AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001892.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001892.01.T01 MTR_1g046070 96.996 233 5 1 335 565 1 233 6.66e-151 432
MsG0180001892.01.T01 MTR_4g046673 70.000 140 32 1 1 140 1 130 3.90e-55 188
MsG0180001892.01.T01 MTR_1g057430 59.603 151 30 2 1 151 1 120 8.32e-48 163
MsG0180001892.01.T01 MTR_0127s0030 90.411 73 7 0 1 73 1 73 4.73e-40 140
MsG0180001892.01.T01 MTR_6g045657 95.455 66 3 0 1 66 1 66 8.14e-37 131
MsG0180001892.01.T01 MTR_3g463880 83.117 77 13 0 1 77 1 77 3.26e-36 132
MsG0180001892.01.T01 MTR_4g033005 91.667 60 5 0 1 60 1 60 5.36e-32 118
MsG0180001892.01.T01 MTR_4g091710 70.238 84 23 1 10 93 2 83 1.46e-31 119
MsG0180001892.01.T01 MTR_4g035750 64.286 112 36 2 165 274 73 182 7.54e-31 119
MsG0180001892.01.T01 MTR_6g033765 53.913 115 33 2 1 113 1 97 4.49e-29 114
MsG0180001892.01.T01 MTR_4g012970 52.727 110 37 1 111 220 1 95 4.53e-28 109
MsG0180001892.01.T01 MTR_2g038180 62.651 83 31 0 1 83 1 83 6.36e-28 107
MsG0180001892.01.T01 MTR_4g051502 87.719 57 7 0 1 57 1 57 3.56e-27 109
MsG0180001892.01.T01 MTR_7g035055 59.184 98 24 2 160 256 2 84 3.06e-26 102
MsG0180001892.01.T01 MTR_1g038290 84.211 57 9 0 1 57 1 57 4.57e-25 106
MsG0180001892.01.T01 MTR_3g069560 56.627 83 36 0 1 83 1 83 1.33e-24 99.4
MsG0180001892.01.T01 MTR_8g073390 55.435 92 41 0 23 114 1 92 1.37e-24 98.2
MsG0180001892.01.T01 MTR_5g099435 78.947 57 12 0 1 57 1 57 5.85e-24 95.9
MsG0180001892.01.T01 MTR_5g099425 78.947 57 12 0 1 57 1 57 5.85e-24 95.9
MsG0180001892.01.T01 MTR_1g027280 71.831 71 20 0 1 71 1 71 1.08e-23 100
MsG0180001892.01.T01 MTR_5g099415 81.818 55 10 0 1 55 1 55 2.78e-23 94.7
MsG0180001892.01.T01 MTR_4g020700 65.152 66 13 1 256 321 1800 1855 8.36e-22 100
MsG0180001892.01.T01 MTR_2g029310 71.930 57 16 0 1 57 12 68 1.37e-21 89.0
MsG0180001892.01.T01 MTR_7g022330 71.429 56 13 1 23 78 1 53 6.64e-20 84.3
MsG0180001892.01.T01 MTR_3g463890 94.872 39 2 0 1 39 1 39 1.71e-18 79.7
MsG0180001892.01.T01 MTR_2g038070 51.163 86 38 2 162 244 1 85 2.21e-18 80.9
MsG0180001892.01.T01 MTR_6g046055 88.372 43 5 0 1 43 1 43 3.15e-18 80.9
MsG0180001892.01.T01 MTR_3g052160 62.500 64 24 0 174 237 61 124 3.41e-18 82.0
MsG0180001892.01.T01 MTR_8g067970 46.903 113 24 2 162 274 1 77 7.03e-18 79.3
MsG0180001892.01.T01 MTR_2g012760 50.549 91 21 1 1 91 1 67 4.99e-17 77.8
MsG0180001892.01.T01 MTR_4g058610 60.714 56 22 0 1 56 1 56 1.53e-15 71.6
MsG0180001892.01.T01 MTR_4g026400 68.750 48 15 0 1 48 1 48 6.63e-15 70.5
MsG0180001892.01.T01 MTR_6g026760 59.259 54 22 0 151 204 3 56 6.66e-15 70.1
MsG0180001892.01.T01 MTR_3g008080 55.738 61 27 0 23 83 1 61 7.51e-15 69.7
MsG0180001892.01.T01 MTR_0491s0040 88.889 36 4 0 1 36 1 36 3.83e-14 69.7
MsG0180001892.01.T01 MTR_3g023190 60.000 50 20 0 54 103 13 62 7.42e-14 67.0
MsG0180001892.01.T01 MTR_1g076230 51.613 62 28 1 1 62 1 60 1.73e-13 66.6
MsG0180001892.01.T01 MTR_3g025405 77.500 40 9 0 23 62 1 40 1.04e-12 65.1
MsG0180001892.01.T01 MTR_8g038920 68.085 47 12 1 1 44 1 47 7.43e-12 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001892.01.T01 AT4G13540 46.061 165 71 4 383 546 37 184 1.29e-30 119
MsG0180001892.01.T01 AT3G23930 40.449 178 83 4 380 546 34 199 4.41e-22 95.5

Find 154 sgRNAs with CRISPR-Local

Find 401 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCCAATCGTGACACGATTT+TGG 0.138722 1:-28880305 MsG0180001892.01.T01:CDS
TTCACCGGAAGTAATGATTT+TGG 0.213790 1:-28881703 MsG0180001892.01.T01:CDS
TGAGAAAGAGTGGGAATTAA+TGG 0.247721 1:-28877157 MsG0180001892.01.T01:CDS
ACATCTAAAATCGAACAATT+TGG 0.248193 1:-28876118 MsG0180001892.01.T01:three_prime_UTR
ACTTACCATCATATGTTCTT+TGG 0.249382 1:+28877022 None:intergenic
GAAGAAGTTGAAAATCAAAT+TGG 0.250274 1:-28876183 MsG0180001892.01.T01:CDS
TTCTTCTCTTTAGTTTGAAT+TGG 0.254934 1:+28876203 None:intergenic
ATTGTATATGACCAAATCTT+TGG 0.296377 1:-28881464 MsG0180001892.01.T01:CDS
AAAGCTTTAAAAGCTCAATT+AGG 0.297525 1:-28876311 MsG0180001892.01.T01:CDS
GCACCAAACGTGTCATGATT+TGG 0.306183 1:-28880211 MsG0180001892.01.T01:CDS
ATTAATGGGGACTAAGCTTT+TGG 0.315398 1:-28877142 MsG0180001892.01.T01:CDS
TGCTTTAAGTGTCACAAGTT+TGG 0.329780 1:-28881058 MsG0180001892.01.T01:CDS
ATCGAACAATTTGGTTGAAT+AGG 0.329794 1:-28876109 MsG0180001892.01.T01:three_prime_UTR
AAAGGGAATTTGACTTGTTA+AGG 0.331176 1:-28876259 MsG0180001892.01.T01:CDS
TAAAGGAGATAATGTGTGAT+AGG 0.355573 1:-28877356 MsG0180001892.01.T01:CDS
TGACCAAATCTTTGGCTCAT+AGG 0.357247 1:-28881456 MsG0180001892.01.T01:CDS
GAAGGGTGAAGGTGCGTTGC+CGG 0.364503 1:-28881623 MsG0180001892.01.T01:CDS
CACCAAACGTGTCATGATTT+GGG 0.364581 1:-28880210 MsG0180001892.01.T01:CDS
GTGCTTTGGTGGTGAGTTGT+TGG 0.373419 1:-28880961 MsG0180001892.01.T01:CDS
ACTTCTACAAGAAGAAATAA+AGG 0.374088 1:-28877373 MsG0180001892.01.T01:CDS
CTTGGACTTGGTCAACTCCT+TGG 0.374590 1:+28881189 None:intergenic
TGCTTTGGTGGTGAGTTGTT+GGG 0.376565 1:-28880960 MsG0180001892.01.T01:CDS
ATGAGTAGAGTTGTTGCTTA+AGG 0.381349 1:+28881428 None:intergenic
TTCATCCGCTCTCAAGTCCT+TGG 0.383448 1:+28881171 None:intergenic
GAACTATGAGAGGGAGATAA+TGG 0.387809 1:-28877319 MsG0180001892.01.T01:CDS
CGCTCTCAAGTCCTTGGACT+TGG 0.388642 1:+28881177 None:intergenic
GTGCCATTGTCTTGTGCCTC+GGG 0.402353 1:-28881552 MsG0180001892.01.T01:CDS
GAGAAAGAGTGGGAATTAAT+GGG 0.405188 1:-28877156 MsG0180001892.01.T01:CDS
TTCAAGGATACCATGCTCTA+TGG 0.405520 1:-28881259 MsG0180001892.01.T01:CDS
AGAGGAAATGGTGGAGGTAG+AGG 0.414424 1:-28881124 MsG0180001892.01.T01:CDS
TTGCCTATGAGCCAAAGATT+TGG 0.422722 1:+28881453 None:intergenic
CTTAGTGTTTCAAGAGGAAA+TGG 0.424852 1:-28881136 MsG0180001892.01.T01:CDS
GAGGGAAGTGGTGGAAGAGA+AGG 0.429388 1:-28877229 MsG0180001892.01.T01:CDS
GTATGAGGATGCGGGTGCTT+TGG 0.429581 1:-28880975 MsG0180001892.01.T01:CDS
AAGAGAAGGAAGAGAAGATA+AGG 0.430927 1:-28877215 MsG0180001892.01.T01:CDS
TTCCCAAATCATGACACGTT+TGG 0.435253 1:+28880208 None:intergenic
GATAAGGTTGGTCGTACCTT+GGG 0.435774 1:-28880240 MsG0180001892.01.T01:CDS
AAGAAGTTGAAAATCAAATT+GGG 0.435875 1:-28876182 MsG0180001892.01.T01:CDS
GGTGAAGCAGTTGAGGGAAG+TGG 0.438865 1:-28877241 MsG0180001892.01.T01:CDS
AAGAAGAGGTGAAGCAGTTG+AGG 0.440787 1:-28877248 MsG0180001892.01.T01:CDS
CAACAAAATCCTTGATGACT+TGG 0.444620 1:-28881359 MsG0180001892.01.T01:CDS
TACCGCTCTTTGAGCTTCCT+CGG 0.448032 1:+28881098 None:intergenic
TCACAGGAGATGGTTTGTAT+TGG 0.451338 1:-28876403 MsG0180001892.01.T01:intron
GAGATCATTTGAATCCTTCA+AGG 0.451432 1:-28881275 MsG0180001892.01.T01:CDS
GACCGTGATGGAGCAATTAA+CGG 0.452897 1:-28881386 MsG0180001892.01.T01:CDS
AGAAGAATTGTGAGAAAGAG+TGG 0.454742 1:-28877167 MsG0180001892.01.T01:CDS
TAACCCAAAATCATTACTTC+CGG 0.455916 1:+28881699 None:intergenic
ATAAGGGAGATGGAAGAGGT+TGG 0.460472 1:-28877198 MsG0180001892.01.T01:CDS
ACTTGTTAAGGCAAAGTTTG+AGG 0.469148 1:-28876247 MsG0180001892.01.T01:CDS
AAGAAAGGTACAAACAAGAA+AGG 0.469395 1:-28876277 MsG0180001892.01.T01:CDS
GGTCTTCTCCGCTTGTGTCA+TGG 0.474445 1:+28881597 None:intergenic
AGAGAAGGAAGAGAAGATAA+GGG 0.476340 1:-28877214 MsG0180001892.01.T01:CDS
TCCCAAAATCGTGTCACGAT+TGG 0.479122 1:+28880303 None:intergenic
AGAAGAGGTGAAGCAGTTGA+GGG 0.480459 1:-28877247 MsG0180001892.01.T01:CDS
GGATAAGGTTGGTCGTACCT+TGG 0.486415 1:-28880241 MsG0180001892.01.T01:CDS
AAGAGAGTAGGAACTATGAG+AGG 0.487797 1:-28877329 MsG0180001892.01.T01:CDS
GAAGATAAGGGAGATGGAAG+AGG 0.488344 1:-28877202 MsG0180001892.01.T01:CDS
ATAGAGCATGGTATCCTTGA+AGG 0.491949 1:+28881261 None:intergenic
TACAAATTGAAAATCTGAAG+AGG 0.492525 1:-28876361 MsG0180001892.01.T01:CDS
AGTTGTGTCCGAGGAGTATG+AGG 0.492723 1:-28880990 MsG0180001892.01.T01:CDS
AAAGTGTGAGAAAGCTTTGA+AGG 0.493672 1:-28881641 MsG0180001892.01.T01:CDS
CATTTCCTCTTGAAACACTA+AGG 0.497904 1:+28881137 None:intergenic
GTGATAGGGAGAAAGAGAGT+AGG 0.501313 1:-28877341 MsG0180001892.01.T01:CDS
TCACTTCAAGAGGGATTGTC+CGG 0.502878 1:-28881035 MsG0180001892.01.T01:CDS
GGAAGAGAAGATAAGGGAGA+TGG 0.503969 1:-28877208 MsG0180001892.01.T01:CDS
TCCGCTTGTGTCATGGTGAC+CGG 0.504242 1:+28881604 None:intergenic
TCTTGCAATTAAGAATGAGT+TGG 0.505081 1:-28877055 MsG0180001892.01.T01:CDS
AAGGAATTAAAATAAGTAAG+TGG 0.507712 1:+28876057 None:intergenic
CCTAGCCTTGTCCACCATCT+CGG 0.507892 1:+28881576 None:intergenic
GAGATGAAGCTGTTGAGAAG+TGG 0.508742 1:-28877089 MsG0180001892.01.T01:CDS
TAGGTTCAGTGGAGAAAGAA+AGG 0.512086 1:-28876292 MsG0180001892.01.T01:CDS
GAAGCAGTTGAGGGAAGTGG+TGG 0.513840 1:-28877238 MsG0180001892.01.T01:CDS
AAAAGCTCAATTAGGTTCAG+TGG 0.518823 1:-28876303 MsG0180001892.01.T01:CDS
GTTTCAAGAGGAAATGGTGG+AGG 0.521669 1:-28881130 MsG0180001892.01.T01:CDS
AGAGAGTAGGAACTATGAGA+GGG 0.522297 1:-28877328 MsG0180001892.01.T01:CDS
CTCATCCAAAGAACATATGA+TGG 0.522947 1:-28877027 MsG0180001892.01.T01:intron
ACAAGGGGCCAATTCAAAGA+TGG 0.524101 1:-28877475 MsG0180001892.01.T01:CDS
AGTGCCATTGTCTTGTGCCT+CGG 0.524739 1:-28881553 MsG0180001892.01.T01:CDS
CCGAGATGGTGGACAAGGCT+AGG 0.525892 1:-28881576 MsG0180001892.01.T01:CDS
AAAGGAGATAATGTGTGATA+GGG 0.526845 1:-28877355 MsG0180001892.01.T01:CDS
GTCCGAGGAGTATGAGGATG+CGG 0.527850 1:-28880984 MsG0180001892.01.T01:CDS
GTGAGTTGTTGGGAGGATGA+AGG 0.529543 1:-28880950 MsG0180001892.01.T01:CDS
AGAAAGGTACAAACAAGAAA+GGG 0.530283 1:-28876276 MsG0180001892.01.T01:CDS
GCGGAGTTCTCATTGTCCTC+CGG 0.531312 1:+28881016 None:intergenic
GTCTTCTTTGCCATAGAGCA+TGG 0.538226 1:+28881249 None:intergenic
CAAGGGGCCAATTCAAAGAT+GGG 0.538294 1:-28877474 MsG0180001892.01.T01:CDS
GGAGATGGAAGAGGTTGGAA+TGG 0.546010 1:-28877193 MsG0180001892.01.T01:CDS
ACAAGTTTGGTCACTTCAAG+AGG 0.546276 1:-28881045 MsG0180001892.01.T01:CDS
CAAAGAAGACACTGTCACCT+TGG 0.547361 1:-28881236 MsG0180001892.01.T01:CDS
CAATGTTCTCCAAGTCATCA+AGG 0.551753 1:+28881350 None:intergenic
GGAAAATAAAATGCAAACAT+TGG 0.554585 1:-28876161 MsG0180001892.01.T01:exon
TGAGGATGCGGGTGCTTTGG+TGG 0.560753 1:-28880972 MsG0180001892.01.T01:CDS
GGCGTCGATGTGGTCAAAGT+TGG 0.562456 1:-28881491 MsG0180001892.01.T01:CDS
CAAAGTTTGAGGATCATGAA+TGG 0.562620 1:-28876236 MsG0180001892.01.T01:CDS
GGTGAAGAGGTTGAAAGAAG+AGG 0.569093 1:-28877262 MsG0180001892.01.T01:CDS
GAAGGTGAGGTTTCTCACCT+TGG 0.571223 1:-28880932 MsG0180001892.01.T01:intron
AAGCTCAAAGAGCGGTAACA+AGG 0.575233 1:-28881092 MsG0180001892.01.T01:CDS
AGCCGCTTGAACTTCTTCCA+AGG 0.576012 1:+28881219 None:intergenic
AATGTCCCACTTTGAACCCA+TGG 0.576906 1:+28881732 None:intergenic
TTGAAGGATTCAAATGATCT+CGG 0.580845 1:+28881277 None:intergenic
CACCTTGGAAGAAGTTCAAG+CGG 0.582480 1:-28881221 MsG0180001892.01.T01:CDS
ACCCGCATCCTCATACTCCT+CGG 0.585475 1:+28880982 None:intergenic
AAACTACAACACTTGTCACA+AGG 0.585905 1:-28877492 MsG0180001892.01.T01:CDS
TTTGGTGGTGAGTTGTTGGG+AGG 0.589678 1:-28880957 MsG0180001892.01.T01:CDS
CGTTTGGTGCGTACAACCCA+AGG 0.589817 1:+28880224 None:intergenic
CTCCGTTAATTGCTCCATCA+CGG 0.594436 1:+28881384 None:intergenic
ATTGGAAACAAGAGGTGAAG+AGG 0.596605 1:-28877275 MsG0180001892.01.T01:CDS
TGGGACATTGAGAAGTTCAC+CGG 0.596874 1:-28881718 MsG0180001892.01.T01:CDS
ACAAATTGAAAATCTGAAGA+GGG 0.598118 1:-28876360 MsG0180001892.01.T01:CDS
AACCTACCGCGGCGTCGATG+TGG 0.598553 1:-28881501 MsG0180001892.01.T01:CDS
GAAGAATTGTGAGAAAGAGT+GGG 0.599083 1:-28877166 MsG0180001892.01.T01:CDS
TTGTTGGGAGGATGAAGGTG+AGG 0.602147 1:-28880945 MsG0180001892.01.T01:CDS
CAAGTTTGGTCACTTCAAGA+GGG 0.605450 1:-28881044 MsG0180001892.01.T01:CDS
AACTACAACACTTGTCACAA+GGG 0.607391 1:-28877491 MsG0180001892.01.T01:CDS
CAAGGAGTTGACCAAGTCCA+AGG 0.610256 1:-28881188 MsG0180001892.01.T01:CDS
AAGGGGCCAATTCAAAGATG+GGG 0.610731 1:-28877473 MsG0180001892.01.T01:CDS
AGCGGAGAAGACCGAGATGG+TGG 0.612541 1:-28881587 MsG0180001892.01.T01:CDS
ACTCTACTCATTCAAGATGG+TGG 0.613777 1:-28881416 MsG0180001892.01.T01:CDS
CTCCGCACAAGTTGTGTCCG+AGG 0.616931 1:-28880999 MsG0180001892.01.T01:CDS
TGCCATTGTCTTGTGCCTCG+GGG 0.618204 1:-28881551 MsG0180001892.01.T01:CDS
AGAAAGAGTGGGAATTAATG+GGG 0.618319 1:-28877155 MsG0180001892.01.T01:CDS
GAAGACCGAGATGGTGGACA+AGG 0.618666 1:-28881581 MsG0180001892.01.T01:CDS
AGATGAAGGAGGAAAGAGCA+AGG 0.618929 1:-28877113 MsG0180001892.01.T01:CDS
GAGTACCATGGGTTCAAAGT+GGG 0.619830 1:-28881737 None:intergenic
AAGTGTGAGAAAGCTTTGAA+GGG 0.620896 1:-28881640 MsG0180001892.01.T01:CDS
TCCGAGGAGTATGAGGATGC+GGG 0.622873 1:-28880983 MsG0180001892.01.T01:CDS
GACCACATCGACGCCGCGGT+AGG 0.630096 1:+28881499 None:intergenic
GGTGGAGTCAAAGACCGTGA+TGG 0.631375 1:-28881398 MsG0180001892.01.T01:CDS
TGAGTACCATGGGTTCAAAG+TGG 0.631608 1:-28881738 None:intergenic
GAAGGCCTTAGTGTTTCAAG+AGG 0.634692 1:-28881142 MsG0180001892.01.T01:CDS
TGATGACTTGGAGAACATTG+AGG 0.634735 1:-28881347 MsG0180001892.01.T01:CDS
TGGTTTGTATTGGAAAGCTG+AGG 0.636251 1:-28876393 MsG0180001892.01.T01:CDS
GCCGGTCACCATGACACAAG+CGG 0.637848 1:-28881605 MsG0180001892.01.T01:CDS
CTCCTCGGACACAACTTGTG+CGG 0.639356 1:+28880997 None:intergenic
ACAACTCTACTCATTCAAGA+TGG 0.639379 1:-28881419 MsG0180001892.01.T01:CDS
AGTGTTTCAAGAGGAAATGG+TGG 0.640678 1:-28881133 MsG0180001892.01.T01:CDS
GAGAAAGCTTTGAAGGGTGA+AGG 0.641900 1:-28881634 MsG0180001892.01.T01:CDS
GGAGGCAGATTGGAAACAAG+AGG 0.643296 1:-28877283 MsG0180001892.01.T01:CDS
AGAGCGGATGAAAACAGTGA+AGG 0.645357 1:-28881160 MsG0180001892.01.T01:CDS
TTTGGTTCAAGAGATGAAGG+AGG 0.645416 1:-28877124 MsG0180001892.01.T01:CDS
CCCTCAAAACTTTGTCCCCG+AGG 0.654222 1:+28881536 None:intergenic
GTCCCCGAGGCACAAGACAA+TGG 0.658004 1:+28881549 None:intergenic
AGGGGCCAATTCAAAGATGG+GGG 0.664758 1:-28877472 MsG0180001892.01.T01:CDS
ACTACAACACTTGTCACAAG+GGG 0.671010 1:-28877490 MsG0180001892.01.T01:CDS
CTTCAAGAGGGATTGTCCGG+AGG 0.685982 1:-28881032 MsG0180001892.01.T01:CDS
TCAAGCGGCTTTGAGAACCA+AGG 0.691700 1:-28881206 MsG0180001892.01.T01:CDS
CAAGTCCAAGGACTTGAGAG+CGG 0.694534 1:-28881176 MsG0180001892.01.T01:CDS
AACCGAGGAAGCTCAAAGAG+CGG 0.697406 1:-28881100 MsG0180001892.01.T01:CDS
ACAAGCGGAGAAGACCGAGA+TGG 0.697540 1:-28881590 MsG0180001892.01.T01:CDS
TGTCGCGAAGGAACCTACCG+CGG 0.701742 1:-28881512 MsG0180001892.01.T01:CDS
GGTGGAGGTAGAGGTAACCG+AGG 0.714904 1:-28881115 MsG0180001892.01.T01:CDS
ATGGAAGGTGAAGATGCAAG+CGG 0.716257 1:-28881677 MsG0180001892.01.T01:CDS
CTTTGACCACATCGACGCCG+CGG 0.724323 1:+28881495 None:intergenic
GGGGCCAATTCAAAGATGGG+GGG 0.731569 1:-28877471 MsG0180001892.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATATAAAAACATAGTAT+TGG - Chr1:28879426-28879445 MsG0180001892.01.T01:intron 10.0%
!! TAACCAAAAAAAATATATAA+AGG + Chr1:28879613-28879632 None:intergenic 10.0%
!! TACTTCTATAAATTTAATAA+TGG + Chr1:28880126-28880145 None:intergenic 10.0%
!!! ATTCCTTTATATATTTTTTT+TGG - Chr1:28879607-28879626 MsG0180001892.01.T01:intron 10.0%
!!! CAATCATTTATATTTTTTTT+AGG - Chr1:28879106-28879125 MsG0180001892.01.T01:intron 10.0%
!! ACACAAATTAAGAATTAAAA+AGG + Chr1:28879526-28879545 None:intergenic 15.0%
!! AGAAAAAATTTATCTTGTTA+AGG - Chr1:28879800-28879819 MsG0180001892.01.T01:intron 15.0%
!! TTCACACATATTAAAAAAAA+GGG + Chr1:28879325-28879344 None:intergenic 15.0%
!! TTCTATATAAAAGTTATCAA+TGG - Chr1:28879234-28879253 MsG0180001892.01.T01:intron 15.0%
!! TTTCACACATATTAAAAAAA+AGG + Chr1:28879326-28879345 None:intergenic 15.0%
!!! AAAAGTTTAACTTAAAATAG+AGG - Chr1:28878467-28878486 MsG0180001892.01.T01:intron 15.0%
!!! AAACTATAAACTGTTTTTAT+AGG + Chr1:28881026-28881045 None:intergenic 15.0%
!!! AAATTCATTACATATTTTTG+TGG + Chr1:28880378-28880397 None:intergenic 15.0%
!!! AACTTTTTCTTTTGAATATA+TGG + Chr1:28878454-28878473 None:intergenic 15.0%
!!! CTATAAATTTAATAATGGAA+GGG + Chr1:28880121-28880140 None:intergenic 15.0%
!!! GTTTTGCTTATATTTTATAA+GGG - Chr1:28878694-28878713 MsG0180001892.01.T01:intron 15.0%
!!! TATAAATTTAATAATGGAAG+GGG + Chr1:28880120-28880139 None:intergenic 15.0%
!!! TATTTAAAATGTTGTGAATT+CGG + Chr1:28878154-28878173 None:intergenic 15.0%
!!! TCTATAAATTTAATAATGGA+AGG + Chr1:28880122-28880141 None:intergenic 15.0%
!! AAAAGAGGATAATAATTAAG+AGG + Chr1:28880255-28880274 None:intergenic 20.0%
!! AAAGAGGATAATAATTAAGA+GGG + Chr1:28880254-28880273 None:intergenic 20.0%
!! AAATACAAACACTAATTGTT+TGG + Chr1:28881140-28881159 None:intergenic 20.0%
!! AAGAAGTTGAAAATCAAATT+GGG - Chr1:28881604-28881623 MsG0180001892.01.T01:CDS 20.0%
!! AAGGAATTAAAATAAGTAAG+TGG + Chr1:28881732-28881751 None:intergenic 20.0%
!! ACTATCGTTAGTTATTTATT+AGG + Chr1:28880003-28880022 None:intergenic 20.0%
!! ATAATTAAGAGGGTTAAATA+TGG + Chr1:28880244-28880263 None:intergenic 20.0%
!! ATCAGTTAAGTTAGAATTTA+CGG - Chr1:28879737-28879756 MsG0180001892.01.T01:intron 20.0%
!! ATTAATATGTGACAATAATG+TGG - Chr1:28881264-28881283 MsG0180001892.01.T01:CDS 20.0%
!! CATAAGTTAAGAACTAAAAA+TGG + Chr1:28878989-28879008 None:intergenic 20.0%
!! CTATCGTTAGTTATTTATTA+GGG + Chr1:28880002-28880021 None:intergenic 20.0%
!! TAATAAAAGCTGAAATTGTT+AGG + Chr1:28879718-28879737 None:intergenic 20.0%
!! TTTCACACATACAAAAAATA+AGG + Chr1:28878786-28878805 None:intergenic 20.0%
!!! AAAACTAACTTGTATTCTTA+AGG - Chr1:28878854-28878873 MsG0180001892.01.T01:intron 20.0%
!!! AAACTAACTTGTATTCTTAA+GGG - Chr1:28878855-28878874 MsG0180001892.01.T01:intron 20.0%
!!! AATTTTGAAAAGTACTATGA+TGG + Chr1:28881239-28881258 None:intergenic 20.0%
!!! ATAAATTTAATAATGGAAGG+GGG + Chr1:28880119-28880138 None:intergenic 20.0%
!!! ATTTTGAAAAGTACTATGAT+GGG + Chr1:28881238-28881257 None:intergenic 20.0%
!!! GGTTTTGCTTATATTTTATA+AGG - Chr1:28878693-28878712 MsG0180001892.01.T01:intron 20.0%
!!! TATTTTATGAAGTCAGATAA+GGG + Chr1:28880164-28880183 None:intergenic 20.0%
!!! TGAAAAGATGATTTTGTTTT+TGG - Chr1:28879355-28879374 MsG0180001892.01.T01:intron 20.0%
! AATTTATCTTGTTAAGGACA+CGG - Chr1:28879806-28879825 MsG0180001892.01.T01:intron 25.0%
! ACAAATTGAAAATCTGAAGA+GGG - Chr1:28881426-28881445 MsG0180001892.01.T01:CDS 25.0%
! ACTTCTACAAGAAGAAATAA+AGG - Chr1:28880413-28880432 MsG0180001892.01.T01:intron 25.0%
! ACTTGATAAGAGGTTTAAAA+TGG - Chr1:28879155-28879174 MsG0180001892.01.T01:intron 25.0%
! ATAAAATAGCCCAAAATTCT+TGG - Chr1:28880176-28880195 MsG0180001892.01.T01:intron 25.0%
! ATTGTATATGACCAAATCTT+TGG - Chr1:28876322-28876341 MsG0180001892.01.T01:CDS 25.0%
! CATTATTTCATGAGAAAACT+AGG - Chr1:28878270-28878289 MsG0180001892.01.T01:intron 25.0%
! GAAGAAGTTGAAAATCAAAT+TGG - Chr1:28881603-28881622 MsG0180001892.01.T01:CDS 25.0%
! GGAAAATAAAATGCAAACAT+TGG - Chr1:28881625-28881644 MsG0180001892.01.T01:CDS 25.0%
! TACAAATTGAAAATCTGAAG+AGG - Chr1:28881425-28881444 MsG0180001892.01.T01:CDS 25.0%
! TACGTGGCAATATAAATTAT+AGG + Chr1:28879963-28879982 None:intergenic 25.0%
! TCTTACAAAGAGATACAAAT+GGG + Chr1:28877875-28877894 None:intergenic 25.0%
! TTAAATATGGAGTTATGTAC+AGG + Chr1:28880231-28880250 None:intergenic 25.0%
! TTCACATGCAAATATTTCTT+TGG + Chr1:28878338-28878357 None:intergenic 25.0%
!! ACATCTAAAATCGAACAATT+TGG - Chr1:28881668-28881687 MsG0180001892.01.T01:CDS 25.0%
!! CTATTTTATGAAGTCAGATA+AGG + Chr1:28880165-28880184 None:intergenic 25.0%
!! GATATATTTTGCTCAAAGTT+TGG + Chr1:28879030-28879049 None:intergenic 25.0%
!! GATCTATTTTACTCTGAATT+TGG + Chr1:28878658-28878677 None:intergenic 25.0%
!! TAAATTTAATAATGGAAGGG+GGG + Chr1:28880118-28880137 None:intergenic 25.0%
!! TGCTTATATTTTATAAGGGA+TGG - Chr1:28878698-28878717 MsG0180001892.01.T01:intron 25.0%
!!! AAAGCTTTAAAAGCTCAATT+AGG - Chr1:28881475-28881494 MsG0180001892.01.T01:CDS 25.0%
!!! AATTCTTAATTTGTGTCCTT+AGG - Chr1:28879530-28879549 MsG0180001892.01.T01:intron 25.0%
!!! ATTCTTAATTTGTGTCCTTA+GGG - Chr1:28879531-28879550 MsG0180001892.01.T01:intron 25.0%
!!! TAGATCAATTTTGTTTGACT+TGG - Chr1:28878672-28878691 MsG0180001892.01.T01:intron 25.0%
!!! TTCTTCTCTTTAGTTTGAAT+TGG + Chr1:28881586-28881605 None:intergenic 25.0%
AAACCACAAGCAAAAGATAA+AGG + Chr1:28877999-28878018 None:intergenic 30.0%
AAAGGAGATAATGTGTGATA+GGG - Chr1:28880431-28880450 MsG0180001892.01.T01:intron 30.0%
AACCACAAGCAAAAGATAAA+GGG + Chr1:28877998-28878017 None:intergenic 30.0%
ACTTACCATCATATGTTCTT+TGG + Chr1:28880767-28880786 None:intergenic 30.0%
ATCGAACAATTTGGTTGAAT+AGG - Chr1:28881677-28881696 MsG0180001892.01.T01:CDS 30.0%
ATGTTATGGCTGCAAATATA+AGG + Chr1:28878373-28878392 None:intergenic 30.0%
ATTATACATTCTTCAAACCC+CGG + Chr1:28877149-28877168 None:intergenic 30.0%
ATTGTTCTCGTTCTATCATT+TGG - Chr1:28879064-28879083 MsG0180001892.01.T01:intron 30.0%
CATCATCAATTTAGAAGTCA+AGG - Chr1:28877344-28877363 MsG0180001892.01.T01:CDS 30.0%
CTCTTACAAAGAGATACAAA+TGG + Chr1:28877876-28877895 None:intergenic 30.0%
CTGTAAAACGACAACAATAA+AGG + Chr1:28879848-28879867 None:intergenic 30.0%
CTTGAAGAGAGAAAAAACTT+GGG - Chr1:28877667-28877686 MsG0180001892.01.T01:intron 30.0%
GAGTCTATCAATACTTGATA+AGG - Chr1:28878720-28878739 MsG0180001892.01.T01:intron 30.0%
GCTTGTGTTTACTTTGATAT+TGG - Chr1:28878074-28878093 MsG0180001892.01.T01:intron 30.0%
GGTTTGAAGAATGTATAATG+TGG - Chr1:28877150-28877169 MsG0180001892.01.T01:CDS 30.0%
TAAAGGAGATAATGTGTGAT+AGG - Chr1:28880430-28880449 MsG0180001892.01.T01:intron 30.0%
TAACCCAAAATCATTACTTC+CGG + Chr1:28876090-28876109 None:intergenic 30.0%
TCTACAAAGAATCAATACCA+AGG + Chr1:28876874-28876893 None:intergenic 30.0%
TCTTGCAATTAAGAATGAGT+TGG - Chr1:28880731-28880750 MsG0180001892.01.T01:intron 30.0%
TGTATGTGTGAAATGAACAA+CGG - Chr1:28878793-28878812 MsG0180001892.01.T01:intron 30.0%
TTATAGTGAGAGATGAAAAG+AGG + Chr1:28880270-28880289 None:intergenic 30.0%
TTGAAGGATTCAAATGATCT+CGG + Chr1:28876512-28876531 None:intergenic 30.0%
TTGATTCCTAGATTAGATCT+AGG - Chr1:28878032-28878051 MsG0180001892.01.T01:intron 30.0%
! AAGAAAGGTACAAACAAGAA+AGG - Chr1:28881509-28881528 MsG0180001892.01.T01:CDS 30.0%
! AGAAAGGTACAAACAAGAAA+GGG - Chr1:28881510-28881529 MsG0180001892.01.T01:CDS 30.0%
! AGATAGAAATAGAAAGTACG+TGG + Chr1:28879979-28879998 None:intergenic 30.0%
! TACTTGAGCTTATTTGCTTT+TGG - Chr1:28881352-28881371 MsG0180001892.01.T01:CDS 30.0%
! TCTTGTTTATTGGTGAGATT+GGG - Chr1:28877791-28877810 MsG0180001892.01.T01:intron 30.0%
! TTTGGTCTATTTTGCTCTAA+GGG + Chr1:28879012-28879031 None:intergenic 30.0%
!! AAAGGGAATTTGACTTGTTA+AGG - Chr1:28881527-28881546 MsG0180001892.01.T01:CDS 30.0%
!! GATAATGGTGTTTGCTTTTA+AGG - Chr1:28880482-28880501 MsG0180001892.01.T01:intron 30.0%
!! TCATTGAGTGTCTTGTTTAT+TGG - Chr1:28877781-28877800 MsG0180001892.01.T01:intron 30.0%
!!! AGAAAAAGCACCAAGAATTT+TGG + Chr1:28880189-28880208 None:intergenic 30.0%
!!! GAAAAAGCACCAAGAATTTT+GGG + Chr1:28880188-28880207 None:intergenic 30.0%
!!! GAAGTAATGATTTTGGGTTA+TGG - Chr1:28876090-28876109 MsG0180001892.01.T01:three_prime_UTR 30.0%
!!! TAATGATTTTGGGTTATGGA+AGG - Chr1:28876094-28876113 MsG0180001892.01.T01:three_prime_UTR 30.0%
!!! TTTTTTAACATGTGCCCTTA+AGG + Chr1:28879402-28879421 None:intergenic 30.0%
AAAAGCTCAATTAGGTTCAG+TGG - Chr1:28881483-28881502 MsG0180001892.01.T01:CDS 35.0%
AAACTACAACACTTGTCACA+AGG - Chr1:28880294-28880313 MsG0180001892.01.T01:CDS 35.0%
AAATGTTAACAAGTGCCCTT+AGG - Chr1:28879130-28879149 MsG0180001892.01.T01:intron 35.0%
AACTACAACACTTGTCACAA+GGG - Chr1:28880295-28880314 MsG0180001892.01.T01:CDS 35.0%
AACTAGACATAGAGATGAGT+AGG + Chr1:28878403-28878422 None:intergenic 35.0%
AAGAGAAGGAAGAGAAGATA+AGG - Chr1:28880571-28880590 MsG0180001892.01.T01:intron 35.0%
AAGGTAAAGAAAAAGGGGAT+TGG - Chr1:28877299-28877318 MsG0180001892.01.T01:CDS 35.0%
AAGGTGGAGAATGTTGTAAT+TGG - Chr1:28877363-28877382 MsG0180001892.01.T01:CDS 35.0%
AATGTTAACAAGTGCCCTTA+GGG - Chr1:28879131-28879150 MsG0180001892.01.T01:intron 35.0%
ACAACTCTACTCATTCAAGA+TGG - Chr1:28876367-28876386 MsG0180001892.01.T01:CDS 35.0%
AGAAAGAGTGGGAATTAATG+GGG - Chr1:28880631-28880650 MsG0180001892.01.T01:intron 35.0%
AGAAGAATTGTGAGAAAGAG+TGG - Chr1:28880619-28880638 MsG0180001892.01.T01:intron 35.0%
AGAGAAGGAAGAGAAGATAA+GGG - Chr1:28880572-28880591 MsG0180001892.01.T01:intron 35.0%
ATGTGAATTCTTCATGAGGA+CGG - Chr1:28877115-28877134 MsG0180001892.01.T01:CDS 35.0%
ATTGGTGAGATTGGGAAAAT+GGG - Chr1:28877799-28877818 MsG0180001892.01.T01:intron 35.0%
ATTGTGAAGTTGGGAAAACT+TGG - Chr1:28877393-28877412 MsG0180001892.01.T01:CDS 35.0%
CAAAGTTTGAGGATCATGAA+TGG - Chr1:28881550-28881569 MsG0180001892.01.T01:CDS 35.0%
CATCAATTTAGAAGTCAAGG+TGG - Chr1:28877347-28877366 MsG0180001892.01.T01:CDS 35.0%
CATTTCCTCTTGAAACACTA+AGG + Chr1:28876652-28876671 None:intergenic 35.0%
CCAATACAAACTATGATGTG+TGG + Chr1:28878118-28878137 None:intergenic 35.0%
CTATCCATATGTGTCAATTG+AGG - Chr1:28878216-28878235 MsG0180001892.01.T01:intron 35.0%
CTCATCCAAAGAACATATGA+TGG - Chr1:28880759-28880778 MsG0180001892.01.T01:intron 35.0%
CTTAGTGTTTCAAGAGGAAA+TGG - Chr1:28876650-28876669 MsG0180001892.01.T01:intron 35.0%
GAAGAATTGTGAGAAAGAGT+GGG - Chr1:28880620-28880639 MsG0180001892.01.T01:intron 35.0%
GAGAAAGAGTGGGAATTAAT+GGG - Chr1:28880630-28880649 MsG0180001892.01.T01:intron 35.0%
GAGATCATTTGAATCCTTCA+AGG - Chr1:28876511-28876530 MsG0180001892.01.T01:intron 35.0%
GATGCAAGGTAAAGAAAAAG+GGG - Chr1:28877294-28877313 MsG0180001892.01.T01:CDS 35.0%
GCTTGAAGAGAGAAAAAACT+TGG - Chr1:28877666-28877685 MsG0180001892.01.T01:intron 35.0%
GGAAACATTGTAAACACCTT+GGG - Chr1:28877748-28877767 MsG0180001892.01.T01:intron 35.0%
GGATGCAAGGTAAAGAAAAA+GGG - Chr1:28877293-28877312 MsG0180001892.01.T01:CDS 35.0%
GGCTTCAAAATTGTGAAGTT+GGG - Chr1:28877384-28877403 MsG0180001892.01.T01:CDS 35.0%
GGGAAAATGGGTAGAAATTA+GGG - Chr1:28877811-28877830 MsG0180001892.01.T01:intron 35.0%
GTAACCTCAATTGACACATA+TGG + Chr1:28878223-28878242 None:intergenic 35.0%
GTATGTGTGAAATGAACAAC+GGG - Chr1:28878794-28878813 MsG0180001892.01.T01:intron 35.0%
TATGGAGTTATGTACAGGTT+AGG + Chr1:28880226-28880245 None:intergenic 35.0%
TATTGGTGAGATTGGGAAAA+TGG - Chr1:28877798-28877817 MsG0180001892.01.T01:intron 35.0%
TGAACAACGGGATGAAAAAA+TGG - Chr1:28878806-28878825 MsG0180001892.01.T01:intron 35.0%
TGAGAAAGAGTGGGAATTAA+TGG - Chr1:28880629-28880648 MsG0180001892.01.T01:intron 35.0%
TGGATGCAAGGTAAAGAAAA+AGG - Chr1:28877292-28877311 MsG0180001892.01.T01:CDS 35.0%
TGGCTTCAAAATTGTGAAGT+TGG - Chr1:28877383-28877402 MsG0180001892.01.T01:CDS 35.0%
TGGGAAAATGGGTAGAAATT+AGG - Chr1:28877810-28877829 MsG0180001892.01.T01:intron 35.0%
TTGAATATATGGCTCCTTGT+TGG + Chr1:28878443-28878462 None:intergenic 35.0%
TTGTAAGAGCTCATTGATAG+TGG - Chr1:28877887-28877906 MsG0180001892.01.T01:intron 35.0%
! AAAACGTGACACGATTTTGA+CGG - Chr1:28877599-28877618 MsG0180001892.01.T01:intron 35.0%
! AAAGTGTGAGAAAGCTTTGA+AGG - Chr1:28876145-28876164 MsG0180001892.01.T01:three_prime_UTR 35.0%
! ACTAGGTGTCGTCAAATAAT+TGG - Chr1:28878287-28878306 MsG0180001892.01.T01:intron 35.0%
! ACTTGTTAAGGCAAAGTTTG+AGG - Chr1:28881539-28881558 MsG0180001892.01.T01:CDS 35.0%
! ATGAGTAGAGTTGTTGCTTA+AGG + Chr1:28876361-28876380 None:intergenic 35.0%
! ATTAATGGGGACTAAGCTTT+TGG - Chr1:28880644-28880663 MsG0180001892.01.T01:intron 35.0%
! CAACAAAATCCTTGATGACT+TGG - Chr1:28876427-28876446 MsG0180001892.01.T01:intron 35.0%
! CCACACATCATAGTTTGTAT+TGG - Chr1:28878115-28878134 MsG0180001892.01.T01:intron 35.0%
! GTGTTCTTTGCAGATTTTGA+AGG - Chr1:28877640-28877659 MsG0180001892.01.T01:intron 35.0%
! GTTTGGTCTATTTTGCTCTA+AGG + Chr1:28879013-28879032 None:intergenic 35.0%
! TCACCGGAAGTAATGATTTT+GGG - Chr1:28876084-28876103 MsG0180001892.01.T01:three_prime_UTR 35.0%
! TGCTTTAAGTGTCACAAGTT+TGG - Chr1:28876728-28876747 MsG0180001892.01.T01:intron 35.0%
! TTCACCGGAAGTAATGATTT+TGG - Chr1:28876083-28876102 MsG0180001892.01.T01:three_prime_UTR 35.0%
! TTGTGAGTGTGAGTTTTCAA+TGG + Chr1:28879655-28879674 None:intergenic 35.0%
!! AAATATTTCTTTGGAGCGTG+GGG + Chr1:28878329-28878348 None:intergenic 35.0%
!! AAGTGTGAGAAAGCTTTGAA+GGG - Chr1:28876146-28876165 MsG0180001892.01.T01:three_prime_UTR 35.0%
!! AATGGTGTTTGCTTTTAAGG+AGG - Chr1:28880485-28880504 MsG0180001892.01.T01:intron 35.0%
!! CAAATATTTCTTTGGAGCGT+GGG + Chr1:28878330-28878349 None:intergenic 35.0%
!! GCTTTTGGAAATATACTCAC+AGG - Chr1:28881367-28881386 MsG0180001892.01.T01:CDS 35.0%
!! GGTATTGATTCTTTGTAGAG+CGG - Chr1:28876875-28876894 MsG0180001892.01.T01:intron 35.0%
!! GTCTTGTTTATTGGTGAGAT+TGG - Chr1:28877790-28877809 MsG0180001892.01.T01:intron 35.0%
!!! GTGCTTTTTCTATCAATGTC+AGG - Chr1:28880198-28880217 MsG0180001892.01.T01:CDS 35.0%
AAAAGTAGTGTGTGGCAGAT+GGG - Chr1:28881205-28881224 MsG0180001892.01.T01:CDS 40.0%
AACATGTGCCCTTAAGGTAA+GGG + Chr1:28879396-28879415 None:intergenic 40.0%
AACTATGATGTGTGGAGCAA+AGG + Chr1:28878110-28878129 None:intergenic 40.0%
AACTTGTGCCCTTACCTTAA+GGG - Chr1:28879385-28879404 MsG0180001892.01.T01:intron 40.0%
AAGAGAGTAGGAACTATGAG+AGG - Chr1:28880457-28880476 MsG0180001892.01.T01:intron 40.0%
AATCGTGCTTCAATCCAACA+AGG - Chr1:28878426-28878445 MsG0180001892.01.T01:intron 40.0%
ACAAGTTTGGTCACTTCAAG+AGG - Chr1:28876741-28876760 MsG0180001892.01.T01:intron 40.0%
ACAGCACCTAGATCTAATCT+AGG + Chr1:28878041-28878060 None:intergenic 40.0%
ACTACAACACTTGTCACAAG+GGG - Chr1:28880296-28880315 MsG0180001892.01.T01:CDS 40.0%
ACTCTACTCATTCAAGATGG+TGG - Chr1:28876370-28876389 MsG0180001892.01.T01:CDS 40.0%
AGAAAAAGCTCAACTTGAGG+TGG - Chr1:28877029-28877048 MsG0180001892.01.T01:CDS 40.0%
AGAGAGTAGGAACTATGAGA+GGG - Chr1:28880458-28880477 MsG0180001892.01.T01:intron 40.0%
AGTGTTTCAAGAGGAAATGG+TGG - Chr1:28876653-28876672 MsG0180001892.01.T01:intron 40.0%
ATACTCGTGATCAACCTTTG+AGG - Chr1:28876955-28876974 MsG0180001892.01.T01:intron 40.0%
ATAGAGCATGGTATCCTTGA+AGG + Chr1:28876528-28876547 None:intergenic 40.0%
ATTGGAAACAAGAGGTGAAG+AGG - Chr1:28880511-28880530 MsG0180001892.01.T01:intron 40.0%
CAAGAAATGTTCACCCAGTT+CGG + Chr1:28877955-28877974 None:intergenic 40.0%
CAAGTTTGGTCACTTCAAGA+GGG - Chr1:28876742-28876761 MsG0180001892.01.T01:intron 40.0%
CAATGTTCTCCAAGTCATCA+AGG + Chr1:28876439-28876458 None:intergenic 40.0%
CACCAAACGTGTCATGATTT+GGG - Chr1:28877576-28877595 MsG0180001892.01.T01:intron 40.0%
CTTTGTAGTGAGGTTCTCTT+GGG - Chr1:28877722-28877741 MsG0180001892.01.T01:intron 40.0%
GAAAAAACTTGGGACTGCAA+AGG - Chr1:28877677-28877696 MsG0180001892.01.T01:intron 40.0%
GAAAACTCACACTCACAAGT+GGG - Chr1:28879657-28879676 MsG0180001892.01.T01:intron 40.0%
GAACTATGAGAGGGAGATAA+TGG - Chr1:28880467-28880486 MsG0180001892.01.T01:intron 40.0%
GAGCATGTGAATTCTTCATG+AGG - Chr1:28877111-28877130 MsG0180001892.01.T01:CDS 40.0%
GAGTAGGACACTACATGTTA+TGG + Chr1:28878387-28878406 None:intergenic 40.0%
GGAAATATACTCACAGGAGA+TGG - Chr1:28881373-28881392 MsG0180001892.01.T01:CDS 40.0%
GGGAAACATTGTAAACACCT+TGG - Chr1:28877747-28877766 MsG0180001892.01.T01:intron 40.0%
GGTAGAAAAAGCTCAACTTG+AGG - Chr1:28877026-28877045 MsG0180001892.01.T01:intron 40.0%
GTAAAGAAAAAGGGGATTGG+TGG - Chr1:28877302-28877321 MsG0180001892.01.T01:CDS 40.0%
GTGATTGCCTAAAAGACCAA+GGG - Chr1:28877178-28877197 MsG0180001892.01.T01:CDS 40.0%
TAACATGTGCCCTTAAGGTA+AGG + Chr1:28879397-28879416 None:intergenic 40.0%
TAGGTTCAGTGGAGAAAGAA+AGG - Chr1:28881494-28881513 MsG0180001892.01.T01:CDS 40.0%
TCAATTGAGGTTACTGTGCA+GGG - Chr1:28878229-28878248 MsG0180001892.01.T01:intron 40.0%
TCTTTGTAGTGAGGTTCTCT+TGG - Chr1:28877721-28877740 MsG0180001892.01.T01:intron 40.0%
TGAAAACTCACACTCACAAG+TGG - Chr1:28879656-28879675 MsG0180001892.01.T01:intron 40.0%
TGTGATTGCCTAAAAGACCA+AGG - Chr1:28877177-28877196 MsG0180001892.01.T01:CDS 40.0%
TTAAACACTCAACATCAGCC+TGG - Chr1:28876916-28876935 MsG0180001892.01.T01:intron 40.0%
TTCAAGGATACCATGCTCTA+TGG - Chr1:28876527-28876546 MsG0180001892.01.T01:intron 40.0%
TTCCCAAATCATGACACGTT+TGG + Chr1:28877581-28877600 None:intergenic 40.0%
TTGCCTATGAGCCAAAGATT+TGG + Chr1:28876336-28876355 None:intergenic 40.0%
! CAATGATTTTCACTCACCCA+AGG + Chr1:28877767-28877786 None:intergenic 40.0%
! CTCCCTTTATCTTTTGCTTG+TGG - Chr1:28877993-28878012 MsG0180001892.01.T01:intron 40.0%
! GGAAAACGTGACACGATTTT+CGG - Chr1:28877503-28877522 MsG0180001892.01.T01:intron 40.0%
! TCAAACTAACTTGTGCCCTA+AGG + Chr1:28879549-28879568 None:intergenic 40.0%
! TCACAGGAGATGGTTTGTAT+TGG - Chr1:28881383-28881402 MsG0180001892.01.T01:CDS 40.0%
! TCCAATCGTGACACGATTTT+GGG - Chr1:28877482-28877501 MsG0180001892.01.T01:CDS 40.0%
! TGACCAAATCTTTGGCTCAT+AGG - Chr1:28876330-28876349 MsG0180001892.01.T01:CDS 40.0%
! TGATGACTTGGAGAACATTG+AGG - Chr1:28876439-28876458 MsG0180001892.01.T01:intron 40.0%
! TGGTTTGTATTGGAAAGCTG+AGG - Chr1:28881393-28881412 MsG0180001892.01.T01:CDS 40.0%
! TTTGGTTCAAGAGATGAAGG+AGG - Chr1:28880662-28880681 MsG0180001892.01.T01:intron 40.0%
!! AGAGCTCATTGATAGTGGAT+TGG - Chr1:28877892-28877911 MsG0180001892.01.T01:intron 40.0%
!! GCAAATATTTCTTTGGAGCG+TGG + Chr1:28878331-28878350 None:intergenic 40.0%
!! GCCACACACTACTTTTCAAA+GGG + Chr1:28881201-28881220 None:intergenic 40.0%
!! TGCCACACACTACTTTTCAA+AGG + Chr1:28881202-28881221 None:intergenic 40.0%
!! TTGCTTTTAAGGAGGCAGAT+TGG - Chr1:28880493-28880512 MsG0180001892.01.T01:intron 40.0%
!! TTGGTGGTTGATGGTTAAAG+TGG - Chr1:28877318-28877337 MsG0180001892.01.T01:CDS 40.0%
!!! GCAAGTTTTGAGGATAAGGT+TGG - Chr1:28877534-28877553 MsG0180001892.01.T01:intron 40.0%
!!! GCTTTTGGTTCAAGAGATGA+AGG - Chr1:28880659-28880678 MsG0180001892.01.T01:intron 40.0%
AAAACTTGGGACTGCAAAGG+AGG - Chr1:28877680-28877699 MsG0180001892.01.T01:intron 45.0%
AAACTTGGGACTGCAAAGGA+GGG - Chr1:28877681-28877700 MsG0180001892.01.T01:intron 45.0%
AAAGTAGTGTGTGGCAGATG+GGG - Chr1:28881206-28881225 MsG0180001892.01.T01:CDS 45.0%
AAGAAGAGGTGAAGCAGTTG+AGG - Chr1:28880538-28880557 MsG0180001892.01.T01:intron 45.0%
AAGCTCAAAGAGCGGTAACA+AGG - Chr1:28876694-28876713 MsG0180001892.01.T01:intron 45.0%
AAGGGGCCAATTCAAAGATG+GGG - Chr1:28880313-28880332 MsG0180001892.01.T01:intron 45.0%
AAGGTGATCTTCAAGGAAGC+GGG - Chr1:28877212-28877231 MsG0180001892.01.T01:CDS 45.0%
ACAAGGGGCCAATTCAAAGA+TGG - Chr1:28880311-28880330 MsG0180001892.01.T01:CDS 45.0%
ACCTCTTATCAAGTGCCCTA+AGG + Chr1:28879149-28879168 None:intergenic 45.0%
ACCTTGAAACTCCACCTCAA+AGG + Chr1:28876972-28876991 None:intergenic 45.0%
ACTGCAAAGGAGGGAACTTT+AGG - Chr1:28877690-28877709 MsG0180001892.01.T01:intron 45.0%
ACTTCCCCCCATCTTTGAAT+TGG + Chr1:28880322-28880341 None:intergenic 45.0%
AGAAGAGGTGAAGCAGTTGA+GGG - Chr1:28880539-28880558 MsG0180001892.01.T01:intron 45.0%
AGAGCGGATGAAAACAGTGA+AGG - Chr1:28876626-28876645 MsG0180001892.01.T01:intron 45.0%
AGATGAAGGAGGAAAGAGCA+AGG - Chr1:28880673-28880692 MsG0180001892.01.T01:intron 45.0%
ATAAGGGAGATGGAAGAGGT+TGG - Chr1:28880588-28880607 MsG0180001892.01.T01:intron 45.0%
ATCCTTAACAAGTGCCCCTA+AGG - Chr1:28879271-28879290 MsG0180001892.01.T01:intron 45.0%
ATGGAAGGTGAAGATGCAAG+CGG - Chr1:28876109-28876128 MsG0180001892.01.T01:three_prime_UTR 45.0%
CAAAGAAGACACTGTCACCT+TGG - Chr1:28876550-28876569 MsG0180001892.01.T01:intron 45.0%
CAACTTGTGCCCTTACCTTA+AGG - Chr1:28879384-28879403 MsG0180001892.01.T01:intron 45.0%
CAAGGGGCCAATTCAAAGAT+GGG - Chr1:28880312-28880331 MsG0180001892.01.T01:intron 45.0%
CAAGGTGATCTTCAAGGAAG+CGG - Chr1:28877211-28877230 MsG0180001892.01.T01:CDS 45.0%
CACCAGGAATGGTACAACTA+TGG - Chr1:28877061-28877080 MsG0180001892.01.T01:CDS 45.0%
CACCTTGGAAGAAGTTCAAG+CGG - Chr1:28876565-28876584 MsG0180001892.01.T01:intron 45.0%
CAGGAATGGTACAACTATGG+AGG - Chr1:28877064-28877083 MsG0180001892.01.T01:CDS 45.0%
CCTAAAAGACCAAGGGTGAT+TGG - Chr1:28877185-28877204 MsG0180001892.01.T01:CDS 45.0%
CCTCTTATCAAGTGCCCTAA+GGG + Chr1:28879148-28879167 None:intergenic 45.0%
CGAACTGGGTGAACATTTCT+TGG - Chr1:28877953-28877972 MsG0180001892.01.T01:intron 45.0%
CTCCATAGTTGTACCATTCC+TGG + Chr1:28877066-28877085 None:intergenic 45.0%
CTCCGTTAATTGCTCCATCA+CGG + Chr1:28876405-28876424 None:intergenic 45.0%
CTGCAAAGGAGGGAACTTTA+GGG - Chr1:28877691-28877710 MsG0180001892.01.T01:intron 45.0%
GAAAAGTAGTGTGTGGCAGA+TGG - Chr1:28881204-28881223 MsG0180001892.01.T01:CDS 45.0%
GAAGATAAGGGAGATGGAAG+AGG - Chr1:28880584-28880603 MsG0180001892.01.T01:intron 45.0%
GAAGGCCTTAGTGTTTCAAG+AGG - Chr1:28876644-28876663 MsG0180001892.01.T01:intron 45.0%
GAATTCTTCATGAGGACGGA+AGG - Chr1:28877119-28877138 MsG0180001892.01.T01:CDS 45.0%
GAGATGAAGCTGTTGAGAAG+TGG - Chr1:28880697-28880716 MsG0180001892.01.T01:intron 45.0%
GCACCAAACGTGTCATGATT+TGG - Chr1:28877575-28877594 MsG0180001892.01.T01:intron 45.0%
GCATAGTGTGTGTACGCATT+TGG - Chr1:28876996-28877015 MsG0180001892.01.T01:intron 45.0%
GGAAGAGAAGATAAGGGAGA+TGG - Chr1:28880578-28880597 MsG0180001892.01.T01:intron 45.0%
GGTGAAGAGGTTGAAAGAAG+AGG - Chr1:28880524-28880543 MsG0180001892.01.T01:intron 45.0%
GGTTGAGTGTCTTTGTAGTG+AGG - Chr1:28877712-28877731 MsG0180001892.01.T01:intron 45.0%
GTCAATTGAGGTTACTGTGC+AGG - Chr1:28878228-28878247 MsG0180001892.01.T01:intron 45.0%
GTCTTCTTTGCCATAGAGCA+TGG + Chr1:28876540-28876559 None:intergenic 45.0%
GTGATAGGGAGAAAGAGAGT+AGG - Chr1:28880445-28880464 MsG0180001892.01.T01:intron 45.0%
GTGTACGCATTTGGAAGATG+AGG - Chr1:28877005-28877024 MsG0180001892.01.T01:intron 45.0%
GTTTCAAGAGGAAATGGTGG+AGG - Chr1:28876656-28876675 MsG0180001892.01.T01:intron 45.0%
TAGTGAGGTTCTCTTGGGTT+GGG - Chr1:28877727-28877746 MsG0180001892.01.T01:intron 45.0%
TCACTTCAAGAGGGATTGTC+CGG - Chr1:28876751-28876770 MsG0180001892.01.T01:intron 45.0%
TCCCAAAATCGTGTCACGAT+TGG + Chr1:28877486-28877505 None:intergenic 45.0%
TCCTTAACAAGTGCCCCTAA+GGG - Chr1:28879272-28879291 MsG0180001892.01.T01:intron 45.0%
TGGATGCAAGGTGATCTTCA+AGG - Chr1:28877205-28877224 MsG0180001892.01.T01:CDS 45.0%
TGGGACATTGAGAAGTTCAC+CGG - Chr1:28876068-28876087 MsG0180001892.01.T01:three_prime_UTR 45.0%
TGTAGACTTGTGGAGCTACT+TGG - Chr1:28877263-28877282 MsG0180001892.01.T01:CDS 45.0%
! AAAAGGGGATTGGTGGTTGA+TGG - Chr1:28877309-28877328 MsG0180001892.01.T01:CDS 45.0%
! CTTAAGGTAAGGGCACAAGT+TGG + Chr1:28879386-28879405 None:intergenic 45.0%
! GACCGTGATGGAGCAATTAA+CGG - Chr1:28876400-28876419 MsG0180001892.01.T01:CDS 45.0%
! GATAAGGTTGGTCGTACCTT+GGG - Chr1:28877546-28877565 MsG0180001892.01.T01:intron 45.0%
! GCCCTTTGAAAAGTAGTGTG+TGG - Chr1:28881197-28881216 MsG0180001892.01.T01:CDS 45.0%
! GTCCAATCGTGACACGATTT+TGG - Chr1:28877481-28877500 MsG0180001892.01.T01:CDS 45.0%
!! ACCTTTGAGGTGGAGTTTCA+AGG - Chr1:28876968-28876987 MsG0180001892.01.T01:intron 45.0%
!! ACTTGGTGTAGTTGGATGCA+AGG - Chr1:28877280-28877299 MsG0180001892.01.T01:CDS 45.0%
!! CCAATCACCCTTGGTCTTTT+AGG + Chr1:28877188-28877207 None:intergenic 45.0%
!! GAGAAAGCTTTGAAGGGTGA+AGG - Chr1:28876152-28876171 MsG0180001892.01.T01:three_prime_UTR 45.0%
!! TGCTTTGGTGGTGAGTTGTT+GGG - Chr1:28876826-28876845 MsG0180001892.01.T01:intron 45.0%
!!! CTGGGCAAGTTTTGAGGATA+AGG - Chr1:28877530-28877549 MsG0180001892.01.T01:intron 45.0%
!!! AAAATTAAATAAAATTCTTT+TGG + Chr1:28881052-28881071 None:intergenic 5.0%
!!! AATCATTTATATTTTTTTTA+GGG - Chr1:28879107-28879126 MsG0180001892.01.T01:intron 5.0%
AACCGAGGAAGCTCAAAGAG+CGG - Chr1:28876686-28876705 MsG0180001892.01.T01:intron 50.0%
ACACTCACAAGTGGGTGAAG+CGG - Chr1:28879665-28879684 MsG0180001892.01.T01:intron 50.0%
ACCAAGGGTGATTGGATGCA+AGG - Chr1:28877193-28877212 MsG0180001892.01.T01:CDS 50.0%
ACCTTGCATCCAATCACCCT+TGG + Chr1:28877197-28877216 None:intergenic 50.0%
AGACGTTCCGTGGTTGAAGA+GGG - Chr1:28877235-28877254 MsG0180001892.01.T01:CDS 50.0%
AGCCGCTTGAACTTCTTCCA+AGG + Chr1:28876570-28876589 None:intergenic 50.0%
AGGGGCCAATTCAAAGATGG+GGG - Chr1:28880314-28880333 MsG0180001892.01.T01:intron 50.0%
ATCAATCTCTCCCCCAGAGT+AGG - Chr1:28877919-28877938 MsG0180001892.01.T01:intron 50.0%
ATGGAAGGGGGGTGAAAACA+AGG + Chr1:28880107-28880126 None:intergenic 50.0%
ATTATTCACACCGCCTCTCC+AGG + Chr1:28876937-28876956 None:intergenic 50.0%
CAACTAGAGCATAGCACCCA+AGG + Chr1:28877090-28877109 None:intergenic 50.0%
CAAGGAGTTGACCAAGTCCA+AGG - Chr1:28876598-28876617 MsG0180001892.01.T01:intron 50.0%
CAAGTCCAAGGACTTGAGAG+CGG - Chr1:28876610-28876629 MsG0180001892.01.T01:intron 50.0%
CACCAAACCCTCTTCAACCA+CGG + Chr1:28877245-28877264 None:intergenic 50.0%
CACCCTGCAAAACATGCTCA+CGG + Chr1:28877462-28877481 None:intergenic 50.0%
GAAGGTGAGGTTTCTCACCT+TGG - Chr1:28876854-28876873 MsG0180001892.01.T01:intron 50.0%
GAGGTGGAGTTTCAAGGTGA+AGG - Chr1:28876974-28876993 MsG0180001892.01.T01:intron 50.0%
GGAGATGGAAGAGGTTGGAA+TGG - Chr1:28880593-28880612 MsG0180001892.01.T01:intron 50.0%
GGAGGCAGATTGGAAACAAG+AGG - Chr1:28880503-28880522 MsG0180001892.01.T01:intron 50.0%
GGTACAACTATGGAGGCCTT+GGG - Chr1:28877071-28877090 MsG0180001892.01.T01:CDS 50.0%
GGTCCAACTTGACCTACTCT+GGG + Chr1:28877934-28877953 None:intergenic 50.0%
GTAGTGAGGTTCTCTTGGGT+TGG - Chr1:28877726-28877745 MsG0180001892.01.T01:intron 50.0%
GTCCAACTTGACCTACTCTG+GGG + Chr1:28877933-28877952 None:intergenic 50.0%
GTGAGTTGTTGGGAGGATGA+AGG - Chr1:28876836-28876855 MsG0180001892.01.T01:intron 50.0%
TACCGCTCTTTGAGCTTCCT+CGG + Chr1:28876691-28876710 None:intergenic 50.0%
TCCAACTTGACCTACTCTGG+GGG + Chr1:28877932-28877951 None:intergenic 50.0%
TGCCCTAACAAGTGCCCTTA+GGG + Chr1:28879289-28879308 None:intergenic 50.0%
TGGAAGGGGGGTGAAAACAA+GGG + Chr1:28880106-28880125 None:intergenic 50.0%
TGGTACAACTATGGAGGCCT+TGG - Chr1:28877070-28877089 MsG0180001892.01.T01:CDS 50.0%
TTCATCCGCTCTCAAGTCCT+TGG + Chr1:28876618-28876637 None:intergenic 50.0%
TTCCGTGGTTGAAGAGGGTT+TGG - Chr1:28877240-28877259 MsG0180001892.01.T01:CDS 50.0%
TTGTTGGGAGGATGAAGGTG+AGG - Chr1:28876841-28876860 MsG0180001892.01.T01:intron 50.0%
TTTGTAGAGCGGTGTTCGTC+TGG - Chr1:28876886-28876905 MsG0180001892.01.T01:intron 50.0%
! AGAGGAAATGGTGGAGGTAG+AGG - Chr1:28876662-28876681 MsG0180001892.01.T01:intron 50.0%
! AGTGCCATTGTCTTGTGCCT+CGG - Chr1:28876233-28876252 MsG0180001892.01.T01:CDS 50.0%
! AGTTGTGTCCGAGGAGTATG+AGG - Chr1:28876796-28876815 MsG0180001892.01.T01:intron 50.0%
! ATGCCGTGAGCATGTTTTGC+AGG - Chr1:28877456-28877475 MsG0180001892.01.T01:CDS 50.0%
! CCCTTAGGGCACTTGATAAG+AGG - Chr1:28879145-28879164 MsG0180001892.01.T01:intron 50.0%
! CTCGTGATCAACCTTTGAGG+TGG - Chr1:28876958-28876977 MsG0180001892.01.T01:intron 50.0%
! CTTGGACTTGGTCAACTCCT+TGG + Chr1:28876600-28876619 None:intergenic 50.0%
! GGATAAGGTTGGTCGTACCT+TGG - Chr1:28877545-28877564 MsG0180001892.01.T01:intron 50.0%
! TGCCGTGAGCATGTTTTGCA+GGG - Chr1:28877457-28877476 MsG0180001892.01.T01:CDS 50.0%
!! AGGTCAAGTTGGACCGAACT+GGG - Chr1:28877939-28877958 MsG0180001892.01.T01:intron 50.0%
!! CCTCGGGGACAAAGTTTTGA+GGG - Chr1:28876250-28876269 MsG0180001892.01.T01:CDS 50.0%
!! GACACGATTTTCGGCTTGCT+GGG - Chr1:28877512-28877531 MsG0180001892.01.T01:intron 50.0%
!! GAGGGTTTGGTGTAGACTTG+TGG - Chr1:28877253-28877272 MsG0180001892.01.T01:CDS 50.0%
!! GGAGTTGATGACACCAGGAA+TGG - Chr1:28877050-28877069 MsG0180001892.01.T01:CDS 50.0%
!! GTGCTTTGGTGGTGAGTTGT+TGG - Chr1:28876825-28876844 MsG0180001892.01.T01:intron 50.0%
!! GTGGAGCTACTTGGTGTAGT+TGG - Chr1:28877272-28877291 MsG0180001892.01.T01:CDS 50.0%
!! TAGGTCAAGTTGGACCGAAC+TGG - Chr1:28877938-28877957 MsG0180001892.01.T01:intron 50.0%
!! TCAAGCGGCTTTGAGAACCA+AGG - Chr1:28876580-28876599 MsG0180001892.01.T01:intron 50.0%
!! TGACACGATTTTCGGCTTGC+TGG - Chr1:28877511-28877530 MsG0180001892.01.T01:intron 50.0%
!! TTTGGTGGTGAGTTGTTGGG+AGG - Chr1:28876829-28876848 MsG0180001892.01.T01:intron 50.0%
!!! AGTTTTGAGGGATGTCGCGA+AGG - Chr1:28876262-28876281 MsG0180001892.01.T01:CDS 50.0%
ACAAGCGGAGAAGACCGAGA+TGG - Chr1:28876196-28876215 MsG0180001892.01.T01:CDS 55.0%
ACCCGCATCCTCATACTCCT+CGG + Chr1:28876807-28876826 None:intergenic 55.0%
ACTCACAAGTGGGTGAAGCG+GGG - Chr1:28879667-28879686 MsG0180001892.01.T01:intron 55.0%
CACTCAACATCAGCCTGGAG+AGG - Chr1:28876921-28876940 MsG0180001892.01.T01:intron 55.0%
CACTCACAAGTGGGTGAAGC+GGG - Chr1:28879666-28879685 MsG0180001892.01.T01:intron 55.0%
CCCTCAAAACTTTGTCCCCG+AGG + Chr1:28876253-28876272 None:intergenic 55.0%
CGCTCTCAAGTCCTTGGACT+TGG + Chr1:28876612-28876631 None:intergenic 55.0%
CGGTCCAACTTGACCTACTC+TGG + Chr1:28877935-28877954 None:intergenic 55.0%
CTCCTCGGACACAACTTGTG+CGG + Chr1:28876792-28876811 None:intergenic 55.0%
CTTCAAGAGGGATTGTCCGG+AGG - Chr1:28876754-28876773 MsG0180001892.01.T01:intron 55.0%
GAAGCAGTTGAGGGAAGTGG+TGG - Chr1:28880548-28880567 MsG0180001892.01.T01:intron 55.0%
GAGACGTTCCGTGGTTGAAG+AGG - Chr1:28877234-28877253 MsG0180001892.01.T01:CDS 55.0%
GCCCTAACAAGTGCCCTTAG+GGG + Chr1:28879288-28879307 None:intergenic 55.0%
GCGGAGTTCTCATTGTCCTC+CGG + Chr1:28876773-28876792 None:intergenic 55.0%
GGGGCCAATTCAAAGATGGG+GGG - Chr1:28880315-28880334 MsG0180001892.01.T01:intron 55.0%
GGTCTTCTCCGCTTGTGTCA+TGG + Chr1:28876192-28876211 None:intergenic 55.0%
GGTGAAGCAGTTGAGGGAAG+TGG - Chr1:28880545-28880564 MsG0180001892.01.T01:intron 55.0%
GGTGGAGTCAAAGACCGTGA+TGG - Chr1:28876388-28876407 MsG0180001892.01.T01:CDS 55.0%
GTATGAGGATGCGGGTGCTT+TGG - Chr1:28876811-28876830 MsG0180001892.01.T01:intron 55.0%
GTGCCCTAACAAGTGCCCTT+AGG + Chr1:28879290-28879309 None:intergenic 55.0%
TCAACATCAGCCTGGAGAGG+CGG - Chr1:28876924-28876943 MsG0180001892.01.T01:intron 55.0%
TCCCCCAGAGTAGGTCAAGT+TGG - Chr1:28877928-28877947 MsG0180001892.01.T01:intron 55.0%
TCCGCTTGTGTCATGGTGAC+CGG + Chr1:28876185-28876204 None:intergenic 55.0%
TGCCATTGTCTTGTGCCTCG+GGG - Chr1:28876235-28876254 MsG0180001892.01.T01:CDS 55.0%
! GAGGGAAGTGGTGGAAGAGA+AGG - Chr1:28880557-28880576 MsG0180001892.01.T01:intron 55.0%
! GCCTCGGGGACAAAGTTTTG+AGG - Chr1:28876249-28876268 MsG0180001892.01.T01:CDS 55.0%
! GTCCGAGGAGTATGAGGATG+CGG - Chr1:28876802-28876821 MsG0180001892.01.T01:intron 55.0%
! GTGCCATTGTCTTGTGCCTC+GGG - Chr1:28876234-28876253 MsG0180001892.01.T01:CDS 55.0%
! TCCGAGGAGTATGAGGATGC+GGG - Chr1:28876803-28876822 MsG0180001892.01.T01:intron 55.0%
!! ATGAGGACGGAAGGCATTCC+GGG - Chr1:28877128-28877147 MsG0180001892.01.T01:CDS 55.0%
!! CATGAGGACGGAAGGCATTC+CGG - Chr1:28877127-28877146 MsG0180001892.01.T01:CDS 55.0%
!! CCTAGCCTTGTCCACCATCT+CGG + Chr1:28876213-28876232 None:intergenic 55.0%
!! CGTTTGGTGCGTACAACCCA+AGG + Chr1:28877565-28877584 None:intergenic 55.0%
!! GAAGACCGAGATGGTGGACA+AGG - Chr1:28876205-28876224 MsG0180001892.01.T01:CDS 55.0%
!! GAGGTGGAGTTGATGACACC+AGG - Chr1:28877045-28877064 MsG0180001892.01.T01:CDS 55.0%
!! GCCCCTAAGGGCACTTGTTA+GGG - Chr1:28879284-28879303 MsG0180001892.01.T01:intron 55.0%
!! GCCCTTAGGGGCACTTGTTA+AGG + Chr1:28879276-28879295 None:intergenic 55.0%
!! GGCGTCGATGTGGTCAAAGT+TGG - Chr1:28876295-28876314 MsG0180001892.01.T01:CDS 55.0%
!! TGCCCCTAAGGGCACTTGTT+AGG - Chr1:28879283-28879302 MsG0180001892.01.T01:intron 55.0%
!!! GGCTTGCTGGGCAAGTTTTG+AGG - Chr1:28877524-28877543 MsG0180001892.01.T01:intron 55.0%
AGCGGAGAAGACCGAGATGG+TGG - Chr1:28876199-28876218 MsG0180001892.01.T01:CDS 60.0%
CTCCGCACAAGTTGTGTCCG+AGG - Chr1:28876787-28876806 MsG0180001892.01.T01:intron 60.0%
CTTTGACCACATCGACGCCG+CGG + Chr1:28876294-28876313 None:intergenic 60.0%
GCCGGTCACCATGACACAAG+CGG - Chr1:28876181-28876200 MsG0180001892.01.T01:CDS 60.0%
GGTGGAGGTAGAGGTAACCG+AGG - Chr1:28876671-28876690 MsG0180001892.01.T01:intron 60.0%
GTCCCCGAGGCACAAGACAA+TGG + Chr1:28876240-28876259 None:intergenic 60.0%
TGAGGATGCGGGTGCTTTGG+TGG - Chr1:28876814-28876833 MsG0180001892.01.T01:intron 60.0%
TGTCGCGAAGGAACCTACCG+CGG - Chr1:28876274-28876293 MsG0180001892.01.T01:CDS 60.0%
! GAAGGGTGAAGGTGCGTTGC+CGG - Chr1:28876163-28876182 MsG0180001892.01.T01:exon 60.0%
!! CCGAGATGGTGGACAAGGCT+AGG - Chr1:28876210-28876229 MsG0180001892.01.T01:CDS 60.0%
!! TGAGGACGGAAGGCATTCCG+GGG - Chr1:28877129-28877148 MsG0180001892.01.T01:CDS 60.0%
AGGAAGCGGGAGACGTTCCG+TGG - Chr1:28877225-28877244 MsG0180001892.01.T01:CDS 65.0%
!! AACCTACCGCGGCGTCGATG+TGG - Chr1:28876285-28876304 MsG0180001892.01.T01:CDS 65.0%
GACCACATCGACGCCGCGGT+AGG + Chr1:28876290-28876309 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 28876056 28881752 28876056 ID=MsG0180001892.01;Name=MsG0180001892.01
Chr1 mRNA 28876056 28881752 28876056 ID=MsG0180001892.01.T01;Parent=MsG0180001892.01;Name=MsG0180001892.01.T01;_AED=0.57;_eAED=0.58;_QI=0|0.33|0.25|0.75|1|1|4|119|565
Chr1 exon 28876056 28876419 28876056 ID=MsG0180001892.01.T01:exon:42052;Parent=MsG0180001892.01.T01
Chr1 exon 28877028 28877517 28877028 ID=MsG0180001892.01.T01:exon:42051;Parent=MsG0180001892.01.T01
Chr1 exon 28880188 28880330 28880188 ID=MsG0180001892.01.T01:exon:42050;Parent=MsG0180001892.01.T01
Chr1 exon 28880933 28881752 28880933 ID=MsG0180001892.01.T01:exon:42049;Parent=MsG0180001892.01.T01
Chr1 CDS 28880933 28881752 28880933 ID=MsG0180001892.01.T01:cds;Parent=MsG0180001892.01.T01
Chr1 CDS 28880188 28880330 28880188 ID=MsG0180001892.01.T01:cds;Parent=MsG0180001892.01.T01
Chr1 CDS 28877028 28877517 28877028 ID=MsG0180001892.01.T01:cds;Parent=MsG0180001892.01.T01
Chr1 CDS 28876175 28876419 28876175 ID=MsG0180001892.01.T01:cds;Parent=MsG0180001892.01.T01
Chr1 three_prime_UTR 28876056 28876174 28876056 ID=MsG0180001892.01.T01:three_prime_utr;Parent=MsG0180001892.01.T01
Gene Sequence

>MsG0180001892.01.T01

ATGGGTTCAAAGTGGGACATTGAGAAGTTCACCGGAAGTAATGATTTTGGGTTATGGAAGGTGAAGATGCAAGCGGTGTTGATACAACAAAAGTGTGAGAAAGCTTTGAAGGGTGAAGGTGCGTTGCCGGTCACCATGACACAAGCGGAGAAGACCGAGATGGTGGACAAGGCTAGGAGTGCCATTGTCTTGTGCCTCGGGGACAAAGTTTTGAGGGATGTCGCGAAGGAACCTACCGCGGCGTCGATGTGGTCAAAGTTGGAATCATTGTATATGACCAAATCTTTGGCTCATAGGCAATTCCTTAAGCAACAACTCTACTCATTCAAGATGGTGGAGTCAAAGACCGTGATGGAGCAATTAACGGAGTTCAACAAAATCCTTGATGACTTGGAGAACATTGAGGTGAATCTTGAAGACGAAGACAAAGCTATACTCTTGTTGTGTGCTCTACCGAGATCATTTGAATCCTTCAAGGATACCATGCTCTATGGCAAAGAAGACACTGTCACCTTGGAAGAAGTTCAAGCGGCTTTGAGAACCAAGGAGTTGACCAAGTCCAAGGACTTGAGAGCGGATGAAAACAGTGAAGGCCTTAGTGTTTCAAGAGGAAATGGTGGAGGTAGAGGTAACCGAGGAAGCTCAAAGAGCGGTAACAAGGATAAGTATAAGTGCTTTAAGTGTCACAAGTTTGGTCACTTCAAGAGGGATTGTCCGGAGGACAATGAGAACTCCGCACAAGTTGTGTCCGAGGAGTATGAGGATGCGGGTGCTTTGGTGGTGAGTTGTTGGGAGGATGAAGGTGAGGTTTCTCACCTTGGGTGTCCAATCGTGACACGATTTTGGGAAAACGTGACACGATTTTCGGCTTGCTGGGCAAGTTTTGAGGATAAGGTTGGTCGTACCTTGGGTTGTACGCACCAAACGTGTCATGATTTGGGAAAACGTGACACGATTTTGACGAACAAACTACAACACTTGTCACAAGGGGCCAATTCAAAGATGGGGGGAAGTGTTAGTGTTAGCAAGAAAAATGAGATGAAGTATCCACAAAAATATGTAATGAATTTGAAAGAGAAAGTGAGACTTCTACAAGAAGAAATAAAGGAGATAATGTGTGATAGGGAGAAAGAGAGTAGGAACTATGAGAGGGAGATAATGGTGTTTGCTTTTAAGGAGGCAGATTGGAAACAAGAGGTGAAGAGGTTGAAAGAAGAGGTGAAGCAGTTGAGGGAAGTGGTGGAAGAGAAGGAAGAGAAGATAAGGGAGATGGAAGAGGTTGGAATGGTTGAGAAGAATTGTGAGAAAGAGTGGGAATTAATGGGGACTAAGCTTTTGGTTCAAGAGATGAAGGAGGAAAGAGCAAGGAGAGATGAAGCTGTTGAGAAGTGGAAACAACTTTATCTTGCAATTAAGAATGAGTTGGATGATCTCATCCAAAGAACATATGATGGAGATGGTTTGTATTGGAAAGCTGAGGAAAATGACATACAAATTGAAAATCTGAAGAGGGAATTGCAAGAGAAAGAAGAAAGCATAAAAGCTTTAAAAGCTCAATTAGGTTCAGTGGAGAAAGAAAGGTACAAACAAGAAAGGGAATTTGACTTGTTAAGGCAAAGTTTGAGGATCATGAATGGCAAGAAGAATCCAATTCAAACTAAAGAGAAGAAGAAGTTGAAAATCAAATTGGGAAAATAA

Protein sequence

>MsG0180001892.01.T01

MGSKWDIEKFTGSNDFGLWKVKMQAVLIQQKCEKALKGEGALPVTMTQAEKTEMVDKARSAIVLCLGDKVLRDVAKEPTAASMWSKLESLYMTKSLAHRQFLKQQLYSFKMVESKTVMEQLTEFNKILDDLENIEVNLEDEDKAILLLCALPRSFESFKDTMLYGKEDTVTLEEVQAALRTKELTKSKDLRADENSEGLSVSRGNGGGRGNRGSSKSGNKDKYKCFKCHKFGHFKRDCPEDNENSAQVVSEEYEDAGALVVSCWEDEGEVSHLGCPIVTRFWENVTRFSACWASFEDKVGRTLGCTHQTCHDLGKRDTILTNKLQHLSQGANSKMGGSVSVSKKNEMKYPQKYVMNLKEKVRLLQEEIKEIMCDREKESRNYEREIMVFAFKEADWKQEVKRLKEEVKQLREVVEEKEEKIREMEEVGMVEKNCEKEWELMGTKLLVQEMKEERARRDEAVEKWKQLYLAIKNELDDLIQRTYDGDGLYWKAEENDIQIENLKRELQEKEESIKALKAQLGSVEKERYKQEREFDLLRQSLRIMNGKKNPIQTKEKKKLKIKLGK*