AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480019901.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019901.01.T01 MTR_0005s0130 88.552 725 18 8 1 719 1 666 0.0 1279
MsG0480019901.01.T01 MTR_4g043660 88.552 725 18 8 1 719 1 666 0.0 1279
MsG0480019901.01.T01 MTR_3g436060 58.885 771 195 24 1 719 1 701 0.0 737
MsG0480019901.01.T01 MTR_5g008900 38.667 750 325 24 1 685 1 680 6.64e-128 395
MsG0480019901.01.T01 MTR_5g094700 33.333 438 238 12 1 406 1 416 7.23e-54 194
MsG0480019901.01.T01 MTR_3g056160 33.703 451 196 11 1 406 1 393 5.50e-52 189
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019901.01.T01 AT3G51950 39.890 727 242 25 1 719 1 540 3.29e-128 391
MsG0480019901.01.T01 AT3G51950 39.890 727 242 25 1 719 1 540 3.29e-128 391
MsG0480019901.01.T01 AT3G51950 39.890 727 242 25 1 719 1 540 3.29e-128 391
MsG0480019901.01.T01 AT3G51950 39.890 727 242 25 1 719 1 540 3.29e-128 391
MsG0480019901.01.T01 AT3G21100 36.988 684 282 27 1 647 1 572 4.38e-99 318
MsG0480019901.01.T01 AT3G21100 36.988 684 282 27 1 647 1 572 4.38e-99 318
MsG0480019901.01.T01 AT3G21100 37.281 684 281 28 1 647 1 573 2.16e-98 316
MsG0480019901.01.T01 AT3G21100 37.281 684 281 28 1 647 1 573 2.16e-98 316
MsG0480019901.01.T01 AT5G12440 41.514 436 163 15 130 539 160 529 7.91e-87 286
MsG0480019901.01.T01 AT5G12440 41.514 436 163 15 130 539 160 529 7.91e-87 286
MsG0480019901.01.T01 AT5G12440 41.514 436 163 15 130 539 160 529 7.91e-87 286
MsG0480019901.01.T01 AT5G12440 41.514 436 163 15 130 539 160 529 7.91e-87 286
MsG0480019901.01.T01 AT5G12440 41.514 436 163 15 130 539 160 529 7.91e-87 286
MsG0480019901.01.T01 AT5G12440 41.514 436 163 15 130 539 160 529 7.91e-87 286
MsG0480019901.01.T01 AT5G12440 41.514 436 163 15 130 539 160 529 7.91e-87 286
MsG0480019901.01.T01 AT5G12440 41.514 436 163 15 130 539 191 560 1.56e-86 286
MsG0480019901.01.T01 AT5G12440 41.514 436 163 15 130 539 191 560 1.56e-86 286
MsG0480019901.01.T01 AT5G12440 41.514 436 163 15 130 539 191 560 1.56e-86 286
MsG0480019901.01.T01 AT5G12440 41.514 436 163 15 130 539 191 560 1.56e-86 286
MsG0480019901.01.T01 AT5G12440 41.514 436 163 15 130 539 191 560 1.56e-86 286
MsG0480019901.01.T01 AT3G63450 61.494 174 45 5 233 406 86 237 2.09e-56 198
MsG0480019901.01.T01 AT3G63450 61.111 72 28 0 1 72 1 72 3.58e-19 90.9
MsG0480019901.01.T01 AT3G63450 61.494 174 45 5 233 406 86 237 2.09e-56 198
MsG0480019901.01.T01 AT3G63450 61.111 72 28 0 1 72 1 72 3.58e-19 90.9
MsG0480019901.01.T01 AT3G63450 61.494 174 45 5 233 406 86 237 2.38e-56 198
MsG0480019901.01.T01 AT3G63450 61.111 72 28 0 1 72 1 72 3.71e-19 90.9
MsG0480019901.01.T01 AT3G63450 61.494 174 45 5 233 406 86 237 2.38e-56 198
MsG0480019901.01.T01 AT3G63450 61.111 72 28 0 1 72 1 72 3.71e-19 90.9
MsG0480019901.01.T01 AT3G63450 61.494 174 45 5 233 406 86 237 2.38e-56 198
MsG0480019901.01.T01 AT3G63450 61.111 72 28 0 1 72 1 72 3.71e-19 90.9
MsG0480019901.01.T01 AT3G63450 61.494 174 45 5 233 406 86 237 4.04e-56 196
MsG0480019901.01.T01 AT3G63450 61.111 72 28 0 1 72 1 72 2.04e-19 91.3
MsG0480019901.01.T01 AT1G51520 31.758 529 235 21 1 518 1 414 1.39e-55 196
MsG0480019901.01.T01 AT1G51520 29.565 690 296 28 1 678 1 512 6.79e-55 197
MsG0480019901.01.T01 AT3G63450 76.271 118 23 1 289 406 17 129 2.32e-54 189
MsG0480019901.01.T01 AT2G05160 34.368 451 203 15 1 408 1 401 6.71e-51 185
MsG0480019901.01.T01 AT2G05160 34.146 451 204 15 1 408 1 401 1.12e-50 186
MsG0480019901.01.T01 AT2G05160 34.146 451 204 15 1 408 1 401 1.12e-50 186
MsG0480019901.01.T01 AT3G52980 33.085 402 210 15 1 382 1 363 1.43e-38 147

Find 223 sgRNAs with CRISPR-Local

Find 355 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAAACACAATGGCTTATT+TGG 0.135566 4:+29314714 None:intergenic
CCAGTTTGAGTGGGCTAATT+TGG 0.138350 4:-29312649 MsG0480019901.01.T01:CDS
CATATATTGGATTAAGAATA+TGG 0.180115 4:-29314630 MsG0480019901.01.T01:intron
AACTTCAGCTTCTCTTGATA+TGG 0.183404 4:-29311409 MsG0480019901.01.T01:CDS
AATGAGGAGTTGCACAAATT+TGG 0.207039 4:-29313208 MsG0480019901.01.T01:CDS
TATCCTTTCATTTCATATAT+TGG 0.224654 4:-29314643 MsG0480019901.01.T01:five_prime_UTR
GGTGATGGTGTTGGCATCTT+TGG 0.252432 4:+29310699 None:intergenic
GGTAATTGGCAGTTATTATA+TGG 0.254267 4:+29311375 None:intergenic
GGTGCAATAACTTACTTATC+TGG 0.260574 4:+29312784 None:intergenic
AAAAGGAAATTCATGCCTTT+TGG 0.282854 4:+29313386 None:intergenic
CTGACAGGTGTCCTGCAAAA+TGG 0.283445 4:+29309667 None:intergenic
TTCTGATCCTTCATATGGTT+GGG 0.287354 4:-29313729 MsG0480019901.01.T01:CDS
CACACAAAGGTATTATTATT+AGG 0.288861 4:-29310516 MsG0480019901.01.T01:three_prime_UTR
CTTCATAACCATCCATGATT+TGG 0.292152 4:+29314191 None:intergenic
TCATGTTAACTTGTGCCTTT+AGG 0.295580 4:-29309881 MsG0480019901.01.T01:three_prime_UTR
AAAGAAACTTTACTTGTAAT+AGG 0.300194 4:-29314292 MsG0480019901.01.T01:five_prime_UTR
GTTTCAAAACCATGATGATT+TGG 0.301307 4:-29313819 MsG0480019901.01.T01:CDS
TAACCATCCCAAACCCTTCT+TGG 0.303956 4:-29313871 MsG0480019901.01.T01:CDS
TCTTCTGCCCATGGAACTAT+TGG 0.306365 4:-29311244 MsG0480019901.01.T01:CDS
AAGATGTTTCCGAATACTTC+AGG 0.317374 4:-29313072 MsG0480019901.01.T01:intron
GATTCAACGTAGGAGGTTAA+TGG 0.322041 4:-29312258 MsG0480019901.01.T01:CDS
GATGCTTCTGCTGCAATTGT+TGG 0.328859 4:-29313548 MsG0480019901.01.T01:CDS
TGCCAGGTTGTGTTTGTGTA+TGG 0.336362 4:-29309966 MsG0480019901.01.T01:three_prime_UTR
GTACAAAGGACTTGAAATTA+TGG 0.336774 4:+29310472 None:intergenic
GAGGATCCAAGTGCTGGTTT+AGG 0.351353 4:-29313641 MsG0480019901.01.T01:CDS
AAAATGTCCTTCACCGTCTC+TGG 0.353780 4:+29312880 None:intergenic
ACATCTACTAGCTCTAAATT+TGG 0.353969 4:-29311450 MsG0480019901.01.T01:CDS
GGAACTATTGGGATGTTTGC+CGG 0.357443 4:-29311232 MsG0480019901.01.T01:CDS
AATGATGCTTCTTATTTAGC+TGG 0.358770 4:-29313668 MsG0480019901.01.T01:CDS
ATGATTCATGTGGTTTGTAT+AGG 0.362197 4:-29312536 MsG0480019901.01.T01:CDS
CTAAATAAACCTGAAGTATT+CGG 0.364140 4:+29313063 None:intergenic
CAACTTTCTTTCTTGAATGA+TGG 0.364655 4:-29313752 MsG0480019901.01.T01:CDS
CTTCACCTAATTTCCTTTCA+AGG 0.369048 4:-29313949 MsG0480019901.01.T01:CDS
CTTCTGCCCATGGAACTATT+GGG 0.370221 4:-29311243 MsG0480019901.01.T01:CDS
ACTAGTTGTAGGTTTCTTCA+TGG 0.371986 4:-29313572 MsG0480019901.01.T01:CDS
CCAAATTAGCCCACTCAAAC+TGG 0.377625 4:+29312649 None:intergenic
ATTCAACGTAGGAGGTTAAT+GGG 0.383287 4:-29312257 MsG0480019901.01.T01:CDS
GGGGAAGCAAAAGGGCTATC+AGG 0.385669 4:+29311540 None:intergenic
TTCAAAGCTAGAAAAGAGTT+AGG 0.385736 4:-29314022 MsG0480019901.01.T01:CDS
TCACCGTGTCGCACTCCAAC+TGG 0.388538 4:-29312486 MsG0480019901.01.T01:CDS
TTAGTAGGTCCCTTCTCTAA+TGG 0.390520 4:-29311498 MsG0480019901.01.T01:CDS
TTTCAAGTCCTTTGTACAGC+TGG 0.394869 4:-29310466 MsG0480019901.01.T01:three_prime_UTR
TGCAAAACAAGGCGGTGGTT+TGG 0.397401 4:-29314757 MsG0480019901.01.T01:five_prime_UTR
AAAATTCATCAACTTCTTCA+AGG 0.400418 4:-29313925 MsG0480019901.01.T01:CDS
ACTGAATGAATAAGTGATTC+AGG 0.400741 4:+29314049 None:intergenic
ATGCTTCTGCTGCAATTGTT+GGG 0.402017 4:-29313547 MsG0480019901.01.T01:CDS
CCATTGTGTTTGTTTGTTTG+AGG 0.403765 4:-29314705 MsG0480019901.01.T01:five_prime_UTR
TGAAAATGCATCAAATATCA+TGG 0.407202 4:-29314128 MsG0480019901.01.T01:CDS
AGATTCTGATCGAACATGTT+AGG 0.417465 4:+29312155 None:intergenic
TCCTCTTCATGACTTGAGCT+TGG 0.419998 4:+29311833 None:intergenic
ATCTTCTCATCAACAAAGAT+TGG 0.420103 4:-29313462 MsG0480019901.01.T01:CDS
GTTCTGATCCTTCATATGGT+TGG 0.420579 4:-29313730 MsG0480019901.01.T01:CDS
TACCAGCAGAAGCGTATGTT+TGG 0.422823 4:-29312922 MsG0480019901.01.T01:CDS
AACCATGATGATTTGGTTGT+TGG 0.425653 4:-29313812 MsG0480019901.01.T01:CDS
ACCAATCGGTCCACCGGTGC+CGG 0.425894 4:+29311213 None:intergenic
AAGAAAGTTGGTCTTGGAGT+TGG 0.426471 4:+29313765 None:intergenic
AAGTAGATTTGTCTTGAAGC+TGG 0.427274 4:+29313127 None:intergenic
TCTGAATCAATGGTCTCTAA+TGG 0.428441 4:+29311474 None:intergenic
AGGAGCTTAATTTGCATGAA+TGG 0.429817 4:-29311814 MsG0480019901.01.T01:intron
TAGCTACCCAAGAAGGGTTT+GGG 0.430474 4:+29313864 None:intergenic
AACATACGCTTCTGCTGGTA+TGG 0.433918 4:+29312925 None:intergenic
ACTTCAGCTTCTCTTGATAT+GGG 0.434350 4:-29311408 MsG0480019901.01.T01:CDS
GATGGCAGTACCTTGGTAAT+TGG 0.438358 4:+29311361 None:intergenic
TAGGAAGCAGCTTCAGCAGC+AGG 0.440486 4:-29312517 MsG0480019901.01.T01:CDS
TGACAGGTGTCCTGCAAAAT+GGG 0.441127 4:+29309668 None:intergenic
TCAAGAAAGAAAGTTGGTCT+TGG 0.441160 4:+29313759 None:intergenic
TTGAAAGGGAAAATAATTGC+AGG 0.441590 4:+29310118 None:intergenic
GCCAGGTTGTGTTTGTGTAT+GGG 0.446064 4:-29309965 MsG0480019901.01.T01:three_prime_UTR
AACCATCCCAAACCCTTCTT+GGG 0.448617 4:-29313870 MsG0480019901.01.T01:CDS
AGACACGGTGGCGTTTAGCC+TGG 0.449214 4:-29309724 MsG0480019901.01.T01:three_prime_UTR
TTCTCAGACTCGATTATCTT+CGG 0.449452 4:-29312674 MsG0480019901.01.T01:intron
TGGTAGGTAGGGTTTATTTG+TGG 0.451555 4:-29314320 MsG0480019901.01.T01:five_prime_UTR
TGGAGTTGGAAATCATCAAT+TGG 0.455092 4:+29313779 None:intergenic
TGCTGCTGCTTCTCAACTCA+TGG 0.455822 4:-29313432 MsG0480019901.01.T01:CDS
ATACATATTTATATATTGCC+AGG 0.461145 4:-29309982 MsG0480019901.01.T01:three_prime_UTR
GATGGTGTTGGCATCTTTGG+TGG 0.461897 4:+29310702 None:intergenic
GTAGCTACCCAAGAAGGGTT+TGG 0.462332 4:+29313863 None:intergenic
TGCACAAATTTGGAAGATCA+AGG 0.462736 4:-29313198 MsG0480019901.01.T01:CDS
GAATAAACGCAGTTTGGAGT+TGG 0.464190 4:-29311574 MsG0480019901.01.T01:intron
AGGAGAATGGACTAGACTTC+CGG 0.464529 4:+29312187 None:intergenic
TTTGGGATGGTTAGAGAAGG+TGG 0.466291 4:+29313881 None:intergenic
TGCAATTTACAACATTGAAA+AGG 0.467476 4:+29312589 None:intergenic
GATGGTTCTGATCCTTCATA+TGG 0.468864 4:-29313734 MsG0480019901.01.T01:CDS
TGGCAATATATAAATATGTA+TGG 0.471821 4:+29309984 None:intergenic
GGGATGTTTGCCGGCACCGG+TGG 0.476292 4:-29311223 MsG0480019901.01.T01:CDS
CAATCAATCAACGGTTATGT+TGG 0.476427 4:-29311914 MsG0480019901.01.T01:CDS
GAAGGTGATGGAGGAGTTGA+AGG 0.476556 4:+29313968 None:intergenic
GAGGTAATTCTTCTCTTCAT+AGG 0.476864 4:-29313706 MsG0480019901.01.T01:CDS
GGAAAATACTCGCCATTCCC+AGG 0.477237 4:+29309706 None:intergenic
AGTATAGTATTGATGATTGA+TGG 0.480918 4:+29310678 None:intergenic
TAGGAGATTGAGTAGGAGAA+TGG 0.481381 4:+29312174 None:intergenic
CATGATGATTTGGTTGTTGG+TGG 0.482251 4:-29313809 MsG0480019901.01.T01:CDS
CATTGTGTTTGTTTGTTTGA+GGG 0.482585 4:-29314704 MsG0480019901.01.T01:five_prime_UTR
TCTCTGAAAGTACTATCAGC+TGG 0.483478 4:+29313097 None:intergenic
TCTGATCCTTCATATGGTTG+GGG 0.483566 4:-29313728 MsG0480019901.01.T01:CDS
GGAATCCTCACATCTTGAAC+AGG 0.483680 4:+29312946 None:intergenic
CTCAGTAGTTACTGCCCCAC+AGG 0.484969 4:-29310560 MsG0480019901.01.T01:three_prime_UTR
TCTTTCCTTTGCTCACCAAA+AGG 0.487823 4:-29313401 MsG0480019901.01.T01:CDS
GCTTCCCCTACAAAAGCTGC+TGG 0.488294 4:-29311525 MsG0480019901.01.T01:CDS
ATTGGGATGTTTGCCGGCAC+CGG 0.489063 4:-29311226 MsG0480019901.01.T01:CDS
TAACAAGATTGAAAATATGA+TGG 0.492689 4:-29313519 MsG0480019901.01.T01:CDS
TTCAGTAAAGGAAGTGGGGC+AGG 0.493411 4:-29310617 MsG0480019901.01.T01:three_prime_UTR
AGTAGATTTGTCTTGAAGCT+GGG 0.493765 4:+29313128 None:intergenic
CTTTGAGACATAAGTTAAGA+AGG 0.494182 4:+29309745 None:intergenic
GTGCAATAACTTACTTATCT+GGG 0.495777 4:+29312785 None:intergenic
GGTTCTGAGGATCCAAGTGC+TGG 0.496209 4:-29313647 MsG0480019901.01.T01:CDS
AGTAATGCTTCAGTTTCTGC+TGG 0.501975 4:-29311941 MsG0480019901.01.T01:CDS
ACTTCTTCAAGGCTTAGTAC+TGG 0.503797 4:-29313914 MsG0480019901.01.T01:CDS
GTGTTGGTCAATGGTGAGAA+TGG 0.508506 4:-29311884 MsG0480019901.01.T01:CDS
AGTAGATGTATCTGAATCAA+TGG 0.508605 4:+29311464 None:intergenic
GCCGGCACCGGTGGACCGAT+TGG 0.509573 4:-29311214 MsG0480019901.01.T01:CDS
ACAGGAAAATGAAGCAAAGA+TGG 0.512277 4:-29310778 MsG0480019901.01.T01:intron
ATGGGTAGGTGCTGGTTGGT+AGG 0.516368 4:+29309941 None:intergenic
CAAACATCCCAATAGTTCCA+TGG 0.516522 4:+29311236 None:intergenic
TGTTAAGCCTTACAAGGAGA+AGG 0.518187 4:-29312815 MsG0480019901.01.T01:CDS
TCACTCACATGGGTAGGTGC+TGG 0.519932 4:+29309933 None:intergenic
GGTGTTGGCATCTTTGGTGG+TGG 0.520609 4:+29310705 None:intergenic
CGAGCCTCACAAACAAAATG+AGG 0.520727 4:+29312844 None:intergenic
AGTACTTGTTAAGCCTTACA+AGG 0.523363 4:-29312821 MsG0480019901.01.T01:CDS
ATTTGTGTATAAAATGTAGT+GGG 0.523395 4:-29310096 MsG0480019901.01.T01:three_prime_UTR
ATCTTCGGTACCAGTTTGAG+TGG 0.530138 4:-29312659 MsG0480019901.01.T01:CDS
CTCTAATGGTCCATTAGAGA+AGG 0.531820 4:+29311488 None:intergenic
TAGGAAGTAGCTCCTTTCAC+AGG 0.535965 4:-29310497 MsG0480019901.01.T01:three_prime_UTR
CTCTGAAAGTACTATCAGCT+GGG 0.538342 4:+29313098 None:intergenic
GACACGGTGGCGTTTAGCCT+GGG 0.539513 4:-29309723 MsG0480019901.01.T01:three_prime_UTR
CCTTCTGCAAAACAAGGCGG+TGG 0.541998 4:-29314762 MsG0480019901.01.T01:five_prime_UTR
TTCTTGAACCAAATCATGGA+TGG 0.542653 4:-29314199 MsG0480019901.01.T01:exon
CTCTTGAGATTCAACGTAGG+AGG 0.543490 4:-29312265 MsG0480019901.01.T01:CDS
GAAATTATGGTACCTGTGAA+AGG 0.544287 4:+29310485 None:intergenic
AAAGCTGCTGGAGACTTAGT+AGG 0.544349 4:-29311513 MsG0480019901.01.T01:CDS
GGAGGAGTTGAAGGTGTTGG+TGG 0.544429 4:+29313977 None:intergenic
ATAGTAGTAGCTACCCAAGA+AGG 0.546177 4:+29313857 None:intergenic
ATGATTGATGGTGATGGTGT+TGG 0.548035 4:+29310690 None:intergenic
GGATGGTTAGAGAAGGTGGA+AGG 0.550377 4:+29313885 None:intergenic
GCAGTTTCAGTAAAGGAAGT+GGG 0.551076 4:-29310622 MsG0480019901.01.T01:three_prime_UTR
TTCTTATTTAGCTGGTTCTG+AGG 0.551260 4:-29313660 MsG0480019901.01.T01:CDS
AATTTGTGTATAAAATGTAG+TGG 0.551566 4:-29310097 MsG0480019901.01.T01:three_prime_UTR
CTGAAGACATGTTGTGGAGG+AGG 0.552660 4:-29312316 MsG0480019901.01.T01:CDS
AGCCAAACATACGCTTCTGC+TGG 0.552768 4:+29312920 None:intergenic
CCACAAAACATAACATCACA+TGG 0.552929 4:-29310029 MsG0480019901.01.T01:three_prime_UTR
CATCATTCAAGAAAGAAAGT+TGG 0.553431 4:+29313753 None:intergenic
GGTGGAGAGTTATTAGAACA+AGG 0.554052 4:+29313995 None:intergenic
ATCCAAGTGCTGGTTTAGGA+TGG 0.555461 4:-29313637 MsG0480019901.01.T01:CDS
AAATTAGGTGAAGGTGATGG+AGG 0.557722 4:+29313959 None:intergenic
CTGAAACATAATATTATCAA+AGG 0.559533 4:+29310274 None:intergenic
CAGGAAAACTAGATACCAAT+CGG 0.560468 4:+29311199 None:intergenic
GCCAAGCTCAAGTCATGAAG+AGG 0.563642 4:-29311834 MsG0480019901.01.T01:CDS
AGCAGTTTCAGTAAAGGAAG+TGG 0.564046 4:-29310623 MsG0480019901.01.T01:three_prime_UTR
GAAAATGCATCAAATATCAT+GGG 0.565223 4:-29314127 MsG0480019901.01.T01:CDS
TACCAAGTTGAAGATCATAC+TGG 0.565581 4:+29312445 None:intergenic
GACCAGTATGATCTTCAACT+TGG 0.566045 4:-29312447 MsG0480019901.01.T01:intron
GATGGAGGAGTTGAAGGTGT+TGG 0.569843 4:+29313974 None:intergenic
GATGGGGCAGTATAAGTGAA+TGG 0.570987 4:-29314798 None:intergenic
CACCAACGTGCACTTTCCAC+CGG 0.572559 4:-29312206 MsG0480019901.01.T01:CDS
TTATGTTGGCAAGGAAGTGT+TGG 0.572886 4:-29311900 MsG0480019901.01.T01:CDS
TTGGTCCTGTTCAAGATGTG+AGG 0.573377 4:-29312951 MsG0480019901.01.T01:CDS
AAAAGCATGCACATATGAAG+TGG 0.573833 4:-29310424 MsG0480019901.01.T01:three_prime_UTR
TTACCTCCCCAACCATATGA+AGG 0.573835 4:+29313722 None:intergenic
GTTAAGCCTTACAAGGAGAA+GGG 0.574645 4:-29312814 MsG0480019901.01.T01:CDS
AATCCAATATATGAAATGAA+AGG 0.574818 4:+29314640 None:intergenic
CTAGATACCAATCGGTCCAC+CGG 0.575012 4:+29311207 None:intergenic
CTAGCATCAACAAGTCCAGT+TGG 0.578010 4:+29312471 None:intergenic
ATGGTATCACTCACATGGGT+AGG 0.578843 4:+29309927 None:intergenic
GGCAAGGAAGTGTTGGTCAA+TGG 0.579051 4:-29311893 MsG0480019901.01.T01:CDS
AGACATGTTGTGGAGGAGGA+AGG 0.581194 4:-29312312 MsG0480019901.01.T01:CDS
ACCCATACACAAACACAACC+TGG 0.581852 4:+29309964 None:intergenic
AAACATCCCAATAGTTCCAT+GGG 0.583735 4:+29311237 None:intergenic
TCACATGGGTAGGTGCTGGT+TGG 0.584741 4:+29309937 None:intergenic
ATTGTGTTTGTTTGTTTGAG+GGG 0.584890 4:-29314703 MsG0480019901.01.T01:five_prime_UTR
GGGTTTGGGATGGTTAGAGA+AGG 0.586472 4:+29313878 None:intergenic
ATATCAAGAGAAGCTGAAGT+TGG 0.586830 4:+29311411 None:intergenic
CACCAACAACCAAATCATCA+TGG 0.590260 4:+29313810 None:intergenic
AATGGGAGCTTTCCCATGGT+GGG 0.590746 4:+29309685 None:intergenic
TTCCATCCTAAACCAGCACT+TGG 0.596178 4:+29313635 None:intergenic
AAGCTCACAATAGTAGCAAG+AGG 0.597653 4:+29310173 None:intergenic
ATAACACTGAAGACATGTTG+TGG 0.597721 4:-29312322 MsG0480019901.01.T01:CDS
AAAATCAAAATGATACTCAA+AGG 0.597880 4:-29313352 MsG0480019901.01.T01:intron
AATCAACGGTTATGTTGGCA+AGG 0.598412 4:-29311909 MsG0480019901.01.T01:CDS
TTGCTTCTTAGTAAAGAGCA+TGG 0.599243 4:-29314103 MsG0480019901.01.T01:CDS
CCTCTTGCAAAATAAAGACA+TGG 0.600057 4:+29313611 None:intergenic
GATCCTTCATATGGTTGGGG+AGG 0.600288 4:-29313725 MsG0480019901.01.T01:CDS
TGCAGCTTTAATGATGAATG+AGG 0.607606 4:-29313224 MsG0480019901.01.T01:CDS
AGGAAATTAGGTGAAGGTGA+TGG 0.608102 4:+29313956 None:intergenic
AATATATGGTATCACTCACA+TGG 0.610202 4:+29309922 None:intergenic
GGTGGCGTTTAGCCTGGGAA+TGG 0.610748 4:-29309718 MsG0480019901.01.T01:three_prime_UTR
GCAAAATGGGAGCTTTCCCA+TGG 0.611046 4:+29309681 None:intergenic
CTTGAAAGGAAATTAGGTGA+AGG 0.619146 4:+29313950 None:intergenic
TCTTCGGTACCAGTTTGAGT+GGG 0.619617 4:-29312658 MsG0480019901.01.T01:CDS
AAATGGGAGCTTTCCCATGG+TGG 0.619658 4:+29309684 None:intergenic
TACCCAAGAAGGGTTTGGGA+TGG 0.619888 4:+29313868 None:intergenic
TGGTTATGAAGCAACTAAGA+TGG 0.623405 4:-29314179 MsG0480019901.01.T01:CDS
AGGAAGCAGCTTCAGCAGCA+GGG 0.623572 4:-29312516 MsG0480019901.01.T01:CDS
ATAATGCTCCAGCTGTACAA+AGG 0.623606 4:+29310458 None:intergenic
CACAAAACATAACATCACAT+GGG 0.629690 4:-29310028 MsG0480019901.01.T01:three_prime_UTR
TCTAATGGTCCATTAGAGAA+GGG 0.630191 4:+29311489 None:intergenic
TAGTAGTAGCTACCCAAGAA+GGG 0.633677 4:+29313858 None:intergenic
TATGCTCATCATGATTCATG+TGG 0.635403 4:-29312546 MsG0480019901.01.T01:CDS
ACTGCTCCTTCTGCAAAACA+AGG 0.635900 4:-29314768 MsG0480019901.01.T01:five_prime_UTR
CAGTTTCAGTAAAGGAAGTG+GGG 0.640959 4:-29310621 MsG0480019901.01.T01:three_prime_UTR
AGAAGCTCAGAGTTCCCAGA+GGG 0.641268 4:-29312113 MsG0480019901.01.T01:intron
TAGAAGCTCAGAGTTCCCAG+AGG 0.649309 4:-29312114 MsG0480019901.01.T01:CDS
GGGGTTGCTGACATTGCAAG+TGG 0.651516 4:-29310008 MsG0480019901.01.T01:three_prime_UTR
ATAATAACTGCCAATTACCA+AGG 0.653801 4:-29311371 MsG0480019901.01.T01:intron
GCTGGGTTAATCATTCCAGT+AGG 0.658453 4:+29313145 None:intergenic
GAGCCTCACAAACAAAATGA+GGG 0.658530 4:+29312845 None:intergenic
TCTGAGCTTCTACGAAACGA+AGG 0.664963 4:+29312125 None:intergenic
AGTCCAGTTGGAGTGCGACA+CGG 0.665479 4:+29312483 None:intergenic
GCTGGTCAACAATCAATCAA+CGG 0.670136 4:-29311923 MsG0480019901.01.T01:CDS
AGAATGGACTAGACTTCCGG+TGG 0.670680 4:+29312190 None:intergenic
TAACTTATGTCTCAAAGACA+CGG 0.671519 4:-29309739 MsG0480019901.01.T01:three_prime_UTR
GTATTGATGATTGATGGTGA+TGG 0.677453 4:+29310684 None:intergenic
ACACTGAAGACATGTTGTGG+AGG 0.682283 4:-29312319 MsG0480019901.01.T01:CDS
ATATATGGTATCACTCACAT+GGG 0.689252 4:+29309923 None:intergenic
CCTCAAACAAACAAACACAA+TGG 0.692546 4:+29314705 None:intergenic
ACAAAACATAACATCACATG+GGG 0.699274 4:-29310027 MsG0480019901.01.T01:three_prime_UTR
TTCAACGTAGGAGGTTAATG+GGG 0.699821 4:-29312256 MsG0480019901.01.T01:CDS
AGCTGATAGTACTTTCAGAG+AGG 0.701721 4:-29313095 MsG0480019901.01.T01:CDS
GGGTTGCTGACATTGCAAGT+GGG 0.717320 4:-29310007 MsG0480019901.01.T01:three_prime_UTR
GCTCCTTCTGCAAAACAAGG+CGG 0.720204 4:-29314765 MsG0480019901.01.T01:five_prime_UTR
TTCCGGTGGAAAGTGCACGT+TGG 0.732492 4:+29312204 None:intergenic
AACATGTTAGGAGATTGAGT+AGG 0.740499 4:+29312167 None:intergenic
AAGCTCTTGAGATTCAACGT+AGG 0.757112 4:-29312268 MsG0480019901.01.T01:CDS
CTTATGTCTCAAAGACACGG+TGG 0.811371 4:-29309736 MsG0480019901.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAAATATAAATATA+TGG + Chr4:29314536-29314555 None:intergenic 0.0%
!!! ATATTTATATTTTATTTTTA+AGG - Chr4:29314537-29314556 MsG0480019901.01.T01:intron 0.0%
!! AAAATTTCAACAAAAATTAT+AGG + Chr4:29313140-29313159 None:intergenic 10.0%
!! ATAATAATGTAATAATTACA+GGG - Chr4:29311187-29311206 MsG0480019901.01.T01:intron 10.0%
!!! TATAATTTTTGTTGAAATTT+TGG - Chr4:29313139-29313158 MsG0480019901.01.T01:CDS 10.0%
!!! TATATTTTGTTTTTCTATTA+AGG - Chr4:29310194-29310213 MsG0480019901.01.T01:three_prime_UTR 10.0%
!!! TTTTTTTTTTGTTTTGTTTT+TGG - Chr4:29309850-29309869 MsG0480019901.01.T01:three_prime_UTR 10.0%
!! AAAAATTAAATAACACACAA+AGG - Chr4:29313912-29313931 MsG0480019901.01.T01:CDS 15.0%
!! GATAATAATGTAATAATTAC+AGG - Chr4:29311186-29311205 MsG0480019901.01.T01:intron 15.0%
!! TACTTAATGTAAATGAAAAT+AGG + Chr4:29312660-29312679 None:intergenic 15.0%
!!! AATTTTTTTTTTTTACCTGT+GGG + Chr4:29313899-29313918 None:intergenic 15.0%
!!! ATTTTAATTGATTTGGAATT+TGG - Chr4:29313164-29313183 MsG0480019901.01.T01:CDS 15.0%
!!! ATTTTATACACAAATTGAAA+GGG + Chr4:29314340-29314359 None:intergenic 15.0%
!!! CTTATTATTTTCATATATGA+AGG - Chr4:29313540-29313559 MsG0480019901.01.T01:CDS 15.0%
!!! GTATTTTTAGACTTAAAAAT+TGG - Chr4:29314237-29314256 MsG0480019901.01.T01:five_prime_UTR 15.0%
!!! GTTTTATTAAATTTAGAAGT+CGG - Chr4:29313615-29313634 MsG0480019901.01.T01:CDS 15.0%
!!! TAATTTTTTTGAAGCAAATT+TGG - Chr4:29311471-29311490 MsG0480019901.01.T01:CDS 15.0%
!!! TAATTTTTTTTTTTTACCTG+TGG + Chr4:29313900-29313919 None:intergenic 15.0%
!!! TGATTGTCATTTAAATTAAA+GGG - Chr4:29312822-29312841 MsG0480019901.01.T01:CDS 15.0%
!!! TTGATTGTCATTTAAATTAA+AGG - Chr4:29312821-29312840 MsG0480019901.01.T01:CDS 15.0%
!!! TTTGGAAATTTTAATTGATT+TGG - Chr4:29313157-29313176 MsG0480019901.01.T01:CDS 15.0%
!! AAAACTTCTAATAGTGTAAT+AGG - Chr4:29312679-29312698 MsG0480019901.01.T01:intron 20.0%
!! AAAATAAAAAAAATACCCTC+TGG + Chr4:29312346-29312365 None:intergenic 20.0%
!! AAAATCAAAATGATACTCAA+AGG - Chr4:29311089-29311108 MsG0480019901.01.T01:intron 20.0%
!! AAACTTCTAATAGTGTAATA+GGG - Chr4:29312680-29312699 MsG0480019901.01.T01:intron 20.0%
!! AAAGAAACTTTACTTGTAAT+AGG - Chr4:29310149-29310168 MsG0480019901.01.T01:three_prime_UTR 20.0%
!! AAAGTTAAAGAAGAAGAAAA+AGG + Chr4:29310040-29310059 None:intergenic 20.0%
!! AAATAAAAAAAATACCCTCT+GGG + Chr4:29312345-29312364 None:intergenic 20.0%
!! AAGATAAATCACATATTAAG+AGG + Chr4:29312069-29312088 None:intergenic 20.0%
!! AATAAGAGAGAAAAAAAGAA+AGG + Chr4:29309963-29309982 None:intergenic 20.0%
!! AATCCAATATATGAAATGAA+AGG + Chr4:29309804-29309823 None:intergenic 20.0%
!! AATTTGTGTATAAAATGTAG+TGG - Chr4:29314344-29314363 MsG0480019901.01.T01:five_prime_UTR 20.0%
!! AGAAAAAGAAAGAAAAGAAA+TGG + Chr4:29313850-29313869 None:intergenic 20.0%
!! ATACATATTTATATATTGCC+AGG - Chr4:29314459-29314478 MsG0480019901.01.T01:intron 20.0%
!! ATGAAAAATTGTTACAACAA+CGG - Chr4:29313428-29313447 MsG0480019901.01.T01:CDS 20.0%
!! ATTTGTGTATAAAATGTAGT+GGG - Chr4:29314345-29314364 MsG0480019901.01.T01:five_prime_UTR 20.0%
!! CACAAGTTAAAAAGTTTAAA+AGG - Chr4:29314584-29314603 MsG0480019901.01.T01:intron 20.0%
!! CATATATTGGATTAAGAATA+TGG - Chr4:29309811-29309830 MsG0480019901.01.T01:three_prime_UTR 20.0%
!! CTGAAACATAATATTATCAA+AGG + Chr4:29314170-29314189 None:intergenic 20.0%
!! TAACAAGATTGAAAATATGA+TGG - Chr4:29310922-29310941 MsG0480019901.01.T01:intron 20.0%
!! TATCCTTTCATTTCATATAT+TGG - Chr4:29309798-29309817 MsG0480019901.01.T01:three_prime_UTR 20.0%
!! TGGCAATATATAAATATGTA+TGG + Chr4:29314460-29314479 None:intergenic 20.0%
!! TTGAGTTAAAGTTAAAAAAG+AGG - Chr4:29314135-29314154 MsG0480019901.01.T01:CDS 20.0%
!!! ATCATATTTTCAATCTTGTT+AGG + Chr4:29310923-29310942 None:intergenic 20.0%
!!! ATTTTCATATATGAAGGAAA+TGG - Chr4:29313546-29313565 MsG0480019901.01.T01:CDS 20.0%
!!! ATTTTTTTTTTTTACCTGTG+GGG + Chr4:29313898-29313917 None:intergenic 20.0%
!!! CATTTTATACACAAATTGAA+AGG + Chr4:29314341-29314360 None:intergenic 20.0%
!!! GTATATTTCTCTTCAATTTT+AGG - Chr4:29312371-29312390 MsG0480019901.01.T01:intron 20.0%
!!! TTTTACGTATGAATTTTGTA+TGG + Chr4:29313797-29313816 None:intergenic 20.0%
! AAAATTCATCAACTTCTTCA+AGG - Chr4:29310516-29310535 MsG0480019901.01.T01:three_prime_UTR 25.0%
! AAAGGGACTTTGTATTTAAA+TGG - Chr4:29312839-29312858 MsG0480019901.01.T01:CDS 25.0%
! AGAGAGACATAATAATATGA+TGG + Chr4:29309927-29309946 None:intergenic 25.0%
! CAATCAAAGTTAGAAAAACT+TGG + Chr4:29312808-29312827 None:intergenic 25.0%
! CATGTTAAAAACAAAAGTTC+TGG - Chr4:29312761-29312780 MsG0480019901.01.T01:intron 25.0%
! GAAAATGCATCAAATATCAT+GGG - Chr4:29310314-29310333 MsG0480019901.01.T01:three_prime_UTR 25.0%
! TAAAAAAGCAGTTTCAGTAA+AGG - Chr4:29313812-29313831 MsG0480019901.01.T01:CDS 25.0%
! TAAATCACATATTAAGAGGT+AGG + Chr4:29312065-29312084 None:intergenic 25.0%
! TGAAAATGCATCAAATATCA+TGG - Chr4:29310313-29310332 MsG0480019901.01.T01:three_prime_UTR 25.0%
! TGCAATTTACAACATTGAAA+AGG + Chr4:29311855-29311874 None:intergenic 25.0%
! TTAAGATGTTAGAGACAAAA+TGG - Chr4:29313458-29313477 MsG0480019901.01.T01:CDS 25.0%
! TTTCATATAGAGTGTATCTT+TGG + Chr4:29313414-29313433 None:intergenic 25.0%
!! ATGATATTTGATGCATTTTC+AGG + Chr4:29310314-29310333 None:intergenic 25.0%
!! CTAAATAAACCTGAAGTATT+CGG + Chr4:29311381-29311400 None:intergenic 25.0%
!! TAGTTCTCTTTCTAGAAATT+TGG - Chr4:29313323-29313342 MsG0480019901.01.T01:intron 25.0%
!! TATATTTTGCCATTATTGGA+GGG - Chr4:29314375-29314394 MsG0480019901.01.T01:intron 25.0%
!! TGATATTTGATGCATTTTCA+GGG + Chr4:29310313-29310332 None:intergenic 25.0%
!! TGTCTATATTTTGCCATTAT+TGG - Chr4:29314371-29314390 MsG0480019901.01.T01:intron 25.0%
!!! ACAATTTTGATTTCAGTGAT+TGG - Chr4:29312455-29312474 MsG0480019901.01.T01:CDS 25.0%
!!! AGTATAGTATTGATGATTGA+TGG + Chr4:29313766-29313785 None:intergenic 25.0%
!!! CACACAAAGGTATTATTATT+AGG - Chr4:29313925-29313944 MsG0480019901.01.T01:CDS 25.0%
!!! CAGAACTTTTGTTTTTAACA+TGG + Chr4:29312763-29312782 None:intergenic 25.0%
!!! GAAACATACTCATTTTAACT+TGG - Chr4:29310101-29310120 MsG0480019901.01.T01:three_prime_UTR 25.0%
!!! TCTCTACATATTTTTGTTGT+TGG + Chr4:29313709-29313728 None:intergenic 25.0%
!!! TGTGAGCTTTTTGATTTTAA+AGG - Chr4:29314282-29314301 MsG0480019901.01.T01:five_prime_UTR 25.0%
!!! TTTCTAAAATCTTTTCTGTC+TGG + Chr4:29314201-29314220 None:intergenic 25.0%
!!! TTTTAACATGGACTAAAAAG+AGG + Chr4:29312751-29312770 None:intergenic 25.0%
AAAGAAGAAGAAAAAGGAGA+TGG + Chr4:29310034-29310053 None:intergenic 30.0%
AACAAACACAATGGCTTATT+TGG + Chr4:29309730-29309749 None:intergenic 30.0%
AAGAAGAAGAAAAAGGAGAT+GGG + Chr4:29310033-29310052 None:intergenic 30.0%
AATATATGGTATCACTCACA+TGG + Chr4:29314522-29314541 None:intergenic 30.0%
AATGGAAAGATGAAATGTGA+TGG + Chr4:29313101-29313120 None:intergenic 30.0%
ACAAAACATAACATCACATG+GGG - Chr4:29314414-29314433 MsG0480019901.01.T01:intron 30.0%
ACTGAATGAATAAGTGATTC+AGG + Chr4:29310395-29310414 None:intergenic 30.0%
AGTAGATGTATCTGAATCAA+TGG + Chr4:29312980-29312999 None:intergenic 30.0%
ATAATAACTGCCAATTACCA+AGG - Chr4:29313070-29313089 MsG0480019901.01.T01:intron 30.0%
ATATATGGTATCACTCACAT+GGG + Chr4:29314521-29314540 None:intergenic 30.0%
ATCTTCTCATCAACAAAGAT+TGG - Chr4:29310979-29310998 MsG0480019901.01.T01:intron 30.0%
ATTATTGGAGGGAAAAAAAG+AGG - Chr4:29314386-29314405 MsG0480019901.01.T01:intron 30.0%
ATTGTGTTTGTTTGTTTGAG+GGG - Chr4:29309738-29309757 MsG0480019901.01.T01:three_prime_UTR 30.0%
CAACTTTCTTTCTTGAATGA+TGG - Chr4:29310689-29310708 MsG0480019901.01.T01:three_prime_UTR 30.0%
CACAAAACATAACATCACAT+GGG - Chr4:29314413-29314432 MsG0480019901.01.T01:intron 30.0%
CATCATTCAAGAAAGAAAGT+TGG + Chr4:29310691-29310710 None:intergenic 30.0%
CATTGTGTTTGTTTGTTTGA+GGG - Chr4:29309737-29309756 MsG0480019901.01.T01:three_prime_UTR 30.0%
GAGACATAATAATATGATGG+TGG + Chr4:29309924-29309943 None:intergenic 30.0%
GGTAATTGGCAGTTATTATA+TGG + Chr4:29313069-29313088 None:intergenic 30.0%
GTAAAAATGGTACTAGTTGT+AGG - Chr4:29310858-29310877 MsG0480019901.01.T01:intron 30.0%
GTACAAAGGACTTGAAATTA+TGG + Chr4:29313972-29313991 None:intergenic 30.0%
GTGCAATAACTTACTTATCT+GGG + Chr4:29311659-29311678 None:intergenic 30.0%
GTTAATGAATAAACGCAGTT+TGG - Chr4:29312861-29312880 MsG0480019901.01.T01:CDS 30.0%
GTTTCAAAACCATGATGATT+TGG - Chr4:29310622-29310641 MsG0480019901.01.T01:three_prime_UTR 30.0%
TAACTTATGTCTCAAAGACA+CGG - Chr4:29314702-29314721 MsG0480019901.01.T01:five_prime_UTR 30.0%
TGTCTCTAACATCTTAACAA+AGG + Chr4:29313455-29313474 None:intergenic 30.0%
TTAAAAGTAGTATTCTCGTG+TGG + Chr4:29309992-29310011 None:intergenic 30.0%
TTATTGGAGGGAAAAAAAGA+GGG - Chr4:29314387-29314406 MsG0480019901.01.T01:intron 30.0%
TTCAAAGCTAGAAAAGAGTT+AGG - Chr4:29310419-29310438 MsG0480019901.01.T01:three_prime_UTR 30.0%
TTGAAAGGGAAAATAATTGC+AGG + Chr4:29314326-29314345 None:intergenic 30.0%
! AAAAGGAAATTCATGCCTTT+TGG + Chr4:29311058-29311077 None:intergenic 30.0%
! AAAAGTTCTGGCATTTATTC+AGG - Chr4:29312773-29312792 MsG0480019901.01.T01:intron 30.0%
! AATGATGCTTCTTATTTAGC+TGG - Chr4:29310773-29310792 MsG0480019901.01.T01:three_prime_UTR 30.0%
! ATGATTCATGTGGTTTGTAT+AGG - Chr4:29311905-29311924 MsG0480019901.01.T01:CDS 30.0%
! ATTAATTTTACCTGAACCTC+AGG + Chr4:29313264-29313283 None:intergenic 30.0%
! CTATATTTTGCCATTATTGG+AGG - Chr4:29314374-29314393 MsG0480019901.01.T01:intron 30.0%
! TCTTTTCTTGAACCAAATCA+TGG - Chr4:29310238-29310257 MsG0480019901.01.T01:three_prime_UTR 30.0%
! TTGATGAATTTTGCCTTGAA+AGG + Chr4:29310508-29310527 None:intergenic 30.0%
! TTTTGCCTTGAAAGGAAATT+AGG + Chr4:29310500-29310519 None:intergenic 30.0%
!! ACATCTACTAGCTCTAAATT+TGG - Chr4:29312991-29313010 MsG0480019901.01.T01:intron 30.0%
!! CTTTGAGACATAAGTTAAGA+AGG + Chr4:29314699-29314718 None:intergenic 30.0%
!! GTTTTCAAGGATCAAAAACA+TGG - Chr4:29310286-29310305 MsG0480019901.01.T01:three_prime_UTR 30.0%
!! TACATTTGTTTTTCCAGAGA+CGG - Chr4:29311548-29311567 MsG0480019901.01.T01:CDS 30.0%
!! TTGATTTGGAATTTGGACTT+AGG - Chr4:29313171-29313190 MsG0480019901.01.T01:CDS 30.0%
!!! CATACTCATTTTAACTTGGT+AGG - Chr4:29310105-29310124 MsG0480019901.01.T01:three_prime_UTR 30.0%
!!! CATGTCTTTATTTTGCAAGA+GGG - Chr4:29310831-29310850 MsG0480019901.01.T01:intron 30.0%
!!! CTTTTTAACTTGTGTCCTAA+AGG + Chr4:29314578-29314597 None:intergenic 30.0%
!!! TCATTTTAACTTGGTAGGTA+GGG - Chr4:29310110-29310129 MsG0480019901.01.T01:three_prime_UTR 30.0%
!!! TCTTTTTTTCCCTCCAATAA+TGG + Chr4:29314387-29314406 None:intergenic 30.0%
!!! TTTTGTTGTTGGATTTGTCA+AGG + Chr4:29313698-29313717 None:intergenic 30.0%
AAACATCCCAATAGTTCCAT+GGG + Chr4:29313207-29313226 None:intergenic 35.0%
AACATGTTAGGAGATTGAGT+AGG + Chr4:29312277-29312296 None:intergenic 35.0%
AACTTCAGCTTCTCTTGATA+TGG - Chr4:29313032-29313051 MsG0480019901.01.T01:intron 35.0%
AAGATGTTTCCGAATACTTC+AGG - Chr4:29311369-29311388 MsG0480019901.01.T01:intron 35.0%
AAGTAGATTTGTCTTGAAGC+TGG + Chr4:29311317-29311336 None:intergenic 35.0%
AATGAGGAGTTGCACAAATT+TGG - Chr4:29311233-29311252 MsG0480019901.01.T01:CDS 35.0%
ACAGGAAAATGAAGCAAAGA+TGG - Chr4:29313663-29313682 MsG0480019901.01.T01:CDS 35.0%
ACTAGTTGTAGGTTTCTTCA+TGG - Chr4:29310869-29310888 MsG0480019901.01.T01:intron 35.0%
ACTTCAGCTTCTCTTGATAT+GGG - Chr4:29313033-29313052 MsG0480019901.01.T01:intron 35.0%
AGATTCTGATCGAACATGTT+AGG + Chr4:29312289-29312308 None:intergenic 35.0%
AGTAGATTTGTCTTGAAGCT+GGG + Chr4:29311316-29311335 None:intergenic 35.0%
AGTATGATCTTCAACTTGGT+AGG - Chr4:29311998-29312017 MsG0480019901.01.T01:intron 35.0%
AGTGTCAAACACATATGAGA+AGG + Chr4:29311681-29311700 None:intergenic 35.0%
ATAACACTGAAGACATGTTG+TGG - Chr4:29312119-29312138 MsG0480019901.01.T01:CDS 35.0%
ATATCAAGAGAAGCTGAAGT+TGG + Chr4:29313033-29313052 None:intergenic 35.0%
ATATGAAGGAAATGGCTTGA+GGG - Chr4:29313554-29313573 MsG0480019901.01.T01:CDS 35.0%
ATTCAACGTAGGAGGTTAAT+GGG - Chr4:29312184-29312203 MsG0480019901.01.T01:CDS 35.0%
CAATCAATCAACGGTTATGT+TGG - Chr4:29312527-29312546 MsG0480019901.01.T01:CDS 35.0%
CAGGAAAACTAGATACCAAT+CGG + Chr4:29313245-29313264 None:intergenic 35.0%
CCACAAAACATAACATCACA+TGG - Chr4:29314412-29314431 MsG0480019901.01.T01:intron 35.0%
CCATTGTGTTTGTTTGTTTG+AGG - Chr4:29309736-29309755 MsG0480019901.01.T01:three_prime_UTR 35.0%
CCTCAAACAAACAAACACAA+TGG + Chr4:29309739-29309758 None:intergenic 35.0%
CCTCTTGCAAAATAAAGACA+TGG + Chr4:29310833-29310852 None:intergenic 35.0%
CTTCACCTAATTTCCTTTCA+AGG - Chr4:29310492-29310511 MsG0480019901.01.T01:three_prime_UTR 35.0%
CTTCATAACCATCCATGATT+TGG + Chr4:29310253-29310272 None:intergenic 35.0%
CTTGAAAGGAAATTAGGTGA+AGG + Chr4:29310494-29310513 None:intergenic 35.0%
GAAATTATGGTACCTGTGAA+AGG + Chr4:29313959-29313978 None:intergenic 35.0%
GAGGTAATTCTTCTCTTCAT+AGG - Chr4:29310735-29310754 MsG0480019901.01.T01:three_prime_UTR 35.0%
GGTGATGAAATTCATGTGAA+TGG + Chr4:29313119-29313138 None:intergenic 35.0%
GGTGCAATAACTTACTTATC+TGG + Chr4:29311660-29311679 None:intergenic 35.0%
TAGAAAGAGAACTAGACTGA+GGG + Chr4:29313317-29313336 None:intergenic 35.0%
TATATGAAGGAAATGGCTTG+AGG - Chr4:29313553-29313572 MsG0480019901.01.T01:CDS 35.0%
TATGCTCATCATGATTCATG+TGG - Chr4:29311895-29311914 MsG0480019901.01.T01:CDS 35.0%
TATTGGAGGGAAAAAAAGAG+GGG - Chr4:29314388-29314407 MsG0480019901.01.T01:intron 35.0%
TCTAATGGTCCATTAGAGAA+GGG + Chr4:29312955-29312974 None:intergenic 35.0%
TCTGAATCAATGGTCTCTAA+TGG + Chr4:29312970-29312989 None:intergenic 35.0%
TGCACAAATTTGGAAGATCA+AGG - Chr4:29311243-29311262 MsG0480019901.01.T01:CDS 35.0%
TGGAGTTGGAAATCATCAAT+TGG + Chr4:29310665-29310684 None:intergenic 35.0%
TGGTTATGAAGCAACTAAGA+TGG - Chr4:29310262-29310281 MsG0480019901.01.T01:three_prime_UTR 35.0%
TTCTCAGACTCGATTATCTT+CGG - Chr4:29311767-29311786 MsG0480019901.01.T01:intron 35.0%
TTCTGATCCTTCATATGGTT+GGG - Chr4:29310712-29310731 MsG0480019901.01.T01:three_prime_UTR 35.0%
TTCTTGAACCAAATCATGGA+TGG - Chr4:29310242-29310261 MsG0480019901.01.T01:three_prime_UTR 35.0%
TTGCTTCTTAGTAAAGAGCA+TGG - Chr4:29310338-29310357 MsG0480019901.01.T01:three_prime_UTR 35.0%
! AAAAGCATGCACATATGAAG+TGG - Chr4:29314017-29314036 MsG0480019901.01.T01:CDS 35.0%
! AGTACTTGTTAAGCCTTACA+AGG - Chr4:29311620-29311639 MsG0480019901.01.T01:intron 35.0%
! ATTTTACCCTTCTCCTTGTA+AGG + Chr4:29311636-29311655 None:intergenic 35.0%
! CAACTAAGATGGTGTTTTCA+AGG - Chr4:29310273-29310292 MsG0480019901.01.T01:three_prime_UTR 35.0%
! CCATGTGATGTTATGTTTTG+TGG + Chr4:29314415-29314434 None:intergenic 35.0%
! GATTTTGTTGCTGCTGTAAA+AGG + Chr4:29311075-29311094 None:intergenic 35.0%
! GTGAAGGACATTTTGTCTAA+AGG - Chr4:29311570-29311589 MsG0480019901.01.T01:intron 35.0%
! TACCAAGTTGAAGATCATAC+TGG + Chr4:29311999-29312018 None:intergenic 35.0%
! TCAAGAAAGAAAGTTGGTCT+TGG + Chr4:29310685-29310704 None:intergenic 35.0%
! TGCAGCTTTAATGATGAATG+AGG - Chr4:29311217-29311236 MsG0480019901.01.T01:CDS 35.0%
! TTTCTCTTGTTATGCTTTGC+AGG - Chr4:29310063-29310082 MsG0480019901.01.T01:three_prime_UTR 35.0%
! TTTTCTTTGTACAGTCCTAC+TGG - Chr4:29311281-29311300 MsG0480019901.01.T01:intron 35.0%
!! AAACCCTCATTTTGTTTGTG+AGG - Chr4:29311593-29311612 MsG0480019901.01.T01:intron 35.0%
!! AACCATGATGATTTGGTTGT+TGG - Chr4:29310629-29310648 MsG0480019901.01.T01:three_prime_UTR 35.0%
!! AGGAGCTTAATTTGCATGAA+TGG - Chr4:29312627-29312646 MsG0480019901.01.T01:CDS 35.0%
!! GTATTGATGATTGATGGTGA+TGG + Chr4:29313760-29313779 None:intergenic 35.0%
!! TCATGTTAACTTGTGCCTTT+AGG - Chr4:29314560-29314579 MsG0480019901.01.T01:intron 35.0%
!! TTCTTATTTAGCTGGTTCTG+AGG - Chr4:29310781-29310800 MsG0480019901.01.T01:intron 35.0%
!!! ATTGGTATCTAGTTTTCCTG+AGG - Chr4:29313245-29313264 MsG0480019901.01.T01:intron 35.0%
!!! CCATGTCTTTATTTTGCAAG+AGG - Chr4:29310830-29310849 MsG0480019901.01.T01:intron 35.0%
!!! CTCATTTTAACTTGGTAGGT+AGG - Chr4:29310109-29310128 MsG0480019901.01.T01:three_prime_UTR 35.0%
!!! TATGTGCATGCTTTTTCTCT+AGG + Chr4:29314012-29314031 None:intergenic 35.0%
AAGCTCACAATAGTAGCAAG+AGG + Chr4:29314271-29314290 None:intergenic 40.0%
AAGCTCTTGAGATTCAACGT+AGG - Chr4:29312173-29312192 MsG0480019901.01.T01:CDS 40.0%
AATCAACGGTTATGTTGGCA+AGG - Chr4:29312532-29312551 MsG0480019901.01.T01:CDS 40.0%
ACTTCTTCAAGGCTTAGTAC+TGG - Chr4:29310527-29310546 MsG0480019901.01.T01:three_prime_UTR 40.0%
AGAAAAAGGAGATGGGATGT+AGG + Chr4:29310026-29310045 None:intergenic 40.0%
AGCAGTTTCAGTAAAGGAAG+TGG - Chr4:29313818-29313837 MsG0480019901.01.T01:CDS 40.0%
AGCTGATAGTACTTTCAGAG+AGG - Chr4:29311346-29311365 MsG0480019901.01.T01:intron 40.0%
AGGAAATTAGGTGAAGGTGA+TGG + Chr4:29310488-29310507 None:intergenic 40.0%
AGTAATGCTTCAGTTTCTGC+TGG - Chr4:29312500-29312519 MsG0480019901.01.T01:CDS 40.0%
ATAATGCTCCAGCTGTACAA+AGG + Chr4:29313986-29314005 None:intergenic 40.0%
ATAGTAGTAGCTACCCAAGA+AGG + Chr4:29310587-29310606 None:intergenic 40.0%
ATGCTTCTGCTGCAATTGTT+GGG - Chr4:29310894-29310913 MsG0480019901.01.T01:intron 40.0%
CAAACATCCCAATAGTTCCA+TGG + Chr4:29313208-29313227 None:intergenic 40.0%
CACCAACAACCAAATCATCA+TGG + Chr4:29310634-29310653 None:intergenic 40.0%
CAGTTTCAGTAAAGGAAGTG+GGG - Chr4:29313820-29313839 MsG0480019901.01.T01:CDS 40.0%
CTAGAAAGAGAACTAGACTG+AGG + Chr4:29313318-29313337 None:intergenic 40.0%
CTCTAATGGTCCATTAGAGA+AGG + Chr4:29312956-29312975 None:intergenic 40.0%
GACCAGTATGATCTTCAACT+TGG - Chr4:29311994-29312013 MsG0480019901.01.T01:intron 40.0%
GAGCCTCACAAACAAAATGA+GGG + Chr4:29311599-29311618 None:intergenic 40.0%
GATTCAACGTAGGAGGTTAA+TGG - Chr4:29312183-29312202 MsG0480019901.01.T01:CDS 40.0%
GCAGTTTCAGTAAAGGAAGT+GGG - Chr4:29313819-29313838 MsG0480019901.01.T01:CDS 40.0%
GCGTATGCTTAGTATTTCAG+TGG - Chr4:29313356-29313375 MsG0480019901.01.T01:CDS 40.0%
GCTGGTCAACAATCAATCAA+CGG - Chr4:29312518-29312537 MsG0480019901.01.T01:CDS 40.0%
GGTGGAGAGTTATTAGAACA+AGG + Chr4:29310449-29310468 None:intergenic 40.0%
GTGTATCTTTGGTATCACAG+TGG + Chr4:29313403-29313422 None:intergenic 40.0%
GTTAAGCCTTACAAGGAGAA+GGG - Chr4:29311627-29311646 MsG0480019901.01.T01:intron 40.0%
GTTCTGATCCTTCATATGGT+TGG - Chr4:29310711-29310730 MsG0480019901.01.T01:three_prime_UTR 40.0%
TAGGAGATTGAGTAGGAGAA+TGG + Chr4:29312270-29312289 None:intergenic 40.0%
TAGTAGTAGCTACCCAAGAA+GGG + Chr4:29310586-29310605 None:intergenic 40.0%
TCTGATCCTTCATATGGTTG+GGG - Chr4:29310713-29310732 MsG0480019901.01.T01:three_prime_UTR 40.0%
TCTTTCCTTTGCTCACCAAA+AGG - Chr4:29311040-29311059 MsG0480019901.01.T01:intron 40.0%
TGGTAGGTAGGGTTTATTTG+TGG - Chr4:29310121-29310140 MsG0480019901.01.T01:three_prime_UTR 40.0%
TGTTAAGCCTTACAAGGAGA+AGG - Chr4:29311626-29311645 MsG0480019901.01.T01:intron 40.0%
TTAGTAGGTCCCTTCTCTAA+TGG - Chr4:29312943-29312962 MsG0480019901.01.T01:CDS 40.0%
TTCAACGTAGGAGGTTAATG+GGG - Chr4:29312185-29312204 MsG0480019901.01.T01:CDS 40.0%
! AAATTAGGTGAAGGTGATGG+AGG + Chr4:29310485-29310504 None:intergenic 40.0%
! CTGAATACTGACTGCATTGT+TGG - Chr4:29311407-29311426 MsG0480019901.01.T01:CDS 40.0%
! CTTTTGTAGGGGAAGCAAAA+GGG + Chr4:29312912-29312931 None:intergenic 40.0%
! GAATAAACGCAGTTTGGAGT+TGG - Chr4:29312867-29312886 MsG0480019901.01.T01:CDS 40.0%
! TTATGTTGGCAAGGAAGTGT+TGG - Chr4:29312541-29312560 MsG0480019901.01.T01:CDS 40.0%
! TTTCAAGTCCTTTGTACAGC+TGG - Chr4:29313975-29313994 MsG0480019901.01.T01:CDS 40.0%
!! AAGAAAGTTGGTCTTGGAGT+TGG + Chr4:29310679-29310698 None:intergenic 40.0%
!! ATGATTGATGGTGATGGTGT+TGG + Chr4:29313754-29313773 None:intergenic 40.0%
!! CATGATGATTTGGTTGTTGG+TGG - Chr4:29310632-29310651 MsG0480019901.01.T01:three_prime_UTR 40.0%
!! CTCTGAAAGTACTATCAGCT+GGG + Chr4:29311346-29311365 None:intergenic 40.0%
!! GATGGTTCTGATCCTTCATA+TGG - Chr4:29310707-29310726 MsG0480019901.01.T01:three_prime_UTR 40.0%
!! GCAAGAGGGTACTGTAAAAA+TGG - Chr4:29310845-29310864 MsG0480019901.01.T01:intron 40.0%
!! TCTCTGAAAGTACTATCAGC+TGG + Chr4:29311347-29311366 None:intergenic 40.0%
!!! ATCTAGTTTTCCTGAGGTTC+AGG - Chr4:29313251-29313270 MsG0480019901.01.T01:intron 40.0%
AAAATGTCCTTCACCGTCTC+TGG + Chr4:29311564-29311583 None:intergenic 45.0%
AAAGCTGCTGGAGACTTAGT+AGG - Chr4:29312928-29312947 MsG0480019901.01.T01:CDS 45.0%
AACATACGCTTCTGCTGGTA+TGG + Chr4:29311519-29311538 None:intergenic 45.0%
AACCATCCCAAACCCTTCTT+GGG - Chr4:29310571-29310590 MsG0480019901.01.T01:three_prime_UTR 45.0%
ACACTGAAGACATGTTGTGG+AGG - Chr4:29312122-29312141 MsG0480019901.01.T01:CDS 45.0%
ACCCATACACAAACACAACC+TGG + Chr4:29314480-29314499 None:intergenic 45.0%
ACTGCTCCTTCTGCAAAACA+AGG - Chr4:29309673-29309692 MsG0480019901.01.T01:three_prime_UTR 45.0%
AGTCCCAACTCAATACCATC+CGG + Chr4:29311736-29311755 None:intergenic 45.0%
ATCTTCGGTACCAGTTTGAG+TGG - Chr4:29311782-29311801 MsG0480019901.01.T01:intron 45.0%
ATGGTATCACTCACATGGGT+AGG + Chr4:29314517-29314536 None:intergenic 45.0%
CCAAATTAGCCCACTCAAAC+TGG + Chr4:29311795-29311814 None:intergenic 45.0%
CGAGCCTCACAAACAAAATG+AGG + Chr4:29311600-29311619 None:intergenic 45.0%
CTAGCATCAACAAGTCCAGT+TGG + Chr4:29311973-29311992 None:intergenic 45.0%
CTCTTGAGATTCAACGTAGG+AGG - Chr4:29312176-29312195 MsG0480019901.01.T01:CDS 45.0%
CTTATGTCTCAAAGACACGG+TGG - Chr4:29314705-29314724 MsG0480019901.01.T01:five_prime_UTR 45.0%
CTTCTGCCCATGGAACTATT+GGG - Chr4:29313198-29313217 MsG0480019901.01.T01:CDS 45.0%
GAAATGTGATGGCAGTACCT+TGG + Chr4:29313090-29313109 None:intergenic 45.0%
GATGCTTCTGCTGCAATTGT+TGG - Chr4:29310893-29310912 MsG0480019901.01.T01:intron 45.0%
GCCAGGTTGTGTTTGTGTAT+GGG - Chr4:29314476-29314495 MsG0480019901.01.T01:intron 45.0%
GCTGGGTTAATCATTCCAGT+AGG + Chr4:29311299-29311318 None:intergenic 45.0%
GGAACTATTGGGATGTTTGC+CGG - Chr4:29313209-29313228 MsG0480019901.01.T01:CDS 45.0%
GGAATCCTCACATCTTGAAC+AGG + Chr4:29311498-29311517 None:intergenic 45.0%
TAACCATCCCAAACCCTTCT+TGG - Chr4:29310570-29310589 MsG0480019901.01.T01:three_prime_UTR 45.0%
TAGCTACCCAAGAAGGGTTT+GGG + Chr4:29310580-29310599 None:intergenic 45.0%
TAGGAAGTAGCTCCTTTCAC+AGG - Chr4:29313944-29313963 MsG0480019901.01.T01:CDS 45.0%
TCCTCTTCATGACTTGAGCT+TGG + Chr4:29312611-29312630 None:intergenic 45.0%
TCTGAGCTTCTACGAAACGA+AGG + Chr4:29312319-29312338 None:intergenic 45.0%
TCTTCGGTACCAGTTTGAGT+GGG - Chr4:29311783-29311802 MsG0480019901.01.T01:intron 45.0%
TCTTCTGCCCATGGAACTAT+TGG - Chr4:29313197-29313216 MsG0480019901.01.T01:CDS 45.0%
TGACAGGTGTCCTGCAAAAT+GGG + Chr4:29314776-29314795 None:intergenic 45.0%
TGCCAGGTTGTGTTTGTGTA+TGG - Chr4:29314475-29314494 MsG0480019901.01.T01:intron 45.0%
TTACCTCCCCAACCATATGA+AGG + Chr4:29310722-29310741 None:intergenic 45.0%
TTCCATCCTAAACCAGCACT+TGG + Chr4:29310809-29310828 None:intergenic 45.0%
TTGGTCCTGTTCAAGATGTG+AGG - Chr4:29311490-29311509 MsG0480019901.01.T01:CDS 45.0%
! AAGTCTCCAGCAGCTTTTGT+AGG + Chr4:29312925-29312944 None:intergenic 45.0%
! AGTCTCCAGCAGCTTTTGTA+GGG + Chr4:29312924-29312943 None:intergenic 45.0%
! CTTAGGTTTTCTTCTGCCCA+TGG - Chr4:29313188-29313207 MsG0480019901.01.T01:CDS 45.0%
! GATGGCAGTACCTTGGTAAT+TGG + Chr4:29313083-29313102 None:intergenic 45.0%
! GCTTTTGTAGGGGAAGCAAA+AGG + Chr4:29312913-29312932 None:intergenic 45.0%
! GTGTTGGTCAATGGTGAGAA+TGG - Chr4:29312557-29312576 MsG0480019901.01.T01:CDS 45.0%
! TACCAGCAGAAGCGTATGTT+TGG - Chr4:29311519-29311538 MsG0480019901.01.T01:CDS 45.0%
! TCATGCCTTTTGGTGAGCAA+AGG + Chr4:29311048-29311067 None:intergenic 45.0%
! TGTTTTTCCAGAGACGGTGA+AGG - Chr4:29311554-29311573 MsG0480019901.01.T01:CDS 45.0%
! TTTGGGATGGTTAGAGAAGG+TGG + Chr4:29310563-29310582 None:intergenic 45.0%
!! AGGAGAATGGACTAGACTTC+CGG + Chr4:29312257-29312276 None:intergenic 45.0%
!! ATCCAAGTGCTGGTTTAGGA+TGG - Chr4:29310804-29310823 MsG0480019901.01.T01:intron 45.0%
!! CCAGTTTGAGTGGGCTAATT+TGG - Chr4:29311792-29311811 MsG0480019901.01.T01:intron 45.0%
AAATGGGAGCTTTCCCATGG+TGG + Chr4:29314760-29314779 None:intergenic 50.0%
AATGGGAGCTTTCCCATGGT+GGG + Chr4:29314759-29314778 None:intergenic 50.0%
AGAAGCTCAGAGTTCCCAGA+GGG - Chr4:29312328-29312347 MsG0480019901.01.T01:CDS 50.0%
AGACATGTTGTGGAGGAGGA+AGG - Chr4:29312129-29312148 MsG0480019901.01.T01:CDS 50.0%
AGCCAAACATACGCTTCTGC+TGG + Chr4:29311524-29311543 None:intergenic 50.0%
ATTCGTGTCCGTAACCCACT+TGG - Chr4:29311705-29311724 MsG0480019901.01.T01:intron 50.0%
CTAGATACCAATCGGTCCAC+CGG + Chr4:29313237-29313256 None:intergenic 50.0%
CTGAAGACATGTTGTGGAGG+AGG - Chr4:29312125-29312144 MsG0480019901.01.T01:CDS 50.0%
CTGACAGGTGTCCTGCAAAA+TGG + Chr4:29314777-29314796 None:intergenic 50.0%
GATCCTTCATATGGTTGGGG+AGG - Chr4:29310716-29310735 MsG0480019901.01.T01:three_prime_UTR 50.0%
GCAAAATGGGAGCTTTCCCA+TGG + Chr4:29314763-29314782 None:intergenic 50.0%
GCCAAGCTCAAGTCATGAAG+AGG - Chr4:29312607-29312626 MsG0480019901.01.T01:CDS 50.0%
GCTCCTTCTGCAAAACAAGG+CGG - Chr4:29309676-29309695 MsG0480019901.01.T01:three_prime_UTR 50.0%
GGAAAATACTCGCCATTCCC+AGG + Chr4:29314738-29314757 None:intergenic 50.0%
GGATGGTTAGAGAAGGTGGA+AGG + Chr4:29310559-29310578 None:intergenic 50.0%
GGGTTGCTGACATTGCAAGT+GGG - Chr4:29314434-29314453 MsG0480019901.01.T01:intron 50.0%
GTAGCTACCCAAGAAGGGTT+TGG + Chr4:29310581-29310600 None:intergenic 50.0%
TACCCAAGAAGGGTTTGGGA+TGG + Chr4:29310576-29310595 None:intergenic 50.0%
TAGAAGCTCAGAGTTCCCAG+AGG - Chr4:29312327-29312346 MsG0480019901.01.T01:CDS 50.0%
TGCAAAACAAGGCGGTGGTT+TGG - Chr4:29309684-29309703 MsG0480019901.01.T01:three_prime_UTR 50.0%
TTCAGTAAAGGAAGTGGGGC+AGG - Chr4:29313824-29313843 MsG0480019901.01.T01:CDS 50.0%
TTCGTGTCCGTAACCCACTT+GGG - Chr4:29311706-29311725 MsG0480019901.01.T01:intron 50.0%
! GATGGAGGAGTTGAAGGTGT+TGG + Chr4:29310470-29310489 None:intergenic 50.0%
! GGCGAGTATTTTCCCACCAT+GGG - Chr4:29314744-29314763 MsG0480019901.01.T01:five_prime_UTR 50.0%
! GGGTTTGGGATGGTTAGAGA+AGG + Chr4:29310566-29310585 None:intergenic 50.0%
! GTCTCCAGCAGCTTTTGTAG+GGG + Chr4:29312923-29312942 None:intergenic 50.0%
! TGCTGCTGCTTCTCAACTCA+TGG - Chr4:29311009-29311028 MsG0480019901.01.T01:intron 50.0%
! TGGCCGGATGGTATTGAGTT+GGG - Chr4:29311730-29311749 MsG0480019901.01.T01:intron 50.0%
! TGGCGAGTATTTTCCCACCA+TGG - Chr4:29314743-29314762 MsG0480019901.01.T01:five_prime_UTR 50.0%
! TGGGAAAGCTCCCATTTTGC+AGG - Chr4:29314763-29314782 MsG0480019901.01.T01:five_prime_UTR 50.0%
! TTGGCCGGATGGTATTGAGT+TGG - Chr4:29311729-29311748 MsG0480019901.01.T01:intron 50.0%
!! AGAATGGACTAGACTTCCGG+TGG + Chr4:29312254-29312273 None:intergenic 50.0%
!! GAAGGTGATGGAGGAGTTGA+AGG + Chr4:29310476-29310495 None:intergenic 50.0%
!! GAGGATCCAAGTGCTGGTTT+AGG - Chr4:29310800-29310819 MsG0480019901.01.T01:intron 50.0%
!! GATGGTGTTGGCATCTTTGG+TGG + Chr4:29313742-29313761 None:intergenic 50.0%
!! GGCAAGGAAGTGTTGGTCAA+TGG - Chr4:29312548-29312567 MsG0480019901.01.T01:CDS 50.0%
!! GGTGATGGTGTTGGCATCTT+TGG + Chr4:29313745-29313764 None:intergenic 50.0%
AGGAAGCAGCTTCAGCAGCA+GGG - Chr4:29311925-29311944 MsG0480019901.01.T01:CDS 55.0%
AGTCCAGTTGGAGTGCGACA+CGG + Chr4:29311961-29311980 None:intergenic 55.0%
ATTGGGATGTTTGCCGGCAC+CGG - Chr4:29313215-29313234 MsG0480019901.01.T01:CDS 55.0%
CACCAACGTGCACTTTCCAC+CGG - Chr4:29312235-29312254 MsG0480019901.01.T01:CDS 55.0%
CCTTCTGCAAAACAAGGCGG+TGG - Chr4:29309679-29309698 MsG0480019901.01.T01:three_prime_UTR 55.0%
CTCAGTAGTTACTGCCCCAC+AGG - Chr4:29313881-29313900 MsG0480019901.01.T01:CDS 55.0%
GCTTCCCCTACAAAAGCTGC+TGG - Chr4:29312916-29312935 MsG0480019901.01.T01:CDS 55.0%
GGGGAAGCAAAAGGGCTATC+AGG + Chr4:29312904-29312923 None:intergenic 55.0%
GGGGTTGCTGACATTGCAAG+TGG - Chr4:29314433-29314452 MsG0480019901.01.T01:intron 55.0%
TAGGAAGCAGCTTCAGCAGC+AGG - Chr4:29311924-29311943 MsG0480019901.01.T01:CDS 55.0%
TCACTCACATGGGTAGGTGC+TGG + Chr4:29314511-29314530 None:intergenic 55.0%
TGTCCGTAACCCACTTGGGT+TGG - Chr4:29311710-29311729 MsG0480019901.01.T01:intron 55.0%
! TTCCGGTGGAAAGTGCACGT+TGG + Chr4:29312240-29312259 None:intergenic 55.0%
!! ATGGGTAGGTGCTGGTTGGT+AGG + Chr4:29314503-29314522 None:intergenic 55.0%
!! GGAGGAGTTGAAGGTGTTGG+TGG + Chr4:29310467-29310486 None:intergenic 55.0%
!! GGTGTTGGCATCTTTGGTGG+TGG + Chr4:29313739-29313758 None:intergenic 55.0%
!! GGTTCTGAGGATCCAAGTGC+TGG - Chr4:29310794-29310813 MsG0480019901.01.T01:intron 55.0%
!! TCACATGGGTAGGTGCTGGT+TGG + Chr4:29314507-29314526 None:intergenic 55.0%
!!! CCACCGCCTTGTTTTGCAGA+AGG + Chr4:29309682-29309701 None:intergenic 55.0%
ACCATCCGGCCAACCCAAGT+GGG + Chr4:29311722-29311741 None:intergenic 60.0%
AGACACGGTGGCGTTTAGCC+TGG - Chr4:29314717-29314736 MsG0480019901.01.T01:five_prime_UTR 60.0%
GACACGGTGGCGTTTAGCCT+GGG - Chr4:29314718-29314737 MsG0480019901.01.T01:five_prime_UTR 60.0%
GGTGGCGTTTAGCCTGGGAA+TGG - Chr4:29314723-29314742 MsG0480019901.01.T01:five_prime_UTR 60.0%
TACCATCCGGCCAACCCAAG+TGG + Chr4:29311723-29311742 None:intergenic 60.0%
TCACCGTGTCGCACTCCAAC+TGG - Chr4:29311955-29311974 MsG0480019901.01.T01:CDS 60.0%
!! CGGCCAACCCAAGTGGGTTA+CGG + Chr4:29311716-29311735 None:intergenic 60.0%
!! CGTAACCCACTTGGGTTGGC+CGG - Chr4:29311714-29311733 MsG0480019901.01.T01:intron 60.0%
ACCAATCGGTCCACCGGTGC+CGG + Chr4:29313231-29313250 None:intergenic 65.0%
!! ACCCACTTGGGTTGGCCGGA+TGG - Chr4:29311718-29311737 MsG0480019901.01.T01:intron 65.0%
! GGGATGTTTGCCGGCACCGG+TGG - Chr4:29313218-29313237 MsG0480019901.01.T01:CDS 70.0%
!! GCCGGCACCGGTGGACCGAT+TGG - Chr4:29313227-29313246 MsG0480019901.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 29309654 29314809 29309654 ID=MsG0480019901.01;Name=MsG0480019901.01
Chr4 mRNA 29309654 29314809 29309654 ID=MsG0480019901.01.T01;Parent=MsG0480019901.01;Name=MsG0480019901.01.T01;_AED=0.22;_eAED=0.24;_QI=351|0.88|0.9|1|0.77|0.6|10|1159|719
Chr4 exon 29309654 29310796 29309654 ID=MsG0480019901.01.T01:exon:12247;Parent=MsG0480019901.01.T01
Chr4 exon 29311191 29311270 29311191 ID=MsG0480019901.01.T01:exon:12246;Parent=MsG0480019901.01.T01
Chr4 exon 29311372 29311584 29311372 ID=MsG0480019901.01.T01:exon:12245;Parent=MsG0480019901.01.T01
Chr4 exon 29311815 29311992 29311815 ID=MsG0480019901.01.T01:exon:12244;Parent=MsG0480019901.01.T01
Chr4 exon 29312114 29312359 29312114 ID=MsG0480019901.01.T01:exon:12243;Parent=MsG0480019901.01.T01
Chr4 exon 29312448 29312689 29312448 ID=MsG0480019901.01.T01:exon:12242;Parent=MsG0480019901.01.T01
Chr4 exon 29312799 29312978 29312799 ID=MsG0480019901.01.T01:exon:12241;Parent=MsG0480019901.01.T01
Chr4 exon 29313073 29313255 29313073 ID=MsG0480019901.01.T01:exon:12240;Parent=MsG0480019901.01.T01
Chr4 exon 29313353 29314378 29313353 ID=MsG0480019901.01.T01:exon:12239;Parent=MsG0480019901.01.T01
Chr4 exon 29314631 29314809 29314631 ID=MsG0480019901.01.T01:exon:12238;Parent=MsG0480019901.01.T01
Chr4 five_prime_UTR 29314631 29314809 29314631 ID=MsG0480019901.01.T01:five_prime_utr;Parent=MsG0480019901.01.T01
Chr4 five_prime_UTR 29314207 29314378 29314207 ID=MsG0480019901.01.T01:five_prime_utr;Parent=MsG0480019901.01.T01
Chr4 CDS 29313353 29314206 29313353 ID=MsG0480019901.01.T01:cds;Parent=MsG0480019901.01.T01
Chr4 CDS 29313073 29313255 29313073 ID=MsG0480019901.01.T01:cds;Parent=MsG0480019901.01.T01
Chr4 CDS 29312799 29312978 29312799 ID=MsG0480019901.01.T01:cds;Parent=MsG0480019901.01.T01
Chr4 CDS 29312448 29312689 29312448 ID=MsG0480019901.01.T01:cds;Parent=MsG0480019901.01.T01
Chr4 CDS 29312114 29312359 29312114 ID=MsG0480019901.01.T01:cds;Parent=MsG0480019901.01.T01
Chr4 CDS 29311815 29311992 29311815 ID=MsG0480019901.01.T01:cds;Parent=MsG0480019901.01.T01
Chr4 CDS 29311372 29311584 29311372 ID=MsG0480019901.01.T01:cds;Parent=MsG0480019901.01.T01
Chr4 CDS 29311207 29311270 29311207 ID=MsG0480019901.01.T01:cds;Parent=MsG0480019901.01.T01
Chr4 three_prime_UTR 29311191 29311206 29311191 ID=MsG0480019901.01.T01:three_prime_utr;Parent=MsG0480019901.01.T01
Chr4 three_prime_UTR 29309654 29310796 29309654 ID=MsG0480019901.01.T01:three_prime_utr;Parent=MsG0480019901.01.T01
Gene Sequence

>MsG0480019901.01.T01

ATGGATGGTTATGAAGCAACTAAGATGGTGTTTTCAAGGATCAAAAACATGGACCCTGAAAATGCATCAAATATCATGGGTTTGCTTCTTAGTAAAGAGCATGGTGAGAAAGAAATGATAAGATTAGCATTAAGTCCTGAATCACTTATTCATTCAGTGATTTTCAAAGCTAGAAAAGAGTTAGGACTACCTTGTTCTAATAACTCTCCACCAACACCTTCAACTCCTCCATCACCTTCACCTAATTTCCTTTCAAGGCAAAATTCATCAACTTCTTCAAGGCTTAGTACTGGTTTCAACCTTCCACCTTCTCTAACCATCCCAAACCCTTCTTGGGTAGCTACTACTATGTCTATGACTGATCAGTTTCAAAACCATGATGATTTGGTTGTTGGTGGTTCAGATCCAATTGATGATTTCCAACTCCAAGACCAACTTTCTTTCTTGAATGATGGTTCTGATCCTTCATATGGTTGGGGAGGTAATTCTTCTCTTCATAGGAGAAGTTGTTCTGTCAATGATGCTTCTTATTTAGCTGGTTCTGAGGATCCAAGTGCTGGTTTAGGATGGAAGCCATGTCTTTATTTTGCAAGAGGGTACTGTAAAAATGGTACTAGTTGTAGGTTTCTTCATGGTGATGCTTCTGCTGCAATTGTTGGGTCTCCTAACAAGATTGAAAATATGATGGATCAGTATCATCATCATGAACTCTTGAGATCTAAATCTTCTCATCAACAAAGATTGGCTGCTGCTGCTGCTGCTTCTCAACTCATGGCTTCTAACTCTTTCCTTTGCTCACCAAAAGGCATGAATTTCCTTTTACAGCAGCAACAAAATCAAAATGATACTCAAAGGGCAGCTGTTGCAGCTTTAATGATGAATGAGGAGTTGCACAAATTTGGAAGATCAAGGCTTGAAAGAAATGATTTTTCTTTGTACAGTCCTACTGGAATGATTAACCCAGCTTCAAGACAAATCTACTTGACTTTCCCAGCTGATAGTACTTTCAGAGAGGAAGATGTTTCCGAATACTTCAGCAAATTTGGTCCTGTTCAAGATGTGAGGATTCCATACCAGCAGAAGCGTATGTTTGGCTTTGTTACATTTGTTTTTCCAGAGACGGTGAAGGACATTTTGTCTAAAGGAAACCCTCATTTTGTTTGTGAGGCTCGAGTACTTGTTAAGCCTTACAAGGAGAAGGGTAAAATCCCAGATAAACTCGATTATCTTCGGTACCAGTTTGAGTGGGCTAATTTGGCTCGATTATCTTGTGTCATGCTTCGTAGCATATTTTTCCTTTTCAATGTTGTAAATTGCAGTCTTAAACGCGCTTTGAACTATGCTCATCATGATTCATGTGGTTTGTATAGGAAGCAGCTTCAGCAGCAGGGAGATTTTTCACCGTGTCGCACTCCAACTGGACTTGTTGATGCTAGAGACCAGTATGATCTTCAACTTGCTGAAAGAATGTTCTATAACACTGAAGACATGTTGTGGAGGAGGAAGGAGCAAGCTGAGTTGCAACAACAAGCTCTTGAGATTCAACGTAGGAGGTTAATGGGGCTGCAACTTCTTGACATCAAGAATCAACACCAACGTGCACTTTCCACCGGAAGTCTAGTCCATTCTCCTACTCAATCTCCTAACATGTTCGATCAGAATCTTGTTCTTCCTTCGTTTCGTAGAAGCTCAGAGTTCCCAGAGGTGATTGGTTCAAGTTCTTCTTCAGCTCATAGTAATGCTTCAGTTTCTGCTGGTCAACAATCAATCAACGGTTATGTTGGCAAGGAAGTGTTGGTCAATGGTGAGAATGGAAACAGTGAAAGTAATGAAAATAGCAAGCCAAGCTCAAGTCATGAAGAGGAGCTTAATTTGCATGAATGTTTGGAGTTGGAGCATAATCTACCTGATAGCCCTTTTGCTTCCCCTACAAAAGCTGCTGGAGACTTAGTAGGTCCCTTCTCTAATGGACCATTAGAGACCATTGATTCAGATACATCTACTAGCTCTAAATTTGGCACTAGTAAATTACTACCAACTTCAGCTTCTCTTGATATGGGATCTTTTAAACCATATAATAACTGCCAATTACCAAGGTTTTCTTCTGCCCATGGAACTATTGGGATGTTTGCCGGCACCGGTGGACCGATTGGTATCTAG
Protein sequence

>MsG0480019901.01.T01

MDGYEATKMVFSRIKNMDPENASNIMGLLLSKEHGEKEMIRLALSPESLIHSVIFKARKELGLPCSNNSPPTPSTPPSPSPNFLSRQNSSTSSRLSTGFNLPPSLTIPNPSWVATTMSMTDQFQNHDDLVVGGSDPIDDFQLQDQLSFLNDGSDPSYGWGGNSSLHRRSCSVNDASYLAGSEDPSAGLGWKPCLYFARGYCKNGTSCRFLHGDASAAIVGSPNKIENMMDQYHHHELLRSKSSHQQRLAAAAAASQLMASNSFLCSPKGMNFLLQQQQNQNDTQRAAVAALMMNEELHKFGRSRLERNDFSLYSPTGMINPASRQIYLTFPADSTFREEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVFPETVKDILSKGNPHFVCEARVLVKPYKEKGKIPDKLDYLRYQFEWANLARLSCVMLRSIFFLFNVVNCSLKRALNYAHHDSCGLYRKQLQQQGDFSPCRTPTGLVDARDQYDLQLAERMFYNTEDMLWRRKEQAELQQQALEIQRRRLMGLQLLDIKNQHQRALSTGSLVHSPTQSPNMFDQNLVLPSFRRSSEFPEVIGSSSSSAHSNASVSAGQQSINGYVGKEVLVNGENGNSESNENSKPSSSHEEELNLHECLELEHNLPDSPFASPTKAAGDLVGPFSNGPLETIDSDTSTSSKFGTSKLLPTSASLDMGSFKPYNNCQLPRFSSAHGTIGMFAGTGGPIGI*