AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001172.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001172.01.T01 MTR_1g032500 94.867 526 27 0 37 562 9 534 0.0 1050
MsG0180001172.01.T01 MTR_1g032500 94.751 381 20 0 37 417 9 389 0.0 771
MsG0180001172.01.T01 MTR_2g006180 37.123 431 248 9 37 459 28 443 4.82e-88 286
MsG0180001172.01.T01 MTR_1g050492 28.453 362 236 10 48 397 22 372 9.52e-35 140
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001172.01.T01 AT2G01730 71.293 526 133 3 37 562 9 516 0.0 787
MsG0180001172.01.T01 AT2G01730 71.828 465 113 3 98 562 1 447 0.0 694
MsG0180001172.01.T01 AT1G61010 34.809 497 299 10 37 526 28 506 4.03e-92 297
MsG0180001172.01.T01 AT1G61010 34.809 497 299 10 37 526 28 506 4.03e-92 297
MsG0180001172.01.T01 AT1G61010 34.809 497 299 10 37 526 28 506 4.03e-92 297
MsG0180001172.01.T01 AT1G61010 34.809 497 299 10 37 526 28 506 4.03e-92 297
MsG0180001172.01.T01 AT1G61010 34.809 497 299 10 37 526 28 506 4.03e-92 297
MsG0180001172.01.T01 AT5G23880 29.201 363 233 9 48 397 22 373 3.10e-39 153

Find 122 sgRNAs with CRISPR-Local

Find 686 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATAAATTGTTAAGGTTAT+TGG 0.150822 1:-16814484 MsG0180001172.01.T01:intron
TAGGTTCATAAATGTGTTTC+TGG 0.191107 1:-16811873 MsG0180001172.01.T01:CDS
TGTGTTCTCTTTGCCACTCC+TGG 0.217465 1:-16809349 MsG0180001172.01.T01:CDS
ACGTATCACAAGATGCTTAT+TGG 0.230030 1:-16810522 MsG0180001172.01.T01:CDS
TTTAGGCTCTTGTGTTATAT+TGG 0.240245 1:-16806521 MsG0180001172.01.T01:three_prime_UTR
AGTATGTGTCTTTAATCTTC+TGG 0.243543 1:+16810490 None:intergenic
CATTTCTGAAACTTGAAGTT+TGG 0.247182 1:+16807185 None:intergenic
GAGGGAAACAGTTAACATTT+TGG 0.248514 1:-16806879 MsG0180001172.01.T01:three_prime_UTR
GTATTATTTAGATATTTAAT+TGG 0.249871 1:-16806468 MsG0180001172.01.T01:three_prime_UTR
AAACTATGTGCTCAGAATTT+AGG 0.275815 1:-16806538 MsG0180001172.01.T01:three_prime_UTR
TTAGTTTACATATTGGTAAA+TGG 0.280134 1:-16806982 MsG0180001172.01.T01:exon
CTTTGATGTTGGAAGACTTT+CGG 0.307404 1:-16816195 MsG0180001172.01.T01:CDS
TATTATTTAGATATTTAATT+GGG 0.315627 1:-16806467 MsG0180001172.01.T01:three_prime_UTR
CACTGACTCTAAAGGGATAA+TGG 0.318276 1:-16807408 MsG0180001172.01.T01:CDS
GGAGAATAATAATAATAAAA+AGG 0.321558 1:-16807063 MsG0180001172.01.T01:CDS
TCATCTTCAACTTGAAGTTC+AGG 0.337544 1:+16807113 None:intergenic
TTCATATTCACAGTTTGCTT+TGG 0.338382 1:+16806778 None:intergenic
GCCACTCCTGGGATGATACT+TGG 0.350356 1:-16809337 MsG0180001172.01.T01:CDS
CATTGTAGAGCTCTGAGTTA+TGG 0.362361 1:-16806732 MsG0180001172.01.T01:three_prime_UTR
CAAGTAACTTGATTGAGAAT+AGG 0.364073 1:-16806625 MsG0180001172.01.T01:three_prime_UTR
TGCACTAGCATAACATGCTT+TGG 0.365510 1:+16807365 None:intergenic
GCACTAGCATAACATGCTTT+GGG 0.369001 1:+16807366 None:intergenic
CTTACAATTTCGTTGTTTGC+AGG 0.379227 1:+16807272 None:intergenic
ATGGGGTTTAGTTTACATAT+TGG 0.380933 1:-16806989 MsG0180001172.01.T01:exon
AAGAGCAGCAGATGGAGTTT+TGG 0.382873 1:-16807090 MsG0180001172.01.T01:CDS
GAAAGTGTTGGTTGATCGTC+GGG 0.383630 1:-16816173 MsG0180001172.01.T01:CDS
TTCTTACATTCAAAGCTTTG+TGG 0.383654 1:-16806913 MsG0180001172.01.T01:three_prime_UTR
TGCAATGTTCTATGTAAAAG+TGG 0.387426 1:-16814458 MsG0180001172.01.T01:CDS
GTTCCTATCTACTTCTCATC+AGG 0.393377 1:-16811058 MsG0180001172.01.T01:intron
TTCAATAAACGTGCAGGTGC+TGG 0.407652 1:-16818058 MsG0180001172.01.T01:CDS
CCTTACTTCACTGAAGTTTG+TGG 0.411080 1:-16817750 MsG0180001172.01.T01:CDS
GCCGCTCCTAGGTGTCTATC+TGG 0.418382 1:+16814394 None:intergenic
CTTACTTCACTGAAGTTTGT+GGG 0.419379 1:-16817749 MsG0180001172.01.T01:CDS
CTTATTCCAACATTTGCTCT+TGG 0.425564 1:-16811837 MsG0180001172.01.T01:CDS
CGACCCACCGTCATATAAAC+TGG 0.428832 1:+16817717 None:intergenic
CGCACATCTATCTGAGTATC+GGG 0.431971 1:+16808477 None:intergenic
ATCAATTTCAATAAACGTGC+AGG 0.434836 1:-16818064 MsG0180001172.01.T01:CDS
GTGTTCTCTTTGCCACTCCT+GGG 0.435665 1:-16809348 MsG0180001172.01.T01:CDS
CTTCTTACTCAGTTATAAGA+AGG 0.438009 1:+16814347 None:intergenic
TGAAAATACATACGGCTTTG+AGG 0.440006 1:+16813496 None:intergenic
GTCCTCACACTGACTCTAAA+GGG 0.442382 1:-16807415 MsG0180001172.01.T01:CDS
AATTTCGTTGTTTGCAGGAT+GGG 0.443574 1:+16807277 None:intergenic
TAACTGATTCTCATTCCATC+TGG 0.448389 1:+16806691 None:intergenic
ACGTATCGTAGTTGCATAAG+TGG 0.451707 1:+16813548 None:intergenic
AAACCTGATGAGAAGTAGAT+AGG 0.452202 1:+16811055 None:intergenic
AGTCCTCACACTGACTCTAA+AGG 0.462808 1:-16807416 MsG0180001172.01.T01:CDS
TTGATGTTGGTGCAGTCACT+TGG 0.464421 1:-16817790 MsG0180001172.01.T01:intron
TAACTGTTTCCCTCGAGATC+AGG 0.465353 1:+16806888 None:intergenic
CATAATATGCACGTATCTGC+AGG 0.468751 1:+16815594 None:intergenic
AGTTTGCTTTGGTTGTACTT+TGG 0.471698 1:+16806789 None:intergenic
CTGGGAGCGCATGAATTTGA+AGG 0.471772 1:-16811080 MsG0180001172.01.T01:CDS
CATAAATGTGTTTCTGGAGG+AGG 0.473029 1:-16811867 MsG0180001172.01.T01:CDS
GGGATCTGTATCAACTTTGG+TGG 0.484392 1:+16808497 None:intergenic
AGCTTTGTCTCCTTTGATGT+TGG 0.487734 1:-16816206 MsG0180001172.01.T01:CDS
AAATTGACAGATTCATCAGT+TGG 0.495232 1:-16807444 MsG0180001172.01.T01:intron
AAAAGTGGGAGACGCAGAAA+TGG 0.495259 1:-16814443 MsG0180001172.01.T01:CDS
GACGCAGAAATGGTTTATAC+AGG 0.495611 1:-16814433 MsG0180001172.01.T01:CDS
TGGAATGAGAATCAGTTAAA+CGG 0.496563 1:-16806686 MsG0180001172.01.T01:three_prime_UTR
AGGTCTATGTTAGATGCTCC+TGG 0.498744 1:-16809376 MsG0180001172.01.T01:CDS
GGAAAGTGTTGGTTGATCGT+CGG 0.500379 1:-16816174 MsG0180001172.01.T01:CDS
ATCACAAGATGCTTATTGGT+TGG 0.501492 1:-16810518 MsG0180001172.01.T01:CDS
TATTGTATGGCTGGAACTGT+AGG 0.504776 1:-16808543 MsG0180001172.01.T01:CDS
CACAGTCTGCTTCAAATCTA+CGG 0.509906 1:+16815631 None:intergenic
CAATTTCGTTGTTTGCAGGA+TGG 0.510023 1:+16807276 None:intergenic
CGAAAGTCTTCCAACATCAA+AGG 0.514799 1:+16816196 None:intergenic
ATTTGCTCTTGGAAGAGCTC+AGG 0.515179 1:-16811826 MsG0180001172.01.T01:intron
TCAGATAGATGTGCGTTGCC+AGG 0.518989 1:-16808469 MsG0180001172.01.T01:intron
ACGCACATCTATCTGAGTAT+CGG 0.521836 1:+16808476 None:intergenic
CCACAAACTTCAGTGAAGTA+AGG 0.522094 1:+16817750 None:intergenic
ATATACCTAAAACTAGAGCT+TGG 0.522967 1:+16818143 None:intergenic
AAAATCTTGTCGCTTTGCCT+GGG 0.523181 1:-16809270 MsG0180001172.01.T01:intron
CTTTGTGGTGCCTGATCTCG+AGG 0.524870 1:-16806898 MsG0180001172.01.T01:three_prime_UTR
ATCGGGATCTGTATCAACTT+TGG 0.527660 1:+16808494 None:intergenic
GGATCTGTATCAACTTTGGT+GGG 0.527910 1:+16808498 None:intergenic
ATTACTGAGTGCATGAAGAA+AGG 0.528301 1:-16816121 MsG0180001172.01.T01:intron
GATCAATTTGAGCCGCTCCT+AGG 0.528508 1:+16814383 None:intergenic
GTTTACATATTGGTAAATGG+TGG 0.530895 1:-16806979 MsG0180001172.01.T01:three_prime_UTR
GTTGGTTGATCGTCGGGGTG+AGG 0.531692 1:-16816167 MsG0180001172.01.T01:CDS
CAGATACGTGCATATTATGC+AGG 0.531738 1:-16815590 MsG0180001172.01.T01:CDS
TGTGTAATAGTCAAAATCAA+TGG 0.533569 1:-16818016 MsG0180001172.01.T01:CDS
TTCAAAATGCGCTCGAGAGA+GGG 0.542927 1:-16813523 MsG0180001172.01.T01:CDS
GTAGGGCATAAATTAACGTC+AGG 0.553447 1:-16808525 MsG0180001172.01.T01:CDS
GAAGATGAAAGAGCAGCAGA+TGG 0.556757 1:-16807098 MsG0180001172.01.T01:CDS
ATTCAAAATGCGCTCGAGAG+AGG 0.557482 1:-16813524 MsG0180001172.01.T01:CDS
AAGCAAACTGTGAATATGAA+AGG 0.561293 1:-16806775 MsG0180001172.01.T01:three_prime_UTR
GCAGGTGCTGGTCAAGATGT+TGG 0.564995 1:-16818046 MsG0180001172.01.T01:CDS
TGCAGTCACTTGGATCATGT+TGG 0.565848 1:-16817780 MsG0180001172.01.T01:intron
TGTTGGACGAAAAGAAGCAT+GGG 0.566001 1:-16807007 MsG0180001172.01.T01:CDS
ATGTGTTTCTGGAGGAGGAA+AGG 0.566477 1:-16811862 MsG0180001172.01.T01:CDS
AGAATGAAATGAACGAAGGA+AGG 0.570936 1:+16818115 None:intergenic
ATGTTGGACGAAAAGAAGCA+TGG 0.572934 1:-16807008 MsG0180001172.01.T01:CDS
GAGGCTTCTGCATTTACGTA+CGG 0.574178 1:+16807236 None:intergenic
GCATGGAGAGAAGCCTAAGA+TGG 0.575124 1:-16807345 MsG0180001172.01.T01:CDS
ATTATTTAGATATTTAATTG+GGG 0.576235 1:-16806466 MsG0180001172.01.T01:three_prime_UTR
TGTGAATATGAAAGGTTGCA+AGG 0.579136 1:-16806767 MsG0180001172.01.T01:three_prime_UTR
GCTCTTCCAAGAGCAAATGT+TGG 0.581537 1:+16811831 None:intergenic
GCAAAGAGAACACAAGGACC+AGG 0.582633 1:+16809358 None:intergenic
ACTCCTGGGATGATACTTGG+TGG 0.584099 1:-16809334 MsG0180001172.01.T01:CDS
GTTCATAAATGTGTTTCTGG+AGG 0.584756 1:-16811870 MsG0180001172.01.T01:CDS
AAGCATGTTATGCTAGTGCA+TGG 0.586256 1:-16807362 MsG0180001172.01.T01:CDS
ATTGTATGGCTGGAACTGTA+GGG 0.588783 1:-16808542 MsG0180001172.01.T01:CDS
GCAATGTTCTATGTAAAAGT+GGG 0.592359 1:-16814457 MsG0180001172.01.T01:CDS
GTTTCAGAAATGCAGTTCAG+TGG 0.592784 1:-16807174 MsG0180001172.01.T01:CDS
GGAAGACTTTCGGAAAGTGT+TGG 0.601038 1:-16816185 MsG0180001172.01.T01:CDS
CTGCAGTTCACAAATTTGAG+AGG 0.608297 1:-16809396 MsG0180001172.01.T01:intron
AATCCACCAAGTATCATCCC+AGG 0.609445 1:+16809331 None:intergenic
CACTAGCATAACATGCTTTG+GGG 0.609757 1:+16807367 None:intergenic
ACTGAAGTTTGTGGGTACAG+TGG 0.613961 1:-16817741 MsG0180001172.01.T01:CDS
ACCAAGTATCATCCCAGGAG+TGG 0.615613 1:+16809336 None:intergenic
AAAATCAAATGCATTATGTG+TGG 0.616999 1:+16810467 None:intergenic
AAGACAATCATGTTCGATTG+CGG 0.620905 1:-16817992 MsG0180001172.01.T01:CDS
TGAATTAACAGAGCACCAGA+TGG 0.620916 1:-16806706 MsG0180001172.01.T01:three_prime_UTR
ATCCCTTTAGAGTCAGTGTG+AGG 0.643471 1:+16807413 None:intergenic
GGAGTGGCAAAGAGAACACA+AGG 0.643913 1:+16809352 None:intergenic
ATGACACCAGATAGACACCT+AGG 0.654218 1:-16814400 MsG0180001172.01.T01:CDS
CAGTGGACCAGTTTATATGA+CGG 0.666288 1:-16817724 MsG0180001172.01.T01:intron
GTTGGACGAAAAGAAGCATG+GGG 0.687673 1:-16807006 MsG0180001172.01.T01:CDS
ACCAGATAGACACCTAGGAG+CGG 0.694856 1:-16814395 MsG0180001172.01.T01:CDS
TTTGTGGTGCCTGATCTCGA+GGG 0.695575 1:-16806897 MsG0180001172.01.T01:three_prime_UTR
ACATAGAATGAAATGAACGA+AGG 0.701713 1:+16818111 None:intergenic
TGCTTCAAAAGAGAGATGCG+CGG 0.704215 1:+16806832 None:intergenic
AAAGTGTTGGTTGATCGTCG+GGG 0.731605 1:-16816172 MsG0180001172.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAAAATATAATAAAAA+TGG + Chr1:16812254-16812273 None:intergenic 0.0%
!! AGAAATTATTATTTAAAAAC+AGG - Chr1:16809450-16809469 MsG0180001172.01.T01:intron 10.0%
!! ATTATTTAGATATTTAATTG+GGG - Chr1:16818146-16818165 MsG0180001172.01.T01:CDS 10.0%
!! CTTTATAAGTAAATTTAATT+TGG + Chr1:16815062-16815081 None:intergenic 10.0%
!! GAAATTATTATTTAAAAACA+GGG - Chr1:16809451-16809470 MsG0180001172.01.T01:intron 10.0%
!! GTATTATTTAGATATTTAAT+TGG - Chr1:16818144-16818163 MsG0180001172.01.T01:CDS 10.0%
!! TAAAGAAAAAGAATATAAAT+GGG + Chr1:16815372-16815391 None:intergenic 10.0%
!! TAAGAATTAATAACTAATAA+GGG + Chr1:16807901-16807920 None:intergenic 10.0%
!! TTCCTATTTAATTAATTTAA+GGG + Chr1:16808117-16808136 None:intergenic 10.0%
!! TTTCCTATTTAATTAATTTA+AGG + Chr1:16808118-16808137 None:intergenic 10.0%
!!! GTTTTATTTGTTATTATTTT+CGG - Chr1:16807150-16807169 MsG0180001172.01.T01:CDS 10.0%
!!! TATCAATATCATTTTTTTTT+TGG + Chr1:16813251-16813270 None:intergenic 10.0%
!! AAATAAGTAAATTAAAAACC+AGG - Chr1:16816284-16816303 MsG0180001172.01.T01:intron 15.0%
!! AAATTTCCTTGTAAATAAAA+GGG + Chr1:16816185-16816204 None:intergenic 15.0%
!! AACAACTTTATTAGAATATT+TGG - Chr1:16811735-16811754 MsG0180001172.01.T01:intron 15.0%
!! AACCCTTAAATTAATTAAAT+AGG - Chr1:16808112-16808131 MsG0180001172.01.T01:intron 15.0%
!! ACATAAAGAAAAATAATACT+AGG + Chr1:16815968-16815987 None:intergenic 15.0%
!! AGCTATATATAATTGTTTAA+TGG - Chr1:16811704-16811723 MsG0180001172.01.T01:intron 15.0%
!! AGTAACTATATTAAGATATT+TGG + Chr1:16813187-16813206 None:intergenic 15.0%
!! ATAACAAGATTAACAAATTA+AGG + Chr1:16810796-16810815 None:intergenic 15.0%
!! ATATTTAATAATGGTTCATT+AGG - Chr1:16810940-16810959 MsG0180001172.01.T01:intron 15.0%
!! ATGTTCAATTATACAAATTA+GGG + Chr1:16810827-16810846 None:intergenic 15.0%
!! CATAAAGAAAAATAATACTA+GGG + Chr1:16815967-16815986 None:intergenic 15.0%
!! CTAAGAATTAATAACTAATA+AGG + Chr1:16807902-16807921 None:intergenic 15.0%
!! CTATATATAATTGTTTAATG+GGG - Chr1:16811706-16811725 MsG0180001172.01.T01:intron 15.0%
!! GATGAAAATTAAAAATTCAT+AGG + Chr1:16813887-16813906 None:intergenic 15.0%
!! GCTATATATAATTGTTTAAT+GGG - Chr1:16811705-16811724 MsG0180001172.01.T01:intron 15.0%
!! GGAGAATAATAATAATAAAA+AGG - Chr1:16817549-16817568 MsG0180001172.01.T01:intron 15.0%
!! GTAAAGAAAAAGAATATAAA+TGG + Chr1:16815373-16815392 None:intergenic 15.0%
!! GTTTCTTCAATATTTAATAA+TGG - Chr1:16810931-16810950 MsG0180001172.01.T01:intron 15.0%
!! TAAATTTCCTTGTAAATAAA+AGG + Chr1:16816186-16816205 None:intergenic 15.0%
!! TATATATAGCTAATAAACTT+GGG + Chr1:16811695-16811714 None:intergenic 15.0%
!! TATGTTCAATTATACAAATT+AGG + Chr1:16810828-16810847 None:intergenic 15.0%
!! TATTTAATAATGGTTCATTA+GGG - Chr1:16810941-16810960 MsG0180001172.01.T01:intron 15.0%
!! TCTAACTATATAGATTTATT+AGG + Chr1:16816667-16816686 None:intergenic 15.0%
!! TGAAATTTCAAATTTATACA+AGG - Chr1:16808166-16808185 MsG0180001172.01.T01:intron 15.0%
!! TTAAATATGTGATATAATGA+TGG - Chr1:16814928-16814947 MsG0180001172.01.T01:intron 15.0%
!! TTACATGTTTATTGTTTATA+GGG - Chr1:16810362-16810381 MsG0180001172.01.T01:intron 15.0%
!! TTATAAATTGTTAAGGTTAT+TGG - Chr1:16810128-16810147 MsG0180001172.01.T01:intron 15.0%
!! TTATATATAGCTAATAAACT+TGG + Chr1:16811696-16811715 None:intergenic 15.0%
!! TTTAATCGAAAAAATGAAAT+TGG + Chr1:16810762-16810781 None:intergenic 15.0%
!! TTTACATGTTTATTGTTTAT+AGG - Chr1:16810361-16810380 MsG0180001172.01.T01:intron 15.0%
!!! ACAATTATTATTTTTTGGAA+TGG - Chr1:16809570-16809589 MsG0180001172.01.T01:intron 15.0%
!!! ACATTAATATTTTGTAATTC+AGG - Chr1:16810003-16810022 MsG0180001172.01.T01:intron 15.0%
!!! ATAGCAATAAAGTTATTTTT+TGG - Chr1:16813925-16813944 MsG0180001172.01.T01:intron 15.0%
!!! GATGTACAATTATTATTTTT+TGG - Chr1:16809565-16809584 MsG0180001172.01.T01:intron 15.0%
!!! TAATTTGTATAATTGAACAT+AGG - Chr1:16810827-16810846 MsG0180001172.01.T01:intron 15.0%
!!! TAGTTTTAAATGTAATACTT+TGG + Chr1:16807681-16807700 None:intergenic 15.0%
!!! TTAATTTTCATCATTGATTT+AGG - Chr1:16813895-16813914 MsG0180001172.01.T01:intron 15.0%
!!! TTGATATTTTTTTCAATGTT+TGG - Chr1:16813265-16813284 MsG0180001172.01.T01:intron 15.0%
!!! TTTTTTTGTTGTTAGAAAAA+TGG + Chr1:16814337-16814356 None:intergenic 15.0%
!! AAAAAAGAAAAACAGTAGAT+TGG - Chr1:16817081-16817100 MsG0180001172.01.T01:intron 20.0%
!! AAACAATCAACATAGAAATA+TGG + Chr1:16816414-16816433 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG - Chr1:16807695-16807714 MsG0180001172.01.T01:intron 20.0%
!! AAACTATCCTTATTAACTAT+TGG + Chr1:16807705-16807724 None:intergenic 20.0%
!! AATAGTTAATAAGGATAGTT+TGG - Chr1:16807704-16807723 MsG0180001172.01.T01:intron 20.0%
!! ACATTATTTGAAAAAGCTTA+TGG + Chr1:16807394-16807413 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + Chr1:16807618-16807637 None:intergenic 20.0%
!! AGTACTAAAATATCAATTCA+AGG + Chr1:16810081-16810100 None:intergenic 20.0%
!! ATAGTTATTACAAAGAAACA+GGG - Chr1:16811378-16811397 MsG0180001172.01.T01:intron 20.0%
!! ATTTCAAATTTATACAAGGA+AGG - Chr1:16808170-16808189 MsG0180001172.01.T01:intron 20.0%
!! CTAAATGATTATGAGATTTA+AGG - Chr1:16814474-16814493 MsG0180001172.01.T01:intron 20.0%
!! GCATATACAAGTAAATAAAT+CGG - Chr1:16816250-16816269 MsG0180001172.01.T01:intron 20.0%
!! GCTAATTAAAGAAAAAGTAA+GGG + Chr1:16813084-16813103 None:intergenic 20.0%
!! GCTACTATAAAAGTTAAAAA+AGG + Chr1:16815402-16815421 None:intergenic 20.0%
!! GGTTAAATAAAGAAAAATGA+GGG + Chr1:16810741-16810760 None:intergenic 20.0%
!! TATAATAAAAATAGGCTGAA+TGG + Chr1:16810113-16810132 None:intergenic 20.0%
!! TATTCTGTTTATGTTATGTA+TGG + Chr1:16809212-16809231 None:intergenic 20.0%
!! TCAAGCAAAATTTATTATTG+TGG + Chr1:16808354-16808373 None:intergenic 20.0%
!! TCAATAATAAAAGAAAGAAG+TGG - Chr1:16813806-16813825 MsG0180001172.01.T01:intron 20.0%
!! TGGTTAAATAAAGAAAAATG+AGG + Chr1:16810742-16810761 None:intergenic 20.0%
!! TTAAGTTTAACTAAATGATC+AGG + Chr1:16809810-16809829 None:intergenic 20.0%
!! TTAGTTTACATATTGGTAAA+TGG - Chr1:16817630-16817649 MsG0180001172.01.T01:intron 20.0%
!! TTATTATTGAAAATTGAAGC+AGG + Chr1:16813796-16813815 None:intergenic 20.0%
!! TTCTACTAACTATTTGAATA+TGG - Chr1:16814031-16814050 MsG0180001172.01.T01:intron 20.0%
!!! AAAAAGCATGTGATAATATT+TGG + Chr1:16813625-16813644 None:intergenic 20.0%
!!! AAAATGCTTTTAAGTTCTAT+TGG - Chr1:16815016-16815035 MsG0180001172.01.T01:intron 20.0%
!!! AAGATTTCTGAGATAAAATA+AGG + Chr1:16811190-16811209 None:intergenic 20.0%
!!! AAGTAAAATGAGTTTTTTCT+AGG + Chr1:16811525-16811544 None:intergenic 20.0%
!!! AATGCATTTGATTTTAAGAA+TGG - Chr1:16814153-16814172 MsG0180001172.01.T01:intron 20.0%
!!! AGAAAAAAGCTTTAGTAAAT+TGG - Chr1:16814876-16814895 MsG0180001172.01.T01:intron 20.0%
!!! AGATTTAACACATGTTATTT+CGG - Chr1:16809098-16809117 MsG0180001172.01.T01:intron 20.0%
!!! AGCTTCAAATTAATTGATTT+AGG - Chr1:16812720-16812739 MsG0180001172.01.T01:intron 20.0%
!!! ATGATAGATATTTTCATATC+TGG - Chr1:16814823-16814842 MsG0180001172.01.T01:intron 20.0%
!!! ATTTACTTATTTTGATCAGT+AGG + Chr1:16816276-16816295 None:intergenic 20.0%
!!! CTAAAACCAAAATATTTTCA+AGG - Chr1:16812372-16812391 MsG0180001172.01.T01:intron 20.0%
!!! CTAGAAGTGTTTATTTAATT+TGG - Chr1:16811162-16811181 MsG0180001172.01.T01:intron 20.0%
!!! GAAAATAAAAAACGTTTTCT+CGG + Chr1:16811777-16811796 None:intergenic 20.0%
!!! GAATTTTTGTGTAAATAAGA+TGG - Chr1:16809148-16809167 MsG0180001172.01.T01:intron 20.0%
!!! GTTTTTGTATTAACATTTGT+TGG - Chr1:16808232-16808251 MsG0180001172.01.T01:intron 20.0%
!!! TTCTGATTTGACAATTTTTT+CGG + Chr1:16809188-16809207 None:intergenic 20.0%
!!! TTTTGAAGCATTATTGTTTT+AGG - Chr1:16817793-16817812 MsG0180001172.01.T01:intron 20.0%
!!! TTTTTGTAGTATCTATATGT+TGG - Chr1:16808534-16808553 MsG0180001172.01.T01:CDS 20.0%
! AAAATCAAATGCATTATGTG+TGG + Chr1:16814148-16814167 None:intergenic 25.0%
! AAAATTCACAAGAACTTCTA+TGG + Chr1:16809135-16809154 None:intergenic 25.0%
! AAAGATATAGTATAGTCACT+TGG + Chr1:16816878-16816897 None:intergenic 25.0%
! AAAGTAATGCTAAGTTTAAC+AGG - Chr1:16808082-16808101 MsG0180001172.01.T01:intron 25.0%
! AAATCCAGCATAAAACATTA+AGG + Chr1:16813012-16813031 None:intergenic 25.0%
! AAATGAAAAGATGATAGCAT+AGG + Chr1:16812227-16812246 None:intergenic 25.0%
! AATTCTTCAGAAGACTTATA+TGG - Chr1:16816928-16816947 MsG0180001172.01.T01:intron 25.0%
! AATTGGTGTATCACATTTAA+AGG - Chr1:16815471-16815490 MsG0180001172.01.T01:intron 25.0%
! ACAAGATTAACAAATTAAGG+TGG + Chr1:16810793-16810812 None:intergenic 25.0%
! ACATAAAGGTTGAAGTAATA+AGG + Chr1:16810648-16810667 None:intergenic 25.0%
! ACATGTTTATCAAAGTTAGA+GGG + Chr1:16814963-16814982 None:intergenic 25.0%
! ACCAAGTTATTATGATATGT+AGG - Chr1:16813484-16813503 MsG0180001172.01.T01:intron 25.0%
! ACTATATCTTTCAATCTTTG+AGG - Chr1:16816887-16816906 MsG0180001172.01.T01:intron 25.0%
! AGAAAAACTAAATGAAGGTT+TGG - Chr1:16815909-16815928 MsG0180001172.01.T01:intron 25.0%
! AGAGTCTATATTGTAATCAA+GGG + Chr1:16811412-16811431 None:intergenic 25.0%
! AGATACTACAAAAAGTAAAG+AGG + Chr1:16808528-16808547 None:intergenic 25.0%
! ATAATAAAAGAAAGAAGTGG+AGG - Chr1:16813809-16813828 MsG0180001172.01.T01:intron 25.0%
! ATACTTAAAGTGATGATACA+AGG - Chr1:16816851-16816870 MsG0180001172.01.T01:intron 25.0%
! ATATTTGGACCAAGTTTATT+TGG - Chr1:16811750-16811769 MsG0180001172.01.T01:intron 25.0%
! ATCTACAATTACTCTTATGT+TGG - Chr1:16812691-16812710 MsG0180001172.01.T01:intron 25.0%
! ATGGACAAAATTTGTAACAA+CGG + Chr1:16816827-16816846 None:intergenic 25.0%
! ATGTGTAAATAATAGAAGAG+AGG + Chr1:16811645-16811664 None:intergenic 25.0%
! CAATGAGAAAAACTAAATGA+AGG - Chr1:16815904-16815923 MsG0180001172.01.T01:intron 25.0%
! CATCTATAAAATTACAAGAG+AGG - Chr1:16814724-16814743 MsG0180001172.01.T01:intron 25.0%
! CATTTCTTTGTTCTTAAATG+AGG - Chr1:16812500-16812519 MsG0180001172.01.T01:intron 25.0%
! CGTTTATCATTTAAGTGTTT+AGG - Chr1:16807266-16807285 MsG0180001172.01.T01:CDS 25.0%
! CTAAAATAATGATAGTTGAC+TGG - Chr1:16814633-16814652 MsG0180001172.01.T01:intron 25.0%
! CTATATCTTTCAATCTTTGA+GGG - Chr1:16816888-16816907 MsG0180001172.01.T01:intron 25.0%
! CTATTCAATTCTGTGATAAA+TGG + Chr1:16816556-16816575 None:intergenic 25.0%
! CTCCTAAAACAATAAAACAA+GGG + Chr1:16812189-16812208 None:intergenic 25.0%
! CTTTCTTCCAAATTAAAACA+AGG + Chr1:16812529-16812548 None:intergenic 25.0%
! GATAGTTATTACAAAGAAAC+AGG - Chr1:16811377-16811396 MsG0180001172.01.T01:intron 25.0%
! GGCTAATTAAAGAAAAAGTA+AGG + Chr1:16813085-16813104 None:intergenic 25.0%
! GTAAGTTGTAAACATAACAA+TGG + Chr1:16810879-16810898 None:intergenic 25.0%
! GTCAACTTCAAATATAACTA+AGG + Chr1:16811254-16811273 None:intergenic 25.0%
! TAATAAAAGAAAGAAGTGGA+GGG - Chr1:16813810-16813829 MsG0180001172.01.T01:intron 25.0%
! TACATGATATATATTGTAGC+TGG - Chr1:16808595-16808614 MsG0180001172.01.T01:intron 25.0%
! TACATGTTTATCAAAGTTAG+AGG + Chr1:16814964-16814983 None:intergenic 25.0%
! TAGAAATATGAACCAATCAT+TGG - Chr1:16810442-16810461 MsG0180001172.01.T01:intron 25.0%
! TAGAGTCTATATTGTAATCA+AGG + Chr1:16811413-16811432 None:intergenic 25.0%
! TAGTTATTACAAAGAAACAG+GGG - Chr1:16811379-16811398 MsG0180001172.01.T01:intron 25.0%
! TATAATCTGTGAAAGTAAAG+AGG + Chr1:16816319-16816338 None:intergenic 25.0%
! TCCAAAAATCTAACTAGTTA+GGG + Chr1:16810473-16810492 None:intergenic 25.0%
! TCCTAAAACAATAAAACAAG+GGG + Chr1:16812188-16812207 None:intergenic 25.0%
! TCCTACATATCATAATAACT+TGG + Chr1:16813488-16813507 None:intergenic 25.0%
! TCTACAAATCTATGAAAACA+GGG - Chr1:16811916-16811935 MsG0180001172.01.T01:intron 25.0%
! TGTGTAATAGTCAAAATCAA+TGG - Chr1:16806596-16806615 MsG0180001172.01.T01:three_prime_UTR 25.0%
! TGTTAAATCTATTACTGCAA+AGG + Chr1:16809088-16809107 None:intergenic 25.0%
! TGTTATGTTTACAACTTACA+AGG - Chr1:16810880-16810899 MsG0180001172.01.T01:intron 25.0%
! TTATAAATTCAGTTCCATGT+TGG - Chr1:16816037-16816056 MsG0180001172.01.T01:intron 25.0%
! TTATTCAATGAAGTCAATGT+AGG - Chr1:16806998-16807017 MsG0180001172.01.T01:exon 25.0%
! TTCAAAAAGATTTCACATTC+TGG - Chr1:16806683-16806702 MsG0180001172.01.T01:three_prime_UTR 25.0%
! TTCCAAAAATCTAACTAGTT+AGG + Chr1:16810474-16810493 None:intergenic 25.0%
! TTCTTAGATGTACTCAAATT+AGG - Chr1:16807215-16807234 MsG0180001172.01.T01:CDS 25.0%
! TTGTTCATCTTCTATCTAAT+CGG + Chr1:16815429-16815448 None:intergenic 25.0%
! TTTATACCAACTAACTGTAA+AGG + Chr1:16814442-16814461 None:intergenic 25.0%
! TTTGAATTTCGATAGCTAAA+CGG + Chr1:16813428-16813447 None:intergenic 25.0%
!! ATAACTCGTAATTTTATACG+AGG - Chr1:16809971-16809990 MsG0180001172.01.T01:intron 25.0%
!! ATGTTGTAATTTTTGCTTGA+TGG - Chr1:16808264-16808283 MsG0180001172.01.T01:intron 25.0%
!! GTATCACATTTAAAGGTATA+TGG - Chr1:16815478-16815497 MsG0180001172.01.T01:intron 25.0%
!! TGTTACAAATTTTGTCCATA+AGG - Chr1:16816828-16816847 MsG0180001172.01.T01:intron 25.0%
!! TGTTGTAATTTTTGCTTGAT+GGG - Chr1:16808265-16808284 MsG0180001172.01.T01:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+TGG + Chr1:16807241-16807260 None:intergenic 25.0%
!! TTACAATCGAATCTCTTTTA+CGG - Chr1:16806523-16806542 MsG0180001172.01.T01:three_prime_UTR 25.0%
!! TTATATTTGAAGTTGACCTT+TGG - Chr1:16811257-16811276 MsG0180001172.01.T01:intron 25.0%
!! TTGTATTAACATTTGTTGGA+TGG - Chr1:16808236-16808255 MsG0180001172.01.T01:intron 25.0%
!! TTTCTATGTTGATTGTTTGT+TGG - Chr1:16816416-16816435 MsG0180001172.01.T01:intron 25.0%
!!! ATATGGATTTTTTTTCTTCC+AGG - Chr1:16814048-16814067 MsG0180001172.01.T01:intron 25.0%
!!! CTTCATTTAGTTTTTCTCAT+TGG + Chr1:16815906-16815925 None:intergenic 25.0%
!!! CTTGTTTTATTGTTTTAGGA+GGG - Chr1:16812188-16812207 MsG0180001172.01.T01:intron 25.0%
!!! GCAAGTTTTGAAAATACATA+CGG + Chr1:16811127-16811146 None:intergenic 25.0%
!!! TAGTTAGATTTTTGGAAAGT+TGG - Chr1:16810477-16810496 MsG0180001172.01.T01:CDS 25.0%
!!! TGTGAAATCTTTTTGAAATC+AGG + Chr1:16806680-16806699 None:intergenic 25.0%
!!! TTCTTTAATTAGCCTTTTAC+AGG - Chr1:16813091-16813110 MsG0180001172.01.T01:intron 25.0%
!!! TTTGTTTTGAAAGATTTGTG+TGG - Chr1:16811855-16811874 MsG0180001172.01.T01:CDS 25.0%
AAACTATGTGCTCAGAATTT+AGG - Chr1:16818074-16818093 MsG0180001172.01.T01:CDS 30.0%
AAAGAAAAACAGTAGATTGG+TGG - Chr1:16817084-16817103 MsG0180001172.01.T01:intron 30.0%
AAAGGAATAAGTTCACCTAA+TGG + Chr1:16809354-16809373 None:intergenic 30.0%
AAAGTAAATGTAGCCTTTGT+TGG - Chr1:16807980-16807999 MsG0180001172.01.T01:intron 30.0%
AAATTGACAGATTCATCAGT+TGG - Chr1:16817168-16817187 MsG0180001172.01.T01:intron 30.0%
AACCTCTATTGCTTAAACAT+TGG - Chr1:16816453-16816472 MsG0180001172.01.T01:intron 30.0%
AAGAAAAACAGTAGATTGGT+GGG - Chr1:16817085-16817104 MsG0180001172.01.T01:intron 30.0%
AAGAGACAAGAAAAGAAATG+GGG + Chr1:16815815-16815834 None:intergenic 30.0%
AAGCAAACTGTGAATATGAA+AGG - Chr1:16817837-16817856 MsG0180001172.01.T01:intron 30.0%
AATAAGTGTATCTGTAAACC+AGG + Chr1:16813598-16813617 None:intergenic 30.0%
AATACTAGGGAAAAGACAAA+GGG + Chr1:16815954-16815973 None:intergenic 30.0%
AATATTGTGAAACACTGGAA+TGG - Chr1:16809713-16809732 MsG0180001172.01.T01:intron 30.0%
ACATAGAATGAAATGAACGA+AGG + Chr1:16806504-16806523 None:intergenic 30.0%
ACATTATAAATGATGAACCG+TGG + Chr1:16813052-16813071 None:intergenic 30.0%
ACTTTATTGTAAGCAAACGT+AGG + Chr1:16809650-16809669 None:intergenic 30.0%
AGAGAGAAACTAGAATTACA+TGG - Chr1:16808772-16808791 MsG0180001172.01.T01:intron 30.0%
AGCTATCGAAATTCAAAACA+TGG - Chr1:16813431-16813450 MsG0180001172.01.T01:intron 30.0%
AGGTTCATAATGATATCATG+AGG + Chr1:16811454-16811473 None:intergenic 30.0%
AGTATGTGTCTTTAATCTTC+TGG + Chr1:16814125-16814144 None:intergenic 30.0%
AGTCAAACATTTCATCAAAC+AGG + Chr1:16806928-16806947 None:intergenic 30.0%
ATAAGTGTATCTGTAAACCA+GGG + Chr1:16813597-16813616 None:intergenic 30.0%
ATATACCTAAAACTAGAGCT+TGG + Chr1:16806472-16806491 None:intergenic 30.0%
ATATCATTATGAACCTGTAG+GGG - Chr1:16811458-16811477 MsG0180001172.01.T01:intron 30.0%
ATCAATTTCAATAAACGTGC+AGG - Chr1:16806548-16806567 MsG0180001172.01.T01:three_prime_UTR 30.0%
ATGTATAGTACAAACTGACA+TGG - Chr1:16817015-16817034 MsG0180001172.01.T01:intron 30.0%
ATGTCAAAAATGTCCAACAA+AGG + Chr1:16807996-16808015 None:intergenic 30.0%
ATTCGGGAAACATTTCATAA+AGG + Chr1:16808036-16808055 None:intergenic 30.0%
CAAGTAACTTGATTGAGAAT+AGG - Chr1:16817987-16818006 MsG0180001172.01.T01:CDS 30.0%
CAATAAGATTGACACAAATG+AGG + Chr1:16815879-16815898 None:intergenic 30.0%
CACTAACTTCAATGAAGATT+TGG - Chr1:16815729-16815748 MsG0180001172.01.T01:intron 30.0%
CATCACTTTAAGTATCCTTA+TGG + Chr1:16816846-16816865 None:intergenic 30.0%
CATTTCATCAAACAGGTAAT+AGG + Chr1:16806921-16806940 None:intergenic 30.0%
CCAAAAATCTAACTAGTTAG+GGG + Chr1:16810472-16810491 None:intergenic 30.0%
CCTCCTAAAACAATAAAACA+AGG + Chr1:16812190-16812209 None:intergenic 30.0%
CCTTAATTATAAGCAAAACC+AGG - Chr1:16809530-16809549 MsG0180001172.01.T01:intron 30.0%
CGAAGGATTTATATGTTATG+GGG - Chr1:16814590-16814609 MsG0180001172.01.T01:intron 30.0%
CTATTGTGATACTAACAACA+CGG - Chr1:16813833-16813852 MsG0180001172.01.T01:intron 30.0%
CTCATTTGTGTCAATCTTAT+TGG - Chr1:16815877-16815896 MsG0180001172.01.T01:intron 30.0%
CTCTACAAATCTATGAAAAC+AGG - Chr1:16811915-16811934 MsG0180001172.01.T01:intron 30.0%
CTGAAATGACATTTATAGAC+TGG + Chr1:16808707-16808726 None:intergenic 30.0%
CTTCAAATATAACTAAGGAC+AGG + Chr1:16811249-16811268 None:intergenic 30.0%
CTTCATTGAAGTTAGTGTAA+CGG + Chr1:16815726-16815745 None:intergenic 30.0%
CTTCTTACTCAGTTATAAGA+AGG + Chr1:16810268-16810287 None:intergenic 30.0%
GAAGAGACAAGAAAAGAAAT+GGG + Chr1:16815816-16815835 None:intergenic 30.0%
GATATCATTATGAACCTGTA+GGG - Chr1:16811457-16811476 MsG0180001172.01.T01:intron 30.0%
GCAATGTTCTATGTAAAAGT+GGG - Chr1:16810155-16810174 MsG0180001172.01.T01:intron 30.0%
GCGAAGGATTTATATGTTAT+GGG - Chr1:16814589-16814608 MsG0180001172.01.T01:intron 30.0%
GCGCTATAAATCTTAAATAC+TGG + Chr1:16812400-16812419 None:intergenic 30.0%
GCTTTAATTGTATTTGCAAG+AGG - Chr1:16809323-16809342 MsG0180001172.01.T01:CDS 30.0%
GTCATTGTTGTGGATATTAT+TGG - Chr1:16815696-16815715 MsG0180001172.01.T01:intron 30.0%
GTTTACATATTGGTAAATGG+TGG - Chr1:16817633-16817652 MsG0180001172.01.T01:intron 30.0%
TAAACATGTATTCATGTTCC+AGG - Chr1:16814974-16814993 MsG0180001172.01.T01:intron 30.0%
TAAATAATAGAAGAGAGGAG+AGG + Chr1:16811640-16811659 None:intergenic 30.0%
TAAATGTGATACACCAATTG+TGG + Chr1:16815470-16815489 None:intergenic 30.0%
TAATACTAGGGAAAAGACAA+AGG + Chr1:16815955-16815974 None:intergenic 30.0%
TAATTGTAGATCACTGTACT+GGG + Chr1:16812682-16812701 None:intergenic 30.0%
TAGGTTCATAAATGTGTTTC+TGG - Chr1:16812739-16812758 MsG0180001172.01.T01:intron 30.0%
TAGTAGTTTGGGAAAGAATT+GGG + Chr1:16811605-16811624 None:intergenic 30.0%
TATACAAGGAAGGAAACAAT+TGG - Chr1:16808180-16808199 MsG0180001172.01.T01:intron 30.0%
TATCTTCAACGTTGTATTGA+AGG - Chr1:16810323-16810342 MsG0180001172.01.T01:intron 30.0%
TCAAAATACACTTGACTACT+AGG + Chr1:16815521-16815540 None:intergenic 30.0%
TCCAGTATCATTCAAGATTA+GGG - Chr1:16809295-16809314 MsG0180001172.01.T01:CDS 30.0%
TGAAGAGACAAGAAAAGAAA+TGG + Chr1:16815817-16815836 None:intergenic 30.0%
TGAGCTGTATATCTTCATAT+TGG - Chr1:16813970-16813989 MsG0180001172.01.T01:intron 30.0%
TGATATCATTATGAACCTGT+AGG - Chr1:16811456-16811475 MsG0180001172.01.T01:intron 30.0%
TGCAATGTTCTATGTAAAAG+TGG - Chr1:16810154-16810173 MsG0180001172.01.T01:intron 30.0%
TGGAATGAGAATCAGTTAAA+CGG - Chr1:16817926-16817945 MsG0180001172.01.T01:CDS 30.0%
TTATTGTGGAATTACAACCA+AGG + Chr1:16808340-16808359 None:intergenic 30.0%
TTCATTGAAGTTAGTGTAAC+GGG + Chr1:16815725-16815744 None:intergenic 30.0%
TTCCAGACTATCCATTATAT+GGG + Chr1:16812122-16812141 None:intergenic 30.0%
TTCCTTGTAAATAAAAGGGT+GGG + Chr1:16816181-16816200 None:intergenic 30.0%
TTCTTACATTCAAAGCTTTG+TGG - Chr1:16817699-16817718 MsG0180001172.01.T01:intron 30.0%
TTGAAAGATTTGTGTGGAAA+TGG - Chr1:16811861-16811880 MsG0180001172.01.T01:CDS 30.0%
TTGAATTTCGATAGCTAAAC+GGG + Chr1:16813427-16813446 None:intergenic 30.0%
TTTAGGCTCTTGTGTTATAT+TGG - Chr1:16818091-16818110 MsG0180001172.01.T01:CDS 30.0%
TTTCCTTGTAAATAAAAGGG+TGG + Chr1:16816182-16816201 None:intergenic 30.0%
! AAATTGATAGTAAGTGATGC+AGG - Chr1:16814567-16814586 MsG0180001172.01.T01:intron 30.0%
! AATGTTTTATGCTGGATTTC+TGG - Chr1:16813013-16813032 MsG0180001172.01.T01:intron 30.0%
! AGATGAAATTTTGCTCATGT+TGG - Chr1:16817588-16817607 MsG0180001172.01.T01:intron 30.0%
! ATGGGGTTTAGTTTACATAT+TGG - Chr1:16817623-16817642 MsG0180001172.01.T01:intron 30.0%
! CCTTATTAGTCTGGAAATTT+GGG - Chr1:16815654-16815673 MsG0180001172.01.T01:intron 30.0%
! CTGGATCCTTGAAAATATTT+TGG + Chr1:16812381-16812400 None:intergenic 30.0%
! CTGTTTTCATAGATTTGTAG+AGG + Chr1:16811917-16811936 None:intergenic 30.0%
! CTTATTAGTCTGGAAATTTG+GGG - Chr1:16815655-16815674 MsG0180001172.01.T01:intron 30.0%
! CTTTTACAGGTCATCAAAAA+TGG - Chr1:16813104-16813123 MsG0180001172.01.T01:intron 30.0%
! GAAGAAAAATGTCTTTTGTG+CGG + Chr1:16813337-16813356 None:intergenic 30.0%
! GGCTTTGTATAACAGAATAA+TGG + Chr1:16814371-16814390 None:intergenic 30.0%
! TATGATGGAACTAGATGATA+TGG + Chr1:16809778-16809797 None:intergenic 30.0%
! TATGTGATATAATGATGGTG+TGG - Chr1:16814933-16814952 MsG0180001172.01.T01:intron 30.0%
! TATTTTGTTGGATGACTACT+GGG - Chr1:16813514-16813533 MsG0180001172.01.T01:CDS 30.0%
! TCCTTATTAGTCTGGAAATT+TGG - Chr1:16815653-16815672 MsG0180001172.01.T01:intron 30.0%
! TTAGCTTGAATAGTTAATCC+TGG + Chr1:16814069-16814088 None:intergenic 30.0%
! TTCATATTCACAGTTTGCTT+TGG + Chr1:16817837-16817856 None:intergenic 30.0%
! TTTGATGTTGTTGTTGATGT+TGG - Chr1:16806809-16806828 MsG0180001172.01.T01:three_prime_UTR 30.0%
!! AAACGACACTCATTTTGAAA+CGG - Chr1:16807787-16807806 MsG0180001172.01.T01:intron 30.0%
!! AAATATGGTTTGGTGATTTG+AGG + Chr1:16810676-16810695 None:intergenic 30.0%
!! AGGGAGTATACAGTAATTTT+GGG - Chr1:16809674-16809693 MsG0180001172.01.T01:intron 30.0%
!! CATTTCTGAAACTTGAAGTT+TGG + Chr1:16817430-16817449 None:intergenic 30.0%
!! CATTTTTGATGACCTGTAAA+AGG + Chr1:16813106-16813125 None:intergenic 30.0%
!! TCTTTTAGAGAAACCATCTT+AGG + Chr1:16817283-16817302 None:intergenic 30.0%
!! TGAACTCTCTAAAATACCAA+AGG + Chr1:16811276-16811295 None:intergenic 30.0%
!! TGTCACAAGGATTTTAATGA+AGG - Chr1:16808666-16808685 MsG0180001172.01.T01:intron 30.0%
!! TTTCATCATTGATTTAGGCT+CGG - Chr1:16813900-16813919 MsG0180001172.01.T01:intron 30.0%
!! TTTTGATAGCATAGCATGTA+AGG + Chr1:16810504-16810523 None:intergenic 30.0%
!!! AAAGTTATTTTTTGGTGCCT+TGG - Chr1:16813933-16813952 MsG0180001172.01.T01:intron 30.0%
!!! ATTTTGATTGCTTGATGACT+TGG - Chr1:16815534-16815553 MsG0180001172.01.T01:intron 30.0%
!!! CCTGGTTTTGCTTATAATTA+AGG + Chr1:16809533-16809552 None:intergenic 30.0%
!!! CCTTGTTTTATTGTTTTAGG+AGG - Chr1:16812187-16812206 MsG0180001172.01.T01:intron 30.0%
!!! TCCCCTTGTTTTATTGTTTT+AGG - Chr1:16812184-16812203 MsG0180001172.01.T01:intron 30.0%
!!! TGTTTTGACTGAAGTAAAGA+AGG - Chr1:16811296-16811315 MsG0180001172.01.T01:intron 30.0%
!!! TGTTTTGATGATTGTGTGAA+AGG - Chr1:16807851-16807870 MsG0180001172.01.T01:intron 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + Chr1:16807786-16807805 None:intergenic 30.0%
!!! TTGGTTTTGTAGGTATTGTA+TGG - Chr1:16816056-16816075 MsG0180001172.01.T01:intron 30.0%
!!! TTTTGAAATCAGGAAAACGA+CGG + Chr1:16806670-16806689 None:intergenic 30.0%
AAAATGCATATGAATGCTGC+TGG + Chr1:16810907-16810926 None:intergenic 35.0%
AAAATGCTGGTGGTTAATAG+TGG - Chr1:16808207-16808226 MsG0180001172.01.T01:intron 35.0%
AAACCTGATGAGAAGTAGAT+AGG + Chr1:16813560-16813579 None:intergenic 35.0%
AAATGGAGAACTTCAGTAAG+CGG + Chr1:16816539-16816558 None:intergenic 35.0%
AAATTACTGTATACTCCCTC+CGG + Chr1:16809673-16809692 None:intergenic 35.0%
AAATTTCCTGACAGCACAAA+AGG - Chr1:16814507-16814526 MsG0180001172.01.T01:intron 35.0%
AACAATTGGCAGAAAAATGC+TGG - Chr1:16808194-16808213 MsG0180001172.01.T01:intron 35.0%
AACACGGAATTAATGTACCT+TGG - Chr1:16813849-16813868 MsG0180001172.01.T01:intron 35.0%
AACCATGAAGTGAACTACTT+AGG - Chr1:16813386-16813405 MsG0180001172.01.T01:intron 35.0%
AAGACAATCATGTTCGATTG+CGG - Chr1:16806620-16806639 MsG0180001172.01.T01:three_prime_UTR 35.0%
AAGTGAACTACTTAGGATTC+TGG - Chr1:16813393-16813412 MsG0180001172.01.T01:intron 35.0%
AATTGAGATGCTAATGTCAG+AGG + Chr1:16808906-16808925 None:intergenic 35.0%
AATTGCATGTGAAGATGACT+GGG + Chr1:16814314-16814333 None:intergenic 35.0%
AATTTCCTGACAGCACAAAA+GGG - Chr1:16814508-16814527 MsG0180001172.01.T01:intron 35.0%
AATTTCGTTGTTTGCAGGAT+GGG + Chr1:16817338-16817357 None:intergenic 35.0%
ACAAGAAAAGAAATGGGGAA+GGG + Chr1:16815810-16815829 None:intergenic 35.0%
ACCAAACTACTAATTGACTG+TGG + Chr1:16808833-16808852 None:intergenic 35.0%
ACCCTAATCTTGAATGATAC+TGG + Chr1:16809299-16809318 None:intergenic 35.0%
ACGTATCACAAGATGCTTAT+TGG - Chr1:16814090-16814109 MsG0180001172.01.T01:intron 35.0%
ACTAGATGATATGGAAATCG+AGG + Chr1:16809769-16809788 None:intergenic 35.0%
AGAATGAAATGAACGAAGGA+AGG + Chr1:16806500-16806519 None:intergenic 35.0%
AGGAGTAATAATGCTAAGGT+TGG + Chr1:16809925-16809944 None:intergenic 35.0%
AGTAGTTTGGGAAAGAATTG+GGG + Chr1:16811604-16811623 None:intergenic 35.0%
ATAAACTTGGGTAGTTACAG+AGG + Chr1:16811683-16811702 None:intergenic 35.0%
ATAGTACAAACTGACATGGA+AGG - Chr1:16817019-16817038 MsG0180001172.01.T01:intron 35.0%
ATCACAAGATGCTTATTGGT+TGG - Chr1:16814094-16814113 MsG0180001172.01.T01:intron 35.0%
ATCAGGAATCAGACATATGA+TGG + Chr1:16809793-16809812 None:intergenic 35.0%
ATCCTAAGTAGTTCACTTCA+TGG + Chr1:16813391-16813410 None:intergenic 35.0%
ATGGAGGAGTAATAATGCTA+AGG + Chr1:16809929-16809948 None:intergenic 35.0%
ATGGTTCATTAATCCAACCT+TGG + Chr1:16813372-16813391 None:intergenic 35.0%
ATTACTGAGTGCATGAAGAA+AGG - Chr1:16808491-16808510 MsG0180001172.01.T01:CDS 35.0%
ATTCCTAAACGCTCTTTCAA+AGG - Chr1:16812887-16812906 MsG0180001172.01.T01:intron 35.0%
CAACAGTGAAACTGAAAACA+AGG + Chr1:16811835-16811854 None:intergenic 35.0%
CAATACCTACAAAACCAACA+TGG + Chr1:16816054-16816073 None:intergenic 35.0%
CAATATCTAAATGGCTGAAG+TGG + Chr1:16816745-16816764 None:intergenic 35.0%
CATATTATGCAGGACATGTA+AGG - Chr1:16809032-16809051 MsG0180001172.01.T01:intron 35.0%
CCAGTGTTTCACAATATTGA+AGG + Chr1:16809711-16809730 None:intergenic 35.0%
CCCAAATTTCCAGACTAATA+AGG + Chr1:16815657-16815676 None:intergenic 35.0%
CCTTCAATATTGTGAAACAC+TGG - Chr1:16809708-16809727 MsG0180001172.01.T01:intron 35.0%
CGTTTGCTTACAATAAAGTC+CGG - Chr1:16809651-16809670 MsG0180001172.01.T01:intron 35.0%
CTAGATGATATGGAAATCGA+GGG + Chr1:16809768-16809787 None:intergenic 35.0%
CTAGTAGTTTGGGAAAGAAT+TGG + Chr1:16811606-16811625 None:intergenic 35.0%
CTAGTCTAAGTTCATGAGTT+TGG - Chr1:16816339-16816358 MsG0180001172.01.T01:intron 35.0%
CTAGTTACAAGCCCATATAA+TGG - Chr1:16812108-16812127 MsG0180001172.01.T01:intron 35.0%
CTCCAATGTTTAAGCAATAG+AGG + Chr1:16816458-16816477 None:intergenic 35.0%
CTTACAATTTCGTTGTTTGC+AGG + Chr1:16817343-16817362 None:intergenic 35.0%
CTTACTTCACTGAAGTTTGT+GGG - Chr1:16806863-16806882 MsG0180001172.01.T01:three_prime_UTR 35.0%
CTTATTCCAACATTTGCTCT+TGG - Chr1:16812775-16812794 MsG0180001172.01.T01:intron 35.0%
CTTCCAGACTATCCATTATA+TGG + Chr1:16812123-16812142 None:intergenic 35.0%
CTTTGATGTTGGAAGACTTT+CGG - Chr1:16808417-16808436 MsG0180001172.01.T01:intron 35.0%
GAATTGTGTTCTGATGCTAA+AGG - Chr1:16813710-16813729 MsG0180001172.01.T01:intron 35.0%
GATGATTGCATCACTTCATT+AGG - Chr1:16814694-16814713 MsG0180001172.01.T01:intron 35.0%
GGAGTAATAATGCTAAGGTT+GGG + Chr1:16809924-16809943 None:intergenic 35.0%
GGCGAAGGATTTATATGTTA+TGG - Chr1:16814588-16814607 MsG0180001172.01.T01:intron 35.0%
GTAATTGTAGATCACTGTAC+TGG + Chr1:16812683-16812702 None:intergenic 35.0%
GTAGGAGTGAAAATATGGTT+TGG + Chr1:16810686-16810705 None:intergenic 35.0%
GTCATGTAGGAGTGAAAATA+TGG + Chr1:16810691-16810710 None:intergenic 35.0%
GTCCAGTATCATTCAAGATT+AGG - Chr1:16809294-16809313 MsG0180001172.01.T01:CDS 35.0%
GTCTTGTAACACTGCTTAAA+GGG + Chr1:16809417-16809436 None:intergenic 35.0%
GTGTACTTCTCGTTATTTGT+TGG - Chr1:16813992-16814011 MsG0180001172.01.T01:intron 35.0%
TAAACTTGGGTAGTTACAGA+GGG + Chr1:16811682-16811701 None:intergenic 35.0%
TAAGCTATCATGTAGAGCTT+AGG - Chr1:16807336-16807355 MsG0180001172.01.T01:CDS 35.0%
TAATCCAACCTTGGTCATAA+TGG + Chr1:16813363-16813382 None:intergenic 35.0%
TACAAATGCTTGAGTAGATC+TGG - Chr1:16814794-16814813 MsG0180001172.01.T01:intron 35.0%
TACACCGAAACTTTGCTTTA+GGG - Chr1:16813666-16813685 MsG0180001172.01.T01:intron 35.0%
TACTCAAATTAGGCCATGTT+TGG - Chr1:16807225-16807244 MsG0180001172.01.T01:CDS 35.0%
TATAACTAAGGACAGGTCAA+TGG + Chr1:16811242-16811261 None:intergenic 35.0%
TATAGATGACATGCCTAATG+AGG + Chr1:16814764-16814783 None:intergenic 35.0%
TCAGAAGTCACATAAAACCA+AGG + Chr1:16813953-16813972 None:intergenic 35.0%
TCATCTTCAACTTGAAGTTC+AGG + Chr1:16817502-16817521 None:intergenic 35.0%
TCCAACAAAATGCACCAAAT+AGG + Chr1:16811352-16811371 None:intergenic 35.0%
TCTTCAATCCATTATGACCA+AGG - Chr1:16813352-16813371 MsG0180001172.01.T01:intron 35.0%
TGAAAATACATACGGCTTTG+AGG + Chr1:16811119-16811138 None:intergenic 35.0%
TGACTGAAGTAAAGAAGGAA+TGG - Chr1:16811301-16811320 MsG0180001172.01.T01:intron 35.0%
TGCATGAAGAAAGGTAACAT+AGG - Chr1:16808500-16808519 MsG0180001172.01.T01:CDS 35.0%
TGCTTAAACATTGGAGTACA+GGG - Chr1:16816462-16816481 MsG0180001172.01.T01:intron 35.0%
TGCTTATAATTAAGGCCAGA+GGG + Chr1:16809525-16809544 None:intergenic 35.0%
TGGTGGCAACAATATCTAAA+TGG + Chr1:16816754-16816773 None:intergenic 35.0%
TGTGAATATGAAAGGTTGCA+AGG - Chr1:16817845-16817864 MsG0180001172.01.T01:intron 35.0%
TTAGATAAGACATGTCACTG+AGG - Chr1:16808563-16808582 MsG0180001172.01.T01:intron 35.0%
TTCCTAAACGCTCTTTCAAA+GGG - Chr1:16812888-16812907 MsG0180001172.01.T01:intron 35.0%
TTCTGTGCAAACAATTCATC+AGG - Chr1:16816208-16816227 MsG0180001172.01.T01:CDS 35.0%
TTGCTTAAACATTGGAGTAC+AGG - Chr1:16816461-16816480 MsG0180001172.01.T01:intron 35.0%
TTGCTTATAATTAAGGCCAG+AGG + Chr1:16809526-16809545 None:intergenic 35.0%
TTTATCAGGTGAAATCAACG+CGG + Chr1:16807065-16807084 None:intergenic 35.0%
TTTCTCGGACCAAATAAACT+TGG + Chr1:16811762-16811781 None:intergenic 35.0%
! AAAGGAGACAAAGCTTTTGT+TGG + Chr1:16808401-16808420 None:intergenic 35.0%
! AAGGAGACAAAGCTTTTGTT+GGG + Chr1:16808400-16808419 None:intergenic 35.0%
! AGAGCGTTTAGGAATAAGAA+GGG + Chr1:16812882-16812901 None:intergenic 35.0%
! AGTCTTGTAACACTGCTTAA+AGG + Chr1:16809418-16809437 None:intergenic 35.0%
! AGTTTGCTTTGGTTGTACTT+TGG + Chr1:16817826-16817845 None:intergenic 35.0%
! ATAGAAAACTTGAGCGCTTT+TGG - Chr1:16816572-16816591 MsG0180001172.01.T01:intron 35.0%
! CAATCTTTGAGGGACTAATT+TGG - Chr1:16816898-16816917 MsG0180001172.01.T01:intron 35.0%
! CATTTGTGCGTATCTTTTCT+GGG - Chr1:16812971-16812990 MsG0180001172.01.T01:intron 35.0%
! CCCCTAACTAGTTAGATTTT+TGG - Chr1:16810469-16810488 MsG0180001172.01.T01:CDS 35.0%
! CTGTCCTTAATGTTTTATGC+TGG - Chr1:16813005-16813024 MsG0180001172.01.T01:intron 35.0%
! CTTATTCCTTTTCAGTCACA+TGG - Chr1:16809363-16809382 MsG0180001172.01.T01:CDS 35.0%
! GAAACGAGGAAAAGGAATTT+TGG - Chr1:16812083-16812102 MsG0180001172.01.T01:intron 35.0%
! GACATCTCTTTTCTGCTATT+GGG - Chr1:16811551-16811570 MsG0180001172.01.T01:intron 35.0%
! GAGGGAAACAGTTAACATTT+TGG - Chr1:16817733-16817752 MsG0180001172.01.T01:CDS 35.0%
! GCAGCATTCATATGCATTTT+AGG - Chr1:16810907-16810926 MsG0180001172.01.T01:intron 35.0%
! GCTTAAATGTGTCATTGTTG+TGG - Chr1:16815686-16815705 MsG0180001172.01.T01:intron 35.0%
! GTAGGAACTACGTATTTTGT+TGG - Chr1:16813502-16813521 MsG0180001172.01.T01:intron 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG + Chr1:16807656-16807675 None:intergenic 35.0%
! GTATTTTGTTGGATGACTAC+TGG - Chr1:16813513-16813532 MsG0180001172.01.T01:CDS 35.0%
! TAACTGATTCTCATTCCATC+TGG + Chr1:16817924-16817943 None:intergenic 35.0%
! TAATGGATAGTCTGGAAGTT+TGG - Chr1:16812125-16812144 MsG0180001172.01.T01:intron 35.0%
! TCAACACTCGTTCTTTTATC+AGG + Chr1:16807079-16807098 None:intergenic 35.0%
! TGACATCTCTTTTCTGCTAT+TGG - Chr1:16811550-16811569 MsG0180001172.01.T01:intron 35.0%
! TGTGCAGAGTATTAATTGGA+GGG + Chr1:16807652-16807671 None:intergenic 35.0%
! TTACAAGAGAGGAAGTATGT+CGG - Chr1:16814735-16814754 MsG0180001172.01.T01:intron 35.0%
!! AAAGAGTCTTGTTGAAAGTC+TGG - Chr1:16809237-16809256 MsG0180001172.01.T01:intron 35.0%
!! AAGAGCGTTTAGGAATAAGA+AGG + Chr1:16812883-16812902 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + Chr1:16807552-16807571 None:intergenic 35.0%
!! ACTTGAAGTTTTCAAGCACT+GGG - Chr1:16815307-16815326 MsG0180001172.01.T01:intron 35.0%
!! AGGAAAGTATCTCGTAGAAA+AGG - Chr1:16808132-16808151 MsG0180001172.01.T01:intron 35.0%
!! ATCTTTTGGAGATCTAGTCA+GGG - Chr1:16816959-16816978 MsG0180001172.01.T01:intron 35.0%
!! CAATCTTTAACGGACTAATC+TGG + Chr1:16816774-16816793 None:intergenic 35.0%
!! CACTGCTTGTTGTTATAAGA+AGG - Chr1:16810992-16811011 MsG0180001172.01.T01:intron 35.0%
!! GAGGGAGTATACAGTAATTT+TGG - Chr1:16809673-16809692 MsG0180001172.01.T01:intron 35.0%
!! GCAGTTTTTGATGAAAGTGT+CGG + Chr1:16817401-16817420 None:intergenic 35.0%
!! GGAAAGTATCTCGTAGAAAA+GGG - Chr1:16808133-16808152 MsG0180001172.01.T01:intron 35.0%
!! GTCAGTAATGTTTTTGCTAG+TGG - Chr1:16807412-16807431 MsG0180001172.01.T01:CDS 35.0%
!! GTGAATACTAGAGTGTTGAA+AGG + Chr1:16806974-16806993 None:intergenic 35.0%
!! GTTCATAAATGTGTTTCTGG+AGG - Chr1:16812742-16812761 MsG0180001172.01.T01:intron 35.0%
!! GTTCTAGAAGCATCACAAAA+TGG + Chr1:16815625-16815644 None:intergenic 35.0%
!! TTTGTGATGCTTCTAGAACA+GGG - Chr1:16815626-16815645 MsG0180001172.01.T01:CDS 35.0%
!! TTTTGTAGGTATTGTATGGC+TGG - Chr1:16816060-16816079 MsG0180001172.01.T01:intron 35.0%
!! TTTTGTAGTGTTTTGCTGTC+TGG - Chr1:16818034-16818053 MsG0180001172.01.T01:CDS 35.0%
!!! GAGGAGTCCTTGTTTTAATT+TGG - Chr1:16812519-16812538 MsG0180001172.01.T01:intron 35.0%
!!! GCGACAAGATTTTTTTCTGA+AGG + Chr1:16815335-16815354 None:intergenic 35.0%
!!! TACATCGATTTTCTTTGACC+TGG + Chr1:16809551-16809570 None:intergenic 35.0%
!!! TCCTATTTGGTGCATTTTGT+TGG - Chr1:16811348-16811367 MsG0180001172.01.T01:intron 35.0%
!!! TTTTGTGATGCTTCTAGAAC+AGG - Chr1:16815625-16815644 MsG0180001172.01.T01:CDS 35.0%
AAATCTTGGCACTAGCACAT+AGG + Chr1:16812313-16812332 None:intergenic 40.0%
AACATGGCAGTCGCATAAAA+TGG + Chr1:16807029-16807048 None:intergenic 40.0%
AACCCCCTAAAGCAAAGTTT+CGG + Chr1:16813673-16813692 None:intergenic 40.0%
AAGCATGTTATGCTAGTGCA+TGG - Chr1:16817250-16817269 MsG0180001172.01.T01:intron 40.0%
AATTGGCAGAAAAATGCTGG+TGG - Chr1:16808197-16808216 MsG0180001172.01.T01:intron 40.0%
ACACCGAAACTTTGCTTTAG+GGG - Chr1:16813667-16813686 MsG0180001172.01.T01:intron 40.0%
ACACTGCTTAAAGGGAACAT+TGG + Chr1:16809409-16809428 None:intergenic 40.0%
ACCTAAAACGCTAGAGTCAA+TGG + Chr1:16812023-16812042 None:intergenic 40.0%
ACGCACATCTATCTGAGTAT+CGG + Chr1:16816139-16816158 None:intergenic 40.0%
ACGTATCGTAGTTGCATAAG+TGG + Chr1:16811067-16811086 None:intergenic 40.0%
AGAGTTGAGAAACGAGGAAA+AGG - Chr1:16812075-16812094 MsG0180001172.01.T01:intron 40.0%
AGATGAATGTCCTCCACAAT+TGG - Chr1:16815454-16815473 MsG0180001172.01.T01:intron 40.0%
AGGAATGGATGCTAAAGGAA+TGG - Chr1:16813730-16813749 MsG0180001172.01.T01:intron 40.0%
AGGGAAAAGACAAAGGGAAT+GGG + Chr1:16815948-16815967 None:intergenic 40.0%
AGGGTGGTAAACTAGTAGTT+TGG + Chr1:16811617-16811636 None:intergenic 40.0%
ATAATAGAAGAGAGGAGAGG+AGG + Chr1:16811637-16811656 None:intergenic 40.0%
ATAGGCGTCACATATAACCA+AGG + Chr1:16813869-16813888 None:intergenic 40.0%
ATCGGGATCTGTATCAACTT+TGG + Chr1:16816121-16816140 None:intergenic 40.0%
ATGTATTCATGTTCCAGGTC+AGG - Chr1:16814979-16814998 MsG0180001172.01.T01:intron 40.0%
ATGTGATACACCAATTGTGG+AGG + Chr1:16815467-16815486 None:intergenic 40.0%
ATGTTGGACGAAAAGAAGCA+TGG - Chr1:16817604-16817623 MsG0180001172.01.T01:intron 40.0%
ATTGTATGGCTGGAACTGTA+GGG - Chr1:16816070-16816089 MsG0180001172.01.T01:intron 40.0%
ATTTCCTGACAGCACAAAAG+GGG - Chr1:16814509-16814528 MsG0180001172.01.T01:intron 40.0%
CAACAGCCTTTACAGTTAGT+TGG - Chr1:16814433-16814452 MsG0180001172.01.T01:CDS 40.0%
CAACTAGTGGGAAAAATGCT+TGG + Chr1:16814263-16814282 None:intergenic 40.0%
CAATCCATTATGACCAAGGT+TGG - Chr1:16813356-16813375 MsG0180001172.01.T01:intron 40.0%
CAATTTCGTTGTTTGCAGGA+TGG + Chr1:16817339-16817358 None:intergenic 40.0%
CACAGTCTGCTTCAAATCTA+CGG + Chr1:16808984-16809003 None:intergenic 40.0%
CACTAGCATAACATGCTTTG+GGG + Chr1:16817248-16817267 None:intergenic 40.0%
CAGATACGTGCATATTATGC+AGG - Chr1:16809022-16809041 MsG0180001172.01.T01:intron 40.0%
CAGTGGACCAGTTTATATGA+CGG - Chr1:16806888-16806907 MsG0180001172.01.T01:three_prime_UTR 40.0%
CATAATATGCACGTATCTGC+AGG + Chr1:16809021-16809040 None:intergenic 40.0%
CATGCTATAATAGCTGAGAG+CGG - Chr1:16815124-16815143 MsG0180001172.01.T01:intron 40.0%
CCACAAACTTCAGTGAAGTA+AGG + Chr1:16806865-16806884 None:intergenic 40.0%
CCTTACTTCACTGAAGTTTG+TGG - Chr1:16806862-16806881 MsG0180001172.01.T01:three_prime_UTR 40.0%
CGAAAGTCTTCCAACATCAA+AGG + Chr1:16808419-16808438 None:intergenic 40.0%
CGGAACTCACACTTAAAACA+TGG + Chr1:16807045-16807064 None:intergenic 40.0%
CTACACCGAAACTTTGCTTT+AGG - Chr1:16813665-16813684 MsG0180001172.01.T01:intron 40.0%
CTACGGCAATAACTGTTTAC+AGG + Chr1:16808967-16808986 None:intergenic 40.0%
CTCGTTTGACACTGTATGAT+GGG - Chr1:16807125-16807144 MsG0180001172.01.T01:CDS 40.0%
CTGCAGTTCACAAATTTGAG+AGG - Chr1:16815216-16815235 MsG0180001172.01.T01:intron 40.0%
CTGGCAAGTTATTGTTTCCA+CGG - Chr1:16813032-16813051 MsG0180001172.01.T01:intron 40.0%
CTTTCAAAGGGACAACATGA+GGG - Chr1:16812900-16812919 MsG0180001172.01.T01:intron 40.0%
GAAAAGCCACAGACAAATCT+TGG + Chr1:16812327-16812346 None:intergenic 40.0%
GAATATAAATGGGCATACCC+AGG + Chr1:16815362-16815381 None:intergenic 40.0%
GAATTGCATGTGAAGATGAC+TGG + Chr1:16814315-16814334 None:intergenic 40.0%
GACAAGAAAAGAAATGGGGA+AGG + Chr1:16815811-16815830 None:intergenic 40.0%
GACATGTCACTGAGGAATAA+CGG - Chr1:16808571-16808590 MsG0180001172.01.T01:intron 40.0%
GACGCAGAAATGGTTTATAC+AGG - Chr1:16810179-16810198 MsG0180001172.01.T01:intron 40.0%
GAGCTTAGGAGAACAGTTTA+TGG - Chr1:16807350-16807369 MsG0180001172.01.T01:CDS 40.0%
GATTTGAGGAAGGGACATAA+AGG + Chr1:16810662-16810681 None:intergenic 40.0%
GCACTAGCATAACATGCTTT+GGG + Chr1:16817249-16817268 None:intergenic 40.0%
GCATCACTTCATTAGGCATT+AGG - Chr1:16814701-16814720 MsG0180001172.01.T01:intron 40.0%
GCCACAGTCAATTAGTAGTT+TGG - Chr1:16808829-16808848 MsG0180001172.01.T01:intron 40.0%
GCTAAAGGAATGGATGCTAA+AGG - Chr1:16813725-16813744 MsG0180001172.01.T01:intron 40.0%
GCTAGAGTCAATGGCATATT+TGG + Chr1:16812014-16812033 None:intergenic 40.0%
GGATCTGTATCAACTTTGGT+GGG + Chr1:16816117-16816136 None:intergenic 40.0%
GGCGACACTTCAATCTTTAA+CGG + Chr1:16816784-16816803 None:intergenic 40.0%
GGGTGGTAAACTAGTAGTTT+GGG + Chr1:16811616-16811635 None:intergenic 40.0%
GTAGGGCATAAATTAACGTC+AGG - Chr1:16816087-16816106 MsG0180001172.01.T01:intron 40.0%
GTGTTCTGATGCTAAAGGAA+TGG - Chr1:16813715-16813734 MsG0180001172.01.T01:intron 40.0%
GTTCCTATCTACTTCTCATC+AGG - Chr1:16813554-16813573 MsG0180001172.01.T01:intron 40.0%
GTTTCAGAAATGCAGTTCAG+TGG - Chr1:16817438-16817457 MsG0180001172.01.T01:intron 40.0%
TAATAGAAGAGAGGAGAGGA+GGG + Chr1:16811636-16811655 None:intergenic 40.0%
TAGGGAAAAGACAAAGGGAA+TGG + Chr1:16815949-16815968 None:intergenic 40.0%
TATTGTATGGCTGGAACTGT+AGG - Chr1:16816069-16816088 MsG0180001172.01.T01:intron 40.0%
TCTCGTTTGACACTGTATGA+TGG - Chr1:16807124-16807143 MsG0180001172.01.T01:CDS 40.0%
TCTTGTTGAAAGTCTGGAAG+GGG - Chr1:16809243-16809262 MsG0180001172.01.T01:intron 40.0%
TCTTTCAAAGGGACAACATG+AGG - Chr1:16812899-16812918 MsG0180001172.01.T01:intron 40.0%
TGAAATGTTTCCCGAATGTG+CGG - Chr1:16808039-16808058 MsG0180001172.01.T01:intron 40.0%
TGCACCAAATAGGAGCAAAA+TGG + Chr1:16811342-16811361 None:intergenic 40.0%
TGCACTAGCATAACATGCTT+TGG + Chr1:16817250-16817269 None:intergenic 40.0%
TGCTTACAATAAAGTCCGGA+GGG - Chr1:16809655-16809674 MsG0180001172.01.T01:intron 40.0%
TGGCGATGTATCTTGATCTT+GGG + Chr1:16816725-16816744 None:intergenic 40.0%
TTACTTGTATATGCTGCTGC+TGG + Chr1:16816244-16816263 None:intergenic 40.0%
TTGCTTACAATAAAGTCCGG+AGG - Chr1:16809654-16809673 MsG0180001172.01.T01:intron 40.0%
TTGGAGTACAGGGTGAAAAT+AGG - Chr1:16816472-16816491 MsG0180001172.01.T01:intron 40.0%
TTGTCACCATGTGACTGAAA+AGG + Chr1:16809372-16809391 None:intergenic 40.0%
TTGTGGAATTACAACCAAGG+AGG + Chr1:16808337-16808356 None:intergenic 40.0%
TTTCAAAGGGACAACATGAG+GGG - Chr1:16812901-16812920 MsG0180001172.01.T01:intron 40.0%
TTTGAATTAGCTAGCATCCC+TGG - Chr1:16813577-16813596 MsG0180001172.01.T01:intron 40.0%
! AGCTTTGTCTCCTTTGATGT+TGG - Chr1:16808406-16808425 MsG0180001172.01.T01:intron 40.0%
! CAAGCATTTTTCCCACTAGT+TGG - Chr1:16814261-16814280 MsG0180001172.01.T01:intron 40.0%
! CATTCAGCTTTGACCTTCTA+GGG + Chr1:16814674-16814693 None:intergenic 40.0%
! CTAAAGCAAAGTTTCGGTGT+AGG + Chr1:16813667-16813686 None:intergenic 40.0%
! CTTCAATTTTTCACCTGACC+TGG + Chr1:16814995-16815014 None:intergenic 40.0%
! GCATTTGTGCGTATCTTTTC+TGG - Chr1:16812970-16812989 MsG0180001172.01.T01:intron 40.0%
! GTCTTGTTGAAAGTCTGGAA+GGG - Chr1:16809242-16809261 MsG0180001172.01.T01:intron 40.0%
! GTGTGCAGAGTATTAATTGG+AGG + Chr1:16807653-16807672 None:intergenic 40.0%
! TGAATTAACAGAGCACCAGA+TGG - Chr1:16817906-16817925 MsG0180001172.01.T01:CDS 40.0%
! TGTAACAACGGCGTATTTTG+AGG + Chr1:16816815-16816834 None:intergenic 40.0%
! TGTTGGACGAAAAGAAGCAT+GGG - Chr1:16817605-16817624 MsG0180001172.01.T01:intron 40.0%
! TTGCAAGAGGTTGATCCATT+AGG - Chr1:16809336-16809355 MsG0180001172.01.T01:CDS 40.0%
! TTTTTCCCACTAGTTGGAAC+TGG - Chr1:16814267-16814286 MsG0180001172.01.T01:intron 40.0%
!! AAAAATCTTGTCGCTTTGCC+TGG - Chr1:16815341-16815360 MsG0180001172.01.T01:intron 40.0%
!! AAAATCTTGTCGCTTTGCCT+GGG - Chr1:16815342-16815361 MsG0180001172.01.T01:intron 40.0%
!! AAAGCACCATAAGCATTGAC+TGG + Chr1:16808298-16808317 None:intergenic 40.0%
!! AGCCCATATAATGGATAGTC+TGG - Chr1:16812117-16812136 MsG0180001172.01.T01:intron 40.0%
!! AGTCTGGAAATTTGGGGTTT+TGG - Chr1:16815661-16815680 MsG0180001172.01.T01:intron 40.0%
!! AGTCTTGTTGAAAGTCTGGA+AGG - Chr1:16809241-16809260 MsG0180001172.01.T01:intron 40.0%
!! AGTTCATGAGTTTGGTGCAA+TGG - Chr1:16816347-16816366 MsG0180001172.01.T01:intron 40.0%
!! ATGGTTTGGTGATTTGAGGA+AGG + Chr1:16810672-16810691 None:intergenic 40.0%
!! CACTGACTCTAAAGGGATAA+TGG - Chr1:16817204-16817223 MsG0180001172.01.T01:intron 40.0%
!! CACTTGAAGTTTTCAAGCAC+TGG - Chr1:16815306-16815325 MsG0180001172.01.T01:intron 40.0%
!! CATAAATGTGTTTCTGGAGG+AGG - Chr1:16812745-16812764 MsG0180001172.01.T01:intron 40.0%
!! CATTGTAGAGCTCTGAGTTA+TGG - Chr1:16817880-16817899 MsG0180001172.01.T01:intron 40.0%
!! CTCCCACCCTTTTATTTACA+AGG - Chr1:16816176-16816195 MsG0180001172.01.T01:CDS 40.0%
!! GTAAAGAGGTATCAGTTTCC+TGG + Chr1:16816305-16816324 None:intergenic 40.0%
!! GTCTGGAAATTTGGGGTTTT+GGG - Chr1:16815662-16815681 MsG0180001172.01.T01:intron 40.0%
!! GTTCATGAGTTTGGTGCAAT+GGG - Chr1:16816348-16816367 MsG0180001172.01.T01:intron 40.0%
!! TCTGGAAATTTGGGGTTTTG+GGG - Chr1:16815663-16815682 MsG0180001172.01.T01:intron 40.0%
!! TCTTTAACGGACTAATCTGG+TGG + Chr1:16816771-16816790 None:intergenic 40.0%
!! TCTTTTGGAGATCTAGTCAG+GGG - Chr1:16816960-16816979 MsG0180001172.01.T01:intron 40.0%
!! TGGTGTGTGTTTTAGACTGT+TGG - Chr1:16808849-16808868 MsG0180001172.01.T01:intron 40.0%
!! TGGTTTGGTGATTTGAGGAA+GGG + Chr1:16810671-16810690 None:intergenic 40.0%
!! TTGTGATGCTTCTAGAACAG+GGG - Chr1:16815627-16815646 MsG0180001172.01.T01:CDS 40.0%
!!! ACTTTTCAAGTGCCTAGTGA+AGG + Chr1:16815597-16815616 None:intergenic 40.0%
!!! CAGTTCCATGTTGGTTTTGT+AGG - Chr1:16816046-16816065 MsG0180001172.01.T01:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - Chr1:16807791-16807810 MsG0180001172.01.T01:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + Chr1:16807810-16807791 None:intergenic 40.0%
!!! GCAATCCAAGCTCTAGTTTT+AGG - Chr1:16806464-16806483 MsG0180001172.01.T01:three_prime_UTR 40.0%
!!! GTTTTTGATGAAAGTGTCGG+AGG + Chr1:16817398-16817417 None:intergenic 40.0%
!!! TGTGCCATTTTGCTCCTATT+TGG - Chr1:16811335-16811354 MsG0180001172.01.T01:intron 40.0%
AAAAGTGGGAGACGCAGAAA+TGG - Chr1:16810169-16810188 MsG0180001172.01.T01:intron 45.0%
AAGACAAAGGGAATGGGGAA+AGG + Chr1:16815942-16815961 None:intergenic 45.0%
AATCCACCAAGTATCATCCC+AGG + Chr1:16815284-16815303 None:intergenic 45.0%
AATGCTAAGGTTGGGCTATC+AGG + Chr1:16809916-16809935 None:intergenic 45.0%
ACAAGCAGTGAGTGCAAAAC+AGG + Chr1:16810982-16811001 None:intergenic 45.0%
ACAATGCATGCATTCCACCA+AGG + Chr1:16807468-16807487 None:intergenic 45.0%
ACTGAAGTTTGTGGGTACAG+TGG - Chr1:16806871-16806890 MsG0180001172.01.T01:three_prime_UTR 45.0%
AGACAAAGGGAATGGGGAAA+GGG + Chr1:16815941-16815960 None:intergenic 45.0%
AGATGACATGCCTAATGAGG+TGG + Chr1:16814761-16814780 None:intergenic 45.0%
AGATGCTAATGTCAGAGGTG+TGG + Chr1:16808901-16808920 None:intergenic 45.0%
AGCTAATCCAAACACACCCT+TGG - Chr1:16807448-16807467 MsG0180001172.01.T01:intron 45.0%
AGGGGCTTTCCTTATTAGTC+TGG - Chr1:16815645-16815664 MsG0180001172.01.T01:intron 45.0%
AGGTCTATGTTAGATGCTCC+TGG - Chr1:16815236-16815255 MsG0180001172.01.T01:intron 45.0%
ATAGTAAGTGATGCAGGCGA+AGG - Chr1:16814573-16814592 MsG0180001172.01.T01:intron 45.0%
ATCAGTTCAGTCTGTGACGT+GGG + Chr1:16809872-16809891 None:intergenic 45.0%
ATCCACCAGTTCCAACTAGT+GGG + Chr1:16814275-16814294 None:intergenic 45.0%
ATGACACCAGATAGACACCT+AGG - Chr1:16810212-16810231 MsG0180001172.01.T01:intron 45.0%
ATGGCAGTCGCATAAAATGG+TGG + Chr1:16807026-16807045 None:intergenic 45.0%
ATTCAAAATGCGCTCGAGAG+AGG - Chr1:16811088-16811107 MsG0180001172.01.T01:CDS 45.0%
ATTTGCTCTTGGAAGAGCTC+AGG - Chr1:16812786-16812805 MsG0180001172.01.T01:intron 45.0%
CAATAAAACAAGGGGACTGC+AGG + Chr1:16812180-16812199 None:intergenic 45.0%
CAATGCATGCATTCCACCAA+GGG + Chr1:16807467-16807486 None:intergenic 45.0%
CACAAGAATGCTCGAACACA+AGG + Chr1:16814392-16814411 None:intergenic 45.0%
CCTAGAAGGTCAAAGCTGAA+TGG - Chr1:16814672-16814691 MsG0180001172.01.T01:intron 45.0%
CGCACATCTATCTGAGTATC+GGG + Chr1:16816138-16816157 None:intergenic 45.0%
CTAGTGCCAAGATTTGTCTG+TGG - Chr1:16812318-16812337 MsG0180001172.01.T01:intron 45.0%
CTTGTGTTCGAGCATTCTTG+TGG - Chr1:16814390-16814409 MsG0180001172.01.T01:CDS 45.0%
GAAGAGCTTCAATAGCTCAG+TGG + Chr1:16809839-16809858 None:intergenic 45.0%
GAAGATGAAAGAGCAGCAGA+TGG - Chr1:16817514-16817533 MsG0180001172.01.T01:intron 45.0%
GAAGTGATCTCATAGCCACT+TGG + Chr1:16810713-16810732 None:intergenic 45.0%
GAGGCTTCTGCATTTACGTA+CGG + Chr1:16817379-16817398 None:intergenic 45.0%
GCTCTTCCAAGAGCAAATGT+TGG + Chr1:16812784-16812803 None:intergenic 45.0%
GCTGTCAATAGTACCCTAGA+AGG - Chr1:16814658-16814677 MsG0180001172.01.T01:intron 45.0%
GCTGTTCCAGTCAATGCTTA+TGG - Chr1:16808289-16808308 MsG0180001172.01.T01:intron 45.0%
GGACCAGTTTATATGACGGT+GGG - Chr1:16806892-16806911 MsG0180001172.01.T01:three_prime_UTR 45.0%
GGATAGTCTGGAAGTTTGGT+TGG - Chr1:16812129-16812148 MsG0180001172.01.T01:intron 45.0%
GGCACAAGCATTAGCTGAAA+TGG + Chr1:16816518-16816537 None:intergenic 45.0%
GGGAAAAGACAAAGGGAATG+GGG + Chr1:16815947-16815966 None:intergenic 45.0%
GGGATCTGTATCAACTTTGG+TGG + Chr1:16816118-16816137 None:intergenic 45.0%
GGTGGGAGATAAAATGTACC+TGG + Chr1:16816164-16816183 None:intergenic 45.0%
GTAAAGAAGGAATGGTGCTC+TGG - Chr1:16811309-16811328 MsG0180001172.01.T01:intron 45.0%
GTAGAGAGAGTTGAGAAACG+AGG - Chr1:16812069-16812088 MsG0180001172.01.T01:intron 45.0%
GTGGCGATGTATCTTGATCT+TGG + Chr1:16816726-16816745 None:intergenic 45.0%
TAACTGTTTCCCTCGAGATC+AGG + Chr1:16817727-16817746 None:intergenic 45.0%
TAATCCAAACACACCCTTGG+TGG - Chr1:16807451-16807470 MsG0180001172.01.T01:intron 45.0%
TATCAGTTCAGTCTGTGACG+TGG + Chr1:16809873-16809892 None:intergenic 45.0%
TATGCAGCTACTGTGTCACA+AGG - Chr1:16808653-16808672 MsG0180001172.01.T01:intron 45.0%
TCATAGCCACTTGGTCATGT+AGG + Chr1:16810704-16810723 None:intergenic 45.0%
TGCAGTCACTTGGATCATGT+TGG - Chr1:16806832-16806851 MsG0180001172.01.T01:three_prime_UTR 45.0%
TGCTTCAAAAGAGAGATGCG+CGG + Chr1:16817783-16817802 None:intergenic 45.0%
TGGACCAGTTTATATGACGG+TGG - Chr1:16806891-16806910 MsG0180001172.01.T01:three_prime_UTR 45.0%
TGGCAGTCGCATAAAATGGT+GGG + Chr1:16807025-16807044 None:intergenic 45.0%
TTCAAAATGCGCTCGAGAGA+GGG - Chr1:16811089-16811108 MsG0180001172.01.T01:CDS 45.0%
TTCAAAGGGACAACATGAGG+GGG - Chr1:16812902-16812921 MsG0180001172.01.T01:intron 45.0%
TTCAATAAACGTGCAGGTGC+TGG - Chr1:16806554-16806573 MsG0180001172.01.T01:three_prime_UTR 45.0%
TTCACTCCTACATGACCAAG+TGG - Chr1:16810695-16810714 MsG0180001172.01.T01:intron 45.0%
TTGATGTTGGTGCAGTCACT+TGG - Chr1:16806822-16806841 MsG0180001172.01.T01:three_prime_UTR 45.0%
TTTCCTGACAGCACAAAAGG+GGG - Chr1:16814510-16814529 MsG0180001172.01.T01:intron 45.0%
! AAGAGCAGCAGATGGAGTTT+TGG - Chr1:16817522-16817541 MsG0180001172.01.T01:intron 45.0%
! ACAGCACAAAAGGGGGATTT+TGG - Chr1:16814517-16814536 MsG0180001172.01.T01:intron 45.0%
! AGCACAAAAGGGGGATTTTG+GGG - Chr1:16814519-16814538 MsG0180001172.01.T01:intron 45.0%
! ATGTTTAAGCACTGCCTCCT+TGG - Chr1:16808320-16808339 MsG0180001172.01.T01:intron 45.0%
! CACCGAAACTTTGCTTTAGG+GGG - Chr1:16813668-16813687 MsG0180001172.01.T01:intron 45.0%
! CAGCACAAAAGGGGGATTTT+GGG - Chr1:16814518-16814537 MsG0180001172.01.T01:intron 45.0%
! CCATTCAGCTTTGACCTTCT+AGG + Chr1:16814675-16814694 None:intergenic 45.0%
! GGAAGACTTTCGGAAAGTGT+TGG - Chr1:16808427-16808446 MsG0180001172.01.T01:intron 45.0%
! GGGTAACTTAGTCGACTTTG+TGG - Chr1:16814610-16814629 MsG0180001172.01.T01:intron 45.0%
! GTTGGACGAAAAGAAGCATG+GGG - Chr1:16817606-16817625 MsG0180001172.01.T01:intron 45.0%
!! AAAGTGTTGGTTGATCGTCG+GGG - Chr1:16808440-16808459 MsG0180001172.01.T01:intron 45.0%
!! AGATTGAAGTGTCGCCGTAT+CGG - Chr1:16816788-16816807 MsG0180001172.01.T01:intron 45.0%
!! AGCAGATGGAGTTTTGGTCA+TGG - Chr1:16817528-16817547 MsG0180001172.01.T01:intron 45.0%
!! AGTCCTCACACTGACTCTAA+AGG - Chr1:16817196-16817215 MsG0180001172.01.T01:intron 45.0%
!! AGTGTCAAACGAGAAGTGTC+AGG + Chr1:16807118-16807137 None:intergenic 45.0%
!! ATCCCTTTAGAGTCAGTGTG+AGG + Chr1:16817202-16817221 None:intergenic 45.0%
!! ATGTGTTTCTGGAGGAGGAA+AGG - Chr1:16812750-16812769 MsG0180001172.01.T01:intron 45.0%
!! CTGGAAATTTGGGGTTTTGG+GGG - Chr1:16815664-16815683 MsG0180001172.01.T01:intron 45.0%
!! GAAAGTGTTGGTTGATCGTC+GGG - Chr1:16808439-16808458 MsG0180001172.01.T01:intron 45.0%
!! GATGACTTGGTACAGTTTGC+TGG - Chr1:16815547-16815566 MsG0180001172.01.T01:intron 45.0%
!! GCGTATTTTGAGGACCGATA+CGG + Chr1:16816805-16816824 None:intergenic 45.0%
!! GGAAAGTGTTGGTTGATCGT+CGG - Chr1:16808438-16808457 MsG0180001172.01.T01:intron 45.0%
!! GTCAGAGGTGTGGTGATTTT+GGG + Chr1:16808891-16808910 None:intergenic 45.0%
!! GTCCCTTTGAAAGAGCGTTT+AGG + Chr1:16812893-16812912 None:intergenic 45.0%
!! GTCCTCACACTGACTCTAAA+GGG - Chr1:16817197-16817216 MsG0180001172.01.T01:intron 45.0%
!! TGGTGATTTTGGGTGGGAAT+CGG + Chr1:16808881-16808900 None:intergenic 45.0%
!! TGTCAGAGGTGTGGTGATTT+TGG + Chr1:16808892-16808911 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - Chr1:16807790-16807809 MsG0180001172.01.T01:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + Chr1:16807809-16807790 None:intergenic 45.0%
!!! CTGGTTTTGTGGCAACATAG+GGG - Chr1:16815566-16815585 MsG0180001172.01.T01:intron 45.0%
!!! GCCATTGACTCTAGCGTTTT+AGG - Chr1:16812019-16812038 MsG0180001172.01.T01:intron 45.0%
!!! GCTGGTTTTGTGGCAACATA+GGG - Chr1:16815565-16815584 MsG0180001172.01.T01:intron 45.0%
!!! GGTACAGTTTGCTGGTTTTG+TGG - Chr1:16815555-16815574 MsG0180001172.01.T01:intron 45.0%
!!! TGCTGGTTTTGTGGCAACAT+AGG - Chr1:16815564-16815583 MsG0180001172.01.T01:intron 45.0%
!! TAACAATTTATAATAAAAAT+AGG + Chr1:16810121-16810140 None:intergenic 5.0%
!! TAATTAAGTAAAATTAAAAT+AGG - Chr1:16813211-16813230 MsG0180001172.01.T01:intron 5.0%
!! TATTATTTAGATATTTAATT+GGG - Chr1:16818145-16818164 MsG0180001172.01.T01:CDS 5.0%
!!! ATTTTTATTATAAATTGTTA+AGG - Chr1:16810121-16810140 MsG0180001172.01.T01:intron 5.0%
AACAGTAGATTGGTGGGACG+TGG - Chr1:16817091-16817110 MsG0180001172.01.T01:intron 50.0%
ACACACACACACATTCCCTC+TGG - Chr1:16809507-16809526 MsG0180001172.01.T01:intron 50.0%
ACATGAGGGGGAGGAAAAGT+AGG - Chr1:16812914-16812933 MsG0180001172.01.T01:intron 50.0%
ACCAAGTATCATCCCAGGAG+TGG + Chr1:16815279-16815298 None:intergenic 50.0%
ACCAGATAGACACCTAGGAG+CGG - Chr1:16810217-16810236 MsG0180001172.01.T01:intron 50.0%
ACTCCTGGGATGATACTTGG+TGG - Chr1:16815278-16815297 MsG0180001172.01.T01:intron 50.0%
AGTATGTCGGCCACCTCATT+AGG - Chr1:16814748-16814767 MsG0180001172.01.T01:intron 50.0%
ATAGGGGACATGCCTTCACT+AGG - Chr1:16815582-16815601 MsG0180001172.01.T01:intron 50.0%
CGACCCACCGTCATATAAAC+TGG + Chr1:16806898-16806917 None:intergenic 50.0%
CTTGGGTAGTTACAGAGGGT+AGG + Chr1:16811678-16811697 None:intergenic 50.0%
GATCAATTTGAGCCGCTCCT+AGG + Chr1:16810232-16810251 None:intergenic 50.0%
GATCCACCAGTTCCAACTAG+TGG + Chr1:16814276-16814295 None:intergenic 50.0%
GCAAAGAGAACACAAGGACC+AGG + Chr1:16815257-16815276 None:intergenic 50.0%
GCATGGAGAGAAGCCTAAGA+TGG - Chr1:16817267-16817286 MsG0180001172.01.T01:intron 50.0%
GCTATAATAGCTGAGAGCGG+AGG - Chr1:16815127-16815146 MsG0180001172.01.T01:intron 50.0%
GGAGTGGCAAAGAGAACACA+AGG + Chr1:16815263-16815282 None:intergenic 50.0%
GTGTTCTCTTTGCCACTCCT+GGG - Chr1:16815264-16815283 MsG0180001172.01.T01:intron 50.0%
GTTAGGGGCAGACCAATGAT+TGG + Chr1:16810457-16810476 None:intergenic 50.0%
GTTGAAAGTCTGGAAGGGGT+AGG - Chr1:16809247-16809266 MsG0180001172.01.T01:intron 50.0%
TACGTCTCACTCTCCTGGTT+TGG - Chr1:16815190-16815209 MsG0180001172.01.T01:intron 50.0%
TCAATCCAGAGCCGCACATT+CGG + Chr1:16808053-16808072 None:intergenic 50.0%
TCAGATAGATGTGCGTTGCC+AGG - Chr1:16816143-16816162 MsG0180001172.01.T01:CDS 50.0%
TCTTGGCACTAGCACATAGG+AGG + Chr1:16812310-16812329 None:intergenic 50.0%
TGAACTGCAGCATCCAAACC+AGG + Chr1:16815206-16815225 None:intergenic 50.0%
TGTGTTCTCTTTGCCACTCC+TGG - Chr1:16815263-16815282 MsG0180001172.01.T01:intron 50.0%
TGTTCTACGTCTCACTCTCC+TGG - Chr1:16815185-16815204 MsG0180001172.01.T01:intron 50.0%
TTCCCACTAGTTGGAACTGG+TGG - Chr1:16814270-16814289 MsG0180001172.01.T01:intron 50.0%
TTTGTGGTGCCTGATCTCGA+GGG - Chr1:16817715-16817734 MsG0180001172.01.T01:intron 50.0%
! AATCCCCCTTTTGTGCTGTC+AGG + Chr1:16814516-16814535 None:intergenic 50.0%
! CATTCCACCAAGGGTGTGTT+TGG + Chr1:16807458-16807477 None:intergenic 50.0%
! CTGGGAGCGCATGAATTTGA+AGG - Chr1:16813532-16813551 MsG0180001172.01.T01:CDS 50.0%
! GCACAAAAGGGGGATTTTGG+GGG - Chr1:16814520-16814539 MsG0180001172.01.T01:intron 50.0%
!! AGAGGTGTGGTGATTTTGGG+TGG + Chr1:16808888-16808907 None:intergenic 50.0%
!! GAGGTGTGGTGATTTTGGGT+GGG + Chr1:16808887-16808906 None:intergenic 50.0%
AAAGGGACAACATGAGGGGG+AGG - Chr1:16812905-16812924 MsG0180001172.01.T01:intron 55.0%
ACTTCCACGTAACGTCGTCC+AGG - Chr1:16811483-16811502 MsG0180001172.01.T01:intron 55.0%
CAATCCAGAGCCGCACATTC+GGG + Chr1:16808052-16808071 None:intergenic 55.0%
CTTCCACGTAACGTCGTCCA+GGG - Chr1:16811484-16811503 MsG0180001172.01.T01:intron 55.0%
CTTTGTGGTGCCTGATCTCG+AGG - Chr1:16817714-16817733 MsG0180001172.01.T01:intron 55.0%
GCCACTCCTGGGATGATACT+TGG - Chr1:16815275-16815294 MsG0180001172.01.T01:intron 55.0%
GTAGATTGGTGGGACGTGGA+AGG - Chr1:16817095-16817114 MsG0180001172.01.T01:intron 55.0%
TACGTGGAAGTTGCCCCTAC+AGG + Chr1:16811474-16811493 None:intergenic 55.0%
TAGAAGAGAGGAGAGGAGGG+TGG + Chr1:16811633-16811652 None:intergenic 55.0%
TGAGGGGGAGGAAAAGTAGG+CGG - Chr1:16812917-16812936 MsG0180001172.01.T01:intron 55.0%
!! GCAGGTGCTGGTCAAGATGT+TGG - Chr1:16806566-16806585 MsG0180001172.01.T01:three_prime_UTR 55.0%
CATCCCTGGACGACGTTACG+TGG + Chr1:16811490-16811509 None:intergenic 60.0%
GAGGGGGAGGAAAAGTAGGC+GGG - Chr1:16812918-16812937 MsG0180001172.01.T01:intron 60.0%
GCCGCTCCTAGGTGTCTATC+TGG + Chr1:16810221-16810240 None:intergenic 60.0%
GTTGGTTGATCGTCGGGGTG+AGG - Chr1:16808445-16808464 MsG0180001172.01.T01:intron 60.0%
GTTTCCCGAATGTGCGGCTC+TGG - Chr1:16808045-16808064 MsG0180001172.01.T01:intron 60.0%
!! GGTCGCAGTAGAAGCATCCC+TGG + Chr1:16811504-16811523 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr1 gene 16806461 16818173 16806461 ID=MsG0180001172.01;Name=MsG0180001172.01
Chr1 mRNA 16806461 16818173 16806461 ID=MsG0180001172.01.T01;Parent=MsG0180001172.01;Name=MsG0180001172.01.T01;_AED=0.28;_eAED=0.28;_QI=0|1|0.91|1|1|1|12|540|562
Chr1 exon 16806461 16807456 16806461 ID=MsG0180001172.01.T01:exon:5119;Parent=MsG0180001172.01.T01
Chr1 exon 16808470 16808566 16808470 ID=MsG0180001172.01.T01:exon:5118;Parent=MsG0180001172.01.T01
Chr1 exon 16809271 16809412 16809271 ID=MsG0180001172.01.T01:exon:5117;Parent=MsG0180001172.01.T01
Chr1 exon 16810460 16810564 16810460 ID=MsG0180001172.01.T01:exon:5116;Parent=MsG0180001172.01.T01
Chr1 exon 16811059 16811128 16811059 ID=MsG0180001172.01.T01:exon:5115;Parent=MsG0180001172.01.T01
Chr1 exon 16811827 16811892 16811827 ID=MsG0180001172.01.T01:exon:5114;Parent=MsG0180001172.01.T01
Chr1 exon 16813509 16813572 16813509 ID=MsG0180001172.01.T01:exon:5113;Parent=MsG0180001172.01.T01
Chr1 exon 16814355 16814491 16814355 ID=MsG0180001172.01.T01:exon:5112;Parent=MsG0180001172.01.T01
Chr1 exon 16815586 16815659 16815586 ID=MsG0180001172.01.T01:exon:5111;Parent=MsG0180001172.01.T01
Chr1 exon 16816122 16816239 16816122 ID=MsG0180001172.01.T01:exon:5110;Parent=MsG0180001172.01.T01
Chr1 exon 16817725 16817797 16817725 ID=MsG0180001172.01.T01:exon:5109;Parent=MsG0180001172.01.T01
Chr1 exon 16817887 16818173 16817887 ID=MsG0180001172.01.T01:exon:5108;Parent=MsG0180001172.01.T01
Chr1 CDS 16817887 16818173 16817887 ID=MsG0180001172.01.T01:cds;Parent=MsG0180001172.01.T01
Chr1 CDS 16817725 16817797 16817725 ID=MsG0180001172.01.T01:cds;Parent=MsG0180001172.01.T01
Chr1 CDS 16816122 16816239 16816122 ID=MsG0180001172.01.T01:cds;Parent=MsG0180001172.01.T01
Chr1 CDS 16815586 16815659 16815586 ID=MsG0180001172.01.T01:cds;Parent=MsG0180001172.01.T01
Chr1 CDS 16814355 16814491 16814355 ID=MsG0180001172.01.T01:cds;Parent=MsG0180001172.01.T01
Chr1 CDS 16813509 16813572 16813509 ID=MsG0180001172.01.T01:cds;Parent=MsG0180001172.01.T01
Chr1 CDS 16811827 16811892 16811827 ID=MsG0180001172.01.T01:cds;Parent=MsG0180001172.01.T01
Chr1 CDS 16811059 16811128 16811059 ID=MsG0180001172.01.T01:cds;Parent=MsG0180001172.01.T01
Chr1 CDS 16810460 16810564 16810460 ID=MsG0180001172.01.T01:cds;Parent=MsG0180001172.01.T01
Chr1 CDS 16809271 16809412 16809271 ID=MsG0180001172.01.T01:cds;Parent=MsG0180001172.01.T01
Chr1 CDS 16808470 16808566 16808470 ID=MsG0180001172.01.T01:cds;Parent=MsG0180001172.01.T01
Chr1 CDS 16807001 16807456 16807001 ID=MsG0180001172.01.T01:cds;Parent=MsG0180001172.01.T01
Chr1 three_prime_UTR 16806461 16807000 16806461 ID=MsG0180001172.01.T01:three_prime_utr;Parent=MsG0180001172.01.T01
Gene Sequence

>MsG0180001172.01.T01

ATGGCAATCCAAGCTCTAGTTTTAGGTATATATTTTCCTTCCTTCGTTCATTTCATTCTATGTTACAATCGAATCTCTTTTACGGTTATCAATTTCAATAAACGTGCAGGTGCTGGTCAAGATGTTGGAAAAAGCTGTGTAATAGTCAAAATCAATGGAAAGACAATCATGTTCGATTGCGGCATGCATATGCATCACACTGATCACCGTCGTTTTCCTGATTTCAAAAAGATTTCACATTCTGGAAATTACAATGATGCTCTTGACTGCATTATCATCACTCATTTTCACTTGGATCATGTTGGAGCATTGCCTTACTTCACTGAAGTTTGTGGGTACAGTGGACCAGTTTATATGACGTACCCAACAAAAGCTTTGTCTCCTTTGATGTTGGAAGACTTTCGGAAAGTGTTGGTTGATCGTCGGGGTGAGGAAGAACAATTCACTTCTGATCATATTACTGAGTGCATGAAGAAAGTTATTGCCGTAGATTTGAAGCAGACTGTGCAAGTAGATGAAGACCTGCAGATACGTGCATATTATGCAGGACATGTTATTGGAGCTGCAATGTTCTATGTAAAAGTGGGAGACGCAGAAATGGTTTATACAGGAGACTACAATATGACACCAGATAGACACCTAGGAGCGGCTCAAATTGATCGACTACGACTTGACCTTCTTATAACTGAATCCACTTATGCAACTACGATACGTGATTCAAAATGCGCTCGAGAGAGGGAATTCCTCAAAGCCGTTCATAAATGTGTTTCTGGAGGAGGAAAGGTGCTTATTCCAACATTTGCTCTTGGAAGAGCTCAGGAACTACGTATTTTGTTGGATGACTACTGGGAGCGCATGAATTTGAAGGTTCCTATCTACTTCTCATCAGGATTAACTATTCAAGCTAATACGTATCACAAGATGCTTATTGGTTGGACAAGCCAGAAGATTAAAGACACATACTCCACACATAATGCATTTGATTTTAAGAATGTTCACAAATTTGAGAGGTCTATGTTAGATGCTCCTGGTCCTTGTGTTCTCTTTGCCACTCCTGGGATGATACTTGGTGGATTTTCACTTGAAGTTTTCAAGCACTGGGCACCTTCAGAAAAAAATCTTGTCGCTTTGCCTGGGTATTGTATGGCTGGAACTGTAGGGCATAAATTAACGTCAGGTAAGCCCACCAAAGTTGATACAGATCCCGATACTCAGATAGATGTGCGTTGCCAGATTCATCAGTTGGCTTTTAGTCCTCACACTGACTCTAAAGGGATAATGGATCTTATAAAATTTCTCTCCCCAAAGCATGTTATGCTAGTGCATGGAGAGAAGCCTAAGATGGTTTCTCTAAAAGAAAGAATTGATTCTGAATTGAAGATTTCGTGTTCCCATCCTGCAAACAACGAAATTGTAAGAATTTCTTCAACTCCGTACGTAAATGCAGAAGCCTCCGACACTTTCATCAAAAACTGCTTGAATCCAAACTTCAAGTTTCAGAAATGCAGTTCAGTGGACACATGTAACTCTACTCTTATAGACAGAAACTTAACACCTGAACTTCAAGTTGAAGATGAAAGAGCAGCAGATGGAGTTTTGGTCATGGAGAATAATAATAATAAAAAGGCAAAGATTGTACAAGAAGATGAAATTTTGCTCATGTTGGACGAAAAGAAGCATGGGGTTTAG

Protein sequence

>MsG0180001172.01.T01

MAIQALVLGIYFPSFVHFILCYNRISFTVINFNKRAGAGQDVGKSCVIVKINGKTIMFDCGMHMHHTDHRRFPDFKKISHSGNYNDALDCIIITHFHLDHVGALPYFTEVCGYSGPVYMTYPTKALSPLMLEDFRKVLVDRRGEEEQFTSDHITECMKKVIAVDLKQTVQVDEDLQIRAYYAGHVIGAAMFYVKVGDAEMVYTGDYNMTPDRHLGAAQIDRLRLDLLITESTYATTIRDSKCAREREFLKAVHKCVSGGGKVLIPTFALGRAQELRILLDDYWERMNLKVPIYFSSGLTIQANTYHKMLIGWTSQKIKDTYSTHNAFDFKNVHKFERSMLDAPGPCVLFATPGMILGGFSLEVFKHWAPSEKNLVALPGYCMAGTVGHKLTSGKPTKVDTDPDTQIDVRCQIHQLAFSPHTDSKGIMDLIKFLSPKHVMLVHGEKPKMVSLKERIDSELKISCSHPANNEIVRISSTPYVNAEASDTFIKNCLNPNFKFQKCSSVDTCNSTLIDRNLTPELQVEDERAADGVLVMENNNNKKAKIVQEDEILLMLDEKKHGV*