AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047596.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047596.01.T01 MTR_4g130880 98.667 375 5 0 1 375 1 375 0.0 762
MsG0880047596.01.T01 MTR_4g130880 96.512 258 9 0 1 258 1 258 0.0 506
MsG0880047596.01.T01 MTR_4g007070 52.699 389 141 9 4 374 2 365 6.46e-119 349
MsG0880047596.01.T01 MTR_3g111690 54.357 241 100 2 107 346 96 327 5.01e-95 287
MsG0880047596.01.T01 MTR_0009s0230 53.927 191 88 0 148 338 112 302 2.77e-78 243
MsG0880047596.01.T01 MTR_0009s0230 53.927 191 87 1 148 338 112 301 1.15e-76 239
MsG0880047596.01.T01 MTR_2g063510 52.332 193 90 1 145 337 198 388 3.44e-70 225
MsG0880047596.01.T01 MTR_8g447000 51.579 190 90 1 145 334 192 379 7.45e-70 224
MsG0880047596.01.T01 MTR_8g066040 47.115 208 93 2 148 338 116 323 5.20e-68 218
MsG0880047596.01.T01 MTR_2g063510 46.610 118 59 2 145 260 198 313 9.65e-28 111
MsG0880047596.01.T01 MTR_8g447000 44.954 109 58 1 145 253 192 298 6.44e-27 109
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047596.01.T01 AT5G57970 63.372 344 116 2 4 338 2 344 3.95e-156 443
MsG0880047596.01.T01 AT5G57970 63.372 344 116 2 4 338 2 344 3.95e-156 443
MsG0880047596.01.T01 AT1G15970 52.663 338 147 4 7 338 5 335 1.68e-108 322
MsG0880047596.01.T01 AT1G15970 52.663 338 147 4 7 338 5 335 1.68e-108 322
MsG0880047596.01.T01 AT1G80850 50.867 346 136 7 4 338 2 324 4.21e-104 310
MsG0880047596.01.T01 AT1G75090 60.209 191 76 0 148 338 119 309 2.99e-87 267
MsG0880047596.01.T01 AT1G13635 48.691 191 98 0 148 338 115 305 3.15e-72 228
MsG0880047596.01.T01 AT1G13635 48.691 191 98 0 148 338 115 305 3.15e-72 228
MsG0880047596.01.T01 AT3G12710 50.000 190 93 1 148 337 122 309 1.44e-66 213
MsG0880047596.01.T01 AT5G44680 49.495 198 88 2 145 337 161 351 6.44e-66 213

Find 140 sgRNAs with CRISPR-Local

Find 353 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTAATATACCTTTGATATT+TGG 0.167727 8:+88498292 None:intergenic
CATTAGTTGCTTCAGATTTC+AGG 0.175137 8:-88496872 MsG0880047596.01.T01:CDS
AACACAAATCTTTCTAATTT+AGG 0.190089 8:+88500063 None:intergenic
GCTGATTGGATTTAAGAAAA+TGG 0.195009 8:+88500353 None:intergenic
ATTTCTTTGAAACCCAAAAT+TGG 0.214254 8:+88500311 None:intergenic
ACTGAGAAAGGCTGAGAAAT+TGG 0.233316 8:-88499914 MsG0880047596.01.T01:CDS
GATCCAAGCACACCTCTTCT+TGG 0.242214 8:+88499603 None:intergenic
AGAAGCATCTTTCTTCTCTT+TGG 0.257673 8:+88499873 None:intergenic
CGAGAAAATGCTGGGGAAAA+AGG 0.273608 8:+88500592 None:intergenic
TGCTGTTGTATGAAGCTTTC+CGG 0.274511 8:-88496601 MsG0880047596.01.T01:three_prime_UTR
CGGGAACCTGTCGGGGATAT+CGG 0.276657 8:+88497013 None:intergenic
TTGCTAATAACTTCAGCTTT+TGG 0.286287 8:+88496982 None:intergenic
CCGTCAGAAACAACACTTCT+TGG 0.294148 8:+88499661 None:intergenic
TTCATTTCATTTCATTATAC+AGG 0.297306 8:-88496471 MsG0880047596.01.T01:three_prime_UTR
GGATGGAAGCCTTAACAAAT+TGG 0.319021 8:-88496580 MsG0880047596.01.T01:three_prime_UTR
CAAAATTGGAAACCTATAAA+AGG 0.320600 8:+88500325 None:intergenic
ATTGGGCAAGGAGGTTGATT+TGG 0.323664 8:-88499896 MsG0880047596.01.T01:CDS
CTGATTGGATTTAAGAAAAT+GGG 0.336198 8:+88500354 None:intergenic
GAGTGGAACAAACCAGTATT+AGG 0.345968 8:+88499577 None:intergenic
TTGAGCATCCTCATTCTTGA+TGG 0.348083 8:+88496813 None:intergenic
TATAAAAGGTTGAAGCTGAT+TGG 0.349710 8:+88500339 None:intergenic
TGGAAGCAAAATTAGGGTTT+AGG 0.358709 8:+88500386 None:intergenic
CGGTGATTGATTGTGTGTAT+TGG 0.369419 8:-88500098 MsG0880047596.01.T01:five_prime_UTR
TCATGGAAAGCAGCATAATA+TGG 0.372996 8:+88498802 None:intergenic
TGCCAGGTCATAGTAGAGTT+TGG 0.373213 8:-88497093 MsG0880047596.01.T01:intron
TTTGTGTTAATGTCAGCTTC+AGG 0.378827 8:-88500048 MsG0880047596.01.T01:exon
GATGAATGCTTCGTGTTCTT+CGG 0.379133 8:-88499779 MsG0880047596.01.T01:CDS
AACAATGCAGAACGGAATCT+TGG 0.379953 8:-88500456 MsG0880047596.01.T01:five_prime_UTR
GGTCATTCGACAATTACATT+TGG 0.384849 8:-88497071 MsG0880047596.01.T01:CDS
AAGGAACTTGTAGTGGTTCC+TGG 0.388803 8:+88498357 None:intergenic
AGAATGAATCACAGTAAATC+TGG 0.393677 8:-88496722 MsG0880047596.01.T01:exon
TTCTTGGATTGTGCACCATC+AGG 0.399421 8:+88499619 None:intergenic
AATTCTACACCAATTTGTTA+AGG 0.403877 8:+88496571 None:intergenic
TTTCATAGCCGAGCTTCTAC+TGG 0.408353 8:-88499739 MsG0880047596.01.T01:CDS
ATCACACTATCACATGCATT+TGG 0.411863 8:+88496790 None:intergenic
GTAAATCTGGTAGATCAAAT+AGG 0.412334 8:-88496709 MsG0880047596.01.T01:three_prime_UTR
AGGCCTGTGTTTGGTCCTGC+TGG 0.417888 8:-88499982 MsG0880047596.01.T01:CDS
CTGAGAAAGGCTGAGAAATT+GGG 0.429522 8:-88499913 MsG0880047596.01.T01:CDS
CTGAGATTGAGTTATATTTG+AGG 0.439299 8:-88496669 MsG0880047596.01.T01:three_prime_UTR
GCCAGGTCATAGTAGAGTTT+GGG 0.439992 8:-88497092 MsG0880047596.01.T01:intron
CTCAAATATAACTCAATCTC+AGG 0.441220 8:+88496670 None:intergenic
TTGTGTATCAATCTCAAAGA+AGG 0.444043 8:-88496641 MsG0880047596.01.T01:three_prime_UTR
ATACTCCTTCATGCAGGTGG+TGG 0.445350 8:-88496914 MsG0880047596.01.T01:CDS
TGCTTTCCATGATGAAGAAT+GGG 0.446554 8:-88498791 MsG0880047596.01.T01:CDS
AACGGAATCTTGGCCTTTCG+AGG 0.448830 8:-88500446 MsG0880047596.01.T01:five_prime_UTR
AACTTCAATGCTACCTCAAA+AGG 0.451783 8:+88500485 None:intergenic
GCTTGGATCACTCCTAATAC+TGG 0.452177 8:-88499589 MsG0880047596.01.T01:intron
AGATTCATGAACTCTTCTTA+AGG 0.455774 8:-88500534 MsG0880047596.01.T01:five_prime_UTR
TACTCCTTCATGCAGGTGGT+GGG 0.461248 8:-88496913 MsG0880047596.01.T01:CDS
GGGTCACTTCATTGTGCACC+AGG 0.462816 8:-88500238 MsG0880047596.01.T01:five_prime_UTR
ACATACTTGTCGTCATGTAC+TGG 0.466966 8:+88498763 None:intergenic
TGCTTCAAAGCCACTGAGAA+AGG 0.468747 8:-88499926 MsG0880047596.01.T01:CDS
AGAGAGAGAAGGAAGAGTGT+GGG 0.470579 8:+88500625 None:intergenic
TTTACTGATCCAGTGTTAGC+AGG 0.482725 8:-88496510 MsG0880047596.01.T01:three_prime_UTR
TCAGAAGCAAGGCCTGTGTT+TGG 0.484933 8:-88499991 MsG0880047596.01.T01:CDS
CACATGTAGGAAACTGTTTG+AGG 0.486819 8:-88498659 MsG0880047596.01.T01:intron
TTGGAATCTCCTCCTCCTGA+TGG 0.488289 8:-88499634 MsG0880047596.01.T01:CDS
TATCGGAATTTGCTAAGTAT+AGG 0.490240 8:+88497030 None:intergenic
AAGAGAGAGAAGGAAGAGTG+TGG 0.491755 8:+88500624 None:intergenic
AGAAGAGGTTTCCGCGGTGT+GGG 0.494446 8:-88496949 MsG0880047596.01.T01:CDS
ACATTCATAGACCTCAATCT+AGG 0.495280 8:+88500021 None:intergenic
GAATGTGTGGCTGCAGCAGA+AGG 0.497985 8:-88496850 MsG0880047596.01.T01:CDS
TGTCTCTTGCTTAGAATGGC+TGG 0.501678 8:+88498598 None:intergenic
TTCCGTTCTGCATTGTTGAA+AGG 0.504358 8:+88500462 None:intergenic
CTGCTTTCCATGATGAAGAA+TGG 0.506293 8:-88498792 MsG0880047596.01.T01:CDS
CAATTTCTGATCAGAGAGTA+AGG 0.506313 8:+88498338 None:intergenic
AATCCAAGAAGAGGTGTGCT+TGG 0.508627 8:-88499606 MsG0880047596.01.T01:CDS
CGCGGAAACCTCTTCTCACC+AGG 0.511916 8:+88496956 None:intergenic
TGATTGATTGTGTGTATTGG+TGG 0.514796 8:-88500095 MsG0880047596.01.T01:five_prime_UTR
TTGACTCGGTCTAATAGCTA+TGG 0.521589 8:-88499712 MsG0880047596.01.T01:CDS
GAACCTGTCTTATTTCCAGC+AGG 0.522965 8:+88499967 None:intergenic
AATGTGTCTCTTGCTTAGAA+TGG 0.523823 8:+88498594 None:intergenic
GATTGATTGTGTGTATTGGT+GGG 0.528265 8:-88500094 MsG0880047596.01.T01:five_prime_UTR
ACCTCAAAAGGTTGGTGCCA+CGG 0.529567 8:+88500497 None:intergenic
GGTCCTGCTGGAAATAAGAC+AGG 0.532123 8:-88499970 MsG0880047596.01.T01:CDS
TGTTGTTTCTGACGGTGTGT+TGG 0.536773 8:-88499653 MsG0880047596.01.T01:CDS
GGACAAACTCAAATTATCAA+TGG 0.537441 8:+88496747 None:intergenic
AGAAAGAAAGAAAGAAAGCA+AGG 0.538207 8:+88500675 None:intergenic
ACTCAAATTATCAATGGCAA+TGG 0.539519 8:+88496753 None:intergenic
GAGAGAGAAGGAAGAGTGTG+GGG 0.544795 8:+88500626 None:intergenic
CTTCAGATTTCAGGAATGTG+TGG 0.546257 8:-88496863 MsG0880047596.01.T01:CDS
CTTCAGGAGGTCCTAGATTG+AGG 0.547316 8:-88500032 MsG0880047596.01.T01:CDS
ATTTACTGTGATTCATTCTG+AGG 0.549011 8:+88496726 None:intergenic
GAGAAGAGGTTTCCGCGGTG+TGG 0.552325 8:-88496950 MsG0880047596.01.T01:CDS
GAACTCCCCATTCTTCATCA+TGG 0.554190 8:+88498785 None:intergenic
TTTCAAAAGGGTGTGTAGTG+AGG 0.554978 8:-88500144 MsG0880047596.01.T01:five_prime_UTR
TTTCCGCGGTGTGGGTCCCA+CGG 0.558212 8:-88496941 MsG0880047596.01.T01:CDS
ATTTGCTAAGTATAGGCTTG+TGG 0.560857 8:+88497037 None:intergenic
CCAAGAAGTGTTGTTTCTGA+CGG 0.562851 8:-88499661 MsG0880047596.01.T01:CDS
TGTGTATCAATCTCAAAGAA+GGG 0.565652 8:-88496640 MsG0880047596.01.T01:three_prime_UTR
CTCTCTGATCAGAAATTGCG+TGG 0.565696 8:-88498333 MsG0880047596.01.T01:CDS
AATTTGTTAAGGCTTCCATC+CGG 0.568096 8:+88496582 None:intergenic
GATGAAAATGAAGAGAGAGA+AGG 0.570404 8:+88500614 None:intergenic
TTCTCAACGAAAATATGCTA+AGG 0.575318 8:+88500905 None:intergenic
ACTCCTTCATGCAGGTGGTG+GGG 0.578093 8:-88496912 MsG0880047596.01.T01:CDS
GGCTGCAGCAGAAGGGAAGG+AGG 0.580433 8:-88496842 MsG0880047596.01.T01:CDS
GAAATCTGAAGCAACTAATG+AGG 0.581296 8:+88496875 None:intergenic
GGAGAATTCCATCAAGAATG+AGG 0.581395 8:-88496821 MsG0880047596.01.T01:CDS
CAAATTCCGATATCCCCGAC+AGG 0.584407 8:-88497019 MsG0880047596.01.T01:CDS
AGCAAAGACCTGGTGAGAAG+AGG 0.585041 8:-88496964 MsG0880047596.01.T01:CDS
GTGCTCTATCTGAACTCACT+TGG 0.585688 8:-88498621 MsG0880047596.01.T01:CDS
TGTGGCTGCAGCAGAAGGGA+AGG 0.588302 8:-88496845 MsG0880047596.01.T01:CDS
TCAATCTTCCAGTAGAAGCT+CGG 0.588776 8:+88499731 None:intergenic
AATTTCTCAGCCTTTCTCAG+TGG 0.596074 8:+88499916 None:intergenic
TTGGATTGTGCACCATCAGG+AGG 0.596535 8:+88499622 None:intergenic
TCAATGCTACCTCAAAAGGT+TGG 0.596942 8:+88500489 None:intergenic
ATCTGAAGCAACTAATGAGG+TGG 0.598594 8:+88496878 None:intergenic
GTGTTAATGTCAGCTTCAGG+AGG 0.603358 8:-88500045 MsG0880047596.01.T01:exon
CTTCTACTGGAAGATTGACT+CGG 0.603962 8:-88499726 MsG0880047596.01.T01:CDS
GATTGTGCACCATCAGGAGG+AGG 0.608674 8:+88499625 None:intergenic
TATCTATTACCTGCTAACAC+TGG 0.609178 8:+88496501 None:intergenic
AGAGAGTAAGGAACTTGTAG+TGG 0.609547 8:+88498350 None:intergenic
TAACCCCACCACCTGCATGA+AGG 0.610546 8:+88496909 None:intergenic
GAATGCACGCCAAATATCAA+AGG 0.612654 8:-88498301 MsG0880047596.01.T01:intron
GGTCATATACTCCTTCATGC+AGG 0.616386 8:-88496920 MsG0880047596.01.T01:CDS
CATATACTCCTTCATGCAGG+TGG 0.620564 8:-88496917 MsG0880047596.01.T01:CDS
CTAATAGCTATGGTTTGACA+AGG 0.620795 8:-88499702 MsG0880047596.01.T01:CDS
TTCCTTTCAACAATGCAGAA+CGG 0.621013 8:-88500464 MsG0880047596.01.T01:five_prime_UTR
GAGAAGAAGTTGATAACACC+AGG 0.628389 8:-88498375 MsG0880047596.01.T01:CDS
AAATGCATGTGATAGTGTGA+TGG 0.629136 8:-88496788 MsG0880047596.01.T01:CDS
AATGTGTGGCTGCAGCAGAA+GGG 0.629409 8:-88496849 MsG0880047596.01.T01:CDS
TGAAGTTATTAGCAAAGACC+TGG 0.634551 8:-88496974 MsG0880047596.01.T01:CDS
GGCTGAGAAATTGGGCAAGG+AGG 0.635303 8:-88499905 MsG0880047596.01.T01:CDS
GCTATGGTTTGACAAGGAAG+CGG 0.636905 8:-88499696 MsG0880047596.01.T01:CDS
TAGCTGAAGAGAACCTCGAA+AGG 0.638602 8:+88500433 None:intergenic
ATGGTGCACAATCCAAGAAG+AGG 0.638802 8:-88499615 MsG0880047596.01.T01:CDS
TTTCCAGCAGGACCAAACAC+AGG 0.641381 8:+88499979 None:intergenic
GCGCAACACTGAAGAAACAC+TGG 0.647990 8:+88499834 None:intergenic
ATGTTGCTGACTCAGAAGCA+AGG 0.650117 8:-88500002 MsG0880047596.01.T01:CDS
TCGGCTATGAAACGAGTCTG+TGG 0.650238 8:+88499750 None:intergenic
AAAGGCTGAGAAATTGGGCA+AGG 0.650312 8:-88499908 MsG0880047596.01.T01:CDS
ATGAAGGAGTATATGACCGT+GGG 0.650909 8:+88496925 None:intergenic
GTTGTATGAAGCTTTCCGGA+TGG 0.655464 8:-88496597 MsG0880047596.01.T01:three_prime_UTR
AATGCAACAACTGCTCATGT+CGG 0.657461 8:+88499812 None:intergenic
CATGAAGGAGTATATGACCG+TGG 0.677378 8:+88496924 None:intergenic
CTGGTGAGAAGAGGTTTCCG+CGG 0.690988 8:-88496955 MsG0880047596.01.T01:CDS
ACACTGGCAGAATGTGACTG+AGG 0.705590 8:+88499850 None:intergenic
AGGAACGTGTGTTATTACCG+TGG 0.715081 8:-88500514 MsG0880047596.01.T01:five_prime_UTR
GCTTTCCATGATGAAGAATG+GGG 0.729667 8:-88498790 MsG0880047596.01.T01:CDS
TGACCGTGGGACCCACACCG+CGG 0.744972 8:+88496938 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATCTTTAGTTATATATT+GGG - Chr8:88499170-88499189 MsG0880047596.01.T01:intron 10.0%
!!! AGTTTTTTTCTAAATTTTTA+TGG - Chr8:88497162-88497181 MsG0880047596.01.T01:intron 10.0%
!!! GTTTTTTTCTAAATTTTTAT+GGG - Chr8:88497163-88497182 MsG0880047596.01.T01:intron 10.0%
!! ATTTAATGATGATTTGATTA+GGG - Chr8:88499927-88499946 MsG0880047596.01.T01:CDS 15.0%
!! CTAAATCTTTAGTTATATAT+TGG - Chr8:88499169-88499188 MsG0880047596.01.T01:intron 15.0%
!! TTGAAGAAATAAAAGAAATT+TGG + Chr8:88498811-88498830 None:intergenic 15.0%
!!! ATAACTAAAGATTTAGAATA+TGG + Chr8:88499165-88499184 None:intergenic 15.0%
!! AACACAAATCTTTCTAATTT+AGG + Chr8:88497293-88497312 None:intergenic 20.0%
!! AAGTCGAATAATTTCATAAA+AGG - Chr8:88499716-88499735 MsG0880047596.01.T01:CDS 20.0%
!! ACTAATATACCTTTGATATT+TGG + Chr8:88499064-88499083 None:intergenic 20.0%
!! AGTCGAATAATTTCATAAAA+GGG - Chr8:88499717-88499736 MsG0880047596.01.T01:CDS 20.0%
!! ATTGTGACAAATTAGAATAT+AGG + Chr8:88500059-88500078 None:intergenic 20.0%
!! CATTTAATGATGATTTGATT+AGG - Chr8:88499926-88499945 MsG0880047596.01.T01:CDS 20.0%
!! CTTATTCGCATTTATTTATA+TGG + Chr8:88498171-88498190 None:intergenic 20.0%
!! GTAAAAAAAGAAGAAGAATT+TGG - Chr8:88497231-88497250 MsG0880047596.01.T01:intron 20.0%
!! GTTAAAGAATCCAAATAATT+AGG + Chr8:88500091-88500110 None:intergenic 20.0%
!! TCTAGATAATAAAGGTAATT+GGG - Chr8:88499953-88499972 MsG0880047596.01.T01:CDS 20.0%
!! TTAAGAAATCAAGGAAATTA+GGG + Chr8:88497805-88497824 None:intergenic 20.0%
!! TTCATTTCATTTCATTATAC+AGG - Chr8:88500882-88500901 MsG0880047596.01.T01:intron 20.0%
!! TTTAAATTCATAACTCCATT+TGG - Chr8:88498127-88498146 MsG0880047596.01.T01:intron 20.0%
!!! AAAATTCAAGATCTGTTTTT+GGG - Chr8:88497094-88497113 MsG0880047596.01.T01:intron 20.0%
!!! AAGCCTTTTTTTTCAAAAAA+GGG + Chr8:88499797-88499816 None:intergenic 20.0%
!!! AAGTAAAATCTCAATTTTCA+AGG + Chr8:88498109-88498128 None:intergenic 20.0%
!!! ATAATTACCATTGATAATGA+GGG - Chr8:88499859-88499878 MsG0880047596.01.T01:CDS 20.0%
!!! ATATTTCTGTATTGATCTTT+TGG - Chr8:88499672-88499691 MsG0880047596.01.T01:CDS 20.0%
!!! ATGATTTATTTTTTTTCCGA+AGG + Chr8:88499648-88499667 None:intergenic 20.0%
!!! GATAATTAGAGTTTTCAAAA+GGG - Chr8:88497197-88497216 MsG0880047596.01.T01:intron 20.0%
!!! TAAAAATAGTCTTGTTATGT+TGG - Chr8:88498623-88498642 MsG0880047596.01.T01:CDS 20.0%
!!! TAGTTGTTGTTTTTTATCAT+TGG - Chr8:88498317-88498336 MsG0880047596.01.T01:CDS 20.0%
!!! TATAATTACCATTGATAATG+AGG - Chr8:88499858-88499877 MsG0880047596.01.T01:CDS 20.0%
!!! TGATAATTAGAGTTTTCAAA+AGG - Chr8:88497196-88497215 MsG0880047596.01.T01:intron 20.0%
!!! TGATTTATTTTTTTTCCGAA+GGG + Chr8:88499647-88499666 None:intergenic 20.0%
!!! TTTTATAGGTTTCCAATTTT+GGG - Chr8:88497030-88497049 MsG0880047596.01.T01:CDS 20.0%
! AAAAAGAAGAAGAATTTGGT+CGG - Chr8:88497235-88497254 MsG0880047596.01.T01:intron 25.0%
! AAACGAAAATGAGAAATTCT+TGG + Chr8:88496639-88496658 None:intergenic 25.0%
! AACGAAAATGAGAAATTCTT+GGG + Chr8:88496638-88496657 None:intergenic 25.0%
! AATGTCTTCTTAAGAAATCA+AGG + Chr8:88497814-88497833 None:intergenic 25.0%
! AGATATATATTGGGTGTATA+TGG - Chr8:88499259-88499278 MsG0880047596.01.T01:intron 25.0%
! AGTTATATATTGGGTGTATA+TGG - Chr8:88499179-88499198 MsG0880047596.01.T01:intron 25.0%
! ATAATATGTTGATGTCCAAA+TGG + Chr8:88498145-88498164 None:intergenic 25.0%
! ATGAATAAAGTGTAATTCTG+AGG - Chr8:88499564-88499583 MsG0880047596.01.T01:intron 25.0%
! CAAAATTGGAAACCTATAAA+AGG + Chr8:88497031-88497050 None:intergenic 25.0%
! CAAAGTCAAAGAGAAAAAAA+TGG + Chr8:88498878-88498897 None:intergenic 25.0%
! CTGATTGGATTTAAGAAAAT+GGG + Chr8:88497002-88497021 None:intergenic 25.0%
! CTTAAGAAATCAAGGAAATT+AGG + Chr8:88497806-88497825 None:intergenic 25.0%
! GAATTGTAGTGTTTAATGTT+AGG + Chr8:88500148-88500167 None:intergenic 25.0%
! GTCTAGATAATAAAGGTAAT+TGG - Chr8:88499952-88499971 MsG0880047596.01.T01:CDS 25.0%
! GTTATATATTGGGTGTATAT+GGG - Chr8:88499180-88499199 MsG0880047596.01.T01:intron 25.0%
! TGAATAAAGTGTAATTCTGA+GGG - Chr8:88499565-88499584 MsG0880047596.01.T01:intron 25.0%
! TGATTTCTTAAGAAGACATT+TGG - Chr8:88497814-88497833 MsG0880047596.01.T01:intron 25.0%
! TGTACGAAAGATTAATATCA+TGG + Chr8:88500026-88500045 None:intergenic 25.0%
! TTATCATTGGAGAGAAAATT+GGG - Chr8:88498330-88498349 MsG0880047596.01.T01:CDS 25.0%
! TTTATCATTGGAGAGAAAAT+TGG - Chr8:88498329-88498348 MsG0880047596.01.T01:CDS 25.0%
!! AAATGTAGCCAATTTTATCA+TGG - Chr8:88498830-88498849 MsG0880047596.01.T01:intron 25.0%
!! CTTTTATAGGTTTCCAATTT+TGG - Chr8:88497029-88497048 MsG0880047596.01.T01:CDS 25.0%
!! GAAAATTCAAGATCTGTTTT+TGG - Chr8:88497093-88497112 MsG0880047596.01.T01:intron 25.0%
!! GTAGTTTAATTTCATTCATC+TGG - Chr8:88497997-88498016 MsG0880047596.01.T01:intron 25.0%
!! TATGGTTCTTTTGGTATAAT+TGG - Chr8:88499277-88499296 MsG0880047596.01.T01:intron 25.0%
!!! AAATTCAAGATCTGTTTTTG+GGG - Chr8:88497095-88497114 MsG0880047596.01.T01:intron 25.0%
!!! AATTCTACACCAATTTGTTA+AGG + Chr8:88500785-88500804 None:intergenic 25.0%
!!! AATTTTGGGTTTCAAAGAAA+TGG - Chr8:88497044-88497063 MsG0880047596.01.T01:CDS 25.0%
!!! ACTTTTTGGAAGCAAAATTA+GGG + Chr8:88496976-88496995 None:intergenic 25.0%
!!! ATTTCTTTGAAACCCAAAAT+TGG + Chr8:88497045-88497064 None:intergenic 25.0%
!!! ATTTTGGGTTTCAAAGAAAT+GGG - Chr8:88497045-88497064 MsG0880047596.01.T01:CDS 25.0%
!!! CAAGCCTTTTTTTTCAAAAA+AGG + Chr8:88499798-88499817 None:intergenic 25.0%
!!! CTTCCCTTTTTTGAAAAAAA+AGG - Chr8:88499791-88499810 MsG0880047596.01.T01:CDS 25.0%
!!! GAGTGATTTTAAAACATCAT+GGG - Chr8:88497836-88497855 MsG0880047596.01.T01:intron 25.0%
!!! TATTAAGTTCTGAACTACTT+TGG - Chr8:88498476-88498495 MsG0880047596.01.T01:intron 25.0%
!!! TTCATGAATCTATTTTTTCC+TGG + Chr8:88496810-88496829 None:intergenic 25.0%
!!! TTTTTTTTCCTGTATATGTG+TGG - Chr8:88497893-88497912 MsG0880047596.01.T01:intron 25.0%
AATTATGATCTAACCCAAGA+GGG + Chr8:88499124-88499143 None:intergenic 30.0%
AATTGCTTTCACATATATGG+CGG - Chr8:88497972-88497991 MsG0880047596.01.T01:intron 30.0%
ACCCAATATATATCTACTCA+AGG + Chr8:88499254-88499273 None:intergenic 30.0%
ACTATGAACTATCCTACAAA+AGG + Chr8:88497926-88497945 None:intergenic 30.0%
ACTCAAATTATCAATGGCAA+TGG + Chr8:88500603-88500622 None:intergenic 30.0%
AGAAAGAAAGAAAGAAAGCA+AGG + Chr8:88496681-88496700 None:intergenic 30.0%
AGAAATTTCCAGTAAAGGTA+TGG + Chr8:88498434-88498453 None:intergenic 30.0%
AGAATGAATCACAGTAAATC+TGG - Chr8:88500631-88500650 MsG0880047596.01.T01:five_prime_UTR 30.0%
AGATTCATGAACTCTTCTTA+AGG - Chr8:88496819-88496838 MsG0880047596.01.T01:CDS 30.0%
ATCAACAAGTAAACTTAGTC+AGG + Chr8:88498524-88498543 None:intergenic 30.0%
ATTGATCTATATCCAGTTTG+CGG + Chr8:88498376-88498395 None:intergenic 30.0%
ATTGTAGAATATACCCTCTT+GGG - Chr8:88499108-88499127 MsG0880047596.01.T01:intron 30.0%
ATTTACTGTGATTCATTCTG+AGG + Chr8:88500630-88500649 None:intergenic 30.0%
CAAATATTCATTCGTGCAAT+GGG - Chr8:88498237-88498256 MsG0880047596.01.T01:intron 30.0%
CCCAATATATATCTACTCAA+GGG + Chr8:88499253-88499272 None:intergenic 30.0%
CCCTTGAGTAGATATATATT+GGG - Chr8:88499250-88499269 MsG0880047596.01.T01:intron 30.0%
CTCAAATATAACTCAATCTC+AGG + Chr8:88500686-88500705 None:intergenic 30.0%
CTGAATTGCTTTCACATATA+TGG - Chr8:88497969-88497988 MsG0880047596.01.T01:intron 30.0%
CTGAGATTGAGTTATATTTG+AGG - Chr8:88500684-88500703 MsG0880047596.01.T01:five_prime_UTR 30.0%
GAAAAAAATGGCTACATATG+AGG + Chr8:88498866-88498885 None:intergenic 30.0%
GAGTACTATAACAAAGATCT+CGG + Chr8:88499831-88499850 None:intergenic 30.0%
GCTGATTGGATTTAAGAAAA+TGG + Chr8:88497003-88497022 None:intergenic 30.0%
GGACAAACTCAAATTATCAA+TGG + Chr8:88500609-88500628 None:intergenic 30.0%
GGTTAGATCATAATTACTTG+TGG - Chr8:88499129-88499148 MsG0880047596.01.T01:intron 30.0%
GTAAATCTGGTAGATCAAAT+AGG - Chr8:88500644-88500663 MsG0880047596.01.T01:five_prime_UTR 30.0%
TAATGATGATTTGATTAGGG+AGG - Chr8:88499930-88499949 MsG0880047596.01.T01:CDS 30.0%
TAATTATGATCTAACCCAAG+AGG + Chr8:88499125-88499144 None:intergenic 30.0%
TATAAAAGGTTGAAGCTGAT+TGG + Chr8:88497017-88497036 None:intergenic 30.0%
TCAAATATTCATTCGTGCAA+TGG - Chr8:88498236-88498255 MsG0880047596.01.T01:intron 30.0%
TCAACAAGTAAACTTAGTCA+GGG + Chr8:88498523-88498542 None:intergenic 30.0%
TCCCTTGAGTAGATATATAT+TGG - Chr8:88499249-88499268 MsG0880047596.01.T01:intron 30.0%
TCTTCTCTCTATTCTTTCTT+TGG - Chr8:88496578-88496597 MsG0880047596.01.T01:three_prime_UTR 30.0%
TGATGTGAGACCTAATTATT+TGG - Chr8:88500078-88500097 MsG0880047596.01.T01:five_prime_UTR 30.0%
TGTAGAGAAATTTCCAGTAA+AGG + Chr8:88498439-88498458 None:intergenic 30.0%
TGTGACCAAAGAAAATTTCT+TGG - Chr8:88496602-88496621 MsG0880047596.01.T01:three_prime_UTR 30.0%
TGTGTATCAATCTCAAAGAA+GGG - Chr8:88500713-88500732 MsG0880047596.01.T01:intron 30.0%
TTAAACACATAATTATGCCC+CGG + Chr8:88497862-88497881 None:intergenic 30.0%
TTCTCAACGAAAATATGCTA+AGG + Chr8:88496451-88496470 None:intergenic 30.0%
TTGTAGGATAGTTCATAGTT+CGG - Chr8:88497927-88497946 MsG0880047596.01.T01:intron 30.0%
TTGTGTATCAATCTCAAAGA+AGG - Chr8:88500712-88500731 MsG0880047596.01.T01:intron 30.0%
! AAATTTTGCGAGAAAATGCT+GGG + Chr8:88496772-88496791 None:intergenic 30.0%
! AATCAGCTTCAACCTTTTAT+AGG - Chr8:88497016-88497035 MsG0880047596.01.T01:CDS 30.0%
! AGCTCTCTCAAGATTTTTAA+CGG - Chr8:88499364-88499383 MsG0880047596.01.T01:intron 30.0%
! ATCCTCCATTAAATTTTGCT+TGG - Chr8:88498661-88498680 MsG0880047596.01.T01:intron 30.0%
! ATGGGTTCTTTTGGTATAAT+TGG - Chr8:88499198-88499217 MsG0880047596.01.T01:intron 30.0%
! CTAGTTCTCATTCATTCATA+TGG + Chr8:88498411-88498430 None:intergenic 30.0%
! TAAGCAAGAGACACATTTTT+AGG - Chr8:88498765-88498784 MsG0880047596.01.T01:intron 30.0%
! TAATAAAGGTAATTGGGTTG+TGG - Chr8:88499959-88499978 MsG0880047596.01.T01:CDS 30.0%
! TGGGTTCTTTTGGTATAATT+GGG - Chr8:88499199-88499218 MsG0880047596.01.T01:intron 30.0%
! TTGCTAATAACTTCAGCTTT+TGG + Chr8:88500374-88500393 None:intergenic 30.0%
! TTTCATTCATCTGGTTTCAT+TGG - Chr8:88498006-88498025 MsG0880047596.01.T01:intron 30.0%
!! AATAGTCTTGTTATGTTGGT+TGG - Chr8:88498627-88498646 MsG0880047596.01.T01:CDS 30.0%
!! ATTGATAATGAGGGACTAAT+GGG - Chr8:88499868-88499887 MsG0880047596.01.T01:CDS 30.0%
!! GACTTTTTGGAAGCAAAATT+AGG + Chr8:88496977-88496996 None:intergenic 30.0%
!! TATCGGAATTTGCTAAGTAT+AGG + Chr8:88500326-88500345 None:intergenic 30.0%
!! TTAATTTGCATGACCCATAT+GGG - Chr8:88499995-88500014 MsG0880047596.01.T01:CDS 30.0%
!! TTTAACGGTGCTTATTTTCA+GGG - Chr8:88499379-88499398 MsG0880047596.01.T01:intron 30.0%
!! TTTAATTTGCATGACCCATA+TGG - Chr8:88499994-88500013 MsG0880047596.01.T01:CDS 30.0%
!! TTTTAACGGTGCTTATTTTC+AGG - Chr8:88499378-88499397 MsG0880047596.01.T01:intron 30.0%
!!! AAGAAAATGGGTTGACTTTT+TGG + Chr8:88496990-88497009 None:intergenic 30.0%
!!! GGAGTGATTTTAAAACATCA+TGG - Chr8:88497835-88497854 MsG0880047596.01.T01:intron 30.0%
!!! TTCAGCTTTTGGTGTTTTAA+CGG + Chr8:88500363-88500382 None:intergenic 30.0%
!!! TTTAATTTTGAGACAGCAAC+TGG + Chr8:88498957-88498976 None:intergenic 30.0%
!!! TTTTGGGTTTCAAAGAAATG+GGG - Chr8:88497046-88497065 MsG0880047596.01.T01:CDS 30.0%
AAATGGGGTAAAACATGCAA+TGG - Chr8:88498270-88498289 MsG0880047596.01.T01:intron 35.0%
AACTTCAATGCTACCTCAAA+AGG + Chr8:88496871-88496890 None:intergenic 35.0%
AAGAGAGAAGAGAGAGAAAA+TGG + Chr8:88496562-88496581 None:intergenic 35.0%
AATGTGTCTCTTGCTTAGAA+TGG + Chr8:88498762-88498781 None:intergenic 35.0%
AATTGTGCAGAGTGCAATTA+TGG + Chr8:88500188-88500207 None:intergenic 35.0%
ACATTCATAGACCTCAATCT+AGG + Chr8:88497335-88497354 None:intergenic 35.0%
ATCACACTATCACATGCATT+TGG + Chr8:88500566-88500585 None:intergenic 35.0%
ATGCAAATTAAATGAGGACC+AGG + Chr8:88499986-88500005 None:intergenic 35.0%
ATGGGCTTAATAACATGTCT+AGG - Chr8:88499481-88499500 MsG0880047596.01.T01:intron 35.0%
ATTGTGTCATACTCTACTCA+AGG + Chr8:88499335-88499354 None:intergenic 35.0%
CAACTATAGCCCATAATAAG+AGG + Chr8:88498303-88498322 None:intergenic 35.0%
CAATTTCTGATCAGAGAGTA+AGG + Chr8:88499018-88499037 None:intergenic 35.0%
CATTAGTCCCTCATTATCAA+TGG + Chr8:88499869-88499888 None:intergenic 35.0%
CATTAGTTGCTTCAGATTTC+AGG - Chr8:88500481-88500500 MsG0880047596.01.T01:five_prime_UTR 35.0%
CATTGTAGAATATACCCTCT+TGG - Chr8:88499107-88499126 MsG0880047596.01.T01:intron 35.0%
CTAATAGCTATGGTTTGACA+AGG - Chr8:88497651-88497670 MsG0880047596.01.T01:intron 35.0%
GAAAATGAGAAATTCTTGGG+TGG + Chr8:88496635-88496654 None:intergenic 35.0%
GAAATCAAGGAAATTAGGGA+AGG + Chr8:88497801-88497820 None:intergenic 35.0%
GAGTGCCAAGCAAAATTTAA+TGG + Chr8:88498669-88498688 None:intergenic 35.0%
GATGAAAATGAAGAGAGAGA+AGG + Chr8:88496742-88496761 None:intergenic 35.0%
GGACATGTACCTCTTATTAT+GGG - Chr8:88498291-88498310 MsG0880047596.01.T01:intron 35.0%
GGTCATTCGACAATTACATT+TGG - Chr8:88500282-88500301 MsG0880047596.01.T01:five_prime_UTR 35.0%
GTATATAGTACCACCTAGAA+CGG + Chr8:88499526-88499545 None:intergenic 35.0%
TAGGGAGGTCTAGATAATAA+AGG - Chr8:88499945-88499964 MsG0880047596.01.T01:CDS 35.0%
TATCTATTACCTGCTAACAC+TGG + Chr8:88500855-88500874 None:intergenic 35.0%
TCATGGAAAGCAGCATAATA+TGG + Chr8:88498554-88498573 None:intergenic 35.0%
TCTCATTCATTCATATGGAG+TGG + Chr8:88498406-88498425 None:intergenic 35.0%
TGAAGTTATTAGCAAAGACC+TGG - Chr8:88500379-88500398 MsG0880047596.01.T01:five_prime_UTR 35.0%
TGAGTAGAGTATGACACAAT+GGG - Chr8:88499335-88499354 MsG0880047596.01.T01:intron 35.0%
TGATTGATTGTGTGTATTGG+TGG - Chr8:88497258-88497277 MsG0880047596.01.T01:intron 35.0%
TGCCAAGCAAAATTTAATGG+AGG + Chr8:88498666-88498685 None:intergenic 35.0%
TGCTTTCCATGATGAAGAAT+GGG - Chr8:88498562-88498581 MsG0880047596.01.T01:intron 35.0%
TGGAAGCAAAATTAGGGTTT+AGG + Chr8:88496970-88496989 None:intergenic 35.0%
TGGACATGTACCTCTTATTA+TGG - Chr8:88498290-88498309 MsG0880047596.01.T01:intron 35.0%
TGGGTCATGCAAATTAAATG+AGG + Chr8:88499992-88500011 None:intergenic 35.0%
TGTGACCAAACCAAATTTCT+TGG + Chr8:88496493-88496512 None:intergenic 35.0%
TGTTAACAAAGTCCTTTGCA+GGG - Chr8:88498911-88498930 MsG0880047596.01.T01:intron 35.0%
TTCCTTTCAACAATGCAGAA+CGG - Chr8:88496889-88496908 MsG0880047596.01.T01:CDS 35.0%
TTCGACTTACTTTCCTAGTT+AGG + Chr8:88499704-88499723 None:intergenic 35.0%
TTGAGTAGAGTATGACACAA+TGG - Chr8:88499334-88499353 MsG0880047596.01.T01:intron 35.0%
TTGTGTCATACTCTACTCAA+GGG + Chr8:88499334-88499353 None:intergenic 35.0%
TTGTTAACAAAGTCCTTTGC+AGG - Chr8:88498910-88498929 MsG0880047596.01.T01:intron 35.0%
TTTGTGTTAATGTCAGCTTC+AGG - Chr8:88497305-88497324 MsG0880047596.01.T01:intron 35.0%
! AAAGTGTAATTCTGAGGGTT+TGG - Chr8:88499570-88499589 MsG0880047596.01.T01:intron 35.0%
! AAATGCATGTGATAGTGTGA+TGG - Chr8:88500565-88500584 MsG0880047596.01.T01:five_prime_UTR 35.0%
! AAGTGTAATTCTGAGGGTTT+GGG - Chr8:88499571-88499590 MsG0880047596.01.T01:intron 35.0%
! AATGGGTTTGTAGCCAAAAT+GGG - Chr8:88498254-88498273 MsG0880047596.01.T01:intron 35.0%
! AATTTTGCGAGAAAATGCTG+GGG + Chr8:88496771-88496790 None:intergenic 35.0%
! AGTTCGGTTCATGATACTTT+TGG - Chr8:88497943-88497962 MsG0880047596.01.T01:intron 35.0%
! ATATCATGGTTTGTCCCATA+TGG + Chr8:88500012-88500031 None:intergenic 35.0%
! ATTTGCTAAGTATAGGCTTG+TGG + Chr8:88500319-88500338 None:intergenic 35.0%
! CTTGTTATGTTGGTTGGAAA+AGG - Chr8:88498633-88498652 MsG0880047596.01.T01:CDS 35.0%
! GAAATCTGAAGCAACTAATG+AGG + Chr8:88500481-88500500 None:intergenic 35.0%
! GAAATTTTGCGAGAAAATGC+TGG + Chr8:88496773-88496792 None:intergenic 35.0%
! GAGGACCAAGAAATTTTCTT+TGG + Chr8:88496610-88496629 None:intergenic 35.0%
! GAGGGTATATTCTACAATGA+AGG + Chr8:88499106-88499125 None:intergenic 35.0%
! GATTGATTGTGTGTATTGGT+GGG - Chr8:88497259-88497278 MsG0880047596.01.T01:intron 35.0%
! GTTTTCGTAGTTCACTTTGA+AGG - Chr8:88497068-88497087 MsG0880047596.01.T01:CDS 35.0%
! TATCATGGTTTGTCCCATAT+GGG + Chr8:88500011-88500030 None:intergenic 35.0%
! TCGAACTTTTAACAAACACC+TGG + Chr8:88497136-88497155 None:intergenic 35.0%
! TTGCATGTTTTACCCCATTT+TGG + Chr8:88498270-88498289 None:intergenic 35.0%
! TTGGGTGTATATGGTTCTTT+TGG - Chr8:88499268-88499287 MsG0880047596.01.T01:intron 35.0%
! TTTCTCTGCTACTATTTTCC+AGG - Chr8:88496789-88496808 MsG0880047596.01.T01:CDS 35.0%
!! AATTTGTTAAGGCTTCCATC+CGG + Chr8:88500774-88500793 None:intergenic 35.0%
!! AGAAGCATCTTTCTTCTCTT+TGG + Chr8:88497483-88497502 None:intergenic 35.0%
!! CATTGATAATGAGGGACTAA+TGG - Chr8:88499867-88499886 MsG0880047596.01.T01:CDS 35.0%
!!! ATTTTAAAACATCATGGGCC+GGG - Chr8:88497841-88497860 MsG0880047596.01.T01:intron 35.0%
!!! GATTTTAAAACATCATGGGC+CGG - Chr8:88497840-88497859 MsG0880047596.01.T01:intron 35.0%
!!! TCAGCTTTTGGTGTTTTAAC+GGG + Chr8:88500362-88500381 None:intergenic 35.0%
AACAATGCAGAACGGAATCT+TGG - Chr8:88496897-88496916 MsG0880047596.01.T01:CDS 40.0%
AATGCAACAACTGCTCATGT+CGG + Chr8:88497544-88497563 None:intergenic 40.0%
AATTTCTCAGCCTTTCTCAG+TGG + Chr8:88497440-88497459 None:intergenic 40.0%
ACATACTTGTCGTCATGTAC+TGG + Chr8:88498593-88498612 None:intergenic 40.0%
ACTCTGCACAATTTGCATCA+CGG - Chr8:88500195-88500214 MsG0880047596.01.T01:five_prime_UTR 40.0%
ACTGAGAAAGGCTGAGAAAT+TGG - Chr8:88497439-88497458 MsG0880047596.01.T01:intron 40.0%
AGAACTAGCCATACCTTTAC+TGG - Chr8:88498423-88498442 MsG0880047596.01.T01:CDS 40.0%
AGAGAGTAAGGAACTTGTAG+TGG + Chr8:88499006-88499025 None:intergenic 40.0%
ATAATTGGGTATCCTTCACC+CGG - Chr8:88499213-88499232 MsG0880047596.01.T01:intron 40.0%
ATGGGTTTGTAGCCAAAATG+GGG - Chr8:88498255-88498274 MsG0880047596.01.T01:intron 40.0%
CAAACCAAATTTCTTGGTCC+TGG + Chr8:88496487-88496506 None:intergenic 40.0%
CACATGTAGGAAACTGTTTG+AGG - Chr8:88498694-88498713 MsG0880047596.01.T01:intron 40.0%
CAGGACCAAGAAATTTGGTT+TGG - Chr8:88496485-88496504 MsG0880047596.01.T01:three_prime_UTR 40.0%
CGGTGATTGATTGTGTGTAT+TGG - Chr8:88497255-88497274 MsG0880047596.01.T01:intron 40.0%
CTGAGAAAGGCTGAGAAATT+GGG - Chr8:88497440-88497459 MsG0880047596.01.T01:intron 40.0%
CTGCTTTCCATGATGAAGAA+TGG - Chr8:88498561-88498580 MsG0880047596.01.T01:intron 40.0%
CTTCAGATTTCAGGAATGTG+TGG - Chr8:88500490-88500509 MsG0880047596.01.T01:five_prime_UTR 40.0%
CTTCTACTGGAAGATTGACT+CGG - Chr8:88497627-88497646 MsG0880047596.01.T01:intron 40.0%
GAATGCACGCCAAATATCAA+AGG - Chr8:88499052-88499071 MsG0880047596.01.T01:intron 40.0%
GAGTGGAACAAACCAGTATT+AGG + Chr8:88497779-88497798 None:intergenic 40.0%
GATGAATGCTTCGTGTTCTT+CGG - Chr8:88497574-88497593 MsG0880047596.01.T01:intron 40.0%
GCTTTCCATGATGAAGAATG+GGG - Chr8:88498563-88498582 MsG0880047596.01.T01:intron 40.0%
GGAGAATTCCATCAAGAATG+AGG - Chr8:88500532-88500551 MsG0880047596.01.T01:five_prime_UTR 40.0%
GGATGGAAGCCTTAACAAAT+TGG - Chr8:88500773-88500792 MsG0880047596.01.T01:intron 40.0%
GTCTCTTCCAAATTAACCAG+AGG + Chr8:88499423-88499442 None:intergenic 40.0%
TCAATCTTCCAGTAGAAGCT+CGG + Chr8:88497625-88497644 None:intergenic 40.0%
TCAATGCTACCTCAAAAGGT+TGG + Chr8:88496867-88496886 None:intergenic 40.0%
TGAACCAGGACCAAGAAATT+TGG - Chr8:88496480-88496499 MsG0880047596.01.T01:three_prime_UTR 40.0%
TGCTGTTGTATGAAGCTTTC+CGG - Chr8:88500752-88500771 MsG0880047596.01.T01:intron 40.0%
TGGCACTCTTTATCACATGT+AGG - Chr8:88498681-88498700 MsG0880047596.01.T01:intron 40.0%
TTCCGTTCTGCATTGTTGAA+AGG + Chr8:88496894-88496913 None:intergenic 40.0%
TTGAGCATCCTCATTCTTGA+TGG + Chr8:88500543-88500562 None:intergenic 40.0%
TTTACTGATCCAGTGTTAGC+AGG - Chr8:88500843-88500862 MsG0880047596.01.T01:intron 40.0%
! AGTGTAATTCTGAGGGTTTG+GGG - Chr8:88499572-88499591 MsG0880047596.01.T01:intron 40.0%
! ATCTGAAGCAACTAATGAGG+TGG + Chr8:88500478-88500497 None:intergenic 40.0%
! CAATGGGTTTGTAGCCAAAA+TGG - Chr8:88498253-88498272 MsG0880047596.01.T01:intron 40.0%
! CGTTGCAACTAACTTTTTGC+AGG - Chr8:88500228-88500247 MsG0880047596.01.T01:five_prime_UTR 40.0%
! CTGGTTAATTTGGAAGAGAC+CGG - Chr8:88499423-88499442 MsG0880047596.01.T01:intron 40.0%
! GTAGCCAATTTTATCATGGC+TGG - Chr8:88498834-88498853 MsG0880047596.01.T01:intron 40.0%
! TGGGTGTATATGGGTTCTTT+TGG - Chr8:88499189-88499208 MsG0880047596.01.T01:intron 40.0%
! TTTCAAAAGGGTGTGTAGTG+AGG - Chr8:88497209-88497228 MsG0880047596.01.T01:intron 40.0%
!! CCAAGAAGTGTTGTTTCTGA+CGG - Chr8:88497692-88497711 MsG0880047596.01.T01:intron 40.0%
!! CTTTTGGAGAACACCTAACT+AGG - Chr8:88499688-88499707 MsG0880047596.01.T01:CDS 40.0%
!! GAGAAGAAGTTGATAACACC+AGG - Chr8:88498978-88498997 MsG0880047596.01.T01:intron 40.0%
!! TTGACTCGGTCTAATAGCTA+TGG - Chr8:88497641-88497660 MsG0880047596.01.T01:intron 40.0%
!!! TTTTAAAACATCATGGGCCG+GGG - Chr8:88497842-88497861 MsG0880047596.01.T01:intron 40.0%
AAAGGCTGAGAAATTGGGCA+AGG - Chr8:88497445-88497464 MsG0880047596.01.T01:intron 45.0%
AAGAGAGAGAAGGAAGAGTG+TGG + Chr8:88496732-88496751 None:intergenic 45.0%
AAGGAACTTGTAGTGGTTCC+TGG + Chr8:88498999-88499018 None:intergenic 45.0%
AAGGGATTTCTCTGCAGTTC+CGG + Chr8:88499235-88499254 None:intergenic 45.0%
ACCCAAACTCTACTATGACC+TGG + Chr8:88500265-88500284 None:intergenic 45.0%
ATGGTGCACAATCCAAGAAG+AGG - Chr8:88497738-88497757 MsG0880047596.01.T01:intron 45.0%
CAAACTGGCAACACATCAAG+CGG + Chr8:88499616-88499635 None:intergenic 45.0%
CAAGGAAATTAGGGAAGGAG+TGG + Chr8:88497796-88497815 None:intergenic 45.0%
CACATACCAGCTAAGCATGT+TGG + Chr8:88500117-88500136 None:intergenic 45.0%
CAGCAAAAACTTCCCTGCAA+AGG + Chr8:88498926-88498945 None:intergenic 45.0%
CATCTCATCCAAACGCTCTT+GGG - Chr8:88499449-88499468 MsG0880047596.01.T01:intron 45.0%
CCAAATTAACCAGAGGCCAT+GGG + Chr8:88499416-88499435 None:intergenic 45.0%
CCGTCAGAAACAACACTTCT+TGG + Chr8:88497695-88497714 None:intergenic 45.0%
CGAGAAAATGCTGGGGAAAA+AGG + Chr8:88496764-88496783 None:intergenic 45.0%
CTCTCTGATCAGAAATTGCG+TGG - Chr8:88499020-88499039 MsG0880047596.01.T01:intron 45.0%
CTTGATGTGTTGCCAGTTTG+GGG - Chr8:88499616-88499635 MsG0880047596.01.T01:CDS 45.0%
GAACTCCCCATTCTTCATCA+TGG + Chr8:88498571-88498590 None:intergenic 45.0%
GAGAAACTCTTGTGTGAACC+AGG - Chr8:88496466-88496485 MsG0880047596.01.T01:three_prime_UTR 45.0%
GAGAAATTCTTGGGTGGTTG+AGG + Chr8:88496629-88496648 None:intergenic 45.0%
GCAGCCAGCCATGATAAAAT+TGG + Chr8:88498841-88498860 None:intergenic 45.0%
GCCAGGTCATAGTAGAGTTT+GGG - Chr8:88500261-88500280 MsG0880047596.01.T01:five_prime_UTR 45.0%
GCGTTTGGATGAGATGATTC+CGG + Chr8:88499445-88499464 None:intergenic 45.0%
GCTATGGTTTGACAAGGAAG+CGG - Chr8:88497657-88497676 MsG0880047596.01.T01:intron 45.0%
GCTTGATGTGTTGCCAGTTT+GGG - Chr8:88499615-88499634 MsG0880047596.01.T01:CDS 45.0%
GCTTGGATCACTCCTAATAC+TGG - Chr8:88497764-88497783 MsG0880047596.01.T01:intron 45.0%
GGATTACTCTCTGCAGTTGT+GGG + Chr8:88499313-88499332 None:intergenic 45.0%
GTGATGTTACTAGCCGTTCT+AGG - Chr8:88499510-88499529 MsG0880047596.01.T01:intron 45.0%
GTGCTCTATCTGAACTCACT+TGG - Chr8:88498732-88498751 MsG0880047596.01.T01:intron 45.0%
GTGTTAATGTCAGCTTCAGG+AGG - Chr8:88497308-88497327 MsG0880047596.01.T01:intron 45.0%
GTTGTATGAAGCTTTCCGGA+TGG - Chr8:88500756-88500775 MsG0880047596.01.T01:intron 45.0%
TAGCTGAAGAGAACCTCGAA+AGG + Chr8:88496923-88496942 None:intergenic 45.0%
TCATCTCATCCAAACGCTCT+TGG - Chr8:88499448-88499467 MsG0880047596.01.T01:intron 45.0%
TCCAAATTAACCAGAGGCCA+TGG + Chr8:88499417-88499436 None:intergenic 45.0%
TGCCAGGTCATAGTAGAGTT+TGG - Chr8:88500260-88500279 MsG0880047596.01.T01:five_prime_UTR 45.0%
TGCTTCAAAGCCACTGAGAA+AGG - Chr8:88497427-88497446 MsG0880047596.01.T01:intron 45.0%
TGTCTCTTGCTTAGAATGGC+TGG + Chr8:88498758-88498777 None:intergenic 45.0%
TTCTTGGATTGTGCACCATC+AGG + Chr8:88497737-88497756 None:intergenic 45.0%
TTGATGTGTTGCCAGTTTGG+GGG - Chr8:88499617-88499636 MsG0880047596.01.T01:CDS 45.0%
TTTCATAGCCGAGCTTCTAC+TGG - Chr8:88497614-88497633 MsG0880047596.01.T01:intron 45.0%
! AAGAAGTACATGCCGCAAAC+TGG - Chr8:88498361-88498380 MsG0880047596.01.T01:CDS 45.0%
! AATCCAAGAAGAGGTGTGCT+TGG - Chr8:88497747-88497766 MsG0880047596.01.T01:intron 45.0%
! AGAGAGAGAAGGAAGAGTGT+GGG + Chr8:88496731-88496750 None:intergenic 45.0%
! AGGAACGTGTGTTATTACCG+TGG - Chr8:88496839-88496858 MsG0880047596.01.T01:CDS 45.0%
! ATGTTACTAGCCGTTCTAGG+TGG - Chr8:88499513-88499532 MsG0880047596.01.T01:intron 45.0%
! ATTGGGCAAGGAGGTTGATT+TGG - Chr8:88497457-88497476 MsG0880047596.01.T01:intron 45.0%
! TTGCAGGTTTTACTGATGCC+AGG - Chr8:88500244-88500263 MsG0880047596.01.T01:five_prime_UTR 45.0%
!! ACGGTGCTTATTTTCAGGGT+TGG - Chr8:88499383-88499402 MsG0880047596.01.T01:intron 45.0%
!! ATGTTGCTGACTCAGAAGCA+AGG - Chr8:88497351-88497370 MsG0880047596.01.T01:intron 45.0%
!! GAACCTGTCTTATTTCCAGC+AGG + Chr8:88497389-88497408 None:intergenic 45.0%
!! GCTCTTGGGTTGGTGTATAT+GGG - Chr8:88499463-88499482 MsG0880047596.01.T01:intron 45.0%
!! TGTTGTTTCTGACGGTGTGT+TGG - Chr8:88497700-88497719 MsG0880047596.01.T01:intron 45.0%
!!! GTGTTTTAACGGGAACCTGT+CGG + Chr8:88500352-88500371 None:intergenic 45.0%
!!! TGTTTTAACGGGAACCTGTC+GGG + Chr8:88500351-88500370 None:intergenic 45.0%
AACCAGCCAACATGCTTAGC+TGG - Chr8:88500108-88500127 MsG0880047596.01.T01:five_prime_UTR 50.0%
AATGTGTGGCTGCAGCAGAA+GGG - Chr8:88500504-88500523 MsG0880047596.01.T01:five_prime_UTR 50.0%
ACACTGGCAGAATGTGACTG+AGG + Chr8:88497506-88497525 None:intergenic 50.0%
AGCAAAGACCTGGTGAGAAG+AGG - Chr8:88500389-88500408 MsG0880047596.01.T01:five_prime_UTR 50.0%
AGGGATTTCTCTGCAGTTCC+GGG + Chr8:88499234-88499253 None:intergenic 50.0%
CAAATTCCGATATCCCCGAC+AGG - Chr8:88500334-88500353 MsG0880047596.01.T01:five_prime_UTR 50.0%
CAGGGTTGGATTTGAACCCA+TGG - Chr8:88499397-88499416 MsG0880047596.01.T01:intron 50.0%
CCCATGGCCTCTGGTTAATT+TGG - Chr8:88499413-88499432 MsG0880047596.01.T01:intron 50.0%
CGCTTGATGTGTTGCCAGTT+TGG - Chr8:88499614-88499633 MsG0880047596.01.T01:CDS 50.0%
CTTCAGGAGGTCCTAGATTG+AGG - Chr8:88497321-88497340 MsG0880047596.01.T01:intron 50.0%
GATCCAAGCACACCTCTTCT+TGG + Chr8:88497753-88497772 None:intergenic 50.0%
GCACACAGCCACACATATAC+AGG + Chr8:88497904-88497923 None:intergenic 50.0%
GCGCAACACTGAAGAAACAC+TGG + Chr8:88497522-88497541 None:intergenic 50.0%
GGGATTACTCTCTGCAGTTG+TGG + Chr8:88499314-88499333 None:intergenic 50.0%
GGTCCTGCTGGAAATAAGAC+AGG - Chr8:88497383-88497402 MsG0880047596.01.T01:intron 50.0%
TACCAGCTAAGCATGTTGGC+TGG + Chr8:88500113-88500132 None:intergenic 50.0%
TCAGAAGCAAGGCCTGTGTT+TGG - Chr8:88497362-88497381 MsG0880047596.01.T01:intron 50.0%
TCATCCAAACGCTCTTGGGT+TGG - Chr8:88499453-88499472 MsG0880047596.01.T01:intron 50.0%
TCGGCTATGAAACGAGTCTG+TGG + Chr8:88497606-88497625 None:intergenic 50.0%
TTGGAATCTCCTCCTCCTGA+TGG - Chr8:88497719-88497738 MsG0880047596.01.T01:intron 50.0%
TTGGATTGTGCACCATCAGG+AGG + Chr8:88497734-88497753 None:intergenic 50.0%
TTTCCAGCAGGACCAAACAC+AGG + Chr8:88497377-88497396 None:intergenic 50.0%
! AACGGAATCTTGGCCTTTCG+AGG - Chr8:88496907-88496926 MsG0880047596.01.T01:CDS 50.0%
! AGGTAATTGGGTTGTGGTCC+TGG - Chr8:88499965-88499984 MsG0880047596.01.T01:CDS 50.0%
! CAGTTTGGGGGTTTTCCCTT+CGG - Chr8:88499629-88499648 MsG0880047596.01.T01:CDS 50.0%
! GAGAGAGAAGGAAGAGTGTG+GGG + Chr8:88496730-88496749 None:intergenic 50.0%
! TGTGGCTGTGTGCCTTTTGT+AGG - Chr8:88497911-88497930 MsG0880047596.01.T01:intron 50.0%
!! ACCTCAAAAGGTTGGTGCCA+CGG + Chr8:88496859-88496878 None:intergenic 50.0%
!! CGCTCTTGGGTTGGTGTATA+TGG - Chr8:88499462-88499481 MsG0880047596.01.T01:intron 50.0%
!! GTTTTAACGGGAACCTGTCG+GGG + Chr8:88500350-88500369 None:intergenic 50.0%
!! TACACCAACCCAAGAGCGTT+TGG + Chr8:88499460-88499479 None:intergenic 50.0%
AGAAGAGGTTTCCGCGGTGT+GGG - Chr8:88500404-88500423 MsG0880047596.01.T01:five_prime_UTR 55.0%
CGAAGGGAAAACCCCCAAAC+TGG + Chr8:88499631-88499650 None:intergenic 55.0%
CTGGTGAGAAGAGGTTTCCG+CGG - Chr8:88500398-88500417 MsG0880047596.01.T01:five_prime_UTR 55.0%
GAATGTGTGGCTGCAGCAGA+AGG - Chr8:88500503-88500522 MsG0880047596.01.T01:five_prime_UTR 55.0%
GATTGTGCACCATCAGGAGG+AGG + Chr8:88497731-88497750 None:intergenic 55.0%
GGATTTGAACCCATGGCCTC+TGG - Chr8:88499404-88499423 MsG0880047596.01.T01:intron 55.0%
GGCTGAGAAATTGGGCAAGG+AGG - Chr8:88497448-88497467 MsG0880047596.01.T01:intron 55.0%
GGGTCACTTCATTGTGCACC+AGG - Chr8:88497115-88497134 MsG0880047596.01.T01:intron 55.0%
TCTCTGCAGTTGTGGGCGAA+GGG + Chr8:88499306-88499325 None:intergenic 55.0%
TTCTCTGCAGTTCCGGGTGA+AGG + Chr8:88499228-88499247 None:intergenic 55.0%
! ACCGTGGCACCAACCTTTTG+AGG - Chr8:88496855-88496874 MsG0880047596.01.T01:CDS 55.0%
AGGCCTGTGTTTGGTCCTGC+TGG - Chr8:88497371-88497390 MsG0880047596.01.T01:intron 60.0%
CGCGGAAACCTCTTCTCACC+AGG + Chr8:88500400-88500419 None:intergenic 60.0%
CGGGAACCTGTCGGGGATAT+CGG + Chr8:88500343-88500362 None:intergenic 60.0%
CTCTCTGCAGTTGTGGGCGA+AGG + Chr8:88499307-88499326 None:intergenic 60.0%
GAGAAGAGGTTTCCGCGGTG+TGG - Chr8:88500403-88500422 MsG0880047596.01.T01:five_prime_UTR 60.0%
TGTGGCTGCAGCAGAAGGGA+AGG - Chr8:88500508-88500527 MsG0880047596.01.T01:five_prime_UTR 60.0%
GGCTGCAGCAGAAGGGAAGG+AGG - Chr8:88500511-88500530 MsG0880047596.01.T01:five_prime_UTR 65.0%
TTTCCGCGGTGTGGGTCCCA+CGG - Chr8:88500412-88500431 MsG0880047596.01.T01:five_prime_UTR 65.0%
TGACCGTGGGACCCACACCG+CGG + Chr8:88500418-88500437 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 88496445 88500930 88496445 ID=MsG0880047596.01;Name=MsG0880047596.01
Chr8 mRNA 88496445 88500930 88496445 ID=MsG0880047596.01.T01;Parent=MsG0880047596.01;Name=MsG0880047596.01.T01;_AED=0.27;_eAED=0.27;_QI=677|1|1|1|0.8|0.66|6|293|375
Chr8 exon 88496445 88497109 88496445 ID=MsG0880047596.01.T01:exon:2321;Parent=MsG0880047596.01.T01
Chr8 exon 88498302 88498443 88498302 ID=MsG0880047596.01.T01:exon:2320;Parent=MsG0880047596.01.T01
Chr8 exon 88498589 88498672 88498589 ID=MsG0880047596.01.T01:exon:2319;Parent=MsG0880047596.01.T01
Chr8 exon 88498769 88498826 88498769 ID=MsG0880047596.01.T01:exon:2318;Parent=MsG0880047596.01.T01
Chr8 exon 88499590 88500719 88499590 ID=MsG0880047596.01.T01:exon:2317;Parent=MsG0880047596.01.T01
Chr8 exon 88500912 88500930 88500912 ID=MsG0880047596.01.T01:exon:2316;Parent=MsG0880047596.01.T01
Chr8 five_prime_UTR 88500912 88500930 88500912 ID=MsG0880047596.01.T01:five_prime_utr;Parent=MsG0880047596.01.T01
Chr8 five_prime_UTR 88500062 88500719 88500062 ID=MsG0880047596.01.T01:five_prime_utr;Parent=MsG0880047596.01.T01
Chr8 CDS 88499590 88500061 88499590 ID=MsG0880047596.01.T01:cds;Parent=MsG0880047596.01.T01
Chr8 CDS 88498769 88498826 88498769 ID=MsG0880047596.01.T01:cds;Parent=MsG0880047596.01.T01
Chr8 CDS 88498589 88498672 88498589 ID=MsG0880047596.01.T01:cds;Parent=MsG0880047596.01.T01
Chr8 CDS 88498302 88498443 88498302 ID=MsG0880047596.01.T01:cds;Parent=MsG0880047596.01.T01
Chr8 CDS 88496738 88497109 88496738 ID=MsG0880047596.01.T01:cds;Parent=MsG0880047596.01.T01
Chr8 three_prime_UTR 88496445 88496737 88496445 ID=MsG0880047596.01.T01:three_prime_utr;Parent=MsG0880047596.01.T01
Gene Sequence

>MsG0880047596.01.T01

ATGTCAGCTTCAGGAGGTCCTAGATTGAGGTCTATGAATGTTGCTGACTCAGAAGCAAGGCCTGTGTTTGGTCCTGCTGGAAATAAGACAGGTTCTTATAGTTCTAGAAAAGATGCTTCAAAGCCACTGAGAAAGGCTGAGAAATTGGGCAAGGAGGTTGATTTGGCCAAAGAGAAGAAAGATGCTTCTCCTCAGTCACATTCTGCCAGTGTTTCTTCAGTGTTGCGCCGACATGAGCAGTTGTTGCATTCTAATTTGTCGATGAATGCTTCGTGTTCTTCGGATGCATCCACAGACTCGTTTCATAGCCGAGCTTCTACTGGAAGATTGACTCGGTCTAATAGCTATGGTTTGACAAGGAAGCGGTCAGTGTCGAAGCCAAGAAGTGTTGTTTCTGACGGTGTGTTGGAATCTCCTCCTCCTGATGGTGCACAATCCAAGAAGAGGTGTGCTTGGATCACTCCTAATACTGAGCCATATTATGCTGCTTTCCATGATGAAGAATGGGGAGTTCCAGTACATGACGACAAGAAACTGTTTGAGGTTCTTGTTCTTTCGAGTGCTCTATCTGAACTCACTTGGCCAGCCATTCTAAGCAAGAGACACATTTTTAGGGAAGTTTTTGCTGACTTTGATCCAGTTGCTGTCTCAAAATTAAATGAGAAGAAGTTGATAACACCAGGAACCACTACAAGTTCCTTACTCTCTGATCAGAAATTGCGTGGAATAATTGAGAATGCACGCCAAATATCAAAGGTCATAGTAGAGTTTGGGTCATTCGACAATTACATTTGGAGTTTTGTGAACCACAAGCCTATACTTAGCAAATTCCGATATCCCCGACAGGTTCCCGTTAAAACACCAAAAGCTGAAGTTATTAGCAAAGACCTGGTGAGAAGAGGTTTCCGCGGTGTGGGTCCCACGGTCATATACTCCTTCATGCAGGTGGTGGGGTTAACTAATGACCACCTCATTAGTTGCTTCAGATTTCAGGAATGTGTGGCTGCAGCAGAAGGGAAGGAGGAGAATTCCATCAAGAATGAGGATGCTCAACCAAATGCATGTGATAGTGTGATGGAATCTGATCTTTCCATTGCCATTGATAATTTGAGTTTGTCCTCAGAATGA
Protein sequence

>MsG0880047596.01.T01

MSASGGPRLRSMNVADSEARPVFGPAGNKTGSYSSRKDASKPLRKAEKLGKEVDLAKEKKDASPQSHSASVSSVLRRHEQLLHSNLSMNASCSSDASTDSFHSRASTGRLTRSNSYGLTRKRSVSKPRSVVSDGVLESPPPDGAQSKKRCAWITPNTEPYYAAFHDEEWGVPVHDDKKLFEVLVLSSALSELTWPAILSKRHIFREVFADFDPVAVSKLNEKKLITPGTTTSSLLSDQKLRGIIENARQISKVIVEFGSFDNYIWSFVNHKPILSKFRYPRQVPVKTPKAEVISKDLVRRGFRGVGPTVIYSFMQVVGLTNDHLISCFRFQECVAAAEGKEENSIKNEDAQPNACDSVMESDLSIAIDNLSLSSE*