AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480018159.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018159.01.T01 MTR_8g060830 93.939 264 14 1 1 264 1 262 2.39e-154 438
MsG0480018159.01.T01 MTR_4g006550 92.803 264 17 1 1 264 1 262 5.42e-150 427
MsG0480018159.01.T01 MTR_4g006560 94.444 162 9 0 297 458 76 237 1.28e-110 326
MsG0480018159.01.T01 MTR_1g013120 44.848 165 84 4 297 457 72 233 7.14e-45 157
MsG0480018159.01.T01 MTR_5g080880 38.506 174 91 4 298 456 82 254 5.99e-27 110
MsG0480018159.01.T01 MTR_7g063520 37.037 162 90 4 304 457 97 254 2.54e-26 107
MsG0480018159.01.T01 MTR_5g080870 28.289 152 96 3 304 455 80 218 3.23e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480018159.01.T01 AT1G15870 58.896 163 64 2 297 458 82 242 5.57e-66 212
MsG0480018159.01.T01 AT1G80720 57.927 164 64 3 297 458 30 190 2.32e-59 193
MsG0480018159.01.T01 AT1G80720 57.927 164 64 3 297 458 82 242 4.37e-59 194
MsG0480018159.01.T01 AT4G31930 42.945 163 90 3 297 457 73 234 1.61e-39 142
MsG0480018159.01.T01 AT1G80700 43.373 166 91 2 12 177 13 175 8.30e-31 118
MsG0480018159.01.T01 AT1G80980 43.373 166 91 2 12 177 13 175 2.01e-30 117
MsG0480018159.01.T01 AT1G80980 43.373 166 91 2 12 177 13 175 2.01e-30 117
MsG0480018159.01.T01 AT3G55605 34.146 164 96 3 304 457 97 258 1.86e-23 99.8
MsG0480018159.01.T01 AT2G39795 32.692 156 103 1 304 457 95 250 2.93e-22 95.9
MsG0480018159.01.T01 AT5G02050 33.333 156 95 3 311 457 112 267 4.90e-22 95.9
MsG0480018159.01.T01 AT5G05990 27.976 168 106 2 304 456 91 258 2.51e-18 85.1
MsG0480018159.01.T01 AT4G32605 31.183 93 59 2 370 457 127 219 4.56e-12 65.9
MsG0480018159.01.T01 AT2G39790 29.630 162 96 6 302 456 89 239 4.19e-11 63.5

Find 108 sgRNAs with CRISPR-Local

Find 579 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGATTTGTGTCTATGTTAC+TGG 0.150398 4:-1017832 None:intergenic
TACTGCTTCAGCTGTATATT+TGG 0.193771 4:+1016948 MsG0480018159.01.T01:intron
ACTTGGTGCAGACAAATTTA+TGG 0.199430 4:-1017877 None:intergenic
CTTGGAGATATTGACAATTA+AGG 0.236484 4:-1022536 None:intergenic
TTAGGCTTTGTTTGCGTGTT+TGG 0.248552 4:+1018030 MsG0480018159.01.T01:CDS
ATTTGCCAATGAAAACATTA+AGG 0.265158 4:+1022426 MsG0480018159.01.T01:CDS
TCGCCTCCTTCTTCTTCATT+TGG 0.306887 4:+1014091 MsG0480018159.01.T01:five_prime_UTR
TTAAATGGGAAAGCTATCTT+TGG 0.315145 4:+1018323 MsG0480018159.01.T01:CDS
CGGACAGTATAGTGATAAAA+AGG 0.337671 4:+1022599 MsG0480018159.01.T01:CDS
GGATAGTCTTTACGATTTCT+TGG 0.338117 4:+1022953 MsG0480018159.01.T01:CDS
ATCTCTGACAGCTGGGGATC+AGG 0.342904 4:-1017741 None:intergenic
AGAATTAGATGAAGAAAGTA+AGG 0.364259 4:+1017980 MsG0480018159.01.T01:CDS
GTTGAAGCCACCATGTTTGA+TGG 0.365174 4:+1022448 MsG0480018159.01.T01:CDS
TTTACGATTTCTTGGAAGTA+AGG 0.369810 4:+1022961 MsG0480018159.01.T01:CDS
GTTGATTCTTTACAGGGAAC+TGG 0.376425 4:+1022917 MsG0480018159.01.T01:intron
TAGAGTGAAAAGAGGATGTT+TGG 0.377537 4:+1016365 MsG0480018159.01.T01:exon
AAGTACAAAAGGCACTTCTC+TGG 0.386193 4:-1016460 None:intergenic
TCTCTTTCATCTCTGACAGC+TGG 0.386400 4:-1017749 None:intergenic
CCTCCTTCTTCTTCATTTGG+TGG 0.387305 4:+1014094 MsG0480018159.01.T01:five_prime_UTR
GGGAAGGGAAAGGAGGGCTT+TGG 0.387355 4:+1018055 MsG0480018159.01.T01:CDS
CTCTTTCATCTCTGACAGCT+GGG 0.395146 4:-1017748 None:intergenic
GGAACTGGATGATGAGTTGC+AGG 0.401530 4:+1022932 MsG0480018159.01.T01:CDS
AATCATGTGCTCTGCTTGGC+CGG 0.413847 4:+1022579 MsG0480018159.01.T01:CDS
TTTGCCTGCATGCCTTCCTT+GGG 0.414653 4:+1016808 MsG0480018159.01.T01:CDS
ATAGACACAAATCAGGTAAC+TGG 0.424363 4:+1017840 MsG0480018159.01.T01:CDS
TTCGGTTCATTTGTGGTGGA+TGG 0.428242 4:+1022367 MsG0480018159.01.T01:CDS
TGACAAGTTCGGTTCATTTG+TGG 0.433809 4:+1022360 MsG0480018159.01.T01:CDS
GGCTTTGTTTGCGTGTTTGG+AGG 0.435598 4:+1018033 MsG0480018159.01.T01:CDS
TGCTTCAGCTGTATATTTGG+TGG 0.443339 4:+1016951 MsG0480018159.01.T01:intron
CATAGGAAGTGGAGGAGAAA+AGG 0.454618 4:+1017643 MsG0480018159.01.T01:intron
GGCGACAGCAGCAGCTTGGT+CGG 0.471578 4:-1014073 None:intergenic
TTTGGAGGGGAAGGGAAAGG+AGG 0.473919 4:+1018048 MsG0480018159.01.T01:CDS
TTGCAGCCTACTGACAAGTT+CGG 0.474006 4:+1022349 MsG0480018159.01.T01:intron
GTTCTTTGCCGAAGTACAAA+AGG 0.477015 4:-1016471 None:intergenic
AATGTAATCCATCGCTCACC+GGG 0.484386 4:-1022394 None:intergenic
CCAACACTGTCTTGTTCGAC+TGG 0.484860 4:-1017930 None:intergenic
GCTTTGTTTGCGTGTTTGGA+GGG 0.486551 4:+1018034 MsG0480018159.01.T01:CDS
AAGTAAACTTACTCAAAGTC+AGG 0.487021 4:-1022670 None:intergenic
TTGTTGCATAATGATGTTGT+TGG 0.492854 4:-1016431 None:intergenic
CAATGTAATCCATCGCTCAC+CGG 0.493071 4:-1022395 None:intergenic
GAAGGAAGAAGAAGAAGCAA+AGG 0.498324 4:+1017671 MsG0480018159.01.T01:CDS
CTCAAAGTCAGGACCAGCAT+AGG 0.500380 4:-1022659 None:intergenic
GTTTGCGTGTTTGGAGGGGA+AGG 0.500707 4:+1018039 MsG0480018159.01.T01:CDS
CAAGGGAGATGGTCATGTGC+TGG 0.502080 4:+1022555 MsG0480018159.01.T01:CDS
GAACTGCCACTCGTGTTACT+TGG 0.506172 4:-1017894 None:intergenic
GTGTTTGGAGGGGAAGGGAA+AGG 0.507702 4:+1018045 MsG0480018159.01.T01:CDS
CTGTCGTCCCGCTTTGACGT+AGG 0.509984 4:+1018266 MsG0480018159.01.T01:CDS
CAGCACATGACCATCTCCCT+TGG 0.512206 4:-1022554 None:intergenic
ATCTTCCCCTACGTCAAAGC+GGG 0.513232 4:-1018273 None:intergenic
AACAGAGATCATAGGATGGA+TGG 0.515569 4:+1023040 MsG0480018159.01.T01:CDS
CAGTAACATAGACACAAATC+AGG 0.516463 4:+1017833 MsG0480018159.01.T01:CDS
GGAGGAGAAAAGGAAGCAGA+AGG 0.518581 4:+1017653 MsG0480018159.01.T01:CDS
AAGGAGAAAACAGAGATCAT+AGG 0.519039 4:+1023032 MsG0480018159.01.T01:CDS
CAAAGCCTAAGAAAAGAACT+TGG 0.519757 4:-1018017 None:intergenic
AGGAGGCGACAGCAGCAGCT+TGG 0.521003 4:-1014077 None:intergenic
GTCAATATCTCCAAGGGAGA+TGG 0.521988 4:+1022544 MsG0480018159.01.T01:CDS
CGAACAAGACAGTGTTGGTA+AGG 0.522003 4:+1017935 MsG0480018159.01.T01:CDS
TTACGATTTCTTGGAAGTAA+GGG 0.523724 4:+1022962 MsG0480018159.01.T01:CDS
TGGAAATCATGTGCTCTGCT+TGG 0.524404 4:+1022575 MsG0480018159.01.T01:CDS
AGCAGCAGCTTGGTCGGAGA+CGG 0.524554 4:-1014067 None:intergenic
CATACCCAAGGAAGGCATGC+AGG 0.524912 4:-1016812 None:intergenic
TGTCGTCCCGCTTTGACGTA+GGG 0.524971 4:+1018267 MsG0480018159.01.T01:CDS
ATCAGTGAAAAGCATCTTGA+GGG 0.525145 4:-1016579 None:intergenic
TTGGAGGGGAAGGGAAAGGA+GGG 0.525586 4:+1018049 MsG0480018159.01.T01:CDS
CAGCTTGGTCGGAGACGGAA+TGG 0.526153 4:-1014062 None:intergenic
CAAGTTCGGTTCATTTGTGG+TGG 0.534990 4:+1022363 MsG0480018159.01.T01:CDS
AGTACAAAAGGCACTTCTCT+GGG 0.539480 4:-1016459 None:intergenic
CTACGTCAAAGCGGGACGAC+AGG 0.539703 4:-1018265 None:intergenic
ATGACAGCTGAGCCCTATGC+TGG 0.544341 4:+1022646 MsG0480018159.01.T01:CDS
GAAACTTGAAGAGACTGTAA+AGG 0.544551 4:+1017779 MsG0480018159.01.T01:CDS
TTTGCGTGTTTGGAGGGGAA+GGG 0.545631 4:+1018040 MsG0480018159.01.T01:CDS
ATGGCCGACCCGGTGAGCGA+TGG 0.552023 4:+1022386 MsG0480018159.01.T01:CDS
TTTGTGGTGGATGGCCGACC+CGG 0.552350 4:+1022376 MsG0480018159.01.T01:CDS
CTTTGTTTGCGTGTTTGGAG+GGG 0.556663 4:+1018035 MsG0480018159.01.T01:CDS
GGAGACGGAATGGACGGCGC+CGG 0.563890 4:-1014052 None:intergenic
ACACCACCAAATGAAGAAGA+AGG 0.564734 4:-1014097 None:intergenic
CTTAATTGTCAATATCTCCA+AGG 0.564925 4:+1022537 MsG0480018159.01.T01:CDS
TCGTTATGAAATCAGAAGAA+TGG 0.565432 4:+1016984 MsG0480018159.01.T01:CDS
TGTTTGGCAGCGGAAGGAGG+TGG 0.566252 4:+1016381 MsG0480018159.01.T01:CDS
TCAAAGTCAGGACCAGCATA+GGG 0.570818 4:-1022658 None:intergenic
TTAATTGTCAATATCTCCAA+GGG 0.571494 4:+1022538 MsG0480018159.01.T01:CDS
TACGATTTCTTGGAAGTAAG+GGG 0.573631 4:+1022963 MsG0480018159.01.T01:CDS
AGAGGATGTTTGGCAGCGGA+AGG 0.574708 4:+1016375 MsG0480018159.01.T01:exon
GTCGTCCCGCTTTGACGTAG+GGG 0.587036 4:+1018268 MsG0480018159.01.T01:CDS
AGGATAATTCTCTCAAGTCA+AGG 0.597590 4:+1017955 MsG0480018159.01.T01:CDS
TGAAATCAGAAGAATGGAAG+CGG 0.598870 4:+1016990 MsG0480018159.01.T01:CDS
TCTTTCATCTCTGACAGCTG+GGG 0.600054 4:-1017747 None:intergenic
TAATCCATCGCTCACCGGGT+CGG 0.605600 4:-1022390 None:intergenic
TTGGTCGGAGACGGAATGGA+CGG 0.606586 4:-1014058 None:intergenic
GATCAGTGAAAAGCATCTTG+AGG 0.607209 4:-1016580 None:intergenic
TGAAGAAAGTAAGGGTTCAG+TGG 0.608234 4:+1017989 MsG0480018159.01.T01:CDS
GAAAAGAGGATGTTTGGCAG+CGG 0.612545 4:+1016371 MsG0480018159.01.T01:exon
GGATGTTTGGCAGCGGAAGG+AGG 0.614484 4:+1016378 MsG0480018159.01.T01:exon
AGAAAACAGAGATCATAGGA+TGG 0.614854 4:+1023036 MsG0480018159.01.T01:CDS
AGGTCGTCATCACTGATGAA+AGG 0.615459 4:+1016522 MsG0480018159.01.T01:CDS
TATGCTATCATACCCAAGGA+AGG 0.619907 4:-1016820 None:intergenic
AGGAACAGCTCCATCAAACA+TGG 0.627059 4:-1022458 None:intergenic
GATCATAGGATGGATGGAGA+AGG 0.628625 4:+1023046 MsG0480018159.01.T01:CDS
AATGAACCGAACTTGTCAGT+AGG 0.644093 4:-1022355 None:intergenic
AATCACTTCATAGGAAGTGG+AGG 0.644797 4:+1017635 MsG0480018159.01.T01:intron
CCAGTCGAACAAGACAGTGT+TGG 0.650294 4:+1017930 MsG0480018159.01.T01:CDS
GAATTAGATGAAGAAAGTAA+GGG 0.667127 4:+1017981 MsG0480018159.01.T01:CDS
AGTGAAAAGCATCTTGAGGG+CGG 0.673957 4:-1016576 None:intergenic
CCACCAAATGAAGAAGAAGG+AGG 0.678294 4:-1014094 None:intergenic
AATCTTCCCCTACGTCAAAG+CGG 0.687525 4:-1018274 None:intergenic
AACAGCTCCATCAAACATGG+TGG 0.722000 4:-1022455 None:intergenic
TCTGCACCAAGTAACACGAG+TGG 0.730265 4:+1017888 MsG0480018159.01.T01:CDS
GCATCAGTACATGAAACACA+AGG 0.733324 4:+1023013 MsG0480018159.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGAAAAAAAAAATAGATT+AGG - Chr4:1014178-1014197 None:intergenic 10.0%
!! TTATATATTAAAAGCTTAAT+AGG - Chr4:1015392-1015411 None:intergenic 10.0%
!!! AGAATTTCTATTTATATTTT+TGG - Chr4:1016731-1016750 None:intergenic 10.0%
!!! AGATGTTTTAAATTTATTTT+TGG + Chr4:1018964-1018983 MsG0480018159.01.T01:intron 10.0%
!!! ATTTAAGACTATTTTTATTT+TGG - Chr4:1019459-1019478 None:intergenic 10.0%
!!! TATTTATAAAATCATTTTGA+TGG + Chr4:1019430-1019449 MsG0480018159.01.T01:intron 10.0%
!!! TTTAAGACTATTTTTATTTT+GGG - Chr4:1019458-1019477 None:intergenic 10.0%
!!! TTTTACTAATACTATTTATT+AGG + Chr4:1017466-1017485 MsG0480018159.01.T01:intron 10.0%
!! AAAAACAAAGTAAAAACAAA+AGG + Chr4:1019153-1019172 MsG0480018159.01.T01:intron 15.0%
!! AAAATTAAAAGATCATCAAA+AGG - Chr4:1016638-1016657 None:intergenic 15.0%
!! AAATTAAAAGATCATCAAAA+GGG - Chr4:1016637-1016656 None:intergenic 15.0%
!! AATGAATTCTATATAATGTT+TGG + Chr4:1017400-1017419 MsG0480018159.01.T01:intron 15.0%
!! AGAAATAAAAAAATACTTAC+AGG - Chr4:1019779-1019798 None:intergenic 15.0%
!! ATACAATCAATTTCAAAATA+CGG - Chr4:1021899-1021918 None:intergenic 15.0%
!! ATATAATGTAAATCCAAAAT+TGG + Chr4:1018568-1018587 MsG0480018159.01.T01:intron 15.0%
!! ATATTAGACAAATAGAAATT+AGG - Chr4:1015190-1015209 None:intergenic 15.0%
!! GTGATAATAATATAAATTTG+TGG + Chr4:1019101-1019120 MsG0480018159.01.T01:intron 15.0%
!! TTTAAATAAACTCAAGAAAT+AGG - Chr4:1014246-1014265 None:intergenic 15.0%
!!! AAAGCTTAATTTTACAAAAT+CGG - Chr4:1020421-1020440 None:intergenic 15.0%
!!! AGAACTTTTTACTTTTTTTA+AGG + Chr4:1019884-1019903 MsG0480018159.01.T01:intron 15.0%
!!! ATATAAAGAATCTTTTTGAT+TGG - Chr4:1020733-1020752 None:intergenic 15.0%
!!! ATGATGTTTTTATTTCTAAA+AGG + Chr4:1022163-1022182 MsG0480018159.01.T01:intron 15.0%
!!! ATTTTGTAAAATTAAGCTTT+AGG + Chr4:1020421-1020440 MsG0480018159.01.T01:intron 15.0%
!!! CAACTTAATTTTTTAAAATC+AGG - Chr4:1021072-1021091 None:intergenic 15.0%
!!! CTAATTTTTTATCATTTCAT+TGG - Chr4:1016335-1016354 None:intergenic 15.0%
!!! TAAAAGCTTTTTAAGTTTTA+AGG + Chr4:1015135-1015154 MsG0480018159.01.T01:intron 15.0%
!!! TAGAATATTTAGAATTTGTT+TGG + Chr4:1021462-1021481 MsG0480018159.01.T01:intron 15.0%
!!! TATGTTTTGTAACAATTTTT+TGG + Chr4:1016230-1016249 MsG0480018159.01.T01:intron 15.0%
!!! TTAAGACTATTTTTATTTTG+GGG - Chr4:1019457-1019476 None:intergenic 15.0%
!!! TTTATATTTTGTTATAGACA+TGG + Chr4:1020746-1020765 MsG0480018159.01.T01:intron 15.0%
!!! TTTCTTCTTAAAATTTTTGT+TGG + Chr4:1018625-1018644 MsG0480018159.01.T01:intron 15.0%
!! AAATAACAAATACTTACGAA+GGG - Chr4:1015513-1015532 None:intergenic 20.0%
!! AAATAATACTATCATCCTTT+GGG + Chr4:1017578-1017597 MsG0480018159.01.T01:intron 20.0%
!! AACAATATGATTTCAACTTT+AGG - Chr4:1019307-1019326 None:intergenic 20.0%
!! AATTAAAAGATCATCAAAAG+GGG - Chr4:1016636-1016655 None:intergenic 20.0%
!! ATTCAGATTAAGAAAATAGT+TGG - Chr4:1021339-1021358 None:intergenic 20.0%
!! ATTTACATTATATCATCCAT+GGG - Chr4:1018561-1018580 None:intergenic 20.0%
!! CTCTCAATTTAATAAATTCA+TGG + Chr4:1019077-1019096 MsG0480018159.01.T01:intron 20.0%
!! GAAATGATAAAAAATTAGCT+GGG + Chr4:1016337-1016356 MsG0480018159.01.T01:five_prime_UTR 20.0%
!! TAAAAAAATACTTACAGGAT+TGG - Chr4:1019774-1019793 None:intergenic 20.0%
!! TAAAAAAGGATATATAATCC+AGG - Chr4:1017504-1017523 None:intergenic 20.0%
!! TAAAGCCTATTTACTTAAAT+AGG + Chr4:1015321-1015340 MsG0480018159.01.T01:intron 20.0%
!! TAAATAACAAATACTTACGA+AGG - Chr4:1015514-1015533 None:intergenic 20.0%
!! TAATAACTATTCTCTTCTTA+AGG - Chr4:1018221-1018240 None:intergenic 20.0%
!! TAGGATTTATAATAACCAAA+TGG - Chr4:1019510-1019529 None:intergenic 20.0%
!! TGAAATGATAAAAAATTAGC+TGG + Chr4:1016336-1016355 MsG0480018159.01.T01:five_prime_UTR 20.0%
!! TTATGAAAATAAGCTCAAAA+CGG + Chr4:1020168-1020187 MsG0480018159.01.T01:intron 20.0%
!! TTTGGTATAACTTAAGAAAA+CGG - Chr4:1020252-1020271 None:intergenic 20.0%
!!! AAAAATAGTCTTAAATCTCA+GGG + Chr4:1019463-1019482 MsG0480018159.01.T01:intron 20.0%
!!! AAATTTTACCATATCAATTC+AGG + Chr4:1017119-1017138 MsG0480018159.01.T01:intron 20.0%
!!! AAGATTTTGAGTTTATTGTA+AGG + Chr4:1018291-1018310 MsG0480018159.01.T01:CDS 20.0%
!!! AATTATGTTAATTTGTGTTG+TGG + Chr4:1016160-1016179 MsG0480018159.01.T01:intron 20.0%
!!! AATTTTACCATATCAATTCA+GGG + Chr4:1017120-1017139 MsG0480018159.01.T01:intron 20.0%
!!! AATTTTTTAAAATCAGGCAT+GGG - Chr4:1021066-1021085 None:intergenic 20.0%
!!! ACTATTGCATAATAGAATTT+TGG + Chr4:1022855-1022874 MsG0480018159.01.T01:intron 20.0%
!!! AGTAGCTCTAAATATTTTAT+TGG - Chr4:1021787-1021806 None:intergenic 20.0%
!!! AGTTAAACTGTTTTTTGTAT+AGG + Chr4:1020566-1020585 MsG0480018159.01.T01:intron 20.0%
!!! ATTTTGCAAAATAAAGTTGT+GGG + Chr4:1021383-1021402 MsG0480018159.01.T01:intron 20.0%
!!! CAACTTAATTTTACAAAATC+AGG - Chr4:1021640-1021659 None:intergenic 20.0%
!!! CCAAAATAGTATATTTTCAT+CGG - Chr4:1021855-1021874 None:intergenic 20.0%
!!! TAAAAATAGTCTTAAATCTC+AGG + Chr4:1019462-1019481 MsG0480018159.01.T01:intron 20.0%
!!! TAAGACTATTTTTATTTTGG+GGG - Chr4:1019456-1019475 None:intergenic 20.0%
!!! TAAGGAAGGAAATTTTAAAT+GGG + Chr4:1018309-1018328 MsG0480018159.01.T01:CDS 20.0%
!!! TAATTTTACAAAATCAGGTA+TGG - Chr4:1021635-1021654 None:intergenic 20.0%
!!! TAATTTTTTAAAATCAGGCA+TGG - Chr4:1021067-1021086 None:intergenic 20.0%
!!! TGTAAAATAGGCTTTTAAAT+AGG + Chr4:1015617-1015636 MsG0480018159.01.T01:intron 20.0%
!!! TGTATTATTGATGATGAAAA+AGG - Chr4:1014863-1014882 None:intergenic 20.0%
!!! TGTTTTTACTTTGTTTTTGT+AGG - Chr4:1019151-1019170 None:intergenic 20.0%
!!! TTACTTTTTTTAAGGTAGTT+TGG + Chr4:1019892-1019911 MsG0480018159.01.T01:intron 20.0%
!!! TTATTTAGAATTCATGTAGT+TGG - Chr4:1018917-1018936 None:intergenic 20.0%
!!! TTCTTAATCTGAATGTTTTT+AGG + Chr4:1021345-1021364 MsG0480018159.01.T01:intron 20.0%
!!! TTGATGAGAAAATTTTTAGT+TGG + Chr4:1018782-1018801 MsG0480018159.01.T01:intron 20.0%
!!! TTTAGCTTTTTCCTAAATAT+CGG + Chr4:1021427-1021446 MsG0480018159.01.T01:intron 20.0%
!!! TTTTTTTATCAAGGTAGAAA+GGG + Chr4:1021598-1021617 MsG0480018159.01.T01:intron 20.0%
! AAAGGAGAAAGAAAAAGAAT+TGG + Chr4:1017689-1017708 MsG0480018159.01.T01:CDS 25.0%
! AAATGAAGAAAACAGTGAAA+AGG - Chr4:1014142-1014161 None:intergenic 25.0%
! AACATCTTGTGTAAAAAACA+GGG + Chr4:1020920-1020939 MsG0480018159.01.T01:intron 25.0%
! AAGGATGTGAAGTATAATAA+AGG + Chr4:1015154-1015173 MsG0480018159.01.T01:intron 25.0%
! AAGTTGTTTATCCAAAAACA+GGG - Chr4:1020014-1020033 None:intergenic 25.0%
! AATAATACTATCATCCTTTG+GGG + Chr4:1017579-1017598 MsG0480018159.01.T01:intron 25.0%
! AATTCACTCTTACATTACAA+AGG - Chr4:1017029-1017048 None:intergenic 25.0%
! ACAGTTTCAGCAAATAAAAA+AGG - Chr4:1017518-1017537 None:intergenic 25.0%
! AGAATTAGATGAAGAAAGTA+AGG + Chr4:1017980-1017999 MsG0480018159.01.T01:CDS 25.0%
! AGGATGTGAAGTATAATAAA+GGG + Chr4:1015155-1015174 MsG0480018159.01.T01:intron 25.0%
! AGTATATCAATTATGCTTGA+AGG + Chr4:1015057-1015076 MsG0480018159.01.T01:intron 25.0%
! AGTTGAAATTGAATGGATAA+TGG + Chr4:1021574-1021593 MsG0480018159.01.T01:intron 25.0%
! ATAAGCAATTGGAAATTGTT+TGG - Chr4:1020270-1020289 None:intergenic 25.0%
! ATATAGATGCTCAAATCAAT+CGG + Chr4:1014970-1014989 MsG0480018159.01.T01:intron 25.0%
! ATATTAAAAGCTTAATAGGC+CGG - Chr4:1015388-1015407 None:intergenic 25.0%
! ATCTTCAGATTTAGAAATGA+TGG - Chr4:1019021-1019040 None:intergenic 25.0%
! ATGAGATACAATACAAGTTT+AGG + Chr4:1017334-1017353 MsG0480018159.01.T01:intron 25.0%
! ATTCTTCAAATTCAAAACCA+TGG - Chr4:1016130-1016149 None:intergenic 25.0%
! ATTTGCCAATGAAAACATTA+AGG + Chr4:1022426-1022445 MsG0480018159.01.T01:CDS 25.0%
! CAAAAAAAAATTGCACAAGA+TGG - Chr4:1016792-1016811 None:intergenic 25.0%
! CCAATTTAATGTACTCTTTA+TGG + Chr4:1017145-1017164 MsG0480018159.01.T01:intron 25.0%
! CCATAATTTATTTATGCCAA+AGG - Chr4:1015957-1015976 None:intergenic 25.0%
! CCTTTGGCATAAATAAATTA+TGG + Chr4:1015954-1015973 MsG0480018159.01.T01:intron 25.0%
! CTATTTAGTAGCAGATATAT+TGG + Chr4:1015478-1015497 MsG0480018159.01.T01:intron 25.0%
! CTTGTAGACATGAATAATTA+GGG + Chr4:1022314-1022333 MsG0480018159.01.T01:intron 25.0%
! GAAATAATACTATCATCCTT+TGG + Chr4:1017577-1017596 MsG0480018159.01.T01:intron 25.0%
! GAATTAGATGAAGAAAGTAA+GGG + Chr4:1017981-1018000 MsG0480018159.01.T01:CDS 25.0%
! GATTTACATTATATCATCCA+TGG - Chr4:1018562-1018581 None:intergenic 25.0%
! GGAGAAAATTCATTATCAAA+AGG - Chr4:1017614-1017633 None:intergenic 25.0%
! GGATTGAAATTGTTAATTGA+TGG + Chr4:1014215-1014234 MsG0480018159.01.T01:intron 25.0%
! GTATTTGGTTACAATGTTTA+TGG + Chr4:1016701-1016720 MsG0480018159.01.T01:intron 25.0%
! GTTATTAAATTATGCCTTAC+AGG + Chr4:1018234-1018253 MsG0480018159.01.T01:intron 25.0%
! GTTGTCTTGAGATATTAATT+TGG + Chr4:1018438-1018457 MsG0480018159.01.T01:intron 25.0%
! TAAACATTGTAACCAAATAC+AGG - Chr4:1016701-1016720 None:intergenic 25.0%
! TAAATCATTGGTCAAATCAA+TGG - Chr4:1016258-1016277 None:intergenic 25.0%
! TAAGACTCTGTTTGAATAAA+GGG - Chr4:1020985-1021004 None:intergenic 25.0%
! TAAGTTGTTTATCCAAAAAC+AGG - Chr4:1020015-1020034 None:intergenic 25.0%
! TAGTTAGAACTAGAGTTAAA+GGG - Chr4:1021938-1021957 None:intergenic 25.0%
! TAGTTTCTTCCTAATAATCA+GGG + Chr4:1021687-1021706 MsG0480018159.01.T01:intron 25.0%
! TATATATTTATGTGTGTGAC+TGG + Chr4:1015900-1015919 MsG0480018159.01.T01:intron 25.0%
! TCAAAATACGGTTATAAAAG+TGG - Chr4:1021887-1021906 None:intergenic 25.0%
! TCTTCAGATTTAGAAATGAT+GGG - Chr4:1019020-1019039 None:intergenic 25.0%
! TCTTGTAGACATGAATAATT+AGG + Chr4:1022313-1022332 MsG0480018159.01.T01:intron 25.0%
! TGATACCATTTGTTCAAATT+CGG - Chr4:1022778-1022797 None:intergenic 25.0%
! TGTAAAGAATCAACATTAAG+AGG - Chr4:1022911-1022930 None:intergenic 25.0%
! TTAATTGTCAATATCTCCAA+GGG + Chr4:1022538-1022557 MsG0480018159.01.T01:CDS 25.0%
! TTAGTTAGAACTAGAGTTAA+AGG - Chr4:1021939-1021958 None:intergenic 25.0%
! TTTGAATTTGAAGAATGAGT+TGG + Chr4:1016134-1016153 MsG0480018159.01.T01:intron 25.0%
!! AAAATAGTCTTAAATCTCAG+GGG + Chr4:1019464-1019483 MsG0480018159.01.T01:intron 25.0%
!! AAGTCATATTTGTGTGTTTT+AGG + Chr4:1015538-1015557 MsG0480018159.01.T01:intron 25.0%
!! ACTTATTTGAGTTTATCTAG+TGG - Chr4:1020294-1020313 None:intergenic 25.0%
!! ATATTAATTTGGATGCATCA+TGG + Chr4:1018449-1018468 MsG0480018159.01.T01:intron 25.0%
!! ATTTTACCATATCAATTCAG+GGG + Chr4:1017121-1017140 MsG0480018159.01.T01:intron 25.0%
!! CCATAAAGAGTACATTAAAT+TGG - Chr4:1017148-1017167 None:intergenic 25.0%
!! CCGATGAAAATATACTATTT+TGG + Chr4:1021852-1021871 MsG0480018159.01.T01:intron 25.0%
!! CGATTTTTCCAAAATATTAC+CGG - Chr4:1014352-1014371 None:intergenic 25.0%
!! GATTTTGCAAAATAAAGTTG+TGG + Chr4:1021382-1021401 MsG0480018159.01.T01:intron 25.0%
!! GTAAGGAAGGAAATTTTAAA+TGG + Chr4:1018308-1018327 MsG0480018159.01.T01:CDS 25.0%
!! TAAAAGCCTATTTTACACTA+AGG - Chr4:1015614-1015633 None:intergenic 25.0%
!! TAGATTGATTCATTTCCATT+TGG + Chr4:1019492-1019511 MsG0480018159.01.T01:intron 25.0%
!! TGAGTTTTTACTTTCTTGAA+GGG + Chr4:1014600-1014619 MsG0480018159.01.T01:intron 25.0%
!! TTCAACCTTAATGTTTTCAT+TGG - Chr4:1022434-1022453 None:intergenic 25.0%
!! TTGAGTTTTTACTTTCTTGA+AGG + Chr4:1014599-1014618 MsG0480018159.01.T01:intron 25.0%
!!! AAAAAAGTTAAGTGGGTTAA+GGG + Chr4:1018753-1018772 MsG0480018159.01.T01:intron 25.0%
!!! AACTTAACTTGCTATAGATA+TGG + Chr4:1021272-1021291 MsG0480018159.01.T01:intron 25.0%
!!! CAACTTTATTTTGCAAAATC+AGG - Chr4:1021382-1021401 None:intergenic 25.0%
!!! CTTAATGTTGATTCTTTACA+GGG + Chr4:1022911-1022930 MsG0480018159.01.T01:intron 25.0%
!!! CTTTTTTTATCAAGGTAGAA+AGG + Chr4:1021597-1021616 MsG0480018159.01.T01:intron 25.0%
!!! GATAATGGCTTTTTTTATCA+AGG + Chr4:1021589-1021608 MsG0480018159.01.T01:intron 25.0%
!!! GATTTTAATTTCCCTGTTTT+TGG + Chr4:1020000-1020019 MsG0480018159.01.T01:intron 25.0%
!!! TCTTAATGTTGATTCTTTAC+AGG + Chr4:1022910-1022929 MsG0480018159.01.T01:intron 25.0%
!!! TTAGCTTTTTCCTAAATATC+GGG + Chr4:1021428-1021447 MsG0480018159.01.T01:intron 25.0%
!!! TTGAAGACTTGATATTTTGA+TGG + Chr4:1022130-1022149 MsG0480018159.01.T01:intron 25.0%
!!! TTTTGAGTTTATTGTAAGGA+AGG + Chr4:1018295-1018314 MsG0480018159.01.T01:CDS 25.0%
AAAACAGTGAAAAGGTGAAT+GGG - Chr4:1014134-1014153 None:intergenic 30.0%
AAAATACTTACAGGATTGGA+AGG - Chr4:1019770-1019789 None:intergenic 30.0%
AAATAAGCTCAAAACGGTTT+AGG + Chr4:1020174-1020193 MsG0480018159.01.T01:intron 30.0%
AAATAGGCCAAAACTTATGA+AGG - Chr4:1015564-1015583 None:intergenic 30.0%
AAGAACTGAGATATTGAATG+TGG + Chr4:1018599-1018618 MsG0480018159.01.T01:intron 30.0%
AAGTAAACTTACTCAAAGTC+AGG - Chr4:1022673-1022692 None:intergenic 30.0%
AATAGCCGAATTTGAACAAA+TGG + Chr4:1022770-1022789 MsG0480018159.01.T01:intron 30.0%
AATGGGAATTTGGTTGATTA+GGG - Chr4:1019597-1019616 None:intergenic 30.0%
AATTATGCTTGAAGGAAATG+AGG + Chr4:1015065-1015084 MsG0480018159.01.T01:intron 30.0%
AATTTCATTACGAAGAAGTC+TGG - Chr4:1019723-1019742 None:intergenic 30.0%
ACAAAAGGAGACAATATACA+CGG + Chr4:1019168-1019187 MsG0480018159.01.T01:intron 30.0%
ACACTTAAGTTACAACCTAA+AGG - Chr4:1017174-1017193 None:intergenic 30.0%
ACATCTTGTGTAAAAAACAG+GGG + Chr4:1020921-1020940 MsG0480018159.01.T01:intron 30.0%
ACGTCTATAACAAAAGATGA+AGG - Chr4:1020331-1020350 None:intergenic 30.0%
ACTCAAGCTTTCATATGATT+TGG + Chr4:1015455-1015474 MsG0480018159.01.T01:intron 30.0%
AGTAAACAATGCATTATGTG+AGG - Chr4:1014468-1014487 None:intergenic 30.0%
AGTTATGAAACCCGATATTT+AGG - Chr4:1021441-1021460 None:intergenic 30.0%
AGTTTCTTCCTAATAATCAG+GGG + Chr4:1021688-1021707 MsG0480018159.01.T01:intron 30.0%
ATGACAGTTATATGAAGGAT+TGG + Chr4:1014714-1014733 MsG0480018159.01.T01:intron 30.0%
ATGCGCTATTTAGTACAAAA+TGG + Chr4:1022812-1022831 MsG0480018159.01.T01:intron 30.0%
ATTCAAACAGAGTCTTAAAG+TGG + Chr4:1020823-1020842 MsG0480018159.01.T01:intron 30.0%
ATTCAGATGAAGACAATGTT+AGG - Chr4:1020377-1020396 None:intergenic 30.0%
ATTCCTATTTGTTCATGCAT+TGG + Chr4:1014909-1014928 MsG0480018159.01.T01:intron 30.0%
CAACAACAACAACAATAACA+AGG + Chr4:1016502-1016521 MsG0480018159.01.T01:CDS 30.0%
CAACATCTTGTGTAAAAAAC+AGG + Chr4:1020919-1020938 MsG0480018159.01.T01:intron 30.0%
CACTTAAGTTACAACCTAAA+GGG - Chr4:1017173-1017192 None:intergenic 30.0%
CCTAGCCTATTTAAGTAAAT+AGG - Chr4:1015329-1015348 None:intergenic 30.0%
CCTATTTACTTAAATAGGCT+AGG + Chr4:1015326-1015345 MsG0480018159.01.T01:intron 30.0%
CGTCTATAACAAAAGATGAA+GGG - Chr4:1020330-1020349 None:intergenic 30.0%
CTAAGACTCTGTTTGAATAA+AGG - Chr4:1020986-1021005 None:intergenic 30.0%
CTGAAGATTTCTAAATCTGA+AGG + Chr4:1019033-1019052 MsG0480018159.01.T01:intron 30.0%
CTGGTACTTTGTGAATAAAA+GGG + Chr4:1017544-1017563 MsG0480018159.01.T01:intron 30.0%
CTTAATTGTCAATATCTCCA+AGG + Chr4:1022537-1022556 MsG0480018159.01.T01:CDS 30.0%
CTTAATTGTGTAAACTGTTG+TGG + Chr4:1021805-1021824 MsG0480018159.01.T01:intron 30.0%
CTTCTTCCTAAAATGTGTTT+AGG + Chr4:1021035-1021054 MsG0480018159.01.T01:intron 30.0%
CTTGGAGATATTGACAATTA+AGG - Chr4:1022539-1022558 None:intergenic 30.0%
CTTTGTTCTTGTTAGAATCA+TGG + Chr4:1019853-1019872 MsG0480018159.01.T01:intron 30.0%
GGGTAAGAAAAAAGTTAAGT+GGG + Chr4:1018746-1018765 MsG0480018159.01.T01:intron 30.0%
GTAGTTTCTTCCTAATAATC+AGG + Chr4:1021686-1021705 MsG0480018159.01.T01:intron 30.0%
TAAAACATCTCTTCATGTGT+AGG - Chr4:1018954-1018973 None:intergenic 30.0%
TAAATCCAAAATTGGAGAGA+TGG + Chr4:1018576-1018595 MsG0480018159.01.T01:intron 30.0%
TACAATCATGTACAAAATGC+AGG + Chr4:1018383-1018402 MsG0480018159.01.T01:intron 30.0%
TATCTAGTGGTATAAGCAAT+TGG - Chr4:1020281-1020300 None:intergenic 30.0%
TCAACATTAGGAGAAATTGT+AGG + Chr4:1014658-1014677 MsG0480018159.01.T01:intron 30.0%
TCGTTATGAAATCAGAAGAA+TGG + Chr4:1016984-1017003 MsG0480018159.01.T01:CDS 30.0%
TCTCAGAAGTTGAAATTGAA+TGG + Chr4:1021567-1021586 MsG0480018159.01.T01:intron 30.0%
TGACAGTTATATGAAGGATT+GGG + Chr4:1014715-1014734 MsG0480018159.01.T01:intron 30.0%
TGATTGTAAGCAAACAAGTA+GGG - Chr4:1022708-1022727 None:intergenic 30.0%
TGGCCTACTTCAAAAATTAT+AGG - Chr4:1015720-1015739 None:intergenic 30.0%
TGGGTAAGAAAAAAGTTAAG+TGG + Chr4:1018745-1018764 MsG0480018159.01.T01:intron 30.0%
TGTCTAATATATGTGTGCAT+GGG + Chr4:1015200-1015219 MsG0480018159.01.T01:intron 30.0%
TGTTAAAAGGCTAAGGAATT+AGG + Chr4:1015795-1015814 MsG0480018159.01.T01:intron 30.0%
TTAAATGGGAAAGCTATCTT+TGG + Chr4:1018323-1018342 MsG0480018159.01.T01:CDS 30.0%
TTACGATTTCTTGGAAGTAA+GGG + Chr4:1022962-1022981 MsG0480018159.01.T01:CDS 30.0%
TTCAAACAGAGTCTTAAAGT+GGG + Chr4:1020824-1020843 MsG0480018159.01.T01:intron 30.0%
TTGTCTAATATATGTGTGCA+TGG + Chr4:1015199-1015218 MsG0480018159.01.T01:intron 30.0%
TTGTTGCATAATGATGTTGT+TGG - Chr4:1016434-1016453 None:intergenic 30.0%
TTTACGATTTCTTGGAAGTA+AGG + Chr4:1022961-1022980 MsG0480018159.01.T01:CDS 30.0%
TTTGTGCATTATAGAAATGC+TGG + Chr4:1017050-1017069 MsG0480018159.01.T01:intron 30.0%
TTTGTTTGGATAAACTGTTG+TGG + Chr4:1021476-1021495 MsG0480018159.01.T01:intron 30.0%
! AATTATTTGTTGCTGCATCA+TGG + Chr4:1017282-1017301 MsG0480018159.01.T01:intron 30.0%
! ATTAGGAGTATAATATGTCC+TGG + Chr4:1017483-1017502 MsG0480018159.01.T01:intron 30.0%
! ATTTGTGTTGTGGTTTTTGA+AGG + Chr4:1016170-1016189 MsG0480018159.01.T01:intron 30.0%
! CCTAGAATCTAAAACAAACT+TGG + Chr4:1022078-1022097 MsG0480018159.01.T01:intron 30.0%
! CTTTTTATCACTATACTGTC+CGG - Chr4:1022601-1022620 None:intergenic 30.0%
! GAGTTTTTACTTTCTTGAAG+GGG + Chr4:1014601-1014620 MsG0480018159.01.T01:intron 30.0%
! TACAAAATGGTGTCAAATAG+AGG + Chr4:1022825-1022844 MsG0480018159.01.T01:intron 30.0%
! TTTAGAATCAGAGACAACAA+GGG - Chr4:1019536-1019555 None:intergenic 30.0%
! TTTGGTTGATTAGGGTTTTT+CGG - Chr4:1019589-1019608 None:intergenic 30.0%
! TTTTAGGCCTTCATAAGTTT+TGG + Chr4:1015554-1015573 MsG0480018159.01.T01:intron 30.0%
! TTTTCAGTTACAACCTTAGA+AGG + Chr4:1014762-1014781 MsG0480018159.01.T01:intron 30.0%
! TTTTCTCCAAATCACTTCAT+AGG + Chr4:1017626-1017645 MsG0480018159.01.T01:intron 30.0%
! TTTTCTTACCCATACAAAGA+GGG - Chr4:1018737-1018756 None:intergenic 30.0%
! TTTTTCTTACCCATACAAAG+AGG - Chr4:1018738-1018757 None:intergenic 30.0%
!! ACCCAAACTTTTTCTTCTTT+GGG - Chr4:1016607-1016626 None:intergenic 30.0%
!! ATAAGTTTTGGCCTATTTAG+TGG + Chr4:1015566-1015585 MsG0480018159.01.T01:intron 30.0%
!! CATTTTGTTTCATGCGATTT+TGG + Chr4:1014194-1014213 MsG0480018159.01.T01:intron 30.0%
!! GAAAAAAGTTAAGTGGGTTA+AGG + Chr4:1018752-1018771 MsG0480018159.01.T01:intron 30.0%
!! GGTTTTTGTTATGGGAAAAT+GGG + Chr4:1019817-1019836 MsG0480018159.01.T01:intron 30.0%
!! TACCCAAACTTTTTCTTCTT+TGG - Chr4:1016608-1016627 None:intergenic 30.0%
!! TCTCTTGTTGTTTGTGTAAT+GGG + Chr4:1019796-1019815 MsG0480018159.01.T01:intron 30.0%
!! TTAGCTTTTTCCTAAAAACC+AGG + Chr4:1020465-1020484 MsG0480018159.01.T01:intron 30.0%
!! TTCTCTTGTTGTTTGTGTAA+TGG + Chr4:1019795-1019814 MsG0480018159.01.T01:intron 30.0%
!!! AGCTTTTTTCAGTTGGATTT+TGG + Chr4:1022281-1022300 MsG0480018159.01.T01:intron 30.0%
!!! AGGCCTATAATTTTTGAAGT+AGG + Chr4:1015714-1015733 MsG0480018159.01.T01:intron 30.0%
!!! ATTCTCTAGCTTTTTTCAGT+TGG + Chr4:1022274-1022293 MsG0480018159.01.T01:intron 30.0%
!!! CAAAAATTTTGGAGCTAGTT+TGG + Chr4:1020499-1020518 MsG0480018159.01.T01:intron 30.0%
!!! CCAAGTTTGTTTTAGATTCT+AGG - Chr4:1022081-1022100 None:intergenic 30.0%
!!! GTGTAATGGGTTTTTGTTAT+GGG + Chr4:1019809-1019828 MsG0480018159.01.T01:intron 30.0%
!!! GTGTCATTTTTATCTCCTAT+CGG - Chr4:1015115-1015134 None:intergenic 30.0%
!!! TATAATTTTTGAAGTAGGCC+AGG + Chr4:1015719-1015738 MsG0480018159.01.T01:intron 30.0%
!!! TGTCATTTTTATCTCCTATC+GGG - Chr4:1015114-1015133 None:intergenic 30.0%
!!! TGTGTAATGGGTTTTTGTTA+TGG + Chr4:1019808-1019827 MsG0480018159.01.T01:intron 30.0%
AAAAAGCCTATTAAGCTCGT+CGG + Chr4:1015361-1015380 MsG0480018159.01.T01:intron 35.0%
AAAAATTATAGGCCTGAGTC+TGG - Chr4:1015709-1015728 None:intergenic 35.0%
AACTTACTCCCTCTTTGTAT+GGG + Chr4:1018726-1018745 MsG0480018159.01.T01:intron 35.0%
AAGGAGAAAACAGAGATCAT+AGG + Chr4:1023032-1023051 MsG0480018159.01.T01:CDS 35.0%
ACACCTATGCATGTGTTAAA+AGG + Chr4:1015782-1015801 MsG0480018159.01.T01:intron 35.0%
ACATTGTAACCAAATACAGG+AGG - Chr4:1016698-1016717 None:intergenic 35.0%
AGAAAACAGAGATCATAGGA+TGG + Chr4:1023036-1023055 MsG0480018159.01.T01:CDS 35.0%
AGAGAAATTCCTTTCTCTGA+AGG + Chr4:1014792-1014811 MsG0480018159.01.T01:intron 35.0%
AGATATGTATTACACCCGAT+AGG + Chr4:1015097-1015116 MsG0480018159.01.T01:intron 35.0%
AGCTAATAGTCGTCAACATT+AGG + Chr4:1014646-1014665 MsG0480018159.01.T01:intron 35.0%
AGGATAATTCTCTCAAGTCA+AGG + Chr4:1017955-1017974 MsG0480018159.01.T01:CDS 35.0%
AGTTACAACCTTAGAAGGTT+TGG + Chr4:1014767-1014786 MsG0480018159.01.T01:intron 35.0%
ATAAGCTAAACTCTCTTGGA+TGG + Chr4:1019944-1019963 MsG0480018159.01.T01:intron 35.0%
ATAAGCTCAAGTTCAATGCT+TGG - Chr4:1016860-1016879 None:intergenic 35.0%
ATAGACACAAATCAGGTAAC+TGG + Chr4:1017840-1017859 MsG0480018159.01.T01:CDS 35.0%
ATCCTGGTAGTTTCTATTAG+AGG + Chr4:1018516-1018535 MsG0480018159.01.T01:intron 35.0%
ATCTCAAGACAACATGATCA+TGG - Chr4:1018431-1018450 None:intergenic 35.0%
ATGATTTGAGAAGAAGGAGA+AGG - Chr4:1019644-1019663 None:intergenic 35.0%
ATGCATGTGTTAAAAGGCTA+AGG + Chr4:1015788-1015807 MsG0480018159.01.T01:intron 35.0%
ATGCCAAAGGTTTCAAACAT+GGG - Chr4:1015944-1015963 None:intergenic 35.0%
CAAAGCCTAAGAAAAGAACT+TGG - Chr4:1018020-1018039 None:intergenic 35.0%
CAAATATGCTATCATACCCA+AGG - Chr4:1016827-1016846 None:intergenic 35.0%
CAGGTTTCATAGCTACAAAA+TGG + Chr4:1021135-1021154 MsG0480018159.01.T01:intron 35.0%
CAGTAACATAGACACAAATC+AGG + Chr4:1017833-1017852 MsG0480018159.01.T01:CDS 35.0%
CATTGTAACCAAATACAGGA+GGG - Chr4:1016697-1016716 None:intergenic 35.0%
CCATTAAAATCGACAAGAGA+AGG + Chr4:1014945-1014964 MsG0480018159.01.T01:intron 35.0%
CCCCAAAGAAGAAAAAGTTT+GGG + Chr4:1016603-1016622 MsG0480018159.01.T01:CDS 35.0%
CGGACAGTATAGTGATAAAA+AGG + Chr4:1022599-1022618 MsG0480018159.01.T01:CDS 35.0%
CTATAAGCCTACCACTAAAT+AGG - Chr4:1015580-1015599 None:intergenic 35.0%
CTGAACTCATGAGATATATG+GGG + Chr4:1017433-1017452 MsG0480018159.01.T01:intron 35.0%
CTGATTGTAAGCAAACAAGT+AGG - Chr4:1022709-1022728 None:intergenic 35.0%
CTTTGCAACTAGTATCGTTT+GGG + Chr4:1022248-1022267 MsG0480018159.01.T01:intron 35.0%
GAAAACAGTGAAAAGGTGAA+TGG - Chr4:1014135-1014154 None:intergenic 35.0%
GAAACTTGAAGAGACTGTAA+AGG + Chr4:1017779-1017798 MsG0480018159.01.T01:CDS 35.0%
GAAATTGTAGGCATACTGTT+AGG + Chr4:1014670-1014689 MsG0480018159.01.T01:intron 35.0%
GAATGGGAATTTGGTTGATT+AGG - Chr4:1019598-1019617 None:intergenic 35.0%
GCTGAACTCATGAGATATAT+GGG + Chr4:1017432-1017451 MsG0480018159.01.T01:intron 35.0%
GCTGGTACTTTGTGAATAAA+AGG + Chr4:1017543-1017562 MsG0480018159.01.T01:intron 35.0%
GGATAGTCTTTACGATTTCT+TGG + Chr4:1022953-1022972 MsG0480018159.01.T01:CDS 35.0%
GTAAAGACAAACAGTGCATT+TGG - Chr4:1022110-1022129 None:intergenic 35.0%
GTTACAACCTTAGAAGGTTT+GGG + Chr4:1014768-1014787 MsG0480018159.01.T01:intron 35.0%
TAATTTGGATGCATCATGGA+TGG + Chr4:1018453-1018472 MsG0480018159.01.T01:intron 35.0%
TACGATTTCTTGGAAGTAAG+GGG + Chr4:1022963-1022982 MsG0480018159.01.T01:CDS 35.0%
TACTCTTTATGGAACCCTTT+AGG + Chr4:1017156-1017175 MsG0480018159.01.T01:intron 35.0%
TACTGCTTCAGCTGTATATT+TGG + Chr4:1016948-1016967 MsG0480018159.01.T01:intron 35.0%
TACTTAAATAGGCTAGGCTA+AGG + Chr4:1015332-1015351 MsG0480018159.01.T01:intron 35.0%
TAGAGTGAAAAGAGGATGTT+TGG + Chr4:1016365-1016384 MsG0480018159.01.T01:exon 35.0%
TAGCTATGAAACCTGATTGT+AGG - Chr4:1021130-1021149 None:intergenic 35.0%
TATCTACCAACATAAGCACT+TGG - Chr4:1020698-1020717 None:intergenic 35.0%
TATGCCAAAGGTTTCAAACA+TGG - Chr4:1015945-1015964 None:intergenic 35.0%
TCTTTGCAACTAGTATCGTT+TGG + Chr4:1022247-1022266 MsG0480018159.01.T01:intron 35.0%
TGAAATCAGAAGAATGGAAG+CGG + Chr4:1016990-1017009 MsG0480018159.01.T01:CDS 35.0%
TGCTGAACTCATGAGATATA+TGG + Chr4:1017431-1017450 MsG0480018159.01.T01:intron 35.0%
TTAAGTAACCCTCCTGTATT+TGG + Chr4:1016686-1016705 MsG0480018159.01.T01:intron 35.0%
TTAGTTGGTTATCGTGTTAC+TGG + Chr4:1018797-1018816 MsG0480018159.01.T01:intron 35.0%
TTATCAAGGTAGAAAGGGTA+AGG + Chr4:1021603-1021622 MsG0480018159.01.T01:intron 35.0%
TTATCAGAAGCTGTAGTACA+GGG + Chr4:1018177-1018196 MsG0480018159.01.T01:intron 35.0%
TTGCATAAGCTAAACTCTCT+TGG + Chr4:1019940-1019959 MsG0480018159.01.T01:intron 35.0%
TTGTACTAAATAGCGCATCA+CGG - Chr4:1022810-1022829 None:intergenic 35.0%
TTTATCAGAAGCTGTAGTAC+AGG + Chr4:1018176-1018195 MsG0480018159.01.T01:intron 35.0%
TTTGATGTAAGCACATGTGT+TGG + Chr4:1014378-1014397 MsG0480018159.01.T01:intron 35.0%
TTTGCAACTAGTATCGTTTG+GGG + Chr4:1022249-1022268 MsG0480018159.01.T01:intron 35.0%
! ACCCTTTTATTAAACGAGCT+GGG - Chr4:1015284-1015303 None:intergenic 35.0%
! AGACAATATACACGGTGTTA+AGG + Chr4:1019176-1019195 MsG0480018159.01.T01:intron 35.0%
! AGGCTTTTAAATAGGCTTTC+AGG + Chr4:1015625-1015644 MsG0480018159.01.T01:intron 35.0%
! ATAAGCACTTGGAGACTTTT+TGG - Chr4:1020687-1020706 None:intergenic 35.0%
! CAACTCCAAGTTCTTTTCTT+AGG + Chr4:1018012-1018031 MsG0480018159.01.T01:CDS 35.0%
! CATAGTCGTTGTTGTTGAAT+GGG - Chr4:1019614-1019633 None:intergenic 35.0%
! CATTGACACCGGTAATATTT+TGG + Chr4:1014341-1014360 MsG0480018159.01.T01:intron 35.0%
! CGTATAGCTTTTAGCACAAT+GGG - Chr4:1014573-1014592 None:intergenic 35.0%
! CGTCGTAGCTACAAAAATTT+TGG + Chr4:1020488-1020507 MsG0480018159.01.T01:intron 35.0%
! CTAGTTTGTGTAAACTGTTG+TGG + Chr4:1021734-1021753 MsG0480018159.01.T01:intron 35.0%
! CTGATTTGTGTCTATGTTAC+TGG - Chr4:1017835-1017854 None:intergenic 35.0%
! GAAGCTCCTAAACACATTTT+AGG - Chr4:1021044-1021063 None:intergenic 35.0%
! GTTGTTGTTGAATGGGAATT+TGG - Chr4:1019607-1019626 None:intergenic 35.0%
! GTTTAGAATCAGAGACAACA+AGG - Chr4:1019537-1019556 None:intergenic 35.0%
! TACAAAATGGTTAGCTAGTG+CGG + Chr4:1021148-1021167 MsG0480018159.01.T01:intron 35.0%
! TAGCCTTTTAACACATGCAT+AGG - Chr4:1015788-1015807 None:intergenic 35.0%
! TTCTTCCATCTCTCCAATTT+TGG - Chr4:1018584-1018603 None:intergenic 35.0%
! TTTAGCTTCTTCCTACAATC+AGG + Chr4:1021116-1021135 MsG0480018159.01.T01:intron 35.0%
! TTTTAACACATGCATAGGTG+TGG - Chr4:1015783-1015802 None:intergenic 35.0%
!! ACTTGGTGCAGACAAATTTA+TGG - Chr4:1017880-1017899 None:intergenic 35.0%
!! ATCAGTGAAAAGCATCTTGA+GGG - Chr4:1016582-1016601 None:intergenic 35.0%
!! CCAAACTTTTTCTTCTTTGG+GGG - Chr4:1016605-1016624 None:intergenic 35.0%
!! CCCAAACTTTTTCTTCTTTG+GGG - Chr4:1016606-1016625 None:intergenic 35.0%
!! GGGTTTTTGTTATGGGAAAA+TGG + Chr4:1019816-1019835 MsG0480018159.01.T01:intron 35.0%
!! TTACACAAGATGTTGTTTCC+AGG - Chr4:1020914-1020933 None:intergenic 35.0%
!!! CCTTCTCTTGTCGATTTTAA+TGG - Chr4:1014948-1014967 None:intergenic 35.0%
!!! TGTGTTTTGACTGAAAATCC+TGG + Chr4:1018500-1018519 MsG0480018159.01.T01:intron 35.0%
AAAAGCCTATTAAGCTCGTC+GGG + Chr4:1015362-1015381 MsG0480018159.01.T01:intron 40.0%
AAAGGCAAAATCAACCCCAA+AGG - Chr4:1017596-1017615 None:intergenic 40.0%
AACACAACCAACCCTTTCAT+AGG - Chr4:1018486-1018505 None:intergenic 40.0%
AACAGAGATCATAGGATGGA+TGG + Chr4:1023040-1023059 MsG0480018159.01.T01:CDS 40.0%
AAGTCTCCAAGTGCTTATGT+TGG + Chr4:1020689-1020708 MsG0480018159.01.T01:intron 40.0%
AATACACCAATTAGTGCACC+GGG + Chr4:1020956-1020975 MsG0480018159.01.T01:intron 40.0%
AATCACTTCATAGGAAGTGG+AGG + Chr4:1017635-1017654 MsG0480018159.01.T01:intron 40.0%
AATGAACCGAACTTGTCAGT+AGG - Chr4:1022358-1022377 None:intergenic 40.0%
ACACAACCAACCCTTTCATA+GGG - Chr4:1018485-1018504 None:intergenic 40.0%
ACACCACCAAATGAAGAAGA+AGG - Chr4:1014100-1014119 None:intergenic 40.0%
ACATGCATAGGTGTGGAAAT+GGG - Chr4:1015776-1015795 None:intergenic 40.0%
AGAAATGCTGGTAAGATGCA+TGG + Chr4:1017062-1017081 MsG0480018159.01.T01:intron 40.0%
AGAGTCTTAAAGTGGGAAGT+GGG + Chr4:1020831-1020850 MsG0480018159.01.T01:intron 40.0%
ATATATGTGTGCATGGGAAC+AGG + Chr4:1015206-1015225 MsG0480018159.01.T01:intron 40.0%
ATCAGCTCAGTCAAAACAGT+GGG - Chr4:1016285-1016304 None:intergenic 40.0%
ATGAAAAAGGACGTTGCAGT+AGG - Chr4:1014850-1014869 None:intergenic 40.0%
ATGCTCAAATCAATCGGAGA+AGG + Chr4:1014976-1014995 MsG0480018159.01.T01:intron 40.0%
ATTGGACCCCTGAATTGATA+TGG - Chr4:1017130-1017149 None:intergenic 40.0%
CAACTTACTCCCTCTTTGTA+TGG + Chr4:1018725-1018744 MsG0480018159.01.T01:intron 40.0%
CAAGAGCTTCTTAAGATGCT+CGG + Chr4:1018118-1018137 MsG0480018159.01.T01:intron 40.0%
CAATACACCAATTAGTGCAC+CGG + Chr4:1020955-1020974 MsG0480018159.01.T01:intron 40.0%
CATCTCTGTCTTTCTTGATC+AGG + Chr4:1016758-1016777 MsG0480018159.01.T01:intron 40.0%
CCAAATCACTTCATAGGAAG+TGG + Chr4:1017632-1017651 MsG0480018159.01.T01:intron 40.0%
CCACTTCCTATGAAGTGATT+TGG - Chr4:1017635-1017654 None:intergenic 40.0%
CCCCCAAAGAAGAAAAAGTT+TGG + Chr4:1016602-1016621 MsG0480018159.01.T01:CDS 40.0%
CCTAGGCCTTAGTGTAAAAT+AGG + Chr4:1015605-1015624 MsG0480018159.01.T01:intron 40.0%
CCTCGAAAATAAGCCTATGA+CGG + Chr4:1015675-1015694 MsG0480018159.01.T01:intron 40.0%
CTAGTTTGGAAAAACTGAGG+TGG + Chr4:1020513-1020532 MsG0480018159.01.T01:intron 40.0%
CTCGAAAATAAGCCTATGAC+GGG + Chr4:1015676-1015695 MsG0480018159.01.T01:intron 40.0%
CTGGAGATGATTTGAGAAGA+AGG - Chr4:1019650-1019669 None:intergenic 40.0%
CTTGTGTAAAAAACAGGGGA+AGG + Chr4:1020925-1020944 MsG0480018159.01.T01:intron 40.0%
CTTTAAATAGGCTAGGCCAT+AGG - Chr4:1015251-1015270 None:intergenic 40.0%
GAAAGCTTCTTTGCGCATTT+GGG - Chr4:1019687-1019706 None:intergenic 40.0%
GAAATGCTGGTAAGATGCAT+GGG + Chr4:1017063-1017082 MsG0480018159.01.T01:intron 40.0%
GAAGGAAGAAGAAGAAGCAA+AGG + Chr4:1017671-1017690 MsG0480018159.01.T01:CDS 40.0%
GCATCAGTACATGAAACACA+AGG + Chr4:1023013-1023032 MsG0480018159.01.T01:CDS 40.0%
GCCCAGCTCGTTTAATAAAA+GGG + Chr4:1015280-1015299 MsG0480018159.01.T01:intron 40.0%
GCTCCAATGCATGAACAAAT+AGG - Chr4:1014915-1014934 None:intergenic 40.0%
GCTCGTTTAATAAAAGGGTC+AGG + Chr4:1015285-1015304 MsG0480018159.01.T01:intron 40.0%
GCTTGAAGGAAATGAGGTTT+AGG + Chr4:1015071-1015090 MsG0480018159.01.T01:intron 40.0%
GGAAAAAAGGGAAGAGTAAG+TGG + Chr4:1018076-1018095 MsG0480018159.01.T01:intron 40.0%
GGAGGGTTACTTAATCATGA+AGG - Chr4:1016680-1016699 None:intergenic 40.0%
GGTAAGATGCATGGGATAAT+TGG + Chr4:1017071-1017090 MsG0480018159.01.T01:intron 40.0%
GTAGGCTTATAGATGTTCCT+AGG + Chr4:1015588-1015607 MsG0480018159.01.T01:intron 40.0%
GTTCTTTGCCGAAGTACAAA+AGG - Chr4:1016474-1016493 None:intergenic 40.0%
TATGCTATCATACCCAAGGA+AGG - Chr4:1016823-1016842 None:intergenic 40.0%
TCTGATTCTAAACCCTCCAA+TGG + Chr4:1019544-1019563 MsG0480018159.01.T01:intron 40.0%
TGAAAAAGGACGTTGCAGTA+GGG - Chr4:1014849-1014868 None:intergenic 40.0%
TGAAGAAAGTAAGGGTTCAG+TGG + Chr4:1017989-1018008 MsG0480018159.01.T01:CDS 40.0%
TGACAAGTTCGGTTCATTTG+TGG + Chr4:1022360-1022379 MsG0480018159.01.T01:CDS 40.0%
TGCCTCTAATAGAAACTACC+AGG - Chr4:1018521-1018540 None:intergenic 40.0%
TGCTCAAATCAATCGGAGAA+GGG + Chr4:1014977-1014996 MsG0480018159.01.T01:intron 40.0%
TGCTTCAGCTGTATATTTGG+TGG + Chr4:1016951-1016970 MsG0480018159.01.T01:intron 40.0%
TTACTTTCTTGAAGGGGTCA+TGG + Chr4:1014607-1014626 MsG0480018159.01.T01:intron 40.0%
TTCACTTTGCTTCTTTCCCA+TGG + Chr4:1018542-1018561 MsG0480018159.01.T01:intron 40.0%
TTCATGCATTGGAGCAACTA+TGG + Chr4:1014920-1014939 MsG0480018159.01.T01:intron 40.0%
TTCCTAATAATCAGGGGTCA+TGG + Chr4:1021694-1021713 MsG0480018159.01.T01:intron 40.0%
TTGGGAGATGTAAGTTCTTC+TGG - Chr4:1019669-1019688 None:intergenic 40.0%
TTTACAACCAGTGTCTAGCT+AGG - Chr4:1017245-1017264 None:intergenic 40.0%
! AGCCTATTTAAAGCCTAGCT+CGG + Chr4:1015258-1015277 MsG0480018159.01.T01:intron 40.0%
! AGGTTTATCCTTTTCCTCAG+GGG - Chr4:1017724-1017743 None:intergenic 40.0%
! CAGGTTTATCCTTTTCCTCA+GGG - Chr4:1017725-1017744 None:intergenic 40.0%
! CAGTGCTACTACATTGACAA+AGG + Chr4:1014430-1014449 MsG0480018159.01.T01:intron 40.0%
! CCTATTTTACACTAAGGCCT+AGG - Chr4:1015608-1015627 None:intergenic 40.0%
! CTTGTTGTCACATGACTGAA+AGG + Chr4:1020874-1020893 MsG0480018159.01.T01:intron 40.0%
! GACCCTTTTATTAAACGAGC+TGG - Chr4:1015285-1015304 None:intergenic 40.0%
! GAGCTAGTTTGGAAAAACTG+AGG + Chr4:1020510-1020529 MsG0480018159.01.T01:intron 40.0%
! GCATAGTCGTTGTTGTTGAA+TGG - Chr4:1019615-1019634 None:intergenic 40.0%
! GCGTATAGCTTTTAGCACAA+TGG - Chr4:1014574-1014593 None:intergenic 40.0%
! GCTTCATCAGGCCTTTAAAA+AGG + Chr4:1015647-1015666 MsG0480018159.01.T01:intron 40.0%
! GTTGATTCTTTACAGGGAAC+TGG + Chr4:1022917-1022936 MsG0480018159.01.T01:intron 40.0%
! TATTTGTTGCTGCATCATGG+TGG + Chr4:1017285-1017304 MsG0480018159.01.T01:intron 40.0%
! TCAGAGACAACAAGGGTTTT+AGG - Chr4:1019529-1019548 None:intergenic 40.0%
! TCAGGTTTATCCTTTTCCTC+AGG - Chr4:1017726-1017745 None:intergenic 40.0%
! TCTTTTTCCTAGCTAGACAC+TGG + Chr4:1017235-1017254 MsG0480018159.01.T01:intron 40.0%
! TTGCTGAAACTGTTTCTTGC+TGG + Chr4:1017525-1017544 MsG0480018159.01.T01:intron 40.0%
!! AAAGGAGGGCTTTGGAAAAA+AGG + Chr4:1018063-1018082 MsG0480018159.01.T01:CDS 40.0%
!! AAGGAGGGCTTTGGAAAAAA+GGG + Chr4:1018064-1018083 MsG0480018159.01.T01:CDS 40.0%
!! AAGTACAAAAGGCACTTCTC+TGG - Chr4:1016463-1016482 None:intergenic 40.0%
!! AGCTAGGCTTTAAATAGGCT+AGG - Chr4:1015258-1015277 None:intergenic 40.0%
!! AGTACAAAAGGCACTTCTCT+GGG - Chr4:1016462-1016481 None:intergenic 40.0%
!! ATAAGCCTATGACGGGTAAT+AGG + Chr4:1015683-1015702 MsG0480018159.01.T01:intron 40.0%
!! GATCAGTGAAAAGCATCTTG+AGG - Chr4:1016583-1016602 None:intergenic 40.0%
!! GTTTTGGCCTATTTAGTGGT+AGG + Chr4:1015570-1015589 MsG0480018159.01.T01:intron 40.0%
!! TGTTGTGGTTTTTGAAGGTG+TGG + Chr4:1016175-1016194 MsG0480018159.01.T01:intron 40.0%
!! TTAGGCTTTGTTTGCGTGTT+TGG + Chr4:1018030-1018049 MsG0480018159.01.T01:CDS 40.0%
!! TTAGGGTTTTTCGGAGAGAA+CGG - Chr4:1019580-1019599 None:intergenic 40.0%
!!! CATCTGCTTTTTGTTCAGCT+TGG + Chr4:1016090-1016109 MsG0480018159.01.T01:intron 40.0%
!!! GAGAAGTGCCTTTTGTACTT+CGG + Chr4:1016463-1016482 MsG0480018159.01.T01:CDS 40.0%
!!! GGGACTTTTAGAGTGAAAAG+AGG + Chr4:1016357-1016376 MsG0480018159.01.T01:five_prime_UTR 40.0%
!!! GTTTTGACTGAGCTGATGAT+TGG + Chr4:1016288-1016307 MsG0480018159.01.T01:intron 40.0%
AACACTGCTCCTTCAGAGAA+AGG - Chr4:1014804-1014823 None:intergenic 45.0%
AACAGCTCCATCAAACATGG+TGG - Chr4:1022458-1022477 None:intergenic 45.0%
AAGGATTGGGATAGTGAGAG+AGG + Chr4:1014728-1014747 MsG0480018159.01.T01:intron 45.0%
AATCTTCCCCTACGTCAAAG+CGG - Chr4:1018277-1018296 None:intergenic 45.0%
AATGTAATCCATCGCTCACC+GGG - Chr4:1022397-1022416 None:intergenic 45.0%
ACAACCAACCCTTTCATAGG+GGG - Chr4:1018483-1018502 None:intergenic 45.0%
ACAGTGGGTCGGTAAATCAT+TGG - Chr4:1016270-1016289 None:intergenic 45.0%
ACTAAATCCCCCTGAGGAAA+AGG + Chr4:1017713-1017732 MsG0480018159.01.T01:CDS 45.0%
ACTGAGCTGATGATTGGTAC+AGG + Chr4:1016294-1016313 MsG0480018159.01.T01:intron 45.0%
AGCCATGACCCCTGATTATT+AGG - Chr4:1021699-1021718 None:intergenic 45.0%
AGGAACAGCTCCATCAAACA+TGG - Chr4:1022461-1022480 None:intergenic 45.0%
AGGTCGTCATCACTGATGAA+AGG + Chr4:1016522-1016541 MsG0480018159.01.T01:CDS 45.0%
ATAGGCTTTCAGGCTTCATC+AGG + Chr4:1015635-1015654 MsG0480018159.01.T01:intron 45.0%
ATGCGCAAAGAAGCTTTCGA+AGG + Chr4:1019689-1019708 MsG0480018159.01.T01:intron 45.0%
ATTGGAACTAAATCCCCCTG+AGG + Chr4:1017707-1017726 MsG0480018159.01.T01:CDS 45.0%
CAAGTTCGGTTCATTTGTGG+TGG + Chr4:1022363-1022382 MsG0480018159.01.T01:CDS 45.0%
CAATGTAATCCATCGCTCAC+CGG - Chr4:1022398-1022417 None:intergenic 45.0%
CACAACCAACCCTTTCATAG+GGG - Chr4:1018484-1018503 None:intergenic 45.0%
CACATGCATAGGTGTGGAAA+TGG - Chr4:1015777-1015796 None:intergenic 45.0%
CAGAGTCTTAAAGTGGGAAG+TGG + Chr4:1020830-1020849 MsG0480018159.01.T01:intron 45.0%
CATAGGAAGTGGAGGAGAAA+AGG + Chr4:1017643-1017662 MsG0480018159.01.T01:intron 45.0%
CATCAGCTCAGTCAAAACAG+TGG - Chr4:1016286-1016305 None:intergenic 45.0%
CCACCAAATGAAGAAGAAGG+AGG - Chr4:1014097-1014116 None:intergenic 45.0%
CCTCCTTCTTCTTCATTTGG+TGG + Chr4:1014094-1014113 MsG0480018159.01.T01:five_prime_UTR 45.0%
CGAAAGCTTCTTTGCGCATT+TGG - Chr4:1019688-1019707 None:intergenic 45.0%
CTCTTTCATCTCTGACAGCT+GGG - Chr4:1017751-1017770 None:intergenic 45.0%
GAAAAGAGGATGTTTGGCAG+CGG + Chr4:1016371-1016390 MsG0480018159.01.T01:exon 45.0%
GACAGGTTCAGTATCCTGTA+AGG - Chr4:1018251-1018270 None:intergenic 45.0%
GATCATAGGATGGATGGAGA+AGG + Chr4:1023046-1023065 MsG0480018159.01.T01:CDS 45.0%
GGCCCAGCTCGTTTAATAAA+AGG + Chr4:1015279-1015298 MsG0480018159.01.T01:intron 45.0%
GGGGCATGACAGTTATATGA+AGG + Chr4:1014709-1014728 MsG0480018159.01.T01:intron 45.0%
GTAGGCATACTGTTAGGTAC+CGG + Chr4:1014676-1014695 MsG0480018159.01.T01:intron 45.0%
GTCAATATCTCCAAGGGAGA+TGG + Chr4:1022544-1022563 MsG0480018159.01.T01:CDS 45.0%
GTCAGTGTCAATGTCGTGTT+TGG - Chr4:1014320-1014339 None:intergenic 45.0%
GTTCCTGCTCCGAAAAAAAG+CGG + Chr4:1022475-1022494 MsG0480018159.01.T01:CDS 45.0%
GTTGAAGCCACCATGTTTGA+TGG + Chr4:1022448-1022467 MsG0480018159.01.T01:CDS 45.0%
TACAGGATTGGAAGGAGAAG+AGG - Chr4:1019762-1019781 None:intergenic 45.0%
TAGGCATACTGTTAGGTACC+GGG + Chr4:1014677-1014696 MsG0480018159.01.T01:intron 45.0%
TCAAAGTCAGGACCAGCATA+GGG - Chr4:1022661-1022680 None:intergenic 45.0%
TCGCCTCCTTCTTCTTCATT+TGG + Chr4:1014091-1014110 MsG0480018159.01.T01:five_prime_UTR 45.0%
TCTCTTTCATCTCTGACAGC+TGG - Chr4:1017752-1017771 None:intergenic 45.0%
TCTTTCATCTCTGACAGCTG+GGG - Chr4:1017750-1017769 None:intergenic 45.0%
TGGAAATCATGTGCTCTGCT+TGG + Chr4:1022575-1022594 MsG0480018159.01.T01:CDS 45.0%
TGTTTGAATAAAGGGCAGCC+CGG - Chr4:1020977-1020996 None:intergenic 45.0%
TTCTCTGCCCAAACCTTCTA+AGG - Chr4:1014778-1014797 None:intergenic 45.0%
TTGCAGCCTACTGACAAGTT+CGG + Chr4:1022349-1022368 MsG0480018159.01.T01:intron 45.0%
! ATCAGGCCTTTAAAAAGGCC+AGG + Chr4:1015652-1015671 MsG0480018159.01.T01:intron 45.0%
! ATTTTTGTAGCTACGACGCC+TGG - Chr4:1020486-1020505 None:intergenic 45.0%
! CTTTGTTTGCGTGTTTGGAG+GGG + Chr4:1018035-1018054 MsG0480018159.01.T01:CDS 45.0%
! GGTTTATCCTTTTCCTCAGG+GGG - Chr4:1017723-1017742 None:intergenic 45.0%
! GTGCCCATGTTTGAAACCTT+TGG + Chr4:1015938-1015957 MsG0480018159.01.T01:intron 45.0%
! TTCGGTTCATTTGTGGTGGA+TGG + Chr4:1022367-1022386 MsG0480018159.01.T01:CDS 45.0%
!! AGTGAAAAGCATCTTGAGGG+CGG - Chr4:1016579-1016598 None:intergenic 45.0%
!! ATAGGCTTATTTTCGAGGCC+TGG - Chr4:1015673-1015692 None:intergenic 45.0%
!! CCGTCATAGGCTTATTTTCG+AGG - Chr4:1015678-1015697 None:intergenic 45.0%
!! CGAACAAGACAGTGTTGGTA+AGG + Chr4:1017935-1017954 MsG0480018159.01.T01:CDS 45.0%
!! GCTTTGTTTGCGTGTTTGGA+GGG + Chr4:1018034-1018053 MsG0480018159.01.T01:CDS 45.0%
!! TAGGTACCGGGTTTGTTAGA+GGG + Chr4:1014689-1014708 MsG0480018159.01.T01:intron 45.0%
!! TTAGGTACCGGGTTTGTTAG+AGG + Chr4:1014688-1014707 MsG0480018159.01.T01:intron 45.0%
!!! TTTTGAAGTAGGCCAGGCTT+AGG + Chr4:1015725-1015744 MsG0480018159.01.T01:intron 45.0%
!!! TAAAATTTTGATAAATAAAT+TGG - Chr4:1019397-1019416 None:intergenic 5.0%
AAAGGACGTTGCAGTAGGGA+AGG - Chr4:1014845-1014864 None:intergenic 50.0%
AAAGTGGGAAGTGGGAACCT+TGG + Chr4:1020839-1020858 MsG0480018159.01.T01:intron 50.0%
AATCATGTGCTCTGCTTGGC+CGG + Chr4:1022579-1022598 MsG0480018159.01.T01:CDS 50.0%
ACAAGTTTACCGTTGCGCCA+AGG - Chr4:1020859-1020878 None:intergenic 50.0%
AGCAGTGTTGTGGGTAGTTG+GGG + Chr4:1014815-1014834 MsG0480018159.01.T01:intron 50.0%
ATCTTCCCCTACGTCAAAGC+GGG - Chr4:1018276-1018295 None:intergenic 50.0%
ATGGCATCCCCCCTATGAAA+GGG + Chr4:1018472-1018491 MsG0480018159.01.T01:intron 50.0%
CAACCAACCCTTTCATAGGG+GGG - Chr4:1018482-1018501 None:intergenic 50.0%
CACATGACTGAAAGGTCACG+AGG + Chr4:1020882-1020901 MsG0480018159.01.T01:intron 50.0%
CCAGTCGAACAAGACAGTGT+TGG + Chr4:1017930-1017949 MsG0480018159.01.T01:CDS 50.0%
CTCAAAGTCAGGACCAGCAT+AGG - Chr4:1022662-1022681 None:intergenic 50.0%
CTGTAGTACAGGGCTCTCAT+TGG + Chr4:1018187-1018206 MsG0480018159.01.T01:intron 50.0%
GAACGGAACAAACGTGCCAT+TGG - Chr4:1019563-1019582 None:intergenic 50.0%
GAGCAGTGTTGTGGGTAGTT+GGG + Chr4:1014814-1014833 MsG0480018159.01.T01:intron 50.0%
GCTCAGTCAAAACAGTGGGT+CGG - Chr4:1016281-1016300 None:intergenic 50.0%
GGAACTGGATGATGAGTTGC+AGG + Chr4:1022932-1022951 MsG0480018159.01.T01:CDS 50.0%
GGAGGAGAAAAGGAAGCAGA+AGG + Chr4:1017653-1017672 MsG0480018159.01.T01:CDS 50.0%
TCATGCCCCTCTAACAAACC+CGG - Chr4:1014698-1014717 None:intergenic 50.0%
TCCGAAAAAAAGCGGTGGTG+TGG + Chr4:1022483-1022502 MsG0480018159.01.T01:CDS 50.0%
TCTGCACCAAGTAACACGAG+TGG + Chr4:1017888-1017907 MsG0480018159.01.T01:CDS 50.0%
TCTGGCCTATTACCCGTCAT+AGG - Chr4:1015691-1015710 None:intergenic 50.0%
TGGCTCTTACGTCATTGCCA+TGG + Chr4:1016110-1016129 MsG0480018159.01.T01:intron 50.0%
TTTGCCTGCATGCCTTCCTT+GGG + Chr4:1016808-1016827 MsG0480018159.01.T01:CDS 50.0%
TTTGCGTGTTTGGAGGGGAA+GGG + Chr4:1018040-1018059 MsG0480018159.01.T01:CDS 50.0%
! CATAGGTGTGGAAATGGGCT+AGG - Chr4:1015771-1015790 None:intergenic 50.0%
! CCAACACTGTCTTGTTCGAC+TGG - Chr4:1017933-1017952 None:intergenic 50.0%
! CTCTGAAGGAGCAGTGTTGT+GGG + Chr4:1014806-1014825 MsG0480018159.01.T01:intron 50.0%
! GAACTGCCACTCGTGTTACT+TGG - Chr4:1017897-1017916 None:intergenic 50.0%
! GGAACAAACGTGCCATTGGA+GGG - Chr4:1019559-1019578 None:intergenic 50.0%
! TCTCTGAAGGAGCAGTGTTG+TGG + Chr4:1014805-1014824 MsG0480018159.01.T01:intron 50.0%
! TGACACTGACGCATTGACAC+CGG + Chr4:1014330-1014349 MsG0480018159.01.T01:intron 50.0%
! TTTTGCCTGCATGCCTTCCT+TGG + Chr4:1016807-1016826 MsG0480018159.01.T01:CDS 50.0%
!! AGCTACGACGCCTGGTTTTT+AGG - Chr4:1020478-1020497 None:intergenic 50.0%
!! AGGTACCGGGTTTGTTAGAG+GGG + Chr4:1014690-1014709 MsG0480018159.01.T01:intron 50.0%
!! GGCCGAGCTAGGCTTTAAAT+AGG - Chr4:1015263-1015282 None:intergenic 50.0%
!! GGCTTTGTTTGCGTGTTTGG+AGG + Chr4:1018033-1018052 MsG0480018159.01.T01:CDS 50.0%
!! TCGAGGCCTGGCCTTTTTAA+AGG - Chr4:1015661-1015680 None:intergenic 50.0%
!!! GCCACACCACCGCTTTTTTT+CGG - Chr4:1022487-1022506 None:intergenic 50.0%
AAGGTCACGAGGTCAAGTCC+TGG + Chr4:1020893-1020912 MsG0480018159.01.T01:intron 55.0%
AAGTGGGAACCTTGGCGCAA+CGG + Chr4:1020847-1020866 MsG0480018159.01.T01:intron 55.0%
ACGGGTAATAGGCCAGACTC+AGG + Chr4:1015694-1015713 MsG0480018159.01.T01:intron 55.0%
AGAGGATGTTTGGCAGCGGA+AGG + Chr4:1016375-1016394 MsG0480018159.01.T01:exon 55.0%
ATCTCTGACAGCTGGGGATC+AGG - Chr4:1017744-1017763 None:intergenic 55.0%
ATGACAGCTGAGCCCTATGC+TGG + Chr4:1022646-1022665 MsG0480018159.01.T01:CDS 55.0%
CAAGGGAGATGGTCATGTGC+TGG + Chr4:1022555-1022574 MsG0480018159.01.T01:CDS 55.0%
CAGCACATGACCATCTCCCT+TGG - Chr4:1022557-1022576 None:intergenic 55.0%
CATCCCCCCTATGAAAGGGT+TGG + Chr4:1018476-1018495 MsG0480018159.01.T01:intron 55.0%
CCTGCTCCGAAAAAAAGCGG+TGG + Chr4:1022478-1022497 MsG0480018159.01.T01:CDS 55.0%
GATGGCATCCCCCCTATGAA+AGG + Chr4:1018471-1018490 MsG0480018159.01.T01:intron 55.0%
GGAGCAGTGTTGTGGGTAGT+TGG + Chr4:1014813-1014832 MsG0480018159.01.T01:intron 55.0%
GGCTTAGGCCTTACAAAGCC+CGG + Chr4:1015740-1015759 MsG0480018159.01.T01:intron 55.0%
GGGGTCATGGCTTGATACTC+TGG + Chr4:1014620-1014639 MsG0480018159.01.T01:intron 55.0%
GTGTTTGGAGGGGAAGGGAA+AGG + Chr4:1018045-1018064 MsG0480018159.01.T01:CDS 55.0%
GTTTGCGTGTTTGGAGGGGA+AGG + Chr4:1018039-1018058 MsG0480018159.01.T01:CDS 55.0%
TAATCCATCGCTCACCGGGT+CGG - Chr4:1022393-1022412 None:intergenic 55.0%
TGTCGTCCCGCTTTGACGTA+GGG + Chr4:1018267-1018286 MsG0480018159.01.T01:CDS 55.0%
TTGGAGGGGAAGGGAAAGGA+GGG + Chr4:1018049-1018068 MsG0480018159.01.T01:CDS 55.0%
TTGGTCGGAGACGGAATGGA+CGG - Chr4:1014061-1014080 None:intergenic 55.0%
TTTGGAGGGGAAGGGAAAGG+AGG + Chr4:1018048-1018067 MsG0480018159.01.T01:CDS 55.0%
! CATACCCAAGGAAGGCATGC+AGG - Chr4:1016815-1016834 None:intergenic 55.0%
! CGGAACAAACGTGCCATTGG+AGG - Chr4:1019560-1019579 None:intergenic 55.0%
! GGCTTTGTAAGGCCTAAGCC+TGG - Chr4:1015740-1015759 None:intergenic 55.0%
!!! CCACCGCTTTTTTTCGGAGC+AGG - Chr4:1022481-1022500 None:intergenic 55.0%
AGCAGCAGCTTGGTCGGAGA+CGG - Chr4:1014070-1014089 None:intergenic 60.0%
AGGCCTTACAAAGCCCGGCT+CGG + Chr4:1015745-1015764 MsG0480018159.01.T01:intron 60.0%
CAGCTTGGTCGGAGACGGAA+TGG - Chr4:1014065-1014084 None:intergenic 60.0%
CTACGTCAAAGCGGGACGAC+AGG - Chr4:1018268-1018287 None:intergenic 60.0%
CTGTCGTCCCGCTTTGACGT+AGG + Chr4:1018266-1018285 MsG0480018159.01.T01:CDS 60.0%
GCCTATTAAGCTCGTCGGGC+CGG + Chr4:1015366-1015385 MsG0480018159.01.T01:intron 60.0%
GGATGTTTGGCAGCGGAAGG+AGG + Chr4:1016378-1016397 MsG0480018159.01.T01:exon 60.0%
GGGAAGGGAAAGGAGGGCTT+TGG + Chr4:1018055-1018074 MsG0480018159.01.T01:CDS 60.0%
GTCGTCCCGCTTTGACGTAG+GGG + Chr4:1018268-1018287 MsG0480018159.01.T01:CDS 60.0%
TAAACGAGCTGGGCCGAGCT+AGG - Chr4:1015274-1015293 None:intergenic 60.0%
TGTGTGCATGGGAACAGGCC+AGG + Chr4:1015211-1015230 MsG0480018159.01.T01:intron 60.0%
TGTTTGGCAGCGGAAGGAGG+TGG + Chr4:1016381-1016400 MsG0480018159.01.T01:CDS 60.0%
!! TTTGTGGTGGATGGCCGACC+CGG + Chr4:1022376-1022395 MsG0480018159.01.T01:CDS 60.0%
AGGAGGCGACAGCAGCAGCT+TGG - Chr4:1014080-1014099 None:intergenic 65.0%
GCCGGCCCGACGAGCTTAAT+AGG - Chr4:1015370-1015389 None:intergenic 65.0%
GCTAGGCCATAGGCCCCTGT+CGG - Chr4:1015241-1015260 None:intergenic 65.0%
GGCGACAGCAGCAGCTTGGT+CGG - Chr4:1014076-1014095 None:intergenic 65.0%
GGGCAGCCCGGTGCACTAAT+TGG - Chr4:1020965-1020984 None:intergenic 65.0%
! AGGCCGAGCCGGGCTTTGTA+AGG - Chr4:1015751-1015770 None:intergenic 65.0%
! GAATGGACGGCGCCGGAGAT+GGG - Chr4:1014048-1014067 None:intergenic 65.0%
!! GAAATGGGCTAGGCCGAGCC+GGG - Chr4:1015761-1015780 None:intergenic 65.0%
!! GGAAATGGGCTAGGCCGAGC+CGG - Chr4:1015762-1015781 None:intergenic 65.0%
AACAGGCCAGGCCGTCCGAC+AGG + Chr4:1015223-1015242 MsG0480018159.01.T01:intron 70.0%
ACAGGCCAGGCCGTCCGACA+GGG + Chr4:1015224-1015243 MsG0480018159.01.T01:intron 70.0%
ATGGCCGACCCGGTGAGCGA+TGG + Chr4:1022386-1022405 MsG0480018159.01.T01:CDS 70.0%
GGAGACGGAATGGACGGCGC+CGG - Chr4:1014055-1014074 None:intergenic 70.0%
GGCCATAGGCCCCTGTCGGA+CGG - Chr4:1015237-1015256 None:intergenic 70.0%
! GGAATGGACGGCGCCGGAGA+TGG - Chr4:1014049-1014068 None:intergenic 70.0%
CAGGCCAGGCCGTCCGACAG+GGG + Chr4:1015225-1015244 MsG0480018159.01.T01:intron 75.0%
GGCCGTCCGACAGGGGCCTA+TGG + Chr4:1015232-1015251 MsG0480018159.01.T01:intron 75.0%
TAGGCCCCTGTCGGACGGCC+TGG - Chr4:1015232-1015251 None:intergenic 75.0%
TCGCGCCGCCGTCCCATCTC+CGG + Chr4:1014033-1014052 MsG0480018159.01.T01:intron 75.0%
! GGACGGCGCCGGAGATGGGA+CGG - Chr4:1014044-1014063 None:intergenic 75.0%
!! CGGCGCCGGAGATGGGACGG+CGG - Chr4:1014041-1014060 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr4 gene 1013992 1023094 1013992 ID=MsG0480018159.01;Name=MsG0480018159.01
Chr4 mRNA 1013992 1023094 1013992 ID=MsG0480018159.01.T01;Parent=MsG0480018159.01;Name=MsG0480018159.01.T01;_AED=0.41;_eAED=0.41;_QI=168|0.62|0.55|1|0.75|0.66|9|0|458
Chr4 exon 1013992 1014034 1013992 ID=MsG0480018159.01.T01:exon:418;Parent=MsG0480018159.01.T01
Chr4 exon 1014055 1014115 1014055 ID=MsG0480018159.01.T01:exon:419;Parent=MsG0480018159.01.T01
Chr4 exon 1016316 1016624 1016316 ID=MsG0480018159.01.T01:exon:420;Parent=MsG0480018159.01.T01
Chr4 exon 1016780 1016829 1016780 ID=MsG0480018159.01.T01:exon:421;Parent=MsG0480018159.01.T01
Chr4 exon 1016959 1017011 1016959 ID=MsG0480018159.01.T01:exon:422;Parent=MsG0480018159.01.T01
Chr4 exon 1017648 1018090 1017648 ID=MsG0480018159.01.T01:exon:423;Parent=MsG0480018159.01.T01
Chr4 exon 1018256 1018352 1018256 ID=MsG0480018159.01.T01:exon:424;Parent=MsG0480018159.01.T01
Chr4 exon 1022355 1022680 1022355 ID=MsG0480018159.01.T01:exon:425;Parent=MsG0480018159.01.T01
Chr4 exon 1022932 1023094 1022932 ID=MsG0480018159.01.T01:exon:426;Parent=MsG0480018159.01.T01
Chr4 five_prime_UTR 1013992 1014034 1013992 ID=MsG0480018159.01.T01:five_prime_utr;Parent=MsG0480018159.01.T01
Chr4 five_prime_UTR 1014055 1014115 1014055 ID=MsG0480018159.01.T01:five_prime_utr;Parent=MsG0480018159.01.T01
Chr4 five_prime_UTR 1016316 1016379 1016316 ID=MsG0480018159.01.T01:five_prime_utr;Parent=MsG0480018159.01.T01
Chr4 CDS 1016380 1016624 1016380 ID=MsG0480018159.01.T01:cds;Parent=MsG0480018159.01.T01
Chr4 CDS 1016780 1016829 1016780 ID=MsG0480018159.01.T01:cds;Parent=MsG0480018159.01.T01
Chr4 CDS 1016959 1017011 1016959 ID=MsG0480018159.01.T01:cds;Parent=MsG0480018159.01.T01
Chr4 CDS 1017648 1018090 1017648 ID=MsG0480018159.01.T01:cds;Parent=MsG0480018159.01.T01
Chr4 CDS 1018256 1018352 1018256 ID=MsG0480018159.01.T01:cds;Parent=MsG0480018159.01.T01
Chr4 CDS 1022355 1022680 1022355 ID=MsG0480018159.01.T01:cds;Parent=MsG0480018159.01.T01
Chr4 CDS 1022932 1023094 1022932 ID=MsG0480018159.01.T01:cds;Parent=MsG0480018159.01.T01
Gene Sequence

>MsG0480018159.01.T01

ATGTTTGGCAGCGGAAGGAGGTGGTTGCGCTTTGTGCAATTCAAGCTTTATCCAACAACATCATTATGCAACAAATCTGCCCAGAGAAGTGCCTTTTGTACTTCGGCAAAGAACAACAACAACAACAACAACAACAATAACAAGGTCGTCATCACTGATGAAAGGTATCAGCAGCTCGAAAATCTCAACATGATGACCGCCCTCAAGATGCTTTTCACTGATCCCCCAAAGAAGAAAAAGTTTGGGTTTGATTTCCATCTTGTGCAATTTTTTTTTGCCTGCATGCCTTCCTTGGCTGTATATTTGGTGGCTCAGTACGCTCGTTATGAAATCAGAAGAATGGAAGCGGAAGTGGAGGAGAAAAGGAAGCAGAAGGAAGAAGAAGAAGCAAAGGAGAAAGAAAAAGAATTGGAACTAAATCCCCCTGAGGAAAAGGATAAACCTGATCCCCAGCTGTCAGAGATGAAAGAGAGACTTGAGAAACTTGAAGAGACTGTAAAGGAGATTGCTGTTGTAAAAAAGAAACAATCAACCAGTAACATAGACACAAATCAGGTAACTGGTGATGAGAAAAAATCCATAAATTTGTCTGCACCAAGTAACACGAGTGGCAGTTCAGTAACTATTAAACCAGTCGAACAAGACAGTGTTGGTAAGGATAATTCTCTCAAGTCAAGGACAGAATTAGATGAAGAAAGTAAGGGTTCAGTGGCAACTCCAAGTTCTTTTCTTAGGCTTTGTTTGCGTGTTTGGAGGGGAAGGGAAAGGAGGGCTTTGGAAAAAAGGGAAGAGATACTGAACCTGTCGTCCCGCTTTGACGTAGGGGAAGATTTTGAGTTTATTGTAAGGAAGGAAATTTTAAATGGGAAAGCTATCTTTGGTGCATTACCTACTGACAAGTTCGGTTCATTTGTGGTGGATGGCCGACCCGGTGAGCGATGGATTACATTGAAAAGACAATTTGCCAATGAAAACATTAAGGTTGAAGCCACCATGTTTGATGGAGCTGTTCCTGCTCCGAAAAAAAGCGGTGGTGTGGCTAATGCAGATGAAGTGCAGCTACACATTACCTTAATTGTCAATATCTCCAAGGGAGATGGTCATGTGCTGGAAATCATGTGCTCTGCTTGGCCGGACAGTATAGTGATAAAAAGGCTGCTCGTTCGCGAAAACAAAAATATGACAGCTGAGCCCTATGCTGGTCCTGACTTTGAGGAACTGGATGATGAGTTGCAGGATAGTCTTTACGATTTCTTGGAAGTAAGGGGTATAAATGATGAACTTGTCAAATACTTGCATCAGTACATGAAACACAAGGAGAAAACAGAGATCATAGGATGGATGGAGAAGGTTAAATCTTATATCGAGAAGAAGTAA

Protein sequence

>MsG0480018159.01.T01

MFGSGRRWLRFVQFKLYPTTSLCNKSAQRSAFCTSAKNNNNNNNNNNKVVITDERYQQLENLNMMTALKMLFTDPPKKKKFGFDFHLVQFFFACMPSLAVYLVAQYARYEIRRMEAEVEEKRKQKEEEEAKEKEKELELNPPEEKDKPDPQLSEMKERLEKLEETVKEIAVVKKKQSTSNIDTNQVTGDEKKSINLSAPSNTSGSSVTIKPVEQDSVGKDNSLKSRTELDEESKGSVATPSSFLRLCLRVWRGRERRALEKREEILNLSSRFDVGEDFEFIVRKEILNGKAIFGALPTDKFGSFVVDGRPGERWITLKRQFANENIKVEATMFDGAVPAPKKSGGVANADEVQLHITLIVNISKGDGHVLEIMCSAWPDSIVIKRLLVRENKNMTAEPYAGPDFEELDDELQDSLYDFLEVRGINDELVKYLHQYMKHKEKTEIIGWMEKVKSYIEKK*