATTTGTTAT+TGG + Chr5:14014889-14014908 MsG0580025115.01.T01:intron 20.0%
!!! AATTCCATAAAGATTTTGAA+TGG - Chr5:14011383-14011402 None:intergenic 20.0%
!!! ATATTATAGGATCCAATTTT+GGG + Chr5:14013511-14013530 MsG0580025115.01.T01:intron 20.0%
!!! GATTCTAATTTTCAATTCAT+AGG + Chr5:14014579-14014598 MsG0580025115.01.T01:intron 20.0%
!!! GATTTTGTAGTTTTTAGAAT+AGG + Chr5:14010893-14010912 MsG0580025115.01.T01:intron 20.0%
!!! TATATTATAGGATCCAATTT+TGG + Chr5:14013510-14013529 MsG0580025115.01.T01:intron 20.0%
!!! TCTATATTTTCTATAGAGAA+GGG + Chr5:14015200-14015219 MsG0580025115.01.T01:intron 20.0%
!!! TTCTATATTTTCTATAGAGA+AGG + Chr5:14015199-14015218 MsG0580025115.01.T01:intron 20.0%
!!! TTGAAGAAAAAAGCATTTAA+AGG - Chr5:14011671-14011690 None:intergenic 20.0%
!!! TTTGGTATTAAGTATGTTTT+TGG - Chr5:14013330-14013349 None:intergenic 20.0%
!!! TTTTTATAAGGCATATCTAT+TGG + Chr5:14012137-14012156 MsG0580025115.01.T01:intron 20.0%
! AAACATCCATGAAAATTAGT+GGG - Chr5:14013179-14013198 None:intergenic 25.0%
! AACATGAAGAAAAAACATCT+CGG - Chr5:14014512-14014531 None:intergenic 25.0%
! AATTTGATGTAGATCATATC+AGG - Chr5:14013898-14013917 None:intergenic 25.0%
! GACTGTATTATTCAAATCAA+AGG - Chr5:14011074-14011093 None:intergenic 25.0%
! GCACTAATAATTAATTCCTT+TGG + Chr5:14015440-14015459 MsG0580025115.01.T01:intron 25.0%
! TAAACATCCATGAAAATTAG+TGG - Chr5:14013180-14013199 None:intergenic 25.0%
! TAGCATTCTTCTTCTATTAA+TGG + Chr5:14014791-14014810 MsG0580025115.01.T01:intron 25.0%
! TATCTGTATCTCTTAAATCA+TGG - Chr5:14014105-14014124 None:intergenic 25.0%
! TCAACCATTCAAAATCTTTA+TGG + Chr5:14011376-14011395 MsG0580025115.01.T01:intron 25.0%
! TGCAATAATTAATAAGTCGA+TGG + Chr5:14011292-14011311 MsG0580025115.01.T01:intron 25.0%
! TGTTCAATAAGAAGAGAAAA+GGG - Chr5:14010442-14010461 None:intergenic 25.0%
! TTGTTCAATAAGAAGAGAAA+AGG - Chr5:14010443-14010462 None:intergenic 25.0%
!! ATCTTCTCATAACAACTTTT+AGG - Chr5:14011761-14011780 None:intergenic 25.0%
!! TCTTCTCATAACAACTTTTA+GGG - Chr5:14011760-14011779 None:intergenic 25.0%
!! TTCCCTTAAAATCTTTAGAA+AGG - Chr5:14011839-14011858 None:intergenic 25.0%
!!! AATGGTTTTAAAATCTGAGA+TGG + Chr5:14013629-14013648 MsG0580025115.01.T01:intron 25.0%
!!! AGATTTTAAAACCATTGCAT+GGG - Chr5:14013625-14013644 None:intergenic 25.0%
!!! AGTCCTTTCTAAAGATTTTA+AGG + Chr5:14011833-14011852 MsG0580025115.01.T01:intron 25.0%
!!! ATTACTGATCATAATTTGCT+TGG + Chr5:14011882-14011901 MsG0580025115.01.T01:intron 25.0%
!!! GTCCTTTCTAAAGATTTTAA+GGG + Chr5:14011834-14011853 MsG0580025115.01.T01:intron 25.0%
!!! TAAAGATTTTAAGGGAAGTA+AGG + Chr5:14011842-14011861 MsG0580025115.01.T01:intron 25.0%
!!! TGAGTTCTTTTTCATTGTTT+CGG - Chr5:14012190-14012209 None:intergenic 25.0%
!!! TTTTAACTTTTGTTGGTTTC+TGG + Chr5:14015239-14015258 MsG0580025115.01.T01:intron 25.0%
!!! TTTTTTCTTGTTACTGATTC+AGG + Chr5:14012280-14012299 MsG0580025115.01.T01:intron 25.0%
AAAAAGTGGATACCTCAAAA+AGG - Chr5:14014335-14014354 None:intergenic 30.0%
AAAAGTTAAAACAACCACCA+TGG - Chr5:14015230-14015249 None:intergenic 30.0%
AAATATAGAATCCCACATTC+AGG - Chr5:14015189-14015208 None:intergenic 30.0%
AACTGTGAACCATTAAAAAG+TGG - Chr5:14014349-14014368 None:intergenic 30.0%
AAGAAAATGTTGGAGATGAT+AGG + Chr5:14012518-14012537 MsG0580025115.01.T01:CDS 30.0%
AATTGGAGATATTGGAATTC+TGG + Chr5:14010830-14010849 MsG0580025115.01.T01:intron 30.0%
AGAAAATGTTGGAGATGATA+GGG + Chr5:14012519-14012538 MsG0580025115.01.T01:CDS 30.0%
AGCTACTTGCTTTGATTAAT+GGG + Chr5:14015126-14015145 MsG0580025115.01.T01:intron 30.0%
AGTACACTATTTGCACAATA+TGG - Chr5:14012236-14012255 None:intergenic 30.0%
ATAGCATAATCTCAATGAGA+AGG - Chr5:14011939-14011958 None:intergenic 30.0%
ATCATCCTGATTTCAATTGA+AGG - Chr5:14014026-14014045 None:intergenic 30.0%
ATGGAACTTCAATGTCTAAA+GGG - Chr5:14014272-14014291 None:intergenic 30.0%
ATTGGAAATTACTAGATGAG+CGG + Chr5:14014907-14014926 MsG0580025115.01.T01:intron 30.0%
CTATTAATGGTGAGAAAGTA+GGG + Chr5:14014804-14014823 MsG0580025115.01.T01:intron 30.0%
CTCTTTCTGATGTACTTATA+AGG + Chr5:14012690-14012709 MsG0580025115.01.T01:CDS 30.0%
GAAGCATGAAAAGAAAATGT+TGG + Chr5:14012508-14012527 MsG0580025115.01.T01:CDS 30.0%
GATTGAGATAGGGTAAATTT+AGG + Chr5:14010852-14010871 MsG0580025115.01.T01:intron 30.0%
GCATCAGAATTAAGAATCAT+TGG - Chr5:14011796-14011815 None:intergenic 30.0%
TACAGTTGGAGTTCTTATAA+TGG + Chr5:14011106-14011125 MsG0580025115.01.T01:CDS 30.0%
TAGCTACTTGCTTTGATTAA+TGG + Chr5:14015125-14015144 MsG0580025115.01.T01:intron 30.0%
TATTAATGGTGAGAAAGTAG+GGG + Chr5:14014805-14014824 MsG0580025115.01.T01:intron 30.0%
TATTCTTTATCTAGGAAGCA+TGG + Chr5:14014186-14014205 MsG0580025115.01.T01:intron 30.0%
TCAACTAAATCTTCACTGAA+AGG - Chr5:14013477-14013496 None:intergenic 30.0%
TCTATTAATGGTGAGAAAGT+AGG + Chr5:14014803-14014822 MsG0580025115.01.T01:intron 30.0%
TGATTAATGGGGTTATAGAT+TGG + Chr5:14015138-14015157 MsG0580025115.01.T01:intron 30.0%
TGGATGTTTATCTAACGATT+TGG + Chr5:14013190-14013209 MsG0580025115.01.T01:intron 30.0%
TGGGAAAGTTACAATCAATT+TGG - Chr5:14013606-14013625 None:intergenic 30.0%
TTATTGGGTGAAATCAATGT+AGG + Chr5:14014664-14014683 MsG0580025115.01.T01:intron 30.0%
TTGAATAATACAGTCGAATC+CGG + Chr5:14011079-14011098 MsG0580025115.01.T01:intron 30.0%
TTGTTAAATAGCAGCTATAG+CGG - Chr5:14012079-14012098 None:intergenic 30.0%
! ATGTTCAAGGCCAAATTTTT+AGG - Chr5:14011729-14011748 None:intergenic 30.0%
! ATTCTTTATCTAGGAAGCAT+GGG + Chr5:14014187-14014206 MsG0580025115.01.T01:intron 30.0%
! CAAATTTGTTTCTTCATGCT+AGG + Chr5:14013933-14013952 MsG0580025115.01.T01:intron 30.0%
! CAATGTAGTATGTTTTTCCA+TGG - Chr5:14015548-14015567 None:intergenic 30.0%
! GCTATTTAACAACACTGTTT+TGG + Chr5:14012087-14012106 MsG0580025115.01.T01:intron 30.0%
! TAGTTTTCCATAGCAACTAA+CGG - Chr5:14015015-14015034 None:intergenic 30.0%
! TCTGTATTGACAATTCTGAA+TGG + Chr5:14010638-14010657 MsG0580025115.01.T01:CDS 30.0%
! TTGAAATGATGAAGCTTTGA+AGG - Chr5:14013683-14013702 None:intergenic 30.0%
!! AACAACACTGTTTTGGATAT+TGG + Chr5:14012094-14012113 MsG0580025115.01.T01:intron 30.0%
!! AATAAGTCGATGGCTTTAAA+AGG + Chr5:14011302-14011321 MsG0580025115.01.T01:intron 30.0%
!! ACATTGATTTCACCCAATAA+AGG + Chr5:14014730-14014749 MsG0580025115.01.T01:intron 30.0%
!! ACTGGATTTGTTTTCTGTTA+GGG - Chr5:14015049-14015068 None:intergenic 30.0%
!! ATCCAATTTTGGGTACAATT+TGG + Chr5:14013521-14013540 MsG0580025115.01.T01:intron 30.0%
!! CAATAAGACAACTGATTTGA+TGG + Chr5:14013098-14013117 MsG0580025115.01.T01:CDS 30.0%
!! CACTATTTTCTGGAAAACAA+GGG + Chr5:14011339-14011358 MsG0580025115.01.T01:intron 30.0%
!! GAAACTGTTGCTTTAACATT+TGG + Chr5:14013833-14013852 MsG0580025115.01.T01:intron 30.0%
!! TACTGGATTTGTTTTCTGTT+AGG - Chr5:14015050-14015069 None:intergenic 30.0%
!!! CAGATTTTAAAACCATTGCA+TGG - Chr5:14013626-14013645 None:intergenic 30.0%
!!! GTGGTTGTTTTAACTTTTGT+TGG + Chr5:14015232-14015251 MsG0580025115.01.T01:intron 30.0%
!!! TAGGGTTTTGTTAATGTTCA+AGG - Chr5:14011742-14011761 None:intergenic 30.0%
!!! TTGAGGTATCCACTTTTTAA+TGG + Chr5:14014337-14014356 MsG0580025115.01.T01:intron 30.0%
AAAATGGAACCCACATAAAG+TGG + Chr5:14014699-14014718 MsG0580025115.01.T01:intron 35.0%
AAATTCTGCCGAAGTTATAG+TGG + Chr5:14012046-14012065 MsG0580025115.01.T01:intron 35.0%
AATTCTGAATGGATGCGTAA+CGG + Chr5:14010649-14010668 MsG0580025115.01.T01:CDS 35.0%
ACGCAAGAATATCAGATACA+CGG - Chr5:14015361-14015380 None:intergenic 35.0%
ACTAAATCTTCACTGAAAGG+AGG - Chr5:14013474-14013493 None:intergenic 35.0%
ACTATAACTTCGGCAGAATT+TGG - Chr5:14012047-14012066 None:intergenic 35.0%
AGACTAACCTCAGATTGATT+TGG - Chr5:14015523-14015542 None:intergenic 35.0%
AGTCACATTTCGTTTGATGA+TGG + Chr5:14014434-14014453 MsG0580025115.01.T01:intron 35.0%
ATCCATTCCAAATCAATCTG+AGG + Chr5:14015513-14015532 MsG0580025115.01.T01:CDS 35.0%
ATTGAAGGTCATCTACTGTT+TGG - Chr5:14014011-14014030 None:intergenic 35.0%
ATTGTAACTTTCCCATGCAA+TGG + Chr5:14013611-14013630 MsG0580025115.01.T01:intron 35.0%
CAAAGGATTATTGTCTTTGC+TGG + Chr5:14012391-14012410 MsG0580025115.01.T01:CDS 35.0%
CACAGTTCTTAAACATGGAT+GGG + Chr5:14014362-14014381 MsG0580025115.01.T01:intron 35.0%
CAGGAAAAGAGAAAATCTGA+GGG + Chr5:14014839-14014858 MsG0580025115.01.T01:intron 35.0%
CATGGAACTTCAATGTCTAA+AGG - Chr5:14014273-14014292 None:intergenic 35.0%
CCAGCAAATCTTTGATAGAA+GGG - Chr5:14015492-14015511 None:intergenic 35.0%
CTCTTCCATTGAAACTCTTA+AGG - Chr5:14012956-14012975 None:intergenic 35.0%
CTTAAGAGTTTCAATGGAAG+AGG + Chr5:14012954-14012973 MsG0580025115.01.T01:CDS 35.0%
GAAAACAAATCCAGTACAAC+AGG + Chr5:14015054-14015073 MsG0580025115.01.T01:intron 35.0%
GAGTTCATAAAAGTTCAACC+TGG - Chr5:14012163-14012182 None:intergenic 35.0%
GATGACCTTCAATTGAAATC+AGG + Chr5:14014018-14014037 MsG0580025115.01.T01:intron 35.0%
GATGCTGTTAATCTCATTTG+CGG + Chr5:14010706-14010725 MsG0580025115.01.T01:CDS 35.0%
GATGTACTTATAAGGTCTGT+GGG + Chr5:14012698-14012717 MsG0580025115.01.T01:intron 35.0%
GCACTATACCACTATAACTT+CGG - Chr5:14012057-14012076 None:intergenic 35.0%
GCCTGTTGAAGAAAAGAATT+CGG - Chr5:14010610-14010629 None:intergenic 35.0%
GCTACTTGCTTTGATTAATG+GGG + Chr5:14015127-14015146 MsG0580025115.01.T01:intron 35.0%
GGACAAAACACTATTGTTCT+GGG - Chr5:14012026-14012045 None:intergenic 35.0%
GTCCAAATTGTACCCAAAAT+TGG - Chr5:14013526-14013545 None:intergenic 35.0%
GTCCATGAAATCACCAAATT+GGG + Chr5:14013242-14013261 MsG0580025115.01.T01:intron 35.0%
TCACAGTTCTTAAACATGGA+TGG + Chr5:14014361-14014380 MsG0580025115.01.T01:intron 35.0%
TCACTTATGTGAAATACTCG+TGG - Chr5:14011463-14011482 None:intergenic 35.0%
TCAGGAAAAGAGAAAATCTG+AGG + Chr5:14014838-14014857 MsG0580025115.01.T01:intron 35.0%
TCCATGAAATCACCAAATTG+GGG + Chr5:14013243-14013262 MsG0580025115.01.T01:intron 35.0%
TCTAGATGTGTCTCAAAGAA+TGG - Chr5:14013789-14013808 None:intergenic 35.0%
TCTTGCCTTAAGAGTTTCAA+TGG + Chr5:14012948-14012967 MsG0580025115.01.T01:CDS 35.0%
TGAAAATTGGTGTACTGTCA+CGG - Chr5:14012816-14012835 None:intergenic 35.0%
TGATCACATAAAACACCACA+TGG - Chr5:14014291-14014310 None:intergenic 35.0%
TGATGTACTTATAAGGTCTG+TGG + Chr5:14012697-14012716 MsG0580025115.01.T01:intron 35.0%
TGGAATTCTGGATTGAGATA+GGG + Chr5:14010842-14010861 MsG0580025115.01.T01:intron 35.0%
TGGACAAAACACTATTGTTC+TGG - Chr5:14012027-14012046 None:intergenic 35.0%
TGGTTCACAGTTCTTAAACA+TGG + Chr5:14014357-14014376 MsG0580025115.01.T01:intron 35.0%
TGTATCTGATATTCTTGCGT+CGG + Chr5:14015361-14015380 MsG0580025115.01.T01:CDS 35.0%
TGTCCATGAAATCACCAAAT+TGG + Chr5:14013241-14013260 MsG0580025115.01.T01:intron 35.0%
TTAAGCACAAACACAAACAC+CGG - Chr5:14011021-14011040 None:intergenic 35.0%
TTAGACATTGAAGTTCCATG+TGG + Chr5:14014273-14014292 MsG0580025115.01.T01:intron 35.0%
TTGAGAAATGACCTGAATGT+GGG + Chr5:14015175-14015194 MsG0580025115.01.T01:intron 35.0%
TTGATGCTTAATCCCCAATT+TGG - Chr5:14013258-14013277 None:intergenic 35.0%
TTGGAATTCTGGATTGAGAT+AGG + Chr5:14010841-14010860 MsG0580025115.01.T01:intron 35.0%
TTTGAGAAATGACCTGAATG+TGG + Chr5:14015174-14015193 MsG0580025115.01.T01:intron 35.0%
! AATTGTGTCATTGTTGTGTC+CGG + Chr5:14010999-14011018 MsG0580025115.01.T01:intron 35.0%
! ACCGAATTCTTTTCTTCAAC+AGG + Chr5:14010606-14010625 MsG0580025115.01.T01:intron 35.0%
! ACTGATTCAGGACTAGAAAT+AGG + Chr5:14012292-14012311 MsG0580025115.01.T01:intron 35.0%
! AGAACTCCAACTGTATTTTC+CGG - Chr5:14011101-14011120 None:intergenic 35.0%
! ATTTAGGTTAACCTGAGTCT+TGG - Chr5:14010734-14010753 None:intergenic 35.0%
! CTAGCACTCAGTCTTTTATT+GGG + Chr5:14014649-14014668 MsG0580025115.01.T01:intron 35.0%
! GCGCTTGATGTAGTTAATTT+TGG + Chr5:14012566-14012585 MsG0580025115.01.T01:CDS 35.0%
! TCTAGCACTCAGTCTTTTAT+TGG + Chr5:14014648-14014667 MsG0580025115.01.T01:intron 35.0%
! TGTGATGATGATGAAGATCA+AGG - Chr5:14010484-14010503 None:intergenic 35.0%
!! AACCTCAGATTGATTTGGAA+TGG - Chr5:14015518-14015537 None:intergenic 35.0%
!! AACTGGATATGATTTTGGTG+TGG + Chr5:14012900-14012919 MsG0580025115.01.T01:CDS 35.0%
!! AAGACAACTGATTTGATGGT+TGG + Chr5:14013102-14013121 MsG0580025115.01.T01:intron 35.0%
!! AGTACATCAGAAAGAGCATT+TGG - Chr5:14012686-14012705 None:intergenic 35.0%
!! ATTAGCTCTACTAAGTCACT+TGG + Chr5:14013732-14013751 MsG0580025115.01.T01:intron 35.0%
!! CCACTATTTTCTGGAAAACA+AGG + Chr5:14011338-14011357 MsG0580025115.01.T01:intron 35.0%
!! TATTTTCTGGAAAACAAGGG+TGG + Chr5:14011342-14011361 MsG0580025115.01.T01:intron 35.0%
!!! CCTTGTTTTCCAGAAAATAG+TGG - Chr5:14011341-14011360 None:intergenic 35.0%
AACGCTCTCCCTTAAATGAT+AGG + Chr5:14011592-14011611 MsG0580025115.01.T01:intron 40.0%
AAGCGATCTAGGCAAGATAT+TGG + Chr5:14011163-14011182 MsG0580025115.01.T01:CDS 40.0%
ACCCTAGAAATTCGCATGAT+AGG - Chr5:14010580-14010599 None:intergenic 40.0%
ACCCTATCATGCGAATTTCT+AGG + Chr5:14010575-14010594 MsG0580025115.01.T01:intron 40.0%
ACCTCTGTACTTATATGTGC+AGG + Chr5:14014940-14014959 MsG0580025115.01.T01:intron 40.0%
AGGGTAGATTGAAATCGAGA+GGG - Chr5:14010560-14010579 None:intergenic 40.0%
AGTTCTTAAACATGGATGGG+TGG + Chr5:14014365-14014384 MsG0580025115.01.T01:intron 40.0%
AGTTCTTATAATGGCCGGAA+AGG + Chr5:14011115-14011134 MsG0580025115.01.T01:CDS 40.0%
ATAAATTACCTCGAGCACCA+TGG - Chr5:14010528-14010547 None:intergenic 40.0%
ATAAGGCATATCTATTGGCC+AGG + Chr5:14012142-14012161 MsG0580025115.01.T01:intron 40.0%
ATAATCTCAATGAGAAGGCG+CGG - Chr5:14011934-14011953 None:intergenic 40.0%
CCCTAGAAATTCGCATGATA+GGG - Chr5:14010579-14010598 None:intergenic 40.0%
CCCTATCATGCGAATTTCTA+GGG + Chr5:14010576-14010595 MsG0580025115.01.T01:intron 40.0%
CCCTTCTATCAAAGATTTGC+TGG + Chr5:14015489-14015508 MsG0580025115.01.T01:CDS 40.0%
CGCAAGAATATCAGATACAC+GGG - Chr5:14015360-14015379 None:intergenic 40.0%
CGCTTCTAAATCTTCAACCA+TGG + Chr5:14010508-14010527 MsG0580025115.01.T01:exon 40.0%
CTAGCACTCACTCCTTTATT+GGG - Chr5:14014745-14014764 None:intergenic 40.0%
GATTCAGGACTAGAAATAGG+CGG + Chr5:14012295-14012314 MsG0580025115.01.T01:intron 40.0%
GCCAGCAAATCTTTGATAGA+AGG - Chr5:14015493-14015512 None:intergenic 40.0%
GGATTATTGTCTTTGCTGGA+AGG + Chr5:14012395-14012414 MsG0580025115.01.T01:CDS 40.0%
GTTCTTAAACATGGATGGGT+GGG + Chr5:14014366-14014385 MsG0580025115.01.T01:intron 40.0%
GTTCTTATAATGGCCGGAAA+GGG + Chr5:14011116-14011135 MsG0580025115.01.T01:CDS 40.0%
GTTGGAGTTCTTATAATGGC+CGG + Chr5:14011110-14011129 MsG0580025115.01.T01:CDS 40.0%
TAGGACCTACACTTCGAAAA+TGG + Chr5:14014683-14014702 MsG0580025115.01.T01:intron 40.0%
TAGGGTAGATTGAAATCGAG+AGG - Chr5:14010561-14010580 None:intergenic 40.0%
TATGTCCCACCACTTTATGT+GGG - Chr5:14014711-14014730 None:intergenic 40.0%
TCATGAACCGTTAGTTGCTA+TGG + Chr5:14015005-14015024 MsG0580025115.01.T01:intron 40.0%
TCCAAACTTGGATCCTGAAT+TGG + Chr5:14012924-14012943 MsG0580025115.01.T01:CDS 40.0%
TCCTGCACATATAAGTACAG+AGG - Chr5:14014944-14014963 None:intergenic 40.0%
TCGAATCCGGAAAATACAGT+TGG + Chr5:14011092-14011111 MsG0580025115.01.T01:CDS 40.0%
TCTAGCACTCACTCCTTTAT+TGG - Chr5:14014746-14014765 None:intergenic 40.0%
TTAAATCATGGCCAACTGCA+GGG - Chr5:14014093-14014112 None:intergenic 40.0%
! ACCAGGACACACTATTTTGT+TGG - Chr5:14013445-14013464 None:intergenic 40.0%
! CCAGGACACACTATTTTGTT+GGG - Chr5:14013444-14013463 None:intergenic 40.0%
! GAAAATTAGTGGGTCAAGCA+AGG - Chr5:14013169-14013188 None:intergenic 40.0%
! GACAGTACACCAATTTTCAC+TGG + Chr5:14012817-14012836 MsG0580025115.01.T01:intron 40.0%
! GCGCTAAATCCACTATTTTC+TGG + Chr5:14011329-14011348 MsG0580025115.01.T01:intron 40.0%
! GCTTGACCCACTAATTTTCA+TGG + Chr5:14013170-14013189 MsG0580025115.01.T01:intron 40.0%
! GGTGGAACTGGATATGATTT+TGG + Chr5:14012895-14012914 MsG0580025115.01.T01:CDS 40.0%
! TCCCCAATTTGGTGATTTCA+TGG - Chr5:14013247-14013266 None:intergenic 40.0%
!! AAGATATTGGCTTGCATGCA+TGG + Chr5:14011176-14011195 MsG0580025115.01.T01:CDS 40.0%
!! ATCTGAGGTTAGTCTTTCCA+TGG + Chr5:14015528-14015547 MsG0580025115.01.T01:CDS 40.0%
!! TTTTGGTGTGGATCCAAACT+TGG + Chr5:14012912-14012931 MsG0580025115.01.T01:CDS 40.0%
ACAAGATGCGACAATGACTG+AGG + Chr5:14013047-14013066 MsG0580025115.01.T01:CDS 45.0%
ACAATCTAGTCACGTCTGAC+TGG - Chr5:14015325-14015344 None:intergenic 45.0%
AGCAATGTAGCCTGTTGTAC+TGG - Chr5:14015067-14015086 None:intergenic 45.0%
AGGGTCATTTATGTCAACCC+CGG - Chr5:14015473-14015492 None:intergenic 45.0%
AGTAGGGGTAAGTCTTTGTC+AGG + Chr5:14014820-14014839 MsG0580025115.01.T01:intron 45.0%
ATCTTGCCTAGATCGCTTGT+AGG - Chr5:14011161-14011180 None:intergenic 45.0%
ATGGAACCCACATAAAGTGG+TGG + Chr5:14014702-14014721 MsG0580025115.01.T01:intron 45.0%
CAAAACACGAACACCCTTTC+CGG - Chr5:14011132-14011151 None:intergenic 45.0%
CAAGATGCGACAATGACTGA+GGG + Chr5:14013048-14013067 MsG0580025115.01.T01:CDS 45.0%
CAATGGAAGAGGAAAGAGCT+AGG + Chr5:14012965-14012984 MsG0580025115.01.T01:CDS 45.0%
CAGCTGGAACATGAACGATA+TGG - Chr5:14012661-14012680 None:intergenic 45.0%
CATATCGTTCATGTTCCAGC+TGG + Chr5:14012659-14012678 MsG0580025115.01.T01:CDS 45.0%
CCCAACAAAATAGTGTGTCC+TGG + Chr5:14013441-14013460 MsG0580025115.01.T01:intron 45.0%
CTACTAAGTCACTTGGCAGT+TGG + Chr5:14013739-14013758 MsG0580025115.01.T01:intron 45.0%
CTATAGAGAAGGGAAAGCCA+TGG + Chr5:14015210-14015229 MsG0580025115.01.T01:intron 45.0%
CTTAAATCATGGCCAACTGC+AGG - Chr5:14014094-14014113 None:intergenic 45.0%
CTTAAGGCAAGAGCCAATTC+AGG - Chr5:14012940-14012959 None:intergenic 45.0%
GAGAAAGAGGCAATGATGAC+AGG - Chr5:14013874-14013893 None:intergenic 45.0%
GATCATATCAGGCGAGAAAG+AGG - Chr5:14013887-14013906 None:intergenic 45.0%
GATGCTGCCAAACAAGAGAA+AGG + Chr5:14013018-14013037 MsG0580025115.01.T01:CDS 45.0%
GCAACAGTTTCTAAGCTGAC+TGG - Chr5:14013824-14013843 None:intergenic 45.0%
GCCAATTCAGGATCCAAGTT+TGG - Chr5:14012928-14012947 None:intergenic 45.0%
GCTTGAGCTTGAAATCGAGA+AGG - Chr5:14010685-14010704 None:intergenic 45.0%
GGGTAGATTGAAATCGAGAG+GGG - Chr5:14010559-14010578 None:intergenic 45.0%
GGTAGATTGAAATCGAGAGG+GGG - Chr5:14010558-14010577 None:intergenic 45.0%
GTATGTCCCACCACTTTATG+TGG - Chr5:14014712-14014731 None:intergenic 45.0%
GTCAGACGTGACTAGATTGT+TGG + Chr5:14015325-14015344 MsG0580025115.01.T01:CDS 45.0%
TAATTCCTTTGGCAGCTTCC+CGG + Chr5:14015451-14015470 MsG0580025115.01.T01:intron 45.0%
TACTATCCGCTACTGACAAC+TGG - Chr5:14015286-14015305 None:intergenic 45.0%
TGAAGCAAAGACTGAGAAGC+TGG + Chr5:14012598-14012617 MsG0580025115.01.T01:CDS 45.0%
TGAGCCTCCTTTCTCTTGTT+TGG - Chr5:14013028-14013047 None:intergenic 45.0%
TGGAACCCACATAAAGTGGT+GGG + Chr5:14014703-14014722 MsG0580025115.01.T01:intron 45.0%
TGGTATTCAGGTGGCACAAT+TGG + Chr5:14012336-14012355 MsG0580025115.01.T01:CDS 45.0%
! ACACCAATTTTCACTGGCGA+TGG + Chr5:14012823-14012842 MsG0580025115.01.T01:CDS 45.0%
! ACCAATTTTCACTGGCGATG+GGG + Chr5:14012825-14012844 MsG0580025115.01.T01:CDS 45.0%
! ATCGAGGCACTTCTCATTGA+TGG - Chr5:14014411-14014430 None:intergenic 45.0%
! CACAACACAGCTCCTTTTTG+AGG + Chr5:14014320-14014339 MsG0580025115.01.T01:intron 45.0%
! CACCAATTTTCACTGGCGAT+GGG + Chr5:14012824-14012843 MsG0580025115.01.T01:CDS 45.0%
! GAAAACAAGGGTGGCATTGA+TGG + Chr5:14011351-14011370 MsG0580025115.01.T01:intron 45.0%
! GGGTTCCATTTTCGAAGTGT+AGG - Chr5:14014691-14014710 None:intergenic 45.0%
!! TGCTTCAGAAGTTGATGCAC+TGG - Chr5:14013076-14013095 None:intergenic 45.0%
!! TGTCAGTAGCGGATAGTACA+GGG + Chr5:14015288-14015307 MsG0580025115.01.T01:intron 45.0%
!! TTGTCAGTAGCGGATAGTAC+AGG + Chr5:14015287-14015306 MsG0580025115.01.T01:intron 45.0%
!! TATGAAAATAATAATTAAAA+AGG - Chr5:14013569-14013588 None:intergenic 5.0%
AATTCCTTTGGCAGCTTCCC+GGG + Chr5:14015452-14015471 MsG0580025115.01.T01:intron 50.0%
AGCTCTCCAGTTGTCAGTAG+CGG + Chr5:14015277-14015296 MsG0580025115.01.T01:intron 50.0%
ATCTTCAACCATGGTGCTCG+AGG + Chr5:14010517-14010536 MsG0580025115.01.T01:exon 50.0%
CTGAAAGGAGGTGATCTACC+AGG - Chr5:14013462-14013481 None:intergenic 50.0%
GAACCTAGCTGCTGGTATTC+AGG + Chr5:14012324-14012343 MsG0580025115.01.T01:CDS 50.0%
GCAAGCGCTTGCAATGTCAA+TGG + Chr5:14014063-14014082 MsG0580025115.01.T01:CDS 50.0%
GCAGGAAGCTGCAGCAAAAA+AGG + Chr5:14012987-14013006 MsG0580025115.01.T01:CDS 50.0%
GCTGCCAAACAAGAGAAAGG+AGG + Chr5:14013021-14013040 MsG0580025115.01.T01:CDS 50.0%
GGGTCATTTATGTCAACCCC+GGG - Chr5:14015472-14015491 None:intergenic 50.0%
TAGAGAAGGGAAAGCCATGG+TGG + Chr5:14015213-14015232 MsG0580025115.01.T01:intron 50.0%
TCAATGGATGACCCTGCAGT+TGG + Chr5:14014079-14014098 MsG0580025115.01.T01:CDS 50.0%
TCCCCATCGCCAGTGAAAAT+TGG - Chr5:14012829-14012848 None:intergenic 50.0%
TTGTTTGGCAGCATCCTCTG+CGG - Chr5:14013013-14013032 None:intergenic 50.0%
! ATTTTCACTGGCGATGGGGA+AGG + Chr5:14012829-14012848 MsG0580025115.01.T01:CDS 50.0%
!! GAAAGAGCATTTGGACCAGC+TGG - Chr5:14012677-14012696 None:intergenic 50.0%
!! GTCAGTAGCGGATAGTACAG+GGG + Chr5:14015289-14015308 MsG0580025115.01.T01:intron 50.0%
!!! CGGAAAGGGTGTTCGTGTTT+TGG + Chr5:14011130-14011149 MsG0580025115.01.T01:CDS 50.0%
AGCGGATAGTACAGGGGATC+AGG + Chr5:14015295-14015314 MsG0580025115.01.T01:CDS 55.0%
ATCTCACCTAGTGCCAGCTC+AGG - Chr5:14014151-14014170 None:intergenic 55.0%
ATCTGCAGATGACCCTGAGC+TGG + Chr5:14014135-14014154 MsG0580025115.01.T01:CDS 55.0%
ATTCCTTTGGCAGCTTCCCG+GGG + Chr5:14015453-14015472 MsG0580025115.01.T01:intron 55.0%
CCACCTGAATACCAGCAGCT+AGG - Chr5:14012330-14012349 None:intergenic 55.0%
CCTAGCTGCTGGTATTCAGG+TGG + Chr5:14012327-14012346 MsG0580025115.01.T01:CDS 55.0%
GGAAGAGGAAAGAGCTAGGC+AGG + Chr5:14012969-14012988 MsG0580025115.01.T01:CDS 55.0%
GGTGAGATGAACCTAGCTGC+TGG + Chr5:14012316-14012335 MsG0580025115.01.T01:CDS 55.0%
GTCACGCCTACAAGCGATCT+AGG + Chr5:14011152-14011171 MsG0580025115.01.T01:CDS 55.0%
TCTCACCTAGTGCCAGCTCA+GGG - Chr5:14014150-14014169 None:intergenic 55.0%
TGCAGCAAAAAAGGCCGCAG+AGG + Chr5:14012996-14013015 MsG0580025115.01.T01:CDS 55.0%
! CATTTGCGGTGCCAAGACTC+AGG + Chr5:14010720-14010739 MsG0580025115.01.T01:CDS 55.0%
! TGCAAGCGCTTGCTGCAGTA+GGG - Chr5:14014056-14014075 None:intergenic 55.0%
! TTGCAAGCGCTTGCTGCAGT+AGG - Chr5:14014057-14014076 None:intergenic 55.0%
GATGACCCTGAGCTGGCACT+AGG + Chr5:14014142-14014161 MsG0580025115.01.T01:CDS 60.0%
TTCACTGGCGATGGGGAAGG+TGG + Chr5:14012832-14012851 MsG0580025115.01.T01:CDS 60.0%
CAACCCCGGGAAGCTGCCAA+AGG - Chr5:14015459-14015478 None:intergenic 65.0%
CTGCAGCTGCAGCTGCAGCT+GGG + Chr5:14012872-14012891 MsG0580025115.01.T01:CDS 65.0%
GGCGATGGGGAAGGTGGAAG+CGG + Chr5:14012838-14012857 MsG0580025115.01.T01:CDS 65.0%
TGCAGCTGCAGCTGCAGCAG+CGG - Chr5:14012869-14012888 None:intergenic 65.0%
TGCAGCTGCAGCTGCAGCTG+GGG + Chr5:14012873-14012892 MsG0580025115.01.T01:CDS 65.0%
GCAGCTGCAGCTGCAGCTGG+GGG + Chr5:14012874-14012893 MsG0580025115.01.T01:CDS 70.0%
GCTGCAGCTGCAGCTGCAGC+TGG + Chr5:14012871-14012890 MsG0580025115.01.T01:CDS 70.0%
GCTGCAGCTGGGGGTGGAAC+TGG + Chr5:14012883-14012902 MsG0580025115.01.T01:CDS 70.0%
GCTGCAGCTGCAGCTGGGGG+TGG + Chr5:14012877-14012896 MsG0580025115.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr5 gene 14010434 14015609 14010434 ID=MsG0580025115.01;Name=MsG0580025115.01
Chr5 mRNA 14010434 14015609 14010434 ID=MsG0580025115.01.T01;Parent=MsG0580025115.01;Name=MsG0580025115.01.T01;_AED=0.40;_eAED=0.42;_QI=93|0.87|0.77|1|0.87|0.77|9|0|403
Chr5 exon 14010434 14010538 14010434 ID=MsG0580025115.01.T01:exon:5681;Parent=MsG0580025115.01.T01
Chr5 exon 14010628 14010741 14010628 ID=MsG0580025115.01.T01:exon:5682;Parent=MsG0580025115.01.T01
Chr5 exon 14011092 14011197 14011092 ID=MsG0580025115.01.T01:exon:5683;Parent=MsG0580025115.01.T01
Chr5 exon 14012302 14012416 14012302 ID=MsG0580025115.01.T01:exon:5684;Parent=MsG0580025115.01.T01
Chr5 exon 14012502 14012711 14012502 ID=MsG0580025115.01.T01:exon:5685;Parent=MsG0580025115.01.T01
Chr5 exon 14012822 14013119 14012822 ID=MsG0580025115.01.T01:exon:5686;Parent=MsG0580025115.01.T01
Chr5 exon 14014040 14014163 14014040 ID=MsG0580025115.01.T01:exon:5687;Parent=MsG0580025115.01.T01
Chr5 exon 14015294 14015382 14015294 ID=MsG0580025115.01.T01:exon:5688;Parent=MsG0580025115.01.T01
Chr5 exon 14015466 14015609 14015466 ID=MsG0580025115.01.T01:exon:5689;Parent=MsG0580025115.01.T01
Chr5 five_prime_UTR 14010434 14010526 14010434 ID=MsG0580025115.01.T01:five_prime_utr;Parent=MsG0580025115.01.T01
Chr5 CDS 14010527 14010538 14010527 ID=MsG0580025115.01.T01:cds;Parent=MsG0580025115.01.T01
Chr5 CDS 14010628 14010741 14010628 ID=MsG0580025115.01.T01:cds;Parent=MsG0580025115.01.T01
Chr5 CDS 14011092 14011197 14011092 ID=MsG0580025115.01.T01:cds;Parent=MsG0580025115.01.T01
Chr5 CDS 14012302 14012416 14012302 ID=MsG0580025115.01.T01:cds;Parent=MsG0580025115.01.T01
Chr5 CDS 14012502 14012711 14012502 ID=MsG0580025115.01.T01:cds;Parent=MsG0580025115.01.T01
Chr5 CDS 14012822 14013119 14012822 ID=MsG0580025115.01.T01:cds;Parent=MsG0580025115.01.T01
Chr5 CDS 14014040 14014163 14014040 ID=MsG0580025115.01.T01:cds;Parent=MsG0580025115.01.T01
Chr5 CDS 14015294 14015382 14015294 ID=MsG0580025115.01.T01:cds;Parent=MsG0580025115.01.T01
Chr5 CDS 14015466 14015609 14015466 ID=MsG0580025115.01.T01:cds;Parent=MsG0580025115.01.T01
Gene Sequence

>MsG0580025115.01.T01

ATGGTGCTCGAGGCGACAATGATCTGTATTGACAATTCTGAATGGATGCGTAACGGAGATTATTCTCCTTCTCGATTTCAAGCTCAAGCTGATGCTGTTAATCTCATTTGCGGTGCCAAGACTCAGTCGAATCCGGAAAATACAGTTGGAGTTCTTATAATGGCCGGAAAGGGTGTTCGTGTTTTGGTCACGCCTACAAGCGATCTAGGCAAGATATTGGCTTGCATGCATGGACTAGAAATAGGCGGTGAGATGAACCTAGCTGCTGGTATTCAGGTGGCACAATTGGCTCTTAAGCATCGTCAAAATAAAAAGCAACATCAAAGGATTATTGTCTTTGCTGGAAGTCATGTGAAGCATGAAAAGAAAATGTTGGAGATGATAGGGAGAAAGTTGAAAAAGAATAGCGTAGCGCTTGATGTAGTTAATTTTGGTGAAGAAGATGAAGCAAAGACTGAGAAGCTGGAAGCACTTGTTGCAGCTGTGAACAATAATGATACGAGCCATATCGTTCATGTTCCAGCTGGTCCAAATGCTCTTTCTGATGTACTTATAAGTACACCAATTTTCACTGGCGATGGGGAAGGTGGAAGCGGTTTTGCCGCTGCTGCAGCTGCAGCTGCAGCTGGGGGTGGAACTGGATATGATTTTGGTGTGGATCCAAACTTGGATCCTGAATTGGCTCTTGCCTTAAGAGTTTCAATGGAAGAGGAAAGAGCTAGGCAGGAAGCTGCAGCAAAAAAGGCCGCAGAGGATGCTGCCAAACAAGAGAAAGGAGGCTCACAAGATGCGACAATGACTGAGGGTGCCAGTGCATCAACTTCTGAAGCAAACAATAAGACAACTGATTTGATGGATGATGAGAATGCCCTACTGCAGCAAGCGCTTGCAATGTCAATGGATGACCCTGCAGTTGGCCATGATTTAAGAGATACAGATATGTCAGAAGCATCTGCAGATGACCCTGAGCTGGCACTAGTAGCGGATAGTACAGGGGATCAGGCAAGCCAGTCAGACGTGACTAGATTGTTGGCAGATCAATCCCGTGTATCTGATATTCTTGCGTCGCTTCCCGGGGTTGACATAAATGACCCTTCTATCAAAGATTTGCTGGCATCCATTCCAAATCAATCTGAGGTTAGTCTTTCCATGGAAAAACATACTACATTGAATTTGAAACTAATTTTGCAGAAAATTTCAGCAGAAGAATAA

Protein sequence

>MsG0580025115.01.T01

MVLEATMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGVLIMAGKGVRVLVTPTSDLGKILACMHGLEIGGEMNLAAGIQVAQLALKHRQNKKQHQRIIVFAGSHVKHEKKMLEMIGRKLKKNSVALDVVNFGEEDEAKTEKLEALVAAVNNNDTSHIVHVPAGPNALSDVLISTPIFTGDGEGGSGFAAAAAAAAAGGGTGYDFGVDPNLDPELALALRVSMEEERARQEAAAKKAAEDAAKQEKGGSQDATMTEGASASTSEANNKTTDLMDDENALLQQALAMSMDDPAVGHDLRDTDMSEASADDPELALVADSTGDQASQSDVTRLLADQSRVSDILASLPGVDINDPSIKDLLASIPNQSEVSLSMEKHTTLNLKLILQKISAEE*