AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680034842.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680034842.01.T01 MTR_6g478000 83.642 917 22 6 1 865 1 841 0.0 1532
MsG0680034842.01.T01 MTR_6g478030 94.471 633 14 2 96 713 894 1520 0.0 1236
MsG0680034842.01.T01 MTR_5g076830 67.788 832 210 4 6 786 4 828 0.0 1191
MsG0680034842.01.T01 MTR_3g064610 66.148 836 222 5 5 785 3 832 0.0 1160
MsG0680034842.01.T01 MTR_7g108930 54.478 804 311 4 11 766 9 805 0.0 880
MsG0680034842.01.T01 MTR_4g124660 56.929 736 292 5 45 764 76 802 0.0 874
MsG0680034842.01.T01 MTR_2g044070 52.104 808 328 6 7 764 2 800 0.0 868
MsG0680034842.01.T01 MTR_1g088170 56.927 729 292 3 45 758 79 800 0.0 862
MsG0680034842.01.T01 MTR_4g124660 57.980 683 262 5 45 711 76 749 0.0 816
MsG0680034842.01.T01 MTR_6g478020 93.651 252 11 2 593 839 1 252 4.43e-160 500
MsG0680034842.01.T01 MTR_0277s0020 80.074 271 17 3 600 865 1158 1396 7.35e-134 434
MsG0680034842.01.T01 MTR_0277s0030 87.421 159 15 2 712 865 65 223 4.19e-89 282
MsG0680034842.01.T01 MTR_0277s0030 83.824 68 11 0 537 604 1 68 3.96e-30 119
MsG0680034842.01.T01 MTR_0419s0050 59.119 159 5 2 537 695 1 99 2.43e-51 175
MsG0680034842.01.T01 MTR_0419s0010 94.828 58 3 0 701 758 12 69 1.41e-33 124
MsG0680034842.01.T01 MTR_6g081130 64.815 108 25 3 766 865 14 116 1.55e-32 122
MsG0680034842.01.T01 MTR_0419s0020 89.394 66 7 0 769 834 17 82 3.43e-31 117
MsG0680034842.01.T01 MTR_5g091340 26.204 519 311 20 255 712 171 678 3.57e-31 132
MsG0680034842.01.T01 MTR_4g115620 25.087 574 334 20 235 734 125 676 2.17e-30 129
MsG0680034842.01.T01 MTR_3g047380 24.663 519 316 15 255 712 167 671 1.35e-29 127
MsG0680034842.01.T01 MTR_0419s0060 80.769 52 6 1 769 816 17 68 2.38e-18 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680034842.01.T01 AT1G73370 67.273 825 211 4 1 774 1 817 0.0 1160
MsG0680034842.01.T01 AT1G73370 67.273 825 211 4 1 774 1 817 0.0 1160
MsG0680034842.01.T01 AT1G73370 70.738 745 195 3 45 774 37 773 0.0 1113
MsG0680034842.01.T01 AT5G37180 64.428 804 226 4 12 764 5 799 0.0 1086
MsG0680034842.01.T01 AT5G37180 72.177 611 155 1 169 764 1 611 0.0 944
MsG0680034842.01.T01 AT4G02280 57.823 735 288 3 44 763 77 804 0.0 890
MsG0680034842.01.T01 AT5G49190 57.007 735 294 3 45 764 65 792 0.0 876
MsG0680034842.01.T01 AT5G37180 73.599 553 131 1 227 764 1 553 0.0 875
MsG0680034842.01.T01 AT5G49190 57.007 735 294 3 45 764 9 736 0.0 875
MsG0680034842.01.T01 AT5G49190 57.007 735 294 3 45 764 75 802 0.0 875
MsG0680034842.01.T01 AT3G43190 56.929 736 292 5 45 764 78 804 0.0 868
MsG0680034842.01.T01 AT3G43190 56.929 736 292 5 45 764 78 804 0.0 868
MsG0680034842.01.T01 AT5G20830 56.504 738 296 5 45 766 78 806 0.0 863
MsG0680034842.01.T01 AT5G20830 56.504 738 296 5 45 766 78 806 0.0 863
MsG0680034842.01.T01 AT5G20830 56.504 738 296 5 45 766 78 806 0.0 863
MsG0680034842.01.T01 AT4G10120 25.241 519 314 15 255 724 23 516 1.34e-32 136
MsG0680034842.01.T01 AT4G10120 25.241 519 314 15 255 724 197 690 3.61e-32 135
MsG0680034842.01.T01 AT4G10120 25.241 519 314 15 255 724 197 690 3.61e-32 135
MsG0680034842.01.T01 AT4G10120 25.241 519 314 15 255 724 197 690 3.61e-32 135
MsG0680034842.01.T01 AT4G10120 24.699 498 303 13 274 724 17 489 5.34e-31 131
MsG0680034842.01.T01 AT1G04920 26.454 533 321 19 251 722 168 690 1.34e-30 130
MsG0680034842.01.T01 AT5G11110 25.235 531 326 20 255 738 177 683 1.31e-29 127
MsG0680034842.01.T01 AT5G20280 25.046 539 320 18 251 733 166 676 1.08e-28 124
MsG0680034842.01.T01 AT1G78800 26.891 238 142 9 493 722 176 389 7.84e-11 65.5

Find 180 sgRNAs with CRISPR-Local

Find 407 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTCTATTCATGGATATTT+TGG 0.085644 6:+95413590 MsG0680034842.01.T01:CDS
TCATTATCTCTTTAAGTATT+TGG 0.089740 6:+95418271 MsG0680034842.01.T01:CDS
TTCTGTTTCTTCTCTATCTT+TGG 0.134203 6:-95416240 None:intergenic
TTGAATATGGGATCAGTTTA+TGG 0.156087 6:+95416893 MsG0680034842.01.T01:CDS
AAAAGTGATTCCAATTTAAT+TGG 0.164315 6:-95413533 None:intergenic
CTTGCCATTGAGAAGATTAT+TGG 0.177357 6:-95416104 None:intergenic
AAACTTGGTTTCATCTTTAA+TGG 0.180177 6:+95414849 MsG0680034842.01.T01:CDS
CAAAGTGGTGATCTTTATTC+TGG 0.182888 6:+95418206 MsG0680034842.01.T01:CDS
TTAGGCCTAATCCTGGTTTC+TGG 0.186079 6:+95412113 MsG0680034842.01.T01:CDS
GACCTTGTAATTCAATCTTT+TGG 0.194986 6:-95414225 None:intergenic
TGGGATCAGTTTATGGGTTT+TGG 0.206703 6:+95416900 MsG0680034842.01.T01:CDS
TTACCTCTCCTTGGTGATTA+AGG 0.206756 6:-95412999 None:intergenic
TGTTAGCTTAGATTCAATTT+TGG 0.228497 6:-95417482 None:intergenic
TGCAAACAAAGTGTTGAATA+TGG 0.228861 6:+95416880 MsG0680034842.01.T01:CDS
TTGACATTGGTTGAGGTTCT+TGG 0.240050 6:-95417363 None:intergenic
TACCAAGATTCTTGAACTTA+TGG 0.245379 6:+95414786 MsG0680034842.01.T01:CDS
ACATTCTTAGAGTCCCTTTC+TGG 0.252632 6:+95414572 MsG0680034842.01.T01:CDS
AGCAGGAGATCCAATTAAAT+TGG 0.270611 6:+95413523 MsG0680034842.01.T01:CDS
GGAAAACCTGACCTCATTAT+TGG 0.272574 6:+95414811 MsG0680034842.01.T01:CDS
TTCAATACTTGATACCCTTA+TGG 0.274940 6:-95413028 None:intergenic
ATGGCACTTTCATCTTCTAT+TGG 0.281086 6:+95412886 MsG0680034842.01.T01:CDS
GAAACTATGTTCCAATGTTC+AGG 0.294329 6:-95416593 None:intergenic
ATGAAGATTCAGATGCTAAA+TGG 0.297761 6:+95415252 MsG0680034842.01.T01:CDS
TGATGATAGGTTCAAGTTCT+TGG 0.298390 6:-95414534 None:intergenic
CCAGCATTGTATGAAGCTTT+TGG 0.302612 6:+95416401 MsG0680034842.01.T01:CDS
TCAACCTTCCAGCAATTTCT+TGG 0.309492 6:-95415367 None:intergenic
GGATTACGTTGGTTGCTTCC+AGG 0.317665 6:+95418227 MsG0680034842.01.T01:CDS
TTTCATATTGATCCTCATAA+TGG 0.327462 6:+95416518 MsG0680034842.01.T01:CDS
TCATTTCAACAATGCACATT+TGG 0.335540 6:+95418434 MsG0680034842.01.T01:three_prime_UTR
TTCAATGCTTTCTGAAGCTT+TGG 0.336752 6:-95413167 None:intergenic
TAGCAAAGCATTTCTTCATA+TGG 0.338822 6:-95411344 None:intergenic
TGAGGTTCTTGGGGTACCTT+AGG 0.341726 6:-95417352 None:intergenic
TCTTTAATGGCTTCTAAACT+TGG 0.344781 6:+95414862 MsG0680034842.01.T01:CDS
CGGCTTTGTTTCAAGGCATC+AGG 0.345200 6:-95411318 None:intergenic
TTGGTAAATCTTGTAATTGT+TGG 0.346933 6:+95416194 MsG0680034842.01.T01:CDS
TAGAGAATGGGGATTTGATA+AGG 0.349353 6:+95413439 MsG0680034842.01.T01:CDS
TAAAGTGAATGCAGATGATT+TGG 0.361708 6:+95412144 MsG0680034842.01.T01:CDS
TGACATTGGTTGAGGTTCTT+GGG 0.367456 6:-95417362 None:intergenic
TGAATATGGGATCAGTTTAT+GGG 0.368768 6:+95416894 MsG0680034842.01.T01:CDS
ATTATAATTGATGGTGTCTC+AGG 0.371755 6:+95416494 MsG0680034842.01.T01:CDS
GTCCATAAGTTCAAGAATCT+TGG 0.373308 6:-95414788 None:intergenic
ATAACAATGTTGAACATGTT+TGG 0.375732 6:-95413566 None:intergenic
TGAAGAATTACTTTATAGTA+AGG 0.377629 6:+95415677 MsG0680034842.01.T01:CDS
TAATCTTCAATTTAGGAACT+TGG 0.378334 6:+95416979 MsG0680034842.01.T01:CDS
GGCAACCATTGCTCATGCTT+TGG 0.379572 6:+95415217 MsG0680034842.01.T01:intron
TGAAACAGGTTGGTTGCAAA+TGG 0.380181 6:+95411936 MsG0680034842.01.T01:intron
ATGGAAACGGCTTTGTTTCA+AGG 0.384267 6:-95411325 None:intergenic
TAGGCCTAATCCTGGTTTCT+GGG 0.387526 6:+95412114 MsG0680034842.01.T01:CDS
TGTGAGCAGGTTTAGAGAAT+GGG 0.396668 6:+95413427 MsG0680034842.01.T01:intron
TATTGAAATTGTTCCTCAAA+TGG 0.400675 6:+95411242 MsG0680034842.01.T01:exon
CTTTGCTTCTTCTCAGTGAA+AGG 0.403582 6:-95415630 None:intergenic
TGATTTCACCACACCTCATA+TGG 0.403948 6:+95412867 MsG0680034842.01.T01:CDS
TCTTGGGGTACCTTAGGAAT+TGG 0.407309 6:-95417346 None:intergenic
GCACATTTGGAATTAATTAG+TGG 0.410664 6:+95418447 MsG0680034842.01.T01:three_prime_UTR
AAAACCTGGCCTCCAGTGTC+TGG 0.410753 6:-95413635 None:intergenic
GAACAAGAGACTAAGAAGTT+TGG 0.412609 6:+95416175 MsG0680034842.01.T01:CDS
CATTGCTTTGCAGGCAAGAA+AGG 0.413703 6:+95417321 MsG0680034842.01.T01:intron
ATTGATTCATCTCCATTATG+AGG 0.417122 6:-95416530 None:intergenic
TGGCTTTAATTACCTCTCCT+TGG 0.417237 6:-95413008 None:intergenic
AGAGAATGGGGATTTGATAA+GGG 0.418726 6:+95413440 MsG0680034842.01.T01:CDS
TTGTGAGCAGGTTTAGAGAA+TGG 0.423330 6:+95413426 MsG0680034842.01.T01:intron
CTTTCATCTTCTATTGGAAA+AGG 0.424148 6:+95412892 MsG0680034842.01.T01:CDS
TGGGTGGTAATGATGACAAC+TGG 0.424364 6:-95417462 None:intergenic
ACAATAAAGTTGAAATAAGA+AGG 0.431928 6:-95418384 None:intergenic
GAGAGGTAATTAAAGCCATA+AGG 0.433197 6:+95413013 MsG0680034842.01.T01:CDS
AAATTATACTGATGGAAACT+TGG 0.433245 6:+95414834 MsG0680034842.01.T01:CDS
GCAGATGATTTGGAAGTAGA+TGG 0.435227 6:+95412154 MsG0680034842.01.T01:CDS
ATGAACATAAAAGCAATTCC+TGG 0.435819 6:-95418245 None:intergenic
ACTATAAAGTAATTCTTCAA+TGG 0.436376 6:-95415673 None:intergenic
CGTTTGATACCGAATGCAAA+AGG 0.436501 6:+95414499 MsG0680034842.01.T01:CDS
CCTTGGTTTGTTGCAAAAGT+TGG 0.440752 6:-95416458 None:intergenic
ATCGAAACGCGAAACCCATT+GGG 0.440968 6:-95414614 None:intergenic
AATGGGGATTTGATAAGGGC+TGG 0.447897 6:+95413444 MsG0680034842.01.T01:CDS
CGATGCATCGCGGATACAAA+AGG 0.447960 6:+95416365 MsG0680034842.01.T01:CDS
ATACTTGAAATACAAGGAAA+TGG 0.459100 6:+95412192 MsG0680034842.01.T01:CDS
AGTACTTACCAAGAAATTGC+TGG 0.461418 6:+95415359 MsG0680034842.01.T01:CDS
ATTGCCAGACACTGGAGGCC+AGG 0.463699 6:+95413631 MsG0680034842.01.T01:CDS
GCAAACAAAGTGTTGAATAT+GGG 0.464065 6:+95416881 MsG0680034842.01.T01:CDS
ATGGGGATTTGATAAGGGCT+GGG 0.465930 6:+95413445 MsG0680034842.01.T01:CDS
TTTGCTGTTAGGCCTAATCC+TGG 0.466122 6:+95412106 MsG0680034842.01.T01:CDS
GGAGCAGCAATGTTGAACTT+TGG 0.467131 6:-95415582 None:intergenic
CAGGGGTGAATCTTCAAGTA+AGG 0.467197 6:+95418169 MsG0680034842.01.T01:intron
TATTCCCAGAAACCAGGATT+AGG 0.467371 6:-95412118 None:intergenic
GGACTTTGTCGTGTAGTCTC+TGG 0.468167 6:+95415543 MsG0680034842.01.T01:CDS
TAAAGTAATTCTTCAATGGC+AGG 0.470601 6:-95415669 None:intergenic
TAATTTCCAATAATGAGGTC+AGG 0.474083 6:-95414817 None:intergenic
CTTGAAGTAGAAGCCATTTG+AGG 0.483755 6:-95411255 None:intergenic
AAGTTCAACATTGCTGCTCC+AGG 0.484663 6:+95415585 MsG0680034842.01.T01:CDS
AGCATTTCTTCATATGGAAA+CGG 0.485069 6:-95411338 None:intergenic
TTTGGCCAAGCAGATGTCCT+AGG 0.489984 6:+95413608 MsG0680034842.01.T01:CDS
GTAAATCTTGTAATTGTTGG+CGG 0.491458 6:+95416197 MsG0680034842.01.T01:CDS
TGGAACATAGTTTCTAAAGC+TGG 0.492132 6:+95416602 MsG0680034842.01.T01:CDS
TTTGCTTCTTCTCAGTGAAA+GGG 0.494336 6:-95415629 None:intergenic
CTCCAGTGTCTGGCAATCCT+AGG 0.494607 6:-95413625 None:intergenic
CCATCAATTATAATTTCAGC+TGG 0.497239 6:-95416485 None:intergenic
TTCCCTTCTCTGTCCAGAAA+GGG 0.498281 6:-95414585 None:intergenic
GGAGTTGTTGACATTGGTTG+AGG 0.498281 6:-95417370 None:intergenic
CACACTGCATTTACCATGCC+GGG 0.502984 6:+95415522 MsG0680034842.01.T01:CDS
ATTATTGGAAATTATACTGA+TGG 0.504515 6:+95414826 MsG0680034842.01.T01:CDS
GTTATATTTGTAGCTATACA+TGG 0.505406 6:+95416849 MsG0680034842.01.T01:intron
CTGGGGAAACACTGCAGGAA+GGG 0.509076 6:+95413463 MsG0680034842.01.T01:CDS
GAAGGGAATTCTATCCCAAT+GGG 0.510628 6:+95414600 MsG0680034842.01.T01:CDS
GGTTGGTTGCAAATGGGAAA+CGG 0.512383 6:+95411943 MsG0680034842.01.T01:intron
AACTGCAAAGTCAGTTCAGA+TGG 0.512383 6:+95416300 MsG0680034842.01.T01:CDS
GAAACCAATAATCTTCTCAA+TGG 0.514548 6:+95416100 MsG0680034842.01.T01:CDS
GAAACAGGTTGGTTGCAAAT+GGG 0.514671 6:+95411937 MsG0680034842.01.T01:intron
AGAGGTAATTAAAGCCATAA+GGG 0.516772 6:+95413014 MsG0680034842.01.T01:CDS
TAGACAGATTGATCAGCTCC+TGG 0.517673 6:-95415603 None:intergenic
GTGAGCAGGTTTAGAGAATG+GGG 0.518841 6:+95413428 MsG0680034842.01.T01:intron
GTTGAACAAAGAACAAAAGT+TGG 0.520029 6:+95416928 MsG0680034842.01.T01:CDS
CTCCAAAAGATTGAATTACA+AGG 0.520124 6:+95414223 MsG0680034842.01.T01:CDS
ATTCCCTTCTCTGTCCAGAA+AGG 0.522424 6:-95414586 None:intergenic
CCAGCTGAAATTATAATTGA+TGG 0.523668 6:+95416485 MsG0680034842.01.T01:CDS
TTTGTATCATCAGCAAGGAT+AGG 0.525118 6:+95415481 MsG0680034842.01.T01:intron
GTGTGAGTTTCATATTGTCC+TGG 0.526929 6:-95415504 None:intergenic
CTTTCTGAGGTACTAGAAGC+AGG 0.528208 6:+95413506 MsG0680034842.01.T01:CDS
TTCTAAACTTGGTGTAACTC+AGG 0.528300 6:+95414873 MsG0680034842.01.T01:CDS
TCTTCGCAAACCACTCGACT+AGG 0.528585 6:-95416154 None:intergenic
ATATGAAGAAATGCTTTGCT+AGG 0.529448 6:+95411346 MsG0680034842.01.T01:CDS
CTTAATAAGTAATTAAGCAA+TGG 0.529556 6:-95412976 None:intergenic
TTGTGCTGCATCATGCCCCT+TGG 0.530931 6:-95417416 None:intergenic
GATGAAATCACAATCATATG+TGG 0.533143 6:+95418327 MsG0680034842.01.T01:three_prime_UTR
GTCCTAGGATTGCCAGACAC+TGG 0.533564 6:+95413623 MsG0680034842.01.T01:CDS
GTCTTCAAAGAATCAATGAA+TGG 0.533715 6:+95416624 MsG0680034842.01.T01:CDS
ATCTTTATTCTGGATTACGT+TGG 0.533971 6:+95418216 MsG0680034842.01.T01:CDS
TTGTATTTCAAGTATTCTGA+AGG 0.535677 6:-95412184 None:intergenic
GAAGATGAAAGTGCCATATG+AGG 0.538755 6:-95412880 None:intergenic
AAGGACTTGACTTTACTACT+AGG 0.539536 6:+95412911 MsG0680034842.01.T01:CDS
AAGGGCTGGGGAAACACTGC+AGG 0.541174 6:+95413458 MsG0680034842.01.T01:CDS
CCAAAAGCTTCATACAATGC+TGG 0.542812 6:-95416401 None:intergenic
AATGATGACAACTGGGTTTG+AGG 0.543020 6:-95417454 None:intergenic
GTCCCTTTCTGGACAGAGAA+GGG 0.546251 6:+95414583 MsG0680034842.01.T01:CDS
GACATTGGTTGAGGTTCTTG+GGG 0.549444 6:-95417361 None:intergenic
AGTCCCTTTCTGGACAGAGA+AGG 0.554342 6:+95414582 MsG0680034842.01.T01:CDS
TCACACTGCATTTACCATGC+CGG 0.555687 6:+95415521 MsG0680034842.01.T01:CDS
TGATCAAGTAAGAGCACTAG+AGG 0.555960 6:+95414192 MsG0680034842.01.T01:CDS
AAAGCAGAAGCTACTTCCAA+GGG 0.561938 6:+95417400 MsG0680034842.01.T01:CDS
AAAAGCAGAAGCTACTTCCA+AGG 0.562076 6:+95417399 MsG0680034842.01.T01:CDS
TTCAATGGCAGGTTGAAAAG+TGG 0.562146 6:-95415658 None:intergenic
TTGGCAGGAGTTGTTGACAT+TGG 0.562547 6:-95417376 None:intergenic
AAGAAAGGTACCAATTCCTA+AGG 0.565800 6:+95417336 MsG0680034842.01.T01:CDS
TGGGGATTTGATAAGGGCTG+GGG 0.568733 6:+95413446 MsG0680034842.01.T01:CDS
AAATGGTATTTGATGAGAAG+TGG 0.572044 6:+95412209 MsG0680034842.01.T01:CDS
CAATAATCTTCTCAATGGCA+AGG 0.572371 6:+95416105 MsG0680034842.01.T01:CDS
CAGTATAATTTCCAATAATG+AGG 0.573217 6:-95414822 None:intergenic
ATCATCAGCAAGGATAGGCC+AGG 0.575526 6:+95415486 MsG0680034842.01.T01:intron
AGAAGGGAATTCTATCCCAA+TGG 0.579688 6:+95414599 MsG0680034842.01.T01:CDS
GAGACTACACGACAAAGTCC+CGG 0.583936 6:-95415540 None:intergenic
GTTTGATACCGAATGCAAAA+GGG 0.584344 6:+95414500 MsG0680034842.01.T01:CDS
GCTGGGGAAACACTGCAGGA+AGG 0.584577 6:+95413462 MsG0680034842.01.T01:CDS
TTAACATATTCCCAGAAACC+AGG 0.584706 6:-95412124 None:intergenic
CAAAGAACAAAAGTTGGCAA+AGG 0.588238 6:+95416934 MsG0680034842.01.T01:CDS
GCAAGACTAATCCTGAACAT+TGG 0.590830 6:+95416582 MsG0680034842.01.T01:CDS
TTGAATCTAAGCTAACATCA+AGG 0.597124 6:+95417488 MsG0680034842.01.T01:CDS
TAATTTCAGCTGGACCACCT+TGG 0.601700 6:-95416475 None:intergenic
TTCAGAATACTTGAAATACA+AGG 0.609609 6:+95412186 MsG0680034842.01.T01:CDS
AAGATTCTTGAACTTATGGA+CGG 0.613537 6:+95414790 MsG0680034842.01.T01:CDS
TGTGAAGCCTCAGATTCTTG+TGG 0.617074 6:+95414252 MsG0680034842.01.T01:CDS
TTTGGAACATTTATTCACAC+GGG 0.617507 6:+95418289 MsG0680034842.01.T01:CDS
TTTCTCCAAAGCATGAGCAA+TGG 0.620352 6:-95415222 None:intergenic
GCAATCCTAGGACATCTGCT+TGG 0.621565 6:-95413613 None:intergenic
ATTTGGAACATTTATTCACA+CGG 0.625203 6:+95418288 MsG0680034842.01.T01:CDS
TAGCATACCACAAGAATCTG+AGG 0.626563 6:-95414259 None:intergenic
ACTAGTTATGATAAAATCAG+CGG 0.631658 6:-95415339 None:intergenic
AAGTCAGTTCAGATGGATTG+CGG 0.636362 6:+95416307 MsG0680034842.01.T01:CDS
TACACGACAAAGTCCCGGCA+TGG 0.643912 6:-95415535 None:intergenic
ACATCAGCGGCCTAGTCGAG+TGG 0.646877 6:+95416144 MsG0680034842.01.T01:CDS
CTTACCAAGAAATTGCTGGA+AGG 0.648972 6:+95415363 MsG0680034842.01.T01:CDS
GACAATGAGAATGCTTTCTG+AGG 0.650408 6:+95413493 MsG0680034842.01.T01:CDS
GAACTAGCTGCTAAACAAAG+TGG 0.652790 6:+95418191 MsG0680034842.01.T01:CDS
GGGTGGTAATGATGACAACT+GGG 0.655065 6:-95417461 None:intergenic
TTATTAAGCCTTAATCACCA+AGG 0.670815 6:+95412991 MsG0680034842.01.T01:CDS
AAGCCTTAATCACCAAGGAG+AGG 0.670976 6:+95412996 MsG0680034842.01.T01:CDS
CTAGGATTGCCAGACACTGG+AGG 0.678488 6:+95413626 MsG0680034842.01.T01:CDS
TGGAGATGAATCAATCAACA+AGG 0.681896 6:+95416538 MsG0680034842.01.T01:CDS
GTGATTGAGGCAATGAACTG+TGG 0.684673 6:+95416431 MsG0680034842.01.T01:CDS
TGAAAGTGCCATATGAGGTG+TGG 0.718654 6:-95412875 None:intergenic
CAAACTGATAGATATCGCAA+CGG 0.721578 6:+95416332 MsG0680034842.01.T01:CDS
AAGCAGAAGCTACTTCCAAG+GGG 0.733208 6:+95417401 MsG0680034842.01.T01:CDS
AGAGCTTTACCGATGCATCG+CGG 0.787941 6:+95416355 MsG0680034842.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATTTATAAGAAGAAAAA+AGG - Chr6:95415393-95415412 None:intergenic 10.0%
!! ATATAAAAAAAACATATGTT+TGG + Chr6:95415865-95415884 MsG0680034842.01.T01:intron 10.0%
!! TAAAATATCATTATTATAGT+AGG + Chr6:95411480-95411499 MsG0680034842.01.T01:intron 10.0%
!! TTCAATTCTTATTATATTTA+AGG - Chr6:95417284-95417303 None:intergenic 10.0%
!! TTTATTATTTATTTACAGAT+TGG - Chr6:95411581-95411600 None:intergenic 10.0%
!!! TGAATAATATTTTCTTTATT+GGG + Chr6:95414147-95414166 MsG0680034842.01.T01:intron 10.0%
!!! TTATTTTTAATAGTTTTCAT+CGG + Chr6:95417013-95417032 MsG0680034842.01.T01:intron 10.0%
!!! TTTTACAATATATAACAAAT+AGG + Chr6:95417258-95417277 MsG0680034842.01.T01:intron 10.0%
!! AATAAGAATTGAAAAGTTAT+GGG + Chr6:95417291-95417310 MsG0680034842.01.T01:intron 15.0%
!! AATAATACTAATAGAGTAAT+CGG - Chr6:95415167-95415186 None:intergenic 15.0%
!! AATTCTTATATACTATCTTA+TGG + Chr6:95415418-95415437 MsG0680034842.01.T01:intron 15.0%
!! AGTAGTTAGATAAATTAATA+TGG - Chr6:95413687-95413706 None:intergenic 15.0%
!! ATAAAATAGTTAAAGGATTA+GGG + Chr6:95415784-95415803 MsG0680034842.01.T01:intron 15.0%
!! ATTACACTTATTAATTATCA+AGG + Chr6:95411433-95411452 MsG0680034842.01.T01:intron 15.0%
!! CAGTAATATAAAATAGTTAA+AGG + Chr6:95415777-95415796 MsG0680034842.01.T01:intron 15.0%
!! GATAAATTAATATGGTATTT+AGG - Chr6:95413679-95413698 None:intergenic 15.0%
!! TAACAAACAATATTATATGA+AGG + Chr6:95411821-95411840 MsG0680034842.01.T01:intron 15.0%
!! TAATAAGAATTGAAAAGTTA+TGG + Chr6:95417290-95417309 MsG0680034842.01.T01:intron 15.0%
!! TATAAAATAGTTAAAGGATT+AGG + Chr6:95415783-95415802 MsG0680034842.01.T01:intron 15.0%
!! TTAATGTAATATTATCATGA+TGG + Chr6:95415441-95415460 MsG0680034842.01.T01:intron 15.0%
!! TTTGAAAATGACAAATAAAT+CGG + Chr6:95416709-95416728 MsG0680034842.01.T01:intron 15.0%
!!! CTGAATAATATTTTCTTTAT+TGG + Chr6:95414146-95414165 MsG0680034842.01.T01:intron 15.0%
!!! TATGCATTTTTATTATAAAC+AGG + Chr6:95414756-95414775 MsG0680034842.01.T01:intron 15.0%
!!! TGTTTTATAATCTTCAATTT+AGG + Chr6:95416972-95416991 MsG0680034842.01.T01:CDS 15.0%
!! AAAAATGCATAATTAGAAAG+AGG - Chr6:95414747-95414766 None:intergenic 20.0%
!! AAAACCAAAATATTCATTTG+AGG - Chr6:95417578-95417597 None:intergenic 20.0%
!! AAAAGTGATTCCAATTTAAT+TGG - Chr6:95413536-95413555 None:intergenic 20.0%
!! AACAAATAATATGAGACAAA+AGG - Chr6:95411376-95411395 None:intergenic 20.0%
!! AATGCACAATCATAATATTT+AGG - Chr6:95417652-95417671 None:intergenic 20.0%
!! ACAATAAAGTTGAAATAAGA+AGG - Chr6:95418387-95418406 None:intergenic 20.0%
!! ACTAAAATTTGACAAAACTA+TGG + Chr6:95414074-95414093 MsG0680034842.01.T01:intron 20.0%
!! ACTATAAAGTAATTCTTCAA+TGG - Chr6:95415676-95415695 None:intergenic 20.0%
!! ATGCACAATCATAATATTTA+GGG - Chr6:95417651-95417670 None:intergenic 20.0%
!! ATTATTGGAAATTATACTGA+TGG + Chr6:95414826-95414845 MsG0680034842.01.T01:CDS 20.0%
!! ATTTATTTGACTCTTTGATA+AGG + Chr6:95412640-95412659 MsG0680034842.01.T01:intron 20.0%
!! CTTAATAAGTAATTAAGCAA+TGG - Chr6:95412979-95412998 None:intergenic 20.0%
!! TAAATGTATAGAATGAAAGT+TGG + Chr6:95411623-95411642 MsG0680034842.01.T01:intron 20.0%
!! TAACTTGATAAGTAAGTAAT+AGG - Chr6:95415733-95415752 None:intergenic 20.0%
!! TACTAATGTATTTGTATGTT+CGG + Chr6:95414437-95414456 MsG0680034842.01.T01:intron 20.0%
!! TAGTTTAACAAACATTCATA+TGG + Chr6:95416800-95416819 MsG0680034842.01.T01:intron 20.0%
!! TCATTATCTCTTTAAGTATT+TGG + Chr6:95418271-95418290 MsG0680034842.01.T01:CDS 20.0%
!! TGAAGAATTACTTTATAGTA+AGG + Chr6:95415677-95415696 MsG0680034842.01.T01:CDS 20.0%
!! TTAATAGTATATTGACACTT+CGG - Chr6:95413371-95413390 None:intergenic 20.0%
!! TTATACTTATTAATGCCTTA+GGG + Chr6:95418019-95418038 MsG0680034842.01.T01:intron 20.0%
!! TTCTTCAATGTTAAATTCTT+TGG - Chr6:95418051-95418070 None:intergenic 20.0%
!! TTTATGGTTATGGATATTAT+CGG + Chr6:95416658-95416677 MsG0680034842.01.T01:intron 20.0%
!! TTTGTAACACTATATAACAT+TGG + Chr6:95414111-95414130 MsG0680034842.01.T01:intron 20.0%
!!! AAATCTCTAAAAACTTATCT+CGG + Chr6:95417211-95417230 MsG0680034842.01.T01:intron 20.0%
!!! AAATTTTAGTTGTATTGAAG+GGG - Chr6:95414064-95414083 None:intergenic 20.0%
!!! ATTATTTGTTGTTTAAGGTT+AGG + Chr6:95411386-95411405 MsG0680034842.01.T01:intron 20.0%
!!! ATTGTTATTTTCTCTATTCA+TGG + Chr6:95413581-95413600 MsG0680034842.01.T01:CDS 20.0%
!!! CAAATTTTAGTTGTATTGAA+GGG - Chr6:95414065-95414084 None:intergenic 20.0%
!!! CTAGAAATGCAATTTTTATT+TGG + Chr6:95412277-95412296 MsG0680034842.01.T01:intron 20.0%
!!! CTCATATTATTTGTTGTTTA+AGG + Chr6:95411381-95411400 MsG0680034842.01.T01:intron 20.0%
!!! GTATTGATCACATTTTTAAT+AGG - Chr6:95411749-95411768 None:intergenic 20.0%
!!! GTTGTTTTTTGTGTTAATTT+TGG + Chr6:95411872-95411891 MsG0680034842.01.T01:intron 20.0%
!!! TAATCTGTTTTGTAAATTGA+GGG - Chr6:95412353-95412372 None:intergenic 20.0%
!!! TCAAATTTTAGTTGTATTGA+AGG - Chr6:95414066-95414085 None:intergenic 20.0%
!!! TTTACCTCAAATGAATATTT+TGG + Chr6:95417571-95417590 MsG0680034842.01.T01:intron 20.0%
! AAAATTCCAATAATGACGTA+CGG + Chr6:95413771-95413790 MsG0680034842.01.T01:intron 25.0%
! AAAATTGAAGATTCATACGA+TGG - Chr6:95414377-95414396 None:intergenic 25.0%
! AAACTTGGTTTCATCTTTAA+TGG + Chr6:95414849-95414868 MsG0680034842.01.T01:CDS 25.0%
! AAATTATACTGATGGAAACT+TGG + Chr6:95414834-95414853 MsG0680034842.01.T01:CDS 25.0%
! AAGCATTTATGAGACTATTT+CGG - Chr6:95415079-95415098 None:intergenic 25.0%
! AATATCAAATATGGAAGAGA+GGG - Chr6:95414699-95414718 None:intergenic 25.0%
! AATGGTACATTTCTGATTTA+TGG + Chr6:95416642-95416661 MsG0680034842.01.T01:intron 25.0%
! ACATTTCTGATTTATGGTTA+TGG + Chr6:95416648-95416667 MsG0680034842.01.T01:intron 25.0%
! ACGTTAAAAATTGGAATGTT+TGG - Chr6:95417749-95417768 None:intergenic 25.0%
! ACTAGTTATGATAAAATCAG+CGG - Chr6:95415342-95415361 None:intergenic 25.0%
! AGGTATGAAAAATATGAAAC+AGG + Chr6:95411922-95411941 MsG0680034842.01.T01:intron 25.0%
! ATAACAATGTTGAACATGTT+TGG - Chr6:95413569-95413588 None:intergenic 25.0%
! ATACTTGAAATACAAGGAAA+TGG + Chr6:95412192-95412211 MsG0680034842.01.T01:CDS 25.0%
! ATGAAAAATATGAAACAGGT+TGG + Chr6:95411926-95411945 MsG0680034842.01.T01:intron 25.0%
! CAAAAACAACTATACAAATG+AGG - Chr6:95412256-95412275 None:intergenic 25.0%
! CAGTATAATTTCCAATAATG+AGG - Chr6:95414825-95414844 None:intergenic 25.0%
! CATGTGTGAAACTAAAAAAA+AGG + Chr6:95417540-95417559 MsG0680034842.01.T01:intron 25.0%
! CTTCTATCTATAATGATTGA+AGG + Chr6:95415196-95415215 MsG0680034842.01.T01:intron 25.0%
! CTTTAGTCCTTCAAATTATA+AGG - Chr6:95412590-95412609 None:intergenic 25.0%
! GTTATACTTATTAATGCCTT+AGG + Chr6:95418018-95418037 MsG0680034842.01.T01:intron 25.0%
! GTTATATTTGTAGCTATACA+TGG + Chr6:95416849-95416868 MsG0680034842.01.T01:intron 25.0%
! TAACATGATTTGAATTTGCA+GGG + Chr6:95412804-95412823 MsG0680034842.01.T01:intron 25.0%
! TAATATCAAATATGGAAGAG+AGG - Chr6:95414700-95414719 None:intergenic 25.0%
! TAATCTTCAATTTAGGAACT+TGG + Chr6:95416979-95416998 MsG0680034842.01.T01:CDS 25.0%
! TATAATTTGAAGGACTAAAG+TGG + Chr6:95412590-95412609 MsG0680034842.01.T01:intron 25.0%
! TATTGAAATTGTTCCTCAAA+TGG + Chr6:95411242-95411261 MsG0680034842.01.T01:exon 25.0%
! TCATACCTTAATGTTAAAGA+AGG - Chr6:95411910-95411929 None:intergenic 25.0%
! TCATTATTATAGTAGGAGTA+AGG + Chr6:95411487-95411506 MsG0680034842.01.T01:intron 25.0%
! TCCTTGAAATTGTAAACATA+AGG + Chr6:95412318-95412337 MsG0680034842.01.T01:intron 25.0%
! TGAGCAAATCTTTCTAAATA+AGG - Chr6:95414646-95414665 None:intergenic 25.0%
! TTAACAAACATTCATATGGT+TGG + Chr6:95416804-95416823 MsG0680034842.01.T01:intron 25.0%
! TTAACATGATTTGAATTTGC+AGG + Chr6:95412803-95412822 MsG0680034842.01.T01:intron 25.0%
! TTCAGAATACTTGAAATACA+AGG + Chr6:95412186-95412205 MsG0680034842.01.T01:CDS 25.0%
! TTGGTAAATCTTGTAATTGT+TGG + Chr6:95416194-95416213 MsG0680034842.01.T01:CDS 25.0%
! TTTAGAGATTTCAAGAATAC+CGG - Chr6:95417202-95417221 None:intergenic 25.0%
! TTTCATATTGATCCTCATAA+TGG + Chr6:95416518-95416537 MsG0680034842.01.T01:CDS 25.0%
!! ATTTGGAACATTTATTCACA+CGG + Chr6:95418288-95418307 MsG0680034842.01.T01:CDS 25.0%
!! CTAATCTGTTTTGTAAATTG+AGG - Chr6:95412354-95412373 None:intergenic 25.0%
!! CTCTAAAGAAATTTGAACTT+CGG - Chr6:95412716-95412735 None:intergenic 25.0%
!! CTTGGTAGTAATATCAAATA+TGG - Chr6:95414708-95414727 None:intergenic 25.0%
!! TTATTTAGAAAGATTTGCTC+AGG + Chr6:95414645-95414664 MsG0680034842.01.T01:intron 25.0%
!! TTCTCTATTCATGGATATTT+TGG + Chr6:95413590-95413609 MsG0680034842.01.T01:CDS 25.0%
!! TTGTATTTCAAGTATTCTGA+AGG - Chr6:95412187-95412206 None:intergenic 25.0%
!!! ATCTAACTACTTTTCTCAAT+AGG + Chr6:95413696-95413715 MsG0680034842.01.T01:intron 25.0%
!!! ATTGTGCATTTTTTAACTCA+AGG + Chr6:95417662-95417681 MsG0680034842.01.T01:intron 25.0%
!!! ATTTTAGTTACATTGTAGTC+TGG - Chr6:95411698-95411717 None:intergenic 25.0%
!!! CAATGTTTTGAAAATTGAAC+CGG + Chr6:95411526-95411545 MsG0680034842.01.T01:intron 25.0%
!!! CTCATTTGTATAGTTGTTTT+TGG + Chr6:95412254-95412273 MsG0680034842.01.T01:intron 25.0%
!!! GTTAGCTTAGATTCAATTTT+GGG - Chr6:95417484-95417503 None:intergenic 25.0%
!!! TCTAACTACTTTTCTCAATA+GGG + Chr6:95413697-95413716 MsG0680034842.01.T01:intron 25.0%
!!! TGTTAGCTTAGATTCAATTT+TGG - Chr6:95417485-95417504 None:intergenic 25.0%
!!! TTTTTTTAGTTTCACACATG+AGG - Chr6:95417540-95417559 None:intergenic 25.0%
AAACTCAAATACGTCAATCA+AGG + Chr6:95415111-95415130 MsG0680034842.01.T01:intron 30.0%
AAATGGTATTTGATGAGAAG+TGG + Chr6:95412209-95412228 MsG0680034842.01.T01:CDS 30.0%
AAGATTCTTGAACTTATGGA+CGG + Chr6:95414790-95414809 MsG0680034842.01.T01:CDS 30.0%
AAGGTCTAATTATGCAAAGT+GGG + Chr6:95417681-95417700 MsG0680034842.01.T01:intron 30.0%
AATAAGGAAGGATTAAAACC+TGG - Chr6:95413652-95413671 None:intergenic 30.0%
AATGAACACAAAATTGCTTC+CGG + Chr6:95417180-95417199 MsG0680034842.01.T01:intron 30.0%
AGAGGTAATTAAAGCCATAA+GGG + Chr6:95413014-95413033 MsG0680034842.01.T01:CDS 30.0%
AGCATTTCTTCATATGGAAA+CGG - Chr6:95411341-95411360 None:intergenic 30.0%
AGTGAGACTAAATCACATAA+TGG + Chr6:95411968-95411987 MsG0680034842.01.T01:intron 30.0%
ATATGAAGAAATGCTTTGCT+AGG + Chr6:95411346-95411365 MsG0680034842.01.T01:CDS 30.0%
ATCTTTATTCTGGATTACGT+TGG + Chr6:95418216-95418235 MsG0680034842.01.T01:CDS 30.0%
ATGAACATAAAAGCAATTCC+TGG - Chr6:95418248-95418267 None:intergenic 30.0%
ATGAAGATTCAGATGCTAAA+TGG + Chr6:95415252-95415271 MsG0680034842.01.T01:CDS 30.0%
ATGGTATTTAGGAACCAATA+AGG - Chr6:95413668-95413687 None:intergenic 30.0%
CACTTCCTTCTTTAACATTA+AGG + Chr6:95411902-95411921 MsG0680034842.01.T01:intron 30.0%
CCAGCTGAAATTATAATTGA+TGG + Chr6:95416485-95416504 MsG0680034842.01.T01:CDS 30.0%
CCATCAATTATAATTTCAGC+TGG - Chr6:95416488-95416507 None:intergenic 30.0%
CCATTGAAGATAAAAATGAG+AGG + Chr6:95412006-95412025 MsG0680034842.01.T01:intron 30.0%
CTAAAATCACACAAATTGAC+CGG + Chr6:95411711-95411730 MsG0680034842.01.T01:intron 30.0%
CTAACAGCAAAAACAACATA+TGG - Chr6:95412097-95412116 None:intergenic 30.0%
CTCCAAAAGATTGAATTACA+AGG + Chr6:95414223-95414242 MsG0680034842.01.T01:CDS 30.0%
CTTTCATCTTCTATTGGAAA+AGG + Chr6:95412892-95412911 MsG0680034842.01.T01:CDS 30.0%
GAAACCAATAATCTTCTCAA+TGG + Chr6:95416100-95416119 MsG0680034842.01.T01:CDS 30.0%
GACTGATCCTTATAATTTGA+AGG + Chr6:95412580-95412599 MsG0680034842.01.T01:intron 30.0%
GATGAAATCACAATCATATG+TGG + Chr6:95418327-95418346 MsG0680034842.01.T01:three_prime_UTR 30.0%
GCCTTATGTTTACAATTTCA+AGG - Chr6:95412322-95412341 None:intergenic 30.0%
GGAACTAAAATGCATAATCT+TGG - Chr6:95414726-95414745 None:intergenic 30.0%
GTAAATCTTGTAATTGTTGG+CGG + Chr6:95416197-95416216 MsG0680034842.01.T01:CDS 30.0%
GTCAATCAAGGAATATTCAT+CGG + Chr6:95415123-95415142 MsG0680034842.01.T01:intron 30.0%
GTCTTCAAAGAATCAATGAA+TGG + Chr6:95416624-95416643 MsG0680034842.01.T01:CDS 30.0%
GTTGAACAAAGAACAAAAGT+TGG + Chr6:95416928-95416947 MsG0680034842.01.T01:CDS 30.0%
GTTTCCTTTCTATGTTTCAT+CGG + Chr6:95414402-95414421 MsG0680034842.01.T01:intron 30.0%
TAAAGTAATTCTTCAATGGC+AGG - Chr6:95415672-95415691 None:intergenic 30.0%
TAAAGTGAATGCAGATGATT+TGG + Chr6:95412144-95412163 MsG0680034842.01.T01:CDS 30.0%
TAATTTCCAATAATGAGGTC+AGG - Chr6:95414820-95414839 None:intergenic 30.0%
TACCAAGATTCTTGAACTTA+TGG + Chr6:95414786-95414805 MsG0680034842.01.T01:CDS 30.0%
TACGAAAGTGACAGTTAAAA+AGG + Chr6:95416753-95416772 MsG0680034842.01.T01:intron 30.0%
TAGGGTTTAAATTCTAGTGT+AGG + Chr6:95415802-95415821 MsG0680034842.01.T01:intron 30.0%
TATATGTCTTTGGATTTGCA+GGG + Chr6:95418151-95418170 MsG0680034842.01.T01:intron 30.0%
TATTTAGGAACCAATAAGGA+AGG - Chr6:95413664-95413683 None:intergenic 30.0%
TCATTTCAACAATGCACATT+TGG + Chr6:95418434-95418453 MsG0680034842.01.T01:three_prime_UTR 30.0%
TCGTCGAATTAAAATGTGTT+TGG + Chr6:95416051-95416070 MsG0680034842.01.T01:intron 30.0%
TCTTTAATGGCTTCTAAACT+TGG + Chr6:95414862-95414881 MsG0680034842.01.T01:CDS 30.0%
TGAATATGGGATCAGTTTAT+GGG + Chr6:95416894-95416913 MsG0680034842.01.T01:CDS 30.0%
TTATTAAGCCTTAATCACCA+AGG + Chr6:95412991-95413010 MsG0680034842.01.T01:CDS 30.0%
TTCAATACTTGATACCCTTA+TGG - Chr6:95413031-95413050 None:intergenic 30.0%
TTGAATATGGGATCAGTTTA+TGG + Chr6:95416893-95416912 MsG0680034842.01.T01:CDS 30.0%
TTGAATCTAAGCTAACATCA+AGG + Chr6:95417488-95417507 MsG0680034842.01.T01:CDS 30.0%
TTGATATGCAAGTCTTTCAT+TGG - Chr6:95412423-95412442 None:intergenic 30.0%
TTTGGATGATAAGCATGTTA+TGG + Chr6:95415883-95415902 MsG0680034842.01.T01:intron 30.0%
! AAAATGAGAGGAAAAGCTTT+TGG + Chr6:95412018-95412037 MsG0680034842.01.T01:intron 30.0%
! AAAATTGGAATGTTTGGTGA+AGG - Chr6:95417743-95417762 None:intergenic 30.0%
! AAATCACATAATGGAAGATG+TGG + Chr6:95411977-95411996 MsG0680034842.01.T01:intron 30.0%
! ATTGATTCATCTCCATTATG+AGG - Chr6:95416533-95416552 None:intergenic 30.0%
! CTGTTTTCAAAATTCTGGTA+TGG - Chr6:95413233-95413252 None:intergenic 30.0%
! CTTTTGCATGTATATGTCTT+TGG + Chr6:95418141-95418160 MsG0680034842.01.T01:intron 30.0%
! GACCTTGTAATTCAATCTTT+TGG - Chr6:95414228-95414247 None:intergenic 30.0%
! GCACATTTGGAATTAATTAG+TGG + Chr6:95418447-95418466 MsG0680034842.01.T01:three_prime_UTR 30.0%
! GTACGTCATTATTGGAATTT+TGG - Chr6:95413772-95413791 None:intergenic 30.0%
! GTCATTATTGGAATTTTGGA+CGG - Chr6:95413768-95413787 None:intergenic 30.0%
! TAGCAAAGCATTTCTTCATA+TGG - Chr6:95411347-95411366 None:intergenic 30.0%
! TCTCTATCTTTGGATTTTGA+CGG - Chr6:95416233-95416252 None:intergenic 30.0%
! TTAAAATGTGTTTGGAACAG+TGG + Chr6:95416059-95416078 MsG0680034842.01.T01:intron 30.0%
! TTCTCAATAGGGACATTTTA+TGG + Chr6:95413708-95413727 MsG0680034842.01.T01:intron 30.0%
! TTCTGTTTCTTCTCTATCTT+TGG - Chr6:95416243-95416262 None:intergenic 30.0%
! TTGAACGTTACCAAATGTTT+TGG + Chr6:95413314-95413333 MsG0680034842.01.T01:intron 30.0%
! TTTCAAGTACTAGTTCACAA+TGG + Chr6:95414032-95414051 MsG0680034842.01.T01:intron 30.0%
! TTTGGAACATTTATTCACAC+GGG + Chr6:95418289-95418308 MsG0680034842.01.T01:CDS 30.0%
! TTTTCTTTATTGGGACTAAC+AGG + Chr6:95414156-95414175 MsG0680034842.01.T01:intron 30.0%
!! AGCTATTTTCAAAGCTATTC+TGG + Chr6:95414991-95415010 MsG0680034842.01.T01:intron 30.0%
!! AGGTTTTAATCCTTCCTTAT+TGG + Chr6:95413651-95413670 MsG0680034842.01.T01:intron 30.0%
!! ATTATAATTGATGGTGTCTC+AGG + Chr6:95416494-95416513 MsG0680034842.01.T01:CDS 30.0%
!! CAGAATTTTGAAAACAGGTA+CGG + Chr6:95413236-95413255 MsG0680034842.01.T01:intron 30.0%
!! CATACCAGAATTTTGAAAAC+AGG + Chr6:95413231-95413250 MsG0680034842.01.T01:CDS 30.0%
!! CCTCTCATTTTTATCTTCAA+TGG - Chr6:95412009-95412028 None:intergenic 30.0%
!! GCAAACAAAGTGTTGAATAT+GGG + Chr6:95416881-95416900 MsG0680034842.01.T01:CDS 30.0%
!! TGCAAACAAAGTGTTGAATA+TGG + Chr6:95416880-95416899 MsG0680034842.01.T01:CDS 30.0%
!! TTCTCATGTTTTTGCCAAAT+TGG - Chr6:95413863-95413882 None:intergenic 30.0%
!!! CATATGTTGTTTTTGCTGTT+AGG + Chr6:95412095-95412114 MsG0680034842.01.T01:CDS 30.0%
!!! GAATGCTTAGTTTTGATGAT+AGG - Chr6:95414550-95414569 None:intergenic 30.0%
!!! GATTTTTGTTTTTTGTGAGC+AGG + Chr6:95413414-95413433 MsG0680034842.01.T01:intron 30.0%
!!! TCATTTTTTCAGATTGTCAG+TGG - Chr6:95413289-95413308 None:intergenic 30.0%
!!! TGCTTTAGAGATAGATTTTG+AGG + Chr6:95412840-95412859 MsG0680034842.01.T01:CDS 30.0%
!!! TGTTTTTTGTATCATCAGCA+AGG + Chr6:95415476-95415495 MsG0680034842.01.T01:intron 30.0%
AAGGACTTGACTTTACTACT+AGG + Chr6:95412911-95412930 MsG0680034842.01.T01:CDS 35.0%
AATGACCTAGTTAGTGATTG+AGG + Chr6:95417919-95417938 MsG0680034842.01.T01:intron 35.0%
ACAGCAAAAACAACATATGG+TGG - Chr6:95412094-95412113 None:intergenic 35.0%
AGACTATTTCGGACAGTTTA+TGG - Chr6:95415068-95415087 None:intergenic 35.0%
AGAGAATGGGGATTTGATAA+GGG + Chr6:95413440-95413459 MsG0680034842.01.T01:CDS 35.0%
AGCAGGAGATCCAATTAAAT+TGG + Chr6:95413523-95413542 MsG0680034842.01.T01:CDS 35.0%
AGGCTAGTGACGTTAAAAAT+TGG - Chr6:95417758-95417777 None:intergenic 35.0%
AGTACTTACCAAGAAATTGC+TGG + Chr6:95415359-95415378 MsG0680034842.01.T01:CDS 35.0%
AGTGTGACAAGAAACTATTC+AGG - Chr6:95412447-95412466 None:intergenic 35.0%
ATACATCCTAAGTTGTACAC+AGG + Chr6:95412054-95412073 MsG0680034842.01.T01:intron 35.0%
ATATGTCTTTGGATTTGCAG+GGG + Chr6:95418152-95418171 MsG0680034842.01.T01:intron 35.0%
ATCCGACAAAGTGACATAAT+CGG + Chr6:95413835-95413854 MsG0680034842.01.T01:intron 35.0%
ATGACCTAGTTAGTGATTGA+GGG + Chr6:95417920-95417939 MsG0680034842.01.T01:intron 35.0%
ATGGCACTTTCATCTTCTAT+TGG + Chr6:95412886-95412905 MsG0680034842.01.T01:CDS 35.0%
ATTGATCGACGTTCAAATCA+AGG + Chr6:95412521-95412540 MsG0680034842.01.T01:intron 35.0%
CAAACTGATAGATATCGCAA+CGG + Chr6:95416332-95416351 MsG0680034842.01.T01:CDS 35.0%
CAAAGAACAAAAGTTGGCAA+AGG + Chr6:95416934-95416953 MsG0680034842.01.T01:CDS 35.0%
CAAAGTGGTGATCTTTATTC+TGG + Chr6:95418206-95418225 MsG0680034842.01.T01:CDS 35.0%
CAAGGTCTAATTATGCAAAG+TGG + Chr6:95417680-95417699 MsG0680034842.01.T01:intron 35.0%
CAATAATCTTCTCAATGGCA+AGG + Chr6:95416105-95416124 MsG0680034842.01.T01:CDS 35.0%
CTGTTACTATAATATGCGAG+TGG - Chr6:95415760-95415779 None:intergenic 35.0%
CTTGCCATTGAGAAGATTAT+TGG - Chr6:95416107-95416126 None:intergenic 35.0%
GAAACTATGTTCCAATGTTC+AGG - Chr6:95416596-95416615 None:intergenic 35.0%
GAACAAGAGACTAAGAAGTT+TGG + Chr6:95416175-95416194 MsG0680034842.01.T01:CDS 35.0%
GACAAAGTGAAAAACATCAG+CGG + Chr6:95416131-95416150 MsG0680034842.01.T01:CDS 35.0%
GACAGTTAAAAAGGAACAGA+GGG + Chr6:95416762-95416781 MsG0680034842.01.T01:intron 35.0%
GAGAGGTAATTAAAGCCATA+AGG + Chr6:95413013-95413032 MsG0680034842.01.T01:CDS 35.0%
GCTATGGAACTAACATTTCA+TGG - Chr6:95412674-95412693 None:intergenic 35.0%
GGAAAATTTCATTGCTTTGC+AGG + Chr6:95417312-95417331 MsG0680034842.01.T01:intron 35.0%
GGTTCAACTATAGTTCAATC+AGG + Chr6:95411667-95411686 MsG0680034842.01.T01:intron 35.0%
GTATAACGAATGTGCGATTT+CGG - Chr6:95418005-95418024 None:intergenic 35.0%
GTATATGTCTTTGGATTTGC+AGG + Chr6:95418150-95418169 MsG0680034842.01.T01:intron 35.0%
GTCCATAAGTTCAAGAATCT+TGG - Chr6:95414791-95414810 None:intergenic 35.0%
GTGTAACTCAGGTTATCTTA+TGG + Chr6:95414884-95414903 MsG0680034842.01.T01:intron 35.0%
GTTTGATACCGAATGCAAAA+GGG + Chr6:95414500-95414519 MsG0680034842.01.T01:CDS 35.0%
TAGAGAATGGGGATTTGATA+AGG + Chr6:95413439-95413458 MsG0680034842.01.T01:CDS 35.0%
TATAGTTGAACCAGTTCAAC+CGG - Chr6:95411659-95411678 None:intergenic 35.0%
TGACAGTTAAAAAGGAACAG+AGG + Chr6:95416761-95416780 MsG0680034842.01.T01:intron 35.0%
TGACTCTTTGATAAGGCAAA+TGG + Chr6:95412647-95412666 MsG0680034842.01.T01:intron 35.0%
TGCACATAAGCACTTAATCA+AGG - Chr6:95414917-95414936 None:intergenic 35.0%
TGGAGATGAATCAATCAACA+AGG + Chr6:95416538-95416557 MsG0680034842.01.T01:CDS 35.0%
TTAACATATTCCCAGAAACC+AGG - Chr6:95412127-95412146 None:intergenic 35.0%
TTGATCGACGTTCAAATCAA+GGG + Chr6:95412522-95412541 MsG0680034842.01.T01:intron 35.0%
TTTGCTTCTTCTCAGTGAAA+GGG - Chr6:95415632-95415651 None:intergenic 35.0%
TTTGGACGGCTTTCAAATAT+TGG - Chr6:95413754-95413773 None:intergenic 35.0%
TTTGTATCATCAGCAAGGAT+AGG + Chr6:95415481-95415500 MsG0680034842.01.T01:intron 35.0%
! AGCTTAGATTCAATTTTGGG+TGG - Chr6:95417481-95417500 None:intergenic 35.0%
! CGTACCTGTTTTCAAAATTC+TGG - Chr6:95413238-95413257 None:intergenic 35.0%
! TAATAGGTTGAATCGACAAC+CGG - Chr6:95411733-95411752 None:intergenic 35.0%
! TGATGATAGGTTCAAGTTCT+TGG - Chr6:95414537-95414556 None:intergenic 35.0%
! TTCTTTTACACGTGCAAAGT+TGG - Chr6:95417604-95417623 None:intergenic 35.0%
! TTTAACGTCACTAGCCTAAT+TGG + Chr6:95417761-95417780 MsG0680034842.01.T01:intron 35.0%
! TTTTGGTCTAACAGTGATTG+AGG + Chr6:95416418-95416437 MsG0680034842.01.T01:CDS 35.0%
!! AAGAAAGGTACCAATTCCTA+AGG + Chr6:95417336-95417355 MsG0680034842.01.T01:CDS 35.0%
!! AATTGGAATCACTTTTCAGC+AGG + Chr6:95413540-95413559 MsG0680034842.01.T01:CDS 35.0%
!! ACCACGTTTTGTATTTTGAG+CGG + Chr6:95414008-95414027 MsG0680034842.01.T01:intron 35.0%
!! TCTGTTTTGAATCGTTTCTC+TGG + Chr6:95417102-95417121 MsG0680034842.01.T01:intron 35.0%
!! TGGAACATAGTTTCTAAAGC+TGG + Chr6:95416602-95416621 MsG0680034842.01.T01:CDS 35.0%
!! TGTTTGGAACAGTGGATTTT+TGG + Chr6:95416067-95416086 MsG0680034842.01.T01:intron 35.0%
!! TTCAATGCTTTCTGAAGCTT+TGG - Chr6:95413170-95413189 None:intergenic 35.0%
!! TTCTAAACTTGGTGTAACTC+AGG + Chr6:95414873-95414892 MsG0680034842.01.T01:CDS 35.0%
!!! TTTTTTCAGATTGTCAGTGG+TGG - Chr6:95413286-95413305 None:intergenic 35.0%
AAAACGCCGTACGTCATTAT+TGG - Chr6:95413780-95413799 None:intergenic 40.0%
AAAAGCAGAAGCTACTTCCA+AGG + Chr6:95417399-95417418 MsG0680034842.01.T01:CDS 40.0%
AAAAGGAACAGAGGGAGTAA+CGG + Chr6:95416770-95416789 MsG0680034842.01.T01:intron 40.0%
AAAGCAGAAGCTACTTCCAA+GGG + Chr6:95417400-95417419 MsG0680034842.01.T01:CDS 40.0%
AACTGCAAAGTCAGTTCAGA+TGG + Chr6:95416300-95416319 MsG0680034842.01.T01:CDS 40.0%
AAGATCTATGCGTGTCATGT+AGG + Chr6:95417878-95417897 MsG0680034842.01.T01:intron 40.0%
AATGATGACAACTGGGTTTG+AGG - Chr6:95417457-95417476 None:intergenic 40.0%
AATTTGAACTTCGGCCCTTT+AGG - Chr6:95412707-95412726 None:intergenic 40.0%
ACATTCTTAGAGTCCCTTTC+TGG + Chr6:95414572-95414591 MsG0680034842.01.T01:CDS 40.0%
ACCGCTCAAAATACAAAACG+TGG - Chr6:95414012-95414031 None:intergenic 40.0%
AGAAGGGAATTCTATCCCAA+TGG + Chr6:95414599-95414618 MsG0680034842.01.T01:CDS 40.0%
ATAGTTGAACCAGTTCAACC+GGG - Chr6:95411658-95411677 None:intergenic 40.0%
ATGTCCCTCAATCACTAACT+AGG - Chr6:95417927-95417946 None:intergenic 40.0%
CCAAAAGCTTCATACAATGC+TGG - Chr6:95416404-95416423 None:intergenic 40.0%
CGTTTGATACCGAATGCAAA+AGG + Chr6:95414499-95414518 MsG0680034842.01.T01:CDS 40.0%
CTTACCAAGAAATTGCTGGA+AGG + Chr6:95415363-95415382 MsG0680034842.01.T01:CDS 40.0%
CTTGAAGTAGAAGCCATTTG+AGG - Chr6:95411258-95411277 None:intergenic 40.0%
CTTTGCTTCTTCTCAGTGAA+AGG - Chr6:95415633-95415652 None:intergenic 40.0%
CTTTGTCGGATGTTACAACA+AGG - Chr6:95413826-95413845 None:intergenic 40.0%
GAACTAGCTGCTAAACAAAG+TGG + Chr6:95418191-95418210 MsG0680034842.01.T01:CDS 40.0%
GAAGGGAATTCTATCCCAAT+GGG + Chr6:95414600-95414619 MsG0680034842.01.T01:CDS 40.0%
GACAATGAGAATGCTTTCTG+AGG + Chr6:95413493-95413512 MsG0680034842.01.T01:CDS 40.0%
GCAAGACTAATCCTGAACAT+TGG + Chr6:95416582-95416601 MsG0680034842.01.T01:CDS 40.0%
GGAAAACCTGACCTCATTAT+TGG + Chr6:95414811-95414830 MsG0680034842.01.T01:CDS 40.0%
GGGACATGATTATCACAAGA+TGG + Chr6:95417940-95417959 MsG0680034842.01.T01:intron 40.0%
GTGTGAGTTTCATATTGTCC+TGG - Chr6:95415507-95415526 None:intergenic 40.0%
TAGCATACCACAAGAATCTG+AGG - Chr6:95414262-95414281 None:intergenic 40.0%
TATTCCCAGAAACCAGGATT+AGG - Chr6:95412121-95412140 None:intergenic 40.0%
TCAACCTTCCAGCAATTTCT+TGG - Chr6:95415370-95415389 None:intergenic 40.0%
TCTTTATTGGGACTAACAGG+TGG + Chr6:95414159-95414178 MsG0680034842.01.T01:intron 40.0%
TGACACGACACCAAAACATT+TGG - Chr6:95413327-95413346 None:intergenic 40.0%
TGATTTCACCACACCTCATA+TGG + Chr6:95412867-95412886 MsG0680034842.01.T01:CDS 40.0%
TGTGAGCAGGTTTAGAGAAT+GGG + Chr6:95413427-95413446 MsG0680034842.01.T01:intron 40.0%
TTGTGAGCAGGTTTAGAGAA+TGG + Chr6:95413426-95413445 MsG0680034842.01.T01:intron 40.0%
TTTCTCCAAAGCATGAGCAA+TGG - Chr6:95415225-95415244 None:intergenic 40.0%
! ACTTTTGCAACAAACCAAGG+TGG + Chr6:95416461-95416480 MsG0680034842.01.T01:CDS 40.0%
! ATGAGAGGAAAAGCTTTTGG+AGG + Chr6:95412021-95412040 MsG0680034842.01.T01:intron 40.0%
! ATTCTTTGGCTTAGTCCCTA+AGG - Chr6:95418037-95418056 None:intergenic 40.0%
! CATGTTGTCCCTTTTGCATT+CGG - Chr6:95414511-95414530 None:intergenic 40.0%
! CCAACTTTTGCAACAAACCA+AGG + Chr6:95416458-95416477 MsG0680034842.01.T01:CDS 40.0%
! CCAGCATTGTATGAAGCTTT+TGG + Chr6:95416401-95416420 MsG0680034842.01.T01:CDS 40.0%
! GCAGATGATTTGGAAGTAGA+TGG + Chr6:95412154-95412173 MsG0680034842.01.T01:CDS 40.0%
! GGCTTTCAAATATTGGTCTG+CGG - Chr6:95413747-95413766 None:intergenic 40.0%
! GGGACATTTTATGGTACATG+TGG + Chr6:95413717-95413736 MsG0680034842.01.T01:intron 40.0%
! TGACATTGGTTGAGGTTCTT+GGG - Chr6:95417365-95417384 None:intergenic 40.0%
! TGAGAGGAAAAGCTTTTGGA+GGG + Chr6:95412022-95412041 MsG0680034842.01.T01:intron 40.0%
! TGGGATCAGTTTATGGGTTT+TGG + Chr6:95416900-95416919 MsG0680034842.01.T01:CDS 40.0%
! TTACCTCTCCTTGGTGATTA+AGG - Chr6:95413002-95413021 None:intergenic 40.0%
! TTCAATGGCAGGTTGAAAAG+TGG - Chr6:95415661-95415680 None:intergenic 40.0%
! TTGACATTGGTTGAGGTTCT+TGG - Chr6:95417366-95417385 None:intergenic 40.0%
! TTTCAAATATTGGTCTGCGG+TGG - Chr6:95413744-95413763 None:intergenic 40.0%
!! AAGCTTTTGGAGGGCTTATT+CGG + Chr6:95412031-95412050 MsG0680034842.01.T01:intron 40.0%
!! AAGTCAGTTCAGATGGATTG+CGG + Chr6:95416307-95416326 MsG0680034842.01.T01:CDS 40.0%
!! ATGGAAACGGCTTTGTTTCA+AGG - Chr6:95411328-95411347 None:intergenic 40.0%
!! CCTTGGTTTGTTGCAAAAGT+TGG - Chr6:95416461-95416480 None:intergenic 40.0%
!! GAAACAGGTTGGTTGCAAAT+GGG + Chr6:95411937-95411956 MsG0680034842.01.T01:intron 40.0%
!! GAAGATGAAAGTGCCATATG+AGG - Chr6:95412883-95412902 None:intergenic 40.0%
!! GACTGAGACTTTGACTTGAT+TGG - Chr6:95413949-95413968 None:intergenic 40.0%
!! TGAAACAGGTTGGTTGCAAA+TGG + Chr6:95411936-95411955 MsG0680034842.01.T01:intron 40.0%
!! TGATCAAGTAAGAGCACTAG+AGG + Chr6:95414192-95414211 MsG0680034842.01.T01:CDS 40.0%
!! TGGCTTTAATTACCTCTCCT+TGG - Chr6:95413011-95413030 None:intergenic 40.0%
!!! GGAAGTAGCTTCTGCTTTTT+TGG - Chr6:95417398-95417417 None:intergenic 40.0%
AAGCAGAAGCTACTTCCAAG+GGG + Chr6:95417401-95417420 MsG0680034842.01.T01:CDS 45.0%
AAGCCTTAATCACCAAGGAG+AGG + Chr6:95412996-95413015 MsG0680034842.01.T01:CDS 45.0%
AAGTCAAAGTCTCAGTCGTG+AGG + Chr6:95413952-95413971 MsG0680034842.01.T01:intron 45.0%
AAGTTCAACATTGCTGCTCC+AGG + Chr6:95415585-95415604 MsG0680034842.01.T01:CDS 45.0%
AATGGGGATTTGATAAGGGC+TGG + Chr6:95413444-95413463 MsG0680034842.01.T01:CDS 45.0%
ATCGAAACGCGAAACCCATT+GGG - Chr6:95414617-95414636 None:intergenic 45.0%
ATGGGGATTTGATAAGGGCT+GGG + Chr6:95413445-95413464 MsG0680034842.01.T01:CDS 45.0%
ATTCCCTTCTCTGTCCAGAA+AGG - Chr6:95414589-95414608 None:intergenic 45.0%
CACGCCGATGAAACATAGAA+AGG - Chr6:95414409-95414428 None:intergenic 45.0%
CAGGGGTGAATCTTCAAGTA+AGG + Chr6:95418169-95418188 MsG0680034842.01.T01:intron 45.0%
CATCCTAAGTTGTACACAGG+AGG + Chr6:95412057-95412076 MsG0680034842.01.T01:intron 45.0%
CATTGCTTTGCAGGCAAGAA+AGG + Chr6:95417321-95417340 MsG0680034842.01.T01:intron 45.0%
GGAGCAGCAATGTTGAACTT+TGG - Chr6:95415585-95415604 None:intergenic 45.0%
GTGAGCAGGTTTAGAGAATG+GGG + Chr6:95413428-95413447 MsG0680034842.01.T01:intron 45.0%
GTGATTGAGGCAATGAACTG+TGG + Chr6:95416431-95416450 MsG0680034842.01.T01:CDS 45.0%
TAATTTCAGCTGGACCACCT+TGG - Chr6:95416478-95416497 None:intergenic 45.0%
TAGACAGATTGATCAGCTCC+TGG - Chr6:95415606-95415625 None:intergenic 45.0%
TAGGCCTAATCCTGGTTTCT+GGG + Chr6:95412114-95412133 MsG0680034842.01.T01:CDS 45.0%
TATCGAAACGCGAAACCCAT+TGG - Chr6:95414618-95414637 None:intergenic 45.0%
TCAAACGTGTAACCTGTGCA+TGG - Chr6:95414486-95414505 None:intergenic 45.0%
TCACACTGCATTTACCATGC+CGG + Chr6:95415521-95415540 MsG0680034842.01.T01:CDS 45.0%
TGACATAATCGGCGCCAATT+TGG + Chr6:95413846-95413865 MsG0680034842.01.T01:intron 45.0%
TGTCGGATGTTACAACAAGG+AGG - Chr6:95413823-95413842 None:intergenic 45.0%
TGTGAAGCCTCAGATTCTTG+TGG + Chr6:95414252-95414271 MsG0680034842.01.T01:CDS 45.0%
TTAGGCCTAATCCTGGTTTC+TGG + Chr6:95412113-95412132 MsG0680034842.01.T01:CDS 45.0%
TTCCCTTCTCTGTCCAGAAA+GGG - Chr6:95414588-95414607 None:intergenic 45.0%
TTGGCAGGAGTTGTTGACAT+TGG - Chr6:95417379-95417398 None:intergenic 45.0%
TTTAGGTCACGCTCTTGCTA+TGG - Chr6:95412690-95412709 None:intergenic 45.0%
! AATTGAACCGGCGAGACTTT+TGG + Chr6:95411538-95411557 MsG0680034842.01.T01:intron 45.0%
! ATAGCAAGAGCGTGACCTAA+AGG + Chr6:95412689-95412708 MsG0680034842.01.T01:intron 45.0%
! ATTGAACCGGCGAGACTTTT+GGG + Chr6:95411539-95411558 MsG0680034842.01.T01:intron 45.0%
! CTTTTGTATCCGCGATGCAT+CGG - Chr6:95416367-95416386 None:intergenic 45.0%
! GACATTGGTTGAGGTTCTTG+GGG - Chr6:95417364-95417383 None:intergenic 45.0%
! GGACTGTGGACTTCTACTTT+TGG + Chr6:95413982-95414001 MsG0680034842.01.T01:intron 45.0%
! GGAGTTGTTGACATTGGTTG+AGG - Chr6:95417373-95417392 None:intergenic 45.0%
! GGGTGGTAATGATGACAACT+GGG - Chr6:95417464-95417483 None:intergenic 45.0%
! GGTTGGTTGCAAATGGGAAA+CGG + Chr6:95411943-95411962 MsG0680034842.01.T01:intron 45.0%
! TAGCAAGAGCGTGACCTAAA+GGG + Chr6:95412690-95412709 MsG0680034842.01.T01:intron 45.0%
! TCTTGGGGTACCTTAGGAAT+TGG - Chr6:95417349-95417368 None:intergenic 45.0%
! TGGGTGGTAATGATGACAAC+TGG - Chr6:95417465-95417484 None:intergenic 45.0%
!! CGCCGATTATGTCACTTTGT+CGG - Chr6:95413840-95413859 None:intergenic 45.0%
!! CTTTCTGAGGTACTAGAAGC+AGG + Chr6:95413506-95413525 MsG0680034842.01.T01:CDS 45.0%
!! TGAAAGTGCCATATGAGGTG+TGG - Chr6:95412878-95412897 None:intergenic 45.0%
!! TTTGCTGTTAGGCCTAATCC+TGG + Chr6:95412106-95412125 MsG0680034842.01.T01:CDS 45.0%
!!! GTAGCTTCTGCTTTTTTGGC+AGG - Chr6:95417394-95417413 None:intergenic 45.0%
!! TAGAAAAAATAAATAAATTA+AGG - Chr6:95412776-95412795 None:intergenic 5.0%
!!! TAATTTGTAAAAAAAAAAAT+TGG - Chr6:95414321-95414340 None:intergenic 5.0%
!!! TTATTTATTTTTTCTAAAAA+AGG + Chr6:95412780-95412799 MsG0680034842.01.T01:intron 5.0%
AGAGCTTTACCGATGCATCG+CGG + Chr6:95416355-95416374 MsG0680034842.01.T01:CDS 50.0%
AGTCCCTTTCTGGACAGAGA+AGG + Chr6:95414582-95414601 MsG0680034842.01.T01:CDS 50.0%
ATCATCAGCAAGGATAGGCC+AGG + Chr6:95415486-95415505 MsG0680034842.01.T01:intron 50.0%
CACACTGCATTTACCATGCC+GGG + Chr6:95415522-95415541 MsG0680034842.01.T01:CDS 50.0%
CGATGCATCGCGGATACAAA+AGG + Chr6:95416365-95416384 MsG0680034842.01.T01:CDS 50.0%
CTATGACCCAAAAGTCTCGC+CGG - Chr6:95411548-95411567 None:intergenic 50.0%
CTGCCTCCTGTGTACAACTT+AGG - Chr6:95412063-95412082 None:intergenic 50.0%
GAGACTACACGACAAAGTCC+CGG - Chr6:95415543-95415562 None:intergenic 50.0%
GCAATCCTAGGACATCTGCT+TGG - Chr6:95413616-95413635 None:intergenic 50.0%
GGACTTTGTCGTGTAGTCTC+TGG + Chr6:95415543-95415562 MsG0680034842.01.T01:CDS 50.0%
GGCAACCATTGCTCATGCTT+TGG + Chr6:95415217-95415236 MsG0680034842.01.T01:intron 50.0%
GTCCCTTTCTGGACAGAGAA+GGG + Chr6:95414583-95414602 MsG0680034842.01.T01:CDS 50.0%
TCTCAGTCGTGAGGACAAAG+AGG + Chr6:95413961-95413980 MsG0680034842.01.T01:intron 50.0%
TCTTCGCAAACCACTCGACT+AGG - Chr6:95416157-95416176 None:intergenic 50.0%
TGGGGATTTGATAAGGGCTG+GGG + Chr6:95413446-95413465 MsG0680034842.01.T01:CDS 50.0%
TTGAACCAGTTCAACCGGGT+CGG - Chr6:95411654-95411673 None:intergenic 50.0%
TTTGGCCAAGCAGATGTCCT+AGG + Chr6:95413608-95413627 MsG0680034842.01.T01:CDS 50.0%
! ACTAGCCTAATTGGCCGATG+TGG + Chr6:95417770-95417789 MsG0680034842.01.T01:intron 50.0%
! GAAAGTTGGTTGAACCGACC+CGG + Chr6:95411637-95411656 MsG0680034842.01.T01:intron 50.0%
! GCAAGACTTGTTCGCCACAT+CGG - Chr6:95417787-95417806 None:intergenic 50.0%
! GGATTACGTTGGTTGCTTCC+AGG + Chr6:95418227-95418246 MsG0680034842.01.T01:CDS 50.0%
! TGAGGTTCTTGGGGTACCTT+AGG - Chr6:95417355-95417374 None:intergenic 50.0%
!! CGGCTTTGTTTCAAGGCATC+AGG - Chr6:95411321-95411340 None:intergenic 50.0%
!! TTTGGTGTCGTGTCACTGTG+CGG + Chr6:95413332-95413351 MsG0680034842.01.T01:intron 50.0%
AAAACCTGGCCTCCAGTGTC+TGG - Chr6:95413638-95413657 None:intergenic 55.0%
CGCTAACGTGTTCCATGCAC+AGG + Chr6:95414471-95414490 MsG0680034842.01.T01:intron 55.0%
CGTGAGGACAAAGAGGACTG+TGG + Chr6:95413968-95413987 MsG0680034842.01.T01:intron 55.0%
CTAGGATTGCCAGACACTGG+AGG + Chr6:95413626-95413645 MsG0680034842.01.T01:CDS 55.0%
CTCCAGTGTCTGGCAATCCT+AGG - Chr6:95413628-95413647 None:intergenic 55.0%
CTGGGGAAACACTGCAGGAA+GGG + Chr6:95413463-95413482 MsG0680034842.01.T01:CDS 55.0%
GTCCTAGGATTGCCAGACAC+TGG + Chr6:95413623-95413642 MsG0680034842.01.T01:CDS 55.0%
GTTCGCCACATCGGCCAATT+AGG - Chr6:95417778-95417797 None:intergenic 55.0%
TACACGACAAAGTCCCGGCA+TGG - Chr6:95415538-95415557 None:intergenic 55.0%
TTGAACCGACCCGGTTGAAC+TGG + Chr6:95411646-95411665 MsG0680034842.01.T01:intron 55.0%
TTGTGCTGCATCATGCCCCT+TGG - Chr6:95417419-95417438 None:intergenic 55.0%
!! CAGATTGTCAGTGGTGGACG+TGG - Chr6:95413280-95413299 None:intergenic 55.0%
AAGGGCTGGGGAAACACTGC+AGG + Chr6:95413458-95413477 MsG0680034842.01.T01:CDS 60.0%
ACATCAGCGGCCTAGTCGAG+TGG + Chr6:95416144-95416163 MsG0680034842.01.T01:CDS 60.0%
ATTGCCAGACACTGGAGGCC+AGG + Chr6:95413631-95413650 MsG0680034842.01.T01:CDS 60.0%
GCTGGGGAAACACTGCAGGA+AGG + Chr6:95413462-95413481 MsG0680034842.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr6 gene 95411195 95418499 95411195 ID=MsG0680034842.01;Name=MsG0680034842.01
Chr6 mRNA 95411195 95418499 95411195 ID=MsG0680034842.01.T01;Parent=MsG0680034842.01;Name=MsG0680034842.01.T01;_AED=0.41;_eAED=0.41;_QI=66|0.78|0.73|1|1|1|15|180|865
Chr6 exon 95411195 95411367 95411195 ID=MsG0680034842.01.T01:exon:6379;Parent=MsG0680034842.01.T01
Chr6 exon 95411944 95411968 95411944 ID=MsG0680034842.01.T01:exon:6380;Parent=MsG0680034842.01.T01
Chr6 exon 95412076 95412230 95412076 ID=MsG0680034842.01.T01:exon:6381;Parent=MsG0680034842.01.T01
Chr6 exon 95412825 95413035 95412825 ID=MsG0680034842.01.T01:exon:6382;Parent=MsG0680034842.01.T01
Chr6 exon 95413134 95413252 95413134 ID=MsG0680034842.01.T01:exon:6383;Parent=MsG0680034842.01.T01
Chr6 exon 95413436 95413652 95413436 ID=MsG0680034842.01.T01:exon:6384;Parent=MsG0680034842.01.T01
Chr6 exon 95414178 95414273 95414178 ID=MsG0680034842.01.T01:exon:6385;Parent=MsG0680034842.01.T01
Chr6 exon 95414493 95414621 95414493 ID=MsG0680034842.01.T01:exon:6386;Parent=MsG0680034842.01.T01
Chr6 exon 95414778 95414894 95414778 ID=MsG0680034842.01.T01:exon:6387;Parent=MsG0680034842.01.T01
Chr6 exon 95415218 95415384 95415218 ID=MsG0680034842.01.T01:exon:6388;Parent=MsG0680034842.01.T01
Chr6 exon 95415494 95415718 95415494 ID=MsG0680034842.01.T01:exon:6389;Parent=MsG0680034842.01.T01
Chr6 exon 95416079 95416645 95416079 ID=MsG0680034842.01.T01:exon:6390;Parent=MsG0680034842.01.T01
Chr6 exon 95416862 95417000 95416862 ID=MsG0680034842.01.T01:exon:6391;Parent=MsG0680034842.01.T01
Chr6 exon 95417334 95417509 95417334 ID=MsG0680034842.01.T01:exon:6392;Parent=MsG0680034842.01.T01
Chr6 exon 95418172 95418499 95418172 ID=MsG0680034842.01.T01:exon:6393;Parent=MsG0680034842.01.T01
Chr6 five_prime_UTR 95411195 95411260 95411195 ID=MsG0680034842.01.T01:five_prime_utr;Parent=MsG0680034842.01.T01
Chr6 CDS 95411261 95411367 95411261 ID=MsG0680034842.01.T01:cds;Parent=MsG0680034842.01.T01
Chr6 CDS 95411944 95411968 95411944 ID=MsG0680034842.01.T01:cds;Parent=MsG0680034842.01.T01
Chr6 CDS 95412076 95412230 95412076 ID=MsG0680034842.01.T01:cds;Parent=MsG0680034842.01.T01
Chr6 CDS 95412825 95413035 95412825 ID=MsG0680034842.01.T01:cds;Parent=MsG0680034842.01.T01
Chr6 CDS 95413134 95413252 95413134 ID=MsG0680034842.01.T01:cds;Parent=MsG0680034842.01.T01
Chr6 CDS 95413436 95413652 95413436 ID=MsG0680034842.01.T01:cds;Parent=MsG0680034842.01.T01
Chr6 CDS 95414178 95414273 95414178 ID=MsG0680034842.01.T01:cds;Parent=MsG0680034842.01.T01
Chr6 CDS 95414493 95414621 95414493 ID=MsG0680034842.01.T01:cds;Parent=MsG0680034842.01.T01
Chr6 CDS 95414778 95414894 95414778 ID=MsG0680034842.01.T01:cds;Parent=MsG0680034842.01.T01
Chr6 CDS 95415218 95415384 95415218 ID=MsG0680034842.01.T01:cds;Parent=MsG0680034842.01.T01
Chr6 CDS 95415494 95415718 95415494 ID=MsG0680034842.01.T01:cds;Parent=MsG0680034842.01.T01
Chr6 CDS 95416079 95416645 95416079 ID=MsG0680034842.01.T01:cds;Parent=MsG0680034842.01.T01
Chr6 CDS 95416862 95417000 95416862 ID=MsG0680034842.01.T01:cds;Parent=MsG0680034842.01.T01
Chr6 CDS 95417334 95417509 95417334 ID=MsG0680034842.01.T01:cds;Parent=MsG0680034842.01.T01
Chr6 CDS 95418172 95418319 95418172 ID=MsG0680034842.01.T01:cds;Parent=MsG0680034842.01.T01
Chr6 three_prime_UTR 95418320 95418499 95418320 ID=MsG0680034842.01.T01:three_prime_utr;Parent=MsG0680034842.01.T01
Gene Sequence

>MsG0680034842.01.T01

ATGGCTTCTACTTCAAGTTCTGCTTTGAAAAGATCTGATTCAATTGCTGATAGCATGCCTGATGCCTTGAAACAAAGCCGTTTCCATATGAAGAAATGCTTTGCTAGGTTGGTTGCAAATGGGAAACGGTTAGAGGCAGCTATTGTTCCACCATATGTTGTTTTTGCTGTTAGGCCTAATCCTGGTTTCTGGGAATATGTTAAAGTGAATGCAGATGATTTGGAAGTAGATGGTATTGAGCCTTCAGAATACTTGAAATACAAGGAAATGGTATTTGATGAGAAGTGGGCAAATGATGAAAATGCTTTAGAGATAGATTTTGAGGCTATTGATTTCACCACACCTCATATGGCACTTTCATCTTCTATTGGAAAAGGACTTGACTTTACTACTAGGATCTTGACTTCAAGATTGAGTGAGAGCTCACATTGTGAAAATCCATTGCTTAATTACTTATTAAGCCTTAATCACCAAGGAGAGGTAATTAAAGCCATAAGGAATCTTATGATCAAAGACACTTTGAATACAATACCAAAGCTTCAGAAAGCATTGAATCTAGCAGAAGCATATGTATCTGCACATCACAAAGATACACCATACCAGAATTTTGAAAACAGGTTTAGAGAATGGGGATTTGATAAGGGCTGGGGAAACACTGCAGGAAGGGTAAAAGAGACAATGAGAATGCTTTCTGAGGTACTAGAAGCAGGAGATCCAATTAAATTGGAATCACTTTTCAGCAGGCTACCAAACATGTTCAACATTGTTATTTTCTCTATTCATGGATATTTTGGCCAAGCAGATGTCCTAGGATTGCCAGACACTGGAGGCCAGGTGGTATACATTCTTGATCAAGTAAGAGCACTAGAGGAAGAATTACTCCAAAAGATTGAATTACAAGGTCTTAATGTGAAGCCTCAGATTCTTGTGGTTACACGTTTGATACCGAATGCAAAAGGGACAACATGTAACCAAGAACTTGAACCTATCATCAAAACTAAGCATTCACACATTCTTAGAGTCCCTTTCTGGACAGAGAAGGGAATTCTATCCCAATGGGATTCTACTACCAAGATTCTTGAACTTATGGACGGAAAACCTGACCTCATTATTGGAAATTATACTGATGGAAACTTGGTTTCATCTTTAATGGCTTCTAAACTTGGTGTAACTCAGGCAACCATTGCTCATGCTTTGGAGAAAACAAAATATGAAGATTCAGATGCTAAATGGAATAGTTTTGAAGAAAAGTATCACTTTTCAAGTCAGTTCACAGCTGATCTAATCGCAATGAATTCCGCTGATTTTATCATAACTAGTACTTACCAAGAAATTGCTGGAAGCAAGGATAGGCCAGGACAATATGAAACTCACACTGCATTTACCATGCCGGGACTTTGTCGTGTAGTCTCTGGCATCAGTGTATTTGATCCAAAGTTCAACATTGCTGCTCCAGGAGCTGATCAATCTGTCTACTTCCCTTTCACTGAGAAGAAGCAAAGATTGACCACTTTTCAACCTGCCATTGAAGAATTACTTTATAGTAAGGTTGAAAATGAAGAACACATTGGATTTTTGGAAGACAAGAAGAAACCAATAATCTTCTCAATGGCAAGGCTTGACAAAGTGAAAAACATCAGCGGCCTAGTCGAGTGGTTTGCGAAGAACAAGAGACTAAGAAGTTTGGTAAATCTTGTAATTGTTGGCGGATTCTTTGATCCGTCAAAATCCAAAGATAGAGAAGAAACAGAAGAAATCAAGAAAATGCATTACTTGATGAAAGAATACAAACTGCAAAGTCAGTTCAGATGGATTGCGGCACAAACTGATAGATATCGCAACGGAGAGCTTTACCGATGCATCGCGGATACAAAAGGAGCATTTGTTCAACCAGCATTGTATGAAGCTTTTGGTCTAACAGTGATTGAGGCAATGAACTGTGGATTACCAACTTTTGCAACAAACCAAGGTGGTCCAGCTGAAATTATAATTGATGGTGTCTCAGGTTTTCATATTGATCCTCATAATGGAGATGAATCAATCAACAAGGTTTCTGAATTTTTTGAGAAGTGCAAGACTAATCCTGAACATTGGAACATAGTTTCTAAAGCTGGTCTTCAAAGAATCAATGAATGCTATACATGGAAGATATATGCAAACAAAGTGTTGAATATGGGATCAGTTTATGGGTTTTGGAGAAAGTTGAACAAAGAACAAAAGTTGGCAAAGGAAAGATACATACAAATGTTTTATAATCTTCAATTTAGGAACTTGGCAAGAAAGGTACCAATTCCTAAGGTACCCCAAGAACCTCAACCAATGTCAACAACTCCTGCCAAAAAAGCAGAAGCTACTTCCAAGGGGCATGATGCAGCACAAGCAAAAGCTGAAGTACCTCAAACCCAGTTGTCATCATTACCACCCAAAATTGAATCTAAGCTAACATCAAGGGGTGAATCTTCAAGTAAGGAACTAGCTGCTAAACAAAGTGGTGATCTTTATTCTGGATTACGTTGGTTGCTTCCAGGAATTGCTTTTATGTTCATCATTCATTATCTCTTTAAGTATTTGGAACATTTATTCACACGGGAGCAATAA

Protein sequence

>MsG0680034842.01.T01

MASTSSSALKRSDSIADSMPDALKQSRFHMKKCFARLVANGKRLEAAIVPPYVVFAVRPNPGFWEYVKVNADDLEVDGIEPSEYLKYKEMVFDEKWANDENALEIDFEAIDFTTPHMALSSSIGKGLDFTTRILTSRLSESSHCENPLLNYLLSLNHQGEVIKAIRNLMIKDTLNTIPKLQKALNLAEAYVSAHHKDTPYQNFENRFREWGFDKGWGNTAGRVKETMRMLSEVLEAGDPIKLESLFSRLPNMFNIVIFSIHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLQKIELQGLNVKPQILVVTRLIPNAKGTTCNQELEPIIKTKHSHILRVPFWTEKGILSQWDSTTKILELMDGKPDLIIGNYTDGNLVSSLMASKLGVTQATIAHALEKTKYEDSDAKWNSFEEKYHFSSQFTADLIAMNSADFIITSTYQEIAGSKDRPGQYETHTAFTMPGLCRVVSGISVFDPKFNIAAPGADQSVYFPFTEKKQRLTTFQPAIEELLYSKVENEEHIGFLEDKKKPIIFSMARLDKVKNISGLVEWFAKNKRLRSLVNLVIVGGFFDPSKSKDREETEEIKKMHYLMKEYKLQSQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPHNGDESINKVSEFFEKCKTNPEHWNIVSKAGLQRINECYTWKIYANKVLNMGSVYGFWRKLNKEQKLAKERYIQMFYNLQFRNLARKVPIPKVPQEPQPMSTTPAKKAEATSKGHDAAQAKAEVPQTQLSSLPPKIESKLTSRGESSSKELAAKQSGDLYSGLRWLLPGIAFMFIIHYLFKYLEHLFTREQ*