AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480020196.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020196.01.T01 MTR_0251s0050 77.966 236 45 1 9 244 44 272 2.55e-121 346
MsG0480020196.01.T01 MTR_0008s0390 70.042 237 62 5 9 244 44 272 1.76e-107 311
MsG0480020196.01.T01 MTR_0008s0470 64.706 255 62 5 10 244 45 291 1.89e-104 304
MsG0480020196.01.T01 MTR_2g089420 48.795 166 77 4 5 166 39 200 3.44e-44 154
MsG0480020196.01.T01 MTR_1g043080 41.791 201 93 7 10 200 44 230 1.24e-40 140
MsG0480020196.01.T01 MTR_2g089450 37.131 237 116 8 9 244 43 247 2.56e-40 139
MsG0480020196.01.T01 MTR_1g076150 46.296 162 77 4 9 170 43 194 3.01e-39 137
MsG0480020196.01.T01 MTR_7g115650 58.333 96 40 0 10 105 44 139 4.59e-38 132
MsG0480020196.01.T01 MTR_7g096930 39.241 237 123 6 10 243 44 262 5.01e-38 134
MsG0480020196.01.T01 MTR_1g043050 39.806 206 108 7 10 209 44 239 1.05e-37 132
MsG0480020196.01.T01 MTR_4g100720 72.727 77 21 0 10 86 45 121 9.37e-37 128
MsG0480020196.01.T01 MTR_1g085040 49.123 114 58 0 9 122 43 156 1.03e-36 133
MsG0480020196.01.T01 MTR_0008s0280 70.833 72 21 0 9 80 43 114 4.69e-36 127
MsG0480020196.01.T01 MTR_8g027345 70.886 79 23 0 10 88 44 122 5.03e-36 129
MsG0480020196.01.T01 MTR_1g112760 67.568 74 24 0 9 82 44 117 1.72e-35 126
MsG0480020196.01.T01 MTR_1g100653 73.973 73 19 0 10 82 44 116 1.76e-35 128
MsG0480020196.01.T01 MTR_3g077110 68.919 74 23 0 9 82 43 116 2.04e-35 129
MsG0480020196.01.T01 MTR_4g125520 62.222 90 34 0 10 99 44 133 3.05e-35 127
MsG0480020196.01.T01 MTR_7g117730 70.130 77 23 0 10 86 44 120 3.66e-35 126
MsG0480020196.01.T01 MTR_0197s0010 57.292 96 39 1 6 99 27 122 6.51e-35 125
MsG0480020196.01.T01 MTR_7g076740 70.270 74 22 0 9 82 44 117 8.32e-35 126
MsG0480020196.01.T01 MTR_4g073420 40.506 158 84 2 10 158 44 200 8.64e-35 126
MsG0480020196.01.T01 MTR_4g105130 46.154 156 66 4 10 165 44 181 8.70e-35 127
MsG0480020196.01.T01 MTR_7g110830 50.000 112 56 0 10 121 44 155 1.03e-34 127
MsG0480020196.01.T01 MTR_1g085640 55.208 96 43 0 10 105 44 139 2.41e-34 127
MsG0480020196.01.T01 MTR_2g097910 69.333 75 23 0 10 84 52 126 2.54e-34 125
MsG0480020196.01.T01 MTR_0063s0090 56.122 98 42 1 9 105 43 140 2.70e-34 123
MsG0480020196.01.T01 MTR_3g028740 72.603 73 20 0 10 82 54 126 4.06e-34 125
MsG0480020196.01.T01 MTR_8g031360 70.270 74 22 0 9 82 45 118 5.68e-34 124
MsG0480020196.01.T01 MTR_6g055910 59.140 93 28 1 8 100 15 97 6.94e-34 122
MsG0480020196.01.T01 MTR_3g097450 69.863 73 22 0 10 82 44 116 8.66e-34 124
MsG0480020196.01.T01 MTR_4g478180 53.333 105 34 2 9 98 44 148 9.36e-34 125
MsG0480020196.01.T01 MTR_1g017000 49.153 118 54 2 10 127 45 156 1.05e-33 122
MsG0480020196.01.T01 MTR_4g065017 69.863 73 22 0 10 82 49 121 1.27e-33 124
MsG0480020196.01.T01 MTR_4g082290 72.603 73 20 0 10 82 44 116 1.95e-33 125
MsG0480020196.01.T01 MTR_8g095390 67.123 73 24 0 10 82 44 116 2.09e-33 123
MsG0480020196.01.T01 MTR_4g082230 72.603 73 20 0 10 82 44 116 2.16e-33 125
MsG0480020196.01.T01 MTR_3g074520 66.216 74 25 0 9 82 43 116 2.92e-33 123
MsG0480020196.01.T01 MTR_2g089620 52.101 119 50 2 10 128 44 155 3.14e-33 123
MsG0480020196.01.T01 MTR_1g100667 69.863 73 22 0 10 82 45 117 4.19e-33 121
MsG0480020196.01.T01 MTR_7g011170 72.603 73 20 0 10 82 44 116 4.72e-33 122
MsG0480020196.01.T01 MTR_5g029840 53.097 113 44 1 10 122 44 147 5.45e-33 122
MsG0480020196.01.T01 MTR_4g091490 69.863 73 22 0 10 82 45 117 6.22e-33 122
MsG0480020196.01.T01 MTR_8g017500 61.250 80 31 0 9 88 43 122 8.51e-33 122
MsG0480020196.01.T01 MTR_5g079670 67.123 73 24 0 10 82 43 115 8.90e-33 119
MsG0480020196.01.T01 MTR_7g010210 61.905 84 32 0 10 93 44 127 9.96e-33 120
MsG0480020196.01.T01 MTR_7g010210 62.651 83 31 0 10 92 44 126 1.31e-32 121
MsG0480020196.01.T01 MTR_8g017440 53.535 99 39 1 9 100 43 141 1.64e-32 121
MsG0480020196.01.T01 MTR_6g055910 59.341 91 27 1 10 100 46 126 1.69e-32 120
MsG0480020196.01.T01 MTR_2g011660 68.493 73 23 0 10 82 45 117 1.76e-32 121
MsG0480020196.01.T01 MTR_2g099740 66.216 74 25 0 9 82 43 116 2.51e-32 122
MsG0480020196.01.T01 MTR_4g063100 60.494 81 32 0 1 81 1 81 2.65e-32 118
MsG0480020196.01.T01 MTR_3g083540 67.123 73 24 0 10 82 73 145 2.95e-32 120
MsG0480020196.01.T01 MTR_5g007370 64.865 74 26 0 9 82 43 116 3.22e-32 119
MsG0480020196.01.T01 MTR_8g017390 64.865 74 26 0 9 82 44 117 3.74e-32 122
MsG0480020196.01.T01 MTR_2g064160 65.753 73 25 0 10 82 43 115 4.45e-32 119
MsG0480020196.01.T01 MTR_8g017540 63.514 74 27 0 9 82 89 162 5.11e-32 121
MsG0480020196.01.T01 MTR_7g035075 58.140 86 36 0 10 95 46 131 5.12e-32 116
MsG0480020196.01.T01 MTR_4g102380 64.865 74 26 0 9 82 43 116 5.53e-32 118
MsG0480020196.01.T01 MTR_4g121460 65.753 73 25 0 10 82 44 116 6.35e-32 119
MsG0480020196.01.T01 MTR_6g012690 69.863 73 22 0 10 82 44 116 6.50e-32 120
MsG0480020196.01.T01 MTR_4g485530 67.123 73 24 0 10 82 44 116 1.03e-31 115
MsG0480020196.01.T01 MTR_8g020490 65.753 73 25 0 10 82 40 112 1.18e-31 117
MsG0480020196.01.T01 MTR_3g011610 55.914 93 41 0 10 102 69 161 1.21e-31 121
MsG0480020196.01.T01 MTR_1g110460 56.989 93 37 1 10 102 58 147 1.49e-31 118
MsG0480020196.01.T01 MTR_8g042410 66.667 72 24 0 10 81 69 140 1.53e-31 121
MsG0480020196.01.T01 MTR_8g098860 65.753 73 25 0 10 82 44 116 1.55e-31 118
MsG0480020196.01.T01 MTR_7g017260 54.455 101 42 1 6 106 55 151 2.36e-31 117
MsG0480020196.01.T01 MTR_4g063100 65.753 73 25 0 9 81 38 110 3.02e-31 115
MsG0480020196.01.T01 MTR_2g067420 71.642 67 19 0 10 76 46 112 4.06e-31 117
MsG0480020196.01.T01 MTR_3g065440 37.725 167 91 3 9 165 43 206 4.73e-31 117
MsG0480020196.01.T01 MTR_8g060940 72.464 69 19 0 10 78 39 107 5.67e-31 115
MsG0480020196.01.T01 MTR_2g034790 60.759 79 28 1 7 82 38 116 6.17e-31 117
MsG0480020196.01.T01 MTR_1g062940 41.497 147 80 3 9 152 37 180 7.09e-31 114
MsG0480020196.01.T01 MTR_7g111290 71.642 67 19 0 9 75 1 67 7.21e-31 117
MsG0480020196.01.T01 MTR_1g086530 64.865 74 26 0 9 82 64 137 7.61e-31 115
MsG0480020196.01.T01 MTR_6g090405 65.278 72 25 0 10 81 45 116 1.10e-30 114
MsG0480020196.01.T01 MTR_6g006030 56.977 86 34 1 10 92 46 131 1.17e-30 113
MsG0480020196.01.T01 MTR_8g017340 63.514 74 27 0 9 82 44 117 1.19e-30 119
MsG0480020196.01.T01 MTR_5g078140 62.162 74 28 0 9 82 43 116 1.28e-30 115
MsG0480020196.01.T01 MTR_4g057635 61.250 80 29 1 3 82 40 117 1.31e-30 115
MsG0480020196.01.T01 MTR_3g052430 62.500 72 27 0 10 81 73 144 1.45e-30 119
MsG0480020196.01.T01 MTR_3g461490 64.384 73 26 0 10 82 44 116 1.51e-30 115
MsG0480020196.01.T01 MTR_1g073170 56.818 88 37 1 9 96 51 137 1.52e-30 114
MsG0480020196.01.T01 MTR_2g096380 54.023 87 40 0 8 94 17 103 1.64e-30 113
MsG0480020196.01.T01 MTR_5g078910 67.123 73 24 0 10 82 39 111 1.74e-30 115
MsG0480020196.01.T01 MTR_5g014990 41.353 133 68 2 11 143 46 168 1.89e-30 115
MsG0480020196.01.T01 MTR_5g079290 65.753 73 25 0 10 82 49 121 2.26e-30 114
MsG0480020196.01.T01 MTR_3g052450 61.972 71 27 0 11 81 73 143 3.44e-30 117
MsG0480020196.01.T01 MTR_3g103570 63.889 72 26 0 11 82 46 117 3.89e-30 115
MsG0480020196.01.T01 MTR_1g045610 56.818 88 37 1 9 96 52 138 4.33e-30 113
MsG0480020196.01.T01 MTR_8g017350 62.162 74 28 0 9 82 44 117 4.45e-30 118
MsG0480020196.01.T01 MTR_2g096380 54.651 86 39 0 9 94 37 122 5.05e-30 112
MsG0480020196.01.T01 MTR_5g010020 68.657 67 21 0 10 76 44 110 5.09e-30 114
MsG0480020196.01.T01 MTR_5g078950 70.000 70 21 0 10 79 39 108 5.15e-30 113
MsG0480020196.01.T01 MTR_7g111290 70.149 67 20 0 9 75 43 109 6.52e-30 115
MsG0480020196.01.T01 MTR_7g087130 64.865 74 26 0 10 83 44 117 1.05e-29 114
MsG0480020196.01.T01 MTR_1g017140 62.500 72 27 0 11 82 46 117 1.33e-29 113
MsG0480020196.01.T01 MTR_0140s0030 59.740 77 31 0 10 86 45 121 1.90e-29 113
MsG0480020196.01.T01 MTR_0489s0020 59.740 77 31 0 10 86 45 121 1.90e-29 113
MsG0480020196.01.T01 MTR_5g079220 64.384 73 26 0 10 82 53 125 2.42e-29 111
MsG0480020196.01.T01 MTR_6g009430 64.384 73 26 0 10 82 44 116 2.45e-29 112
MsG0480020196.01.T01 MTR_5g078800 65.753 73 25 0 10 82 39 111 3.58e-29 110
MsG0480020196.01.T01 MTR_1g021230 49.000 100 51 0 7 106 86 185 4.01e-29 114
MsG0480020196.01.T01 MTR_6g012180 70.149 67 20 0 10 76 44 110 4.61e-29 111
MsG0480020196.01.T01 MTR_1g086510 51.000 100 40 1 10 109 53 143 5.39e-29 110
MsG0480020196.01.T01 MTR_0001s0360 67.606 71 23 0 12 82 41 111 5.47e-29 110
MsG0480020196.01.T01 MTR_5g078860 64.384 73 26 0 10 82 39 111 6.04e-29 111
MsG0480020196.01.T01 MTR_3g039990 57.647 85 29 1 10 87 45 129 7.43e-29 111
MsG0480020196.01.T01 MTR_7g102110 62.500 72 27 0 11 82 46 117 9.12e-29 110
MsG0480020196.01.T01 MTR_5g079120 55.682 88 39 0 10 97 93 180 4.16e-28 108
MsG0480020196.01.T01 MTR_5g042030 63.380 71 26 0 12 82 41 111 4.55e-28 108
MsG0480020196.01.T01 MTR_4g128670 66.667 66 22 0 11 76 46 111 6.27e-28 109
MsG0480020196.01.T01 MTR_2g095520 64.179 67 24 0 10 76 45 111 9.71e-28 108
MsG0480020196.01.T01 MTR_4g097570 60.563 71 28 0 5 75 41 111 1.59e-27 107
MsG0480020196.01.T01 MTR_0193s0090 43.056 144 70 4 10 150 39 173 1.71e-27 105
MsG0480020196.01.T01 MTR_0247s0040 64.286 70 25 0 10 79 39 108 4.05e-27 103
MsG0480020196.01.T01 MTR_4g097570 63.077 65 24 0 11 75 46 110 1.15e-26 104
MsG0480020196.01.T01 MTR_2g088170 63.889 72 26 0 10 81 61 132 1.40e-26 107
MsG0480020196.01.T01 MTR_5g078930 47.414 116 47 3 10 117 41 150 5.16e-26 101
MsG0480020196.01.T01 MTR_7g109320 64.384 73 26 0 10 82 44 116 3.00e-25 102
MsG0480020196.01.T01 MTR_2g033170 63.380 71 26 0 10 80 56 126 8.84e-25 100
MsG0480020196.01.T01 MTR_3g101290 54.321 81 35 1 2 82 60 138 3.75e-24 96.7
MsG0480020196.01.T01 MTR_1g083630 54.930 71 32 0 12 82 46 116 5.34e-24 100
MsG0480020196.01.T01 MTR_4g029540 35.948 153 92 5 12 159 44 195 1.52e-23 96.7
MsG0480020196.01.T01 MTR_4g019370 39.837 123 66 3 2 122 61 177 2.39e-23 97.1
MsG0480020196.01.T01 MTR_4g123040 61.972 71 27 0 10 80 56 126 2.42e-23 96.3
MsG0480020196.01.T01 MTR_4g128190 34.127 126 72 2 10 124 30 155 3.61e-23 94.4
MsG0480020196.01.T01 MTR_8g006470 55.714 70 30 1 12 80 44 113 3.38e-22 92.8
MsG0480020196.01.T01 MTR_5g062790 51.389 72 34 1 10 80 41 112 3.57e-22 93.2
MsG0480020196.01.T01 MTR_4g094982 37.589 141 61 4 2 142 28 141 4.53e-22 92.0
MsG0480020196.01.T01 MTR_6g015455 52.500 80 36 1 2 81 28 105 6.53e-22 94.7
MsG0480020196.01.T01 MTR_3g045430 52.564 78 37 0 10 87 45 122 6.95e-22 92.0
MsG0480020196.01.T01 MTR_5g016510 47.500 80 40 1 2 81 28 105 2.35e-21 90.9
MsG0480020196.01.T01 MTR_5g088080 48.611 72 36 1 10 80 44 115 6.69e-21 89.0
MsG0480020196.01.T01 MTR_5g088150 48.611 72 36 1 10 80 44 115 6.69e-21 89.0
MsG0480020196.01.T01 MTR_5g488210 48.611 72 36 1 10 80 44 115 6.69e-21 89.0
MsG0480020196.01.T01 MTR_5g088640 48.611 72 36 1 10 80 44 115 6.98e-21 89.0
MsG0480020196.01.T01 MTR_6g074860 55.882 68 30 0 13 80 36 103 1.24e-20 87.8
MsG0480020196.01.T01 MTR_5g488170 48.611 72 36 1 10 80 44 115 1.27e-20 87.8
MsG0480020196.01.T01 MTR_5g088610 50.000 72 35 1 10 80 41 112 1.47e-20 89.4
MsG0480020196.01.T01 MTR_5g041570 41.667 96 56 0 13 108 166 261 2.96e-20 89.4
MsG0480020196.01.T01 MTR_7g451170 34.965 143 79 4 2 137 214 349 5.42e-20 88.2
MsG0480020196.01.T01 MTR_7g061330 47.561 82 41 1 2 83 136 215 8.44e-20 88.2
MsG0480020196.01.T01 MTR_7g461410 47.561 82 41 1 2 83 136 215 8.44e-20 88.2
MsG0480020196.01.T01 MTR_7g035350 27.879 165 102 2 13 162 257 419 8.48e-20 88.2
MsG0480020196.01.T01 MTR_5g070020 40.909 88 48 1 13 96 154 241 1.05e-19 87.0
MsG0480020196.01.T01 MTR_5g049190 45.588 68 37 0 13 80 51 118 1.20e-19 85.1
MsG0480020196.01.T01 MTR_7g061330 47.561 82 41 1 2 83 100 179 1.35e-19 87.8
MsG0480020196.01.T01 MTR_4g082040 32.653 147 97 1 13 159 137 281 2.10e-19 86.7
MsG0480020196.01.T01 MTR_7g037260 33.974 156 89 5 2 152 168 314 4.40e-19 85.5
MsG0480020196.01.T01 MTR_1g026870 50.000 70 35 0 14 83 118 187 6.66e-19 85.9
MsG0480020196.01.T01 MTR_3g110028 50.000 70 35 0 14 83 118 187 7.98e-19 85.9
MsG0480020196.01.T01 MTR_4g105660 32.044 181 97 8 13 174 212 385 9.76e-19 84.7
MsG0480020196.01.T01 MTR_3g463400 44.928 69 38 0 13 81 165 233 1.19e-18 84.7
MsG0480020196.01.T01 MTR_1g057980 28.916 166 99 3 2 152 103 264 1.41e-18 83.2
MsG0480020196.01.T01 MTR_7g086960 42.241 116 65 2 13 127 121 235 5.42e-18 82.4
MsG0480020196.01.T01 MTR_4g088015 40.506 79 45 1 2 80 244 320 9.18e-18 82.0
MsG0480020196.01.T01 MTR_3g077650 42.029 69 40 0 13 81 213 281 9.32e-18 82.0
MsG0480020196.01.T01 MTR_7g450950 29.299 157 95 5 2 156 180 322 1.05e-17 81.3
MsG0480020196.01.T01 MTR_6g027340 44.928 69 38 0 13 81 48 116 1.19e-17 79.0
MsG0480020196.01.T01 MTR_5g082910 46.753 77 39 1 2 78 42 116 2.02e-17 79.7
MsG0480020196.01.T01 MTR_6g027360 44.928 69 38 0 13 81 110 178 3.25e-17 79.3
MsG0480020196.01.T01 MTR_6g055910 53.846 65 20 1 36 100 2 56 1.10e-16 76.6
MsG0480020196.01.T01 MTR_6g027370 47.826 69 36 0 13 81 131 199 1.63e-16 78.2
MsG0480020196.01.T01 MTR_3g089045 52.941 68 32 0 14 81 49 116 2.84e-16 76.6
MsG0480020196.01.T01 MTR_5g007300 68.889 45 14 0 10 54 96 140 3.33e-16 73.6
MsG0480020196.01.T01 MTR_1g085880 46.053 76 40 1 10 84 44 119 2.31e-15 72.4
MsG0480020196.01.T01 MTR_7g061550 42.254 71 41 0 6 76 35 105 2.50e-15 74.7
MsG0480020196.01.T01 MTR_1g085770 46.053 76 40 1 10 84 44 119 4.34e-15 73.6
MsG0480020196.01.T01 MTR_7g037130 30.323 155 96 4 2 152 168 314 6.54e-15 73.6
MsG0480020196.01.T01 MTR_5g010650 43.243 74 40 1 2 75 133 204 1.74e-14 72.8
MsG0480020196.01.T01 MTR_4g063100 60.870 46 18 0 36 81 1 46 2.53e-14 69.7
MsG0480020196.01.T01 MTR_2g096380 47.458 59 31 0 36 94 1 59 1.61e-13 67.0
MsG0480020196.01.T01 MTR_8g468380 39.785 93 44 1 17 109 58 138 9.68e-13 67.4
MsG0480020196.01.T01 MTR_5g038910 40.278 72 43 0 17 88 62 133 3.41e-12 65.9
MsG0480020196.01.T01 MTR_5g038910 40.278 72 43 0 17 88 62 133 5.58e-12 65.1
MsG0480020196.01.T01 MTR_2g088730 61.538 39 15 0 36 74 34 72 7.48e-12 60.1
MsG0480020196.01.T01 MTR_1g008970 36.170 94 59 1 13 106 123 215 3.55e-11 62.0
MsG0480020196.01.T01 MTR_1g076150 37.069 116 63 4 51 166 33 138 5.52e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020196.01.T01 AT2G31180 48.214 168 56 5 10 169 44 188 8.95e-40 138
MsG0480020196.01.T01 AT1G06180 45.963 161 72 5 9 169 43 188 9.22e-39 135
MsG0480020196.01.T01 AT3G23250 42.778 180 81 4 10 168 44 222 1.22e-37 133
MsG0480020196.01.T01 AT1G22640 46.358 151 61 4 10 152 44 182 1.88e-37 132
MsG0480020196.01.T01 AT5G14750 75.342 73 18 0 10 82 48 120 4.24e-37 129
MsG0480020196.01.T01 AT2G16720 57.944 107 37 2 10 108 44 150 1.41e-36 130
MsG0480020196.01.T01 AT5G40330 73.973 73 19 0 10 82 44 116 5.94e-36 127
MsG0480020196.01.T01 AT5G14750 76.812 69 16 0 14 82 18 86 6.96e-36 125
MsG0480020196.01.T01 AT1G79180 41.500 200 89 4 10 200 46 226 8.80e-36 129
MsG0480020196.01.T01 AT3G27920 72.603 73 20 0 10 82 46 118 8.92e-36 127
MsG0480020196.01.T01 AT1G16490 62.069 87 33 0 10 96 46 132 9.76e-36 128
MsG0480020196.01.T01 AT3G13540 42.690 171 77 4 10 165 55 219 1.16e-35 127
MsG0480020196.01.T01 AT1G79180 41.206 199 89 4 11 200 80 259 4.41e-35 127
MsG0480020196.01.T01 AT5G16770 71.233 73 21 0 10 82 44 116 8.57e-35 127
MsG0480020196.01.T01 AT5G16770 71.233 73 21 0 10 82 44 116 8.57e-35 127
MsG0480020196.01.T01 AT5G12870 71.233 73 21 0 10 82 50 122 1.08e-34 125
MsG0480020196.01.T01 AT5G16770 71.233 73 21 0 10 82 44 116 1.25e-34 127
MsG0480020196.01.T01 AT5G16770 71.233 73 21 0 10 82 44 116 1.25e-34 127
MsG0480020196.01.T01 AT5G35550 62.791 86 32 0 9 94 48 133 1.52e-34 124
MsG0480020196.01.T01 AT3G61250 70.270 74 22 0 9 82 43 116 2.18e-34 125
MsG0480020196.01.T01 AT3G27810 39.394 165 93 4 11 169 4 167 2.55e-34 122
MsG0480020196.01.T01 AT4G01680 56.731 104 34 2 10 102 44 147 2.57e-34 124
MsG0480020196.01.T01 AT3G02940 69.863 73 22 0 10 82 44 116 5.70e-34 124
MsG0480020196.01.T01 AT3G27810 39.157 166 94 4 10 169 52 216 7.60e-34 122
MsG0480020196.01.T01 AT4G01680 56.190 105 35 2 10 103 44 148 9.08e-34 124
MsG0480020196.01.T01 AT5G52600 76.389 72 17 0 10 81 44 115 9.33e-34 121
MsG0480020196.01.T01 AT3G02940 69.863 73 22 0 10 82 44 116 9.68e-34 124
MsG0480020196.01.T01 AT3G02940 69.863 73 22 0 10 82 44 116 9.68e-34 124
MsG0480020196.01.T01 AT1G09540 54.639 97 44 0 9 105 43 139 1.03e-33 125
MsG0480020196.01.T01 AT4G01680 55.140 107 37 2 8 103 54 160 1.20e-33 124
MsG0480020196.01.T01 AT5G35550 71.233 73 21 0 10 82 46 118 1.53e-33 122
MsG0480020196.01.T01 AT5G54230 69.863 73 22 0 10 82 44 116 1.78e-33 123
MsG0480020196.01.T01 AT4G38620 64.103 78 28 0 10 87 44 121 1.79e-33 122
MsG0480020196.01.T01 AT5G26660 66.234 77 26 0 11 87 14 90 1.96e-33 123
MsG0480020196.01.T01 AT5G26660 64.557 79 28 0 9 87 43 121 2.97e-33 123
MsG0480020196.01.T01 AT3G01140 72.603 73 20 0 10 82 44 116 3.70e-33 123
MsG0480020196.01.T01 AT4G28110 47.500 120 56 2 10 122 44 163 3.82e-33 121
MsG0480020196.01.T01 AT4G05100 68.493 73 23 0 10 82 45 117 6.45e-33 122
MsG0480020196.01.T01 AT5G65230 66.216 74 25 0 9 82 43 116 6.99e-33 121
MsG0480020196.01.T01 AT3G01140 72.603 73 20 0 10 82 87 159 7.44e-33 123
MsG0480020196.01.T01 AT5G15310 71.233 73 21 0 10 82 44 116 7.45e-33 120
MsG0480020196.01.T01 AT4G17785 54.167 96 43 1 9 103 44 139 9.13e-33 122
MsG0480020196.01.T01 AT4G17785 54.167 96 43 1 9 103 44 139 9.56e-33 122
MsG0480020196.01.T01 AT5G15310 71.233 73 21 0 10 82 44 116 1.12e-32 121
MsG0480020196.01.T01 AT5G15310 71.233 73 21 0 10 82 44 116 1.15e-32 121
MsG0480020196.01.T01 AT1G56160 67.568 74 24 0 9 82 45 118 1.22e-32 120
MsG0480020196.01.T01 AT1G74430 64.103 78 28 0 10 87 44 121 1.30e-32 120
MsG0480020196.01.T01 AT4G09460 65.753 73 25 0 10 82 44 116 1.34e-32 119
MsG0480020196.01.T01 AT5G62320 64.865 74 26 0 9 82 51 124 2.08e-32 119
MsG0480020196.01.T01 AT3G12820 66.216 74 25 0 9 82 45 118 2.12e-32 118
MsG0480020196.01.T01 AT3G08500 68.493 73 23 0 10 82 62 134 2.57e-32 120
MsG0480020196.01.T01 AT1G57560 50.495 101 42 1 9 101 43 143 2.69e-32 119
MsG0480020196.01.T01 AT5G10280 64.865 74 26 0 9 82 43 116 2.71e-32 120
MsG0480020196.01.T01 AT4G34990 67.123 73 24 0 10 82 44 116 2.77e-32 119
MsG0480020196.01.T01 AT1G35515 65.278 72 25 0 11 82 45 116 2.88e-32 117
MsG0480020196.01.T01 AT3G13890 67.123 73 24 0 10 82 44 116 3.04e-32 121
MsG0480020196.01.T01 AT4G21440 67.123 73 24 0 10 82 44 116 4.15e-32 120
MsG0480020196.01.T01 AT3G01530 64.384 73 26 0 10 82 57 129 4.78e-32 117
MsG0480020196.01.T01 AT1G57560 63.514 74 27 0 9 82 43 116 5.07e-32 119
MsG0480020196.01.T01 AT3G13890 62.963 81 28 1 2 82 47 125 6.81e-32 120
MsG0480020196.01.T01 AT5G55020 67.606 71 23 0 10 80 58 128 7.55e-32 122
MsG0480020196.01.T01 AT5G60890 60.494 81 32 0 10 90 44 124 8.01e-32 118
MsG0480020196.01.T01 AT3G12720 60.811 74 29 0 9 82 53 126 9.10e-32 119
MsG0480020196.01.T01 AT5G06100 65.278 72 25 0 10 81 64 135 9.70e-32 121
MsG0480020196.01.T01 AT3G11440 63.889 72 26 0 10 81 73 144 1.10e-31 121
MsG0480020196.01.T01 AT4G12350 63.291 79 29 0 9 87 43 121 1.30e-31 117
MsG0480020196.01.T01 AT2G32460 66.667 72 24 0 10 81 38 109 1.58e-31 121
MsG0480020196.01.T01 AT2G32460 66.667 72 24 0 10 81 50 121 1.65e-31 121
MsG0480020196.01.T01 AT1G25340 43.885 139 68 2 10 141 50 185 1.77e-31 117
MsG0480020196.01.T01 AT5G56110 67.123 73 24 0 10 82 44 116 1.80e-31 118
MsG0480020196.01.T01 AT1G18570 52.679 112 49 2 10 121 45 152 2.13e-31 118
MsG0480020196.01.T01 AT1G08810 41.975 162 81 3 10 171 44 192 2.16e-31 117
MsG0480020196.01.T01 AT5G06100 65.278 72 25 0 10 81 64 135 2.28e-31 121
MsG0480020196.01.T01 AT5G06100 65.278 72 25 0 10 81 64 135 2.28e-31 121
MsG0480020196.01.T01 AT5G06100 65.278 72 25 0 10 81 64 135 2.28e-31 121
MsG0480020196.01.T01 AT5G06100 65.278 72 25 0 10 81 64 135 2.28e-31 121
MsG0480020196.01.T01 AT3G11440 65.714 70 24 0 12 81 75 144 2.44e-31 121
MsG0480020196.01.T01 AT3G11440 65.714 70 24 0 12 81 75 144 2.44e-31 121
MsG0480020196.01.T01 AT3G11440 65.714 70 24 0 12 81 75 144 2.44e-31 121
MsG0480020196.01.T01 AT4G26930 66.667 69 23 0 12 80 53 121 2.46e-31 119
MsG0480020196.01.T01 AT3G49690 57.831 83 35 0 11 93 46 128 2.85e-31 117
MsG0480020196.01.T01 AT3G12820 68.116 69 22 0 14 82 2 70 3.00e-31 114
MsG0480020196.01.T01 AT1G63910 64.384 73 26 0 10 82 44 116 5.18e-31 118
MsG0480020196.01.T01 AT3G46130 63.158 76 28 0 7 82 6 81 5.49e-31 114
MsG0480020196.01.T01 AT2G47460 64.103 78 27 1 10 87 44 120 5.83e-31 117
MsG0480020196.01.T01 AT5G14340 61.842 76 29 0 9 84 55 130 6.12e-31 115
MsG0480020196.01.T01 AT5G65790 55.814 86 38 0 11 96 46 131 7.59e-31 117
MsG0480020196.01.T01 AT5G07700 67.123 73 24 0 10 82 44 116 7.65e-31 117
MsG0480020196.01.T01 AT5G07700 67.123 73 24 0 10 82 44 116 7.65e-31 117
MsG0480020196.01.T01 AT5G59780 60.256 78 31 0 9 86 39 116 8.52e-31 114
MsG0480020196.01.T01 AT5G40350 36.810 163 92 3 11 169 5 160 9.09e-31 112
MsG0480020196.01.T01 AT1G66230 45.455 110 52 1 9 110 43 152 1.13e-30 115
MsG0480020196.01.T01 AT1G74650 67.123 73 24 0 10 82 44 116 1.14e-30 116
MsG0480020196.01.T01 AT4G22680 62.162 74 28 0 9 82 43 116 1.34e-30 114
MsG0480020196.01.T01 AT5G16600 63.514 74 27 0 9 82 43 116 1.39e-30 116
MsG0480020196.01.T01 AT3G46130 63.514 74 27 0 9 82 40 113 1.56e-30 114
MsG0480020196.01.T01 AT5G61420 65.753 73 25 0 10 82 44 116 1.88e-30 116
MsG0480020196.01.T01 AT5G57620 63.889 72 26 0 11 82 46 117 1.99e-30 115
MsG0480020196.01.T01 AT5G40350 36.585 164 93 3 10 169 49 205 2.24e-30 112
MsG0480020196.01.T01 AT3G62610 63.014 73 27 0 10 82 44 116 2.85e-30 115
MsG0480020196.01.T01 AT5G49330 64.384 73 26 0 10 82 44 116 4.56e-30 115
MsG0480020196.01.T01 AT1G68320 54.255 94 40 1 9 102 50 140 4.61e-30 114
MsG0480020196.01.T01 AT1G18710 58.974 78 32 0 10 87 44 121 5.58e-30 113
MsG0480020196.01.T01 AT3G47600 65.278 72 25 0 11 82 39 110 5.85e-30 114
MsG0480020196.01.T01 AT1G34670 38.217 157 95 1 9 163 43 199 6.03e-30 115
MsG0480020196.01.T01 AT3G28910 63.514 74 27 0 10 83 44 117 6.64e-30 114
MsG0480020196.01.T01 AT3G47600 64.384 73 26 0 10 82 44 116 6.71e-30 114
MsG0480020196.01.T01 AT4G13480 57.955 88 36 1 9 96 37 123 7.38e-30 112
MsG0480020196.01.T01 AT2G26960 64.789 71 25 0 10 80 52 122 7.46e-30 115
MsG0480020196.01.T01 AT5G59780 60.526 76 30 0 11 86 20 95 9.09e-30 111
MsG0480020196.01.T01 AT2G47190 61.333 75 29 0 10 84 52 126 1.13e-29 112
MsG0480020196.01.T01 AT5G07690 66.197 71 24 0 10 80 44 114 1.19e-29 114
MsG0480020196.01.T01 AT3G46130 60.526 76 30 0 11 86 20 95 1.23e-29 111
MsG0480020196.01.T01 AT5G62470 50.000 106 51 1 10 115 44 147 1.46e-29 114
MsG0480020196.01.T01 AT3G24310 54.945 91 40 1 9 99 49 138 1.62e-29 112
MsG0480020196.01.T01 AT5G23000 61.644 73 28 0 10 82 45 117 1.77e-29 113
MsG0480020196.01.T01 AT1G66370 46.970 132 56 5 10 141 40 157 2.80e-29 110
MsG0480020196.01.T01 AT5G52260 48.718 117 53 2 8 118 42 157 4.83e-29 110
MsG0480020196.01.T01 AT3G48920 63.014 73 27 0 10 82 50 122 5.13e-29 110
MsG0480020196.01.T01 AT4G37780 61.111 72 28 0 11 82 46 117 5.54e-29 111
MsG0480020196.01.T01 AT3G28470 68.657 67 21 0 10 76 44 110 1.09e-28 110
MsG0480020196.01.T01 AT1G25340 42.857 133 66 2 16 141 51 180 1.13e-28 110
MsG0480020196.01.T01 AT3G30210 51.000 100 45 1 9 108 58 153 1.38e-28 109
MsG0480020196.01.T01 AT2G36890 61.644 73 28 0 10 82 45 117 1.50e-28 110
MsG0480020196.01.T01 AT1G74080 64.789 71 25 0 10 80 44 114 2.41e-28 110
MsG0480020196.01.T01 AT1G25340 42.857 133 66 2 16 141 51 180 2.80e-28 109
MsG0480020196.01.T01 AT2G36890 61.644 73 28 0 10 82 86 158 3.04e-28 110
MsG0480020196.01.T01 AT3G53200 59.211 76 31 0 8 83 39 114 3.35e-28 107
MsG0480020196.01.T01 AT5G62470 50.000 102 49 1 14 115 47 146 4.75e-28 109
MsG0480020196.01.T01 AT1G48000 61.972 71 27 0 10 80 64 134 5.47e-28 107
MsG0480020196.01.T01 AT4G25560 63.889 72 26 0 10 81 42 113 9.38e-28 107
MsG0480020196.01.T01 AT3G53200 60.274 73 29 0 11 83 9 81 1.63e-27 105
MsG0480020196.01.T01 AT1G22640 42.336 137 59 4 24 152 1 125 3.87e-27 103
MsG0480020196.01.T01 AT3G23250 71.667 60 17 0 24 83 1 60 6.06e-27 104
MsG0480020196.01.T01 AT5G14750 72.881 59 16 0 24 82 1 59 1.59e-26 100
MsG0480020196.01.T01 AT5G14750 72.881 59 16 0 24 82 1 59 1.59e-26 100
MsG0480020196.01.T01 AT3G06490 59.211 76 31 0 9 84 50 125 7.73e-25 100
MsG0480020196.01.T01 AT1G66380 66.197 71 24 0 11 81 8 78 3.30e-24 93.6
MsG0480020196.01.T01 AT1G66380 59.036 83 34 0 10 92 40 122 1.01e-23 93.2
MsG0480020196.01.T01 AT5G49620 63.768 69 25 0 12 80 60 128 1.01e-23 97.4
MsG0480020196.01.T01 AT1G56650 40.132 152 74 3 10 150 40 185 3.63e-23 94.7
MsG0480020196.01.T01 AT1G66390 63.889 72 26 0 10 81 40 111 1.38e-22 93.2
MsG0480020196.01.T01 AT3G09230 48.889 90 43 2 2 90 78 165 4.34e-22 94.0
MsG0480020196.01.T01 AT5G11510 50.000 82 39 1 2 83 104 183 5.14e-22 95.1
MsG0480020196.01.T01 AT5G11510 50.000 82 39 1 2 83 104 183 5.14e-22 95.1
MsG0480020196.01.T01 AT5G11510 50.000 82 39 1 2 83 104 183 5.14e-22 95.1
MsG0480020196.01.T01 AT5G11510 50.000 82 39 1 2 83 104 183 5.95e-22 94.7
MsG0480020196.01.T01 AT5G11510 50.000 82 39 1 2 83 104 183 6.60e-22 94.7
MsG0480020196.01.T01 AT2G26950 52.239 67 32 0 10 76 48 114 8.58e-22 93.2
MsG0480020196.01.T01 AT1G71030 56.061 66 29 0 17 82 5 70 1.31e-21 89.0
MsG0480020196.01.T01 AT1G71030 56.061 66 29 0 17 82 19 84 1.88e-21 89.0
MsG0480020196.01.T01 AT3G60460 53.247 77 33 2 12 85 45 121 2.08e-21 90.9
MsG0480020196.01.T01 AT4G33450 53.425 73 34 0 13 85 51 123 7.17e-21 88.6
MsG0480020196.01.T01 AT4G37260 48.148 81 40 1 2 82 36 114 7.74e-21 89.7
MsG0480020196.01.T01 AT3G50060 39.815 108 62 2 2 108 29 134 7.85e-21 89.4
MsG0480020196.01.T01 AT1G17950 56.522 69 30 0 13 81 37 105 1.88e-20 87.4
MsG0480020196.01.T01 AT3G27785 43.750 96 45 3 2 97 212 298 2.52e-20 89.4
MsG0480020196.01.T01 AT5G49620 53.012 83 25 1 12 80 60 142 3.74e-20 87.8
MsG0480020196.01.T01 AT2G39880 50.000 80 38 1 2 81 73 150 4.02e-20 88.2
MsG0480020196.01.T01 AT1G69560 52.174 69 33 0 13 81 139 207 5.08e-20 87.8
MsG0480020196.01.T01 AT1G69560 52.941 68 32 0 14 81 156 223 6.13e-20 87.8
MsG0480020196.01.T01 AT1G26780 52.174 69 33 0 13 81 130 198 6.88e-20 86.7
MsG0480020196.01.T01 AT2G25230 48.611 72 36 1 13 84 58 128 7.15e-20 85.5
MsG0480020196.01.T01 AT1G26780 52.174 69 33 0 13 81 130 198 7.58e-20 87.4
MsG0480020196.01.T01 AT2G23290 46.914 81 41 1 2 82 36 114 1.02e-19 86.7
MsG0480020196.01.T01 AT3G55730 48.750 80 39 1 2 81 79 156 1.18e-19 87.4
MsG0480020196.01.T01 AT5G40360 47.059 68 36 0 13 80 190 257 2.09e-19 86.3
MsG0480020196.01.T01 AT5G67300 46.250 80 41 1 2 81 29 106 2.13e-19 85.5
MsG0480020196.01.T01 AT5G02320 43.902 82 44 1 2 83 150 229 8.03e-19 85.5
MsG0480020196.01.T01 AT5G02320 43.902 82 44 1 2 83 150 229 8.03e-19 85.5
MsG0480020196.01.T01 AT5G17800 40.594 101 58 1 12 110 124 224 8.33e-19 84.3
MsG0480020196.01.T01 AT5G02320 43.902 82 44 1 2 83 90 169 9.81e-19 85.1
MsG0480020196.01.T01 AT3G09370 35.714 126 75 2 2 123 158 281 1.09e-18 85.1
MsG0480020196.01.T01 AT3G09370 35.714 126 75 2 2 123 153 276 1.12e-18 85.1
MsG0480020196.01.T01 AT4G18770 44.928 69 38 0 13 81 249 317 1.15e-18 84.7
MsG0480020196.01.T01 AT3G09370 35.714 126 75 2 2 123 166 289 1.24e-18 85.1
MsG0480020196.01.T01 AT4G32730 43.902 82 44 1 2 83 110 189 1.29e-18 85.1
MsG0480020196.01.T01 AT1G18960 46.250 80 41 1 11 90 40 117 1.30e-18 83.6
MsG0480020196.01.T01 AT4G32730 43.902 82 44 1 2 83 110 189 1.38e-18 85.1
MsG0480020196.01.T01 AT4G32730 43.902 82 44 1 2 83 110 189 1.38e-18 85.1
MsG0480020196.01.T01 AT4G32730 43.902 82 44 1 2 83 110 189 1.38e-18 85.1
MsG0480020196.01.T01 AT4G32730 43.902 82 44 1 2 83 110 189 1.38e-18 85.1
MsG0480020196.01.T01 AT3G29020 38.298 94 58 0 13 106 97 190 2.51e-18 81.3
MsG0480020196.01.T01 AT3G29020 38.298 94 58 0 13 106 99 192 2.66e-18 82.4
MsG0480020196.01.T01 AT1G73410 55.714 70 31 0 13 82 38 107 3.44e-18 81.3
MsG0480020196.01.T01 AT1G73410 56.522 69 30 0 13 81 38 106 5.55e-18 79.7
MsG0480020196.01.T01 AT5G58850 42.647 68 39 0 14 81 138 205 6.59e-18 82.4
MsG0480020196.01.T01 AT5G11050 42.029 69 40 0 13 81 137 205 2.97e-17 80.5
MsG0480020196.01.T01 AT2G37630 47.143 70 37 0 7 76 33 102 5.39e-17 79.7
MsG0480020196.01.T01 AT4G00540 45.070 71 39 0 14 84 139 209 6.51e-17 79.7
MsG0480020196.01.T01 AT4G00540 44.444 72 40 0 13 84 136 207 8.91e-17 79.3
MsG0480020196.01.T01 AT5G40430 43.056 72 40 1 13 84 85 155 1.90e-16 76.6
MsG0480020196.01.T01 AT5G59780 59.574 47 19 0 36 82 1 47 9.67e-15 70.5
MsG0480020196.01.T01 AT3G46130 59.574 47 19 0 36 82 1 47 1.36e-14 70.5
MsG0480020196.01.T01 AT5G39700 42.857 77 44 0 14 90 89 165 2.49e-14 69.7
MsG0480020196.01.T01 AT1G14350 43.056 72 41 0 17 88 61 132 8.13e-14 70.9
MsG0480020196.01.T01 AT1G14350 43.056 72 41 0 17 88 61 132 8.13e-14 70.9
MsG0480020196.01.T01 AT4G25560 60.870 46 18 0 36 81 2 47 1.57e-13 68.2
MsG0480020196.01.T01 AT2G02820 40.000 75 45 0 14 88 63 137 3.05e-13 68.9
MsG0480020196.01.T01 AT2G02820 41.667 72 42 0 17 88 66 137 3.41e-13 68.9
MsG0480020196.01.T01 AT2G02820 41.667 72 42 0 17 88 66 137 3.69e-13 68.2
MsG0480020196.01.T01 AT1G14350 38.961 77 47 0 22 98 23 99 6.65e-12 65.1
MsG0480020196.01.T01 AT1G14350 38.961 77 47 0 22 98 23 99 6.65e-12 65.1

Find 42 sgRNAs with CRISPR-Local

Find 59 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGACGTGGATGAAAGATTT+TGG 0.162901 4:+36097106 MsG0480020196.01.T01:CDS
ACCACTTATGAGGATGATTT+TGG 0.206289 4:+36097063 MsG0480020196.01.T01:CDS
TGTGATCAACTCTCTTCTTT+AGG 0.212201 4:-36096861 None:intergenic
CTTTCATCGAATGAATGATT+TGG 0.271431 4:-36097220 None:intergenic
GTGATCAACTCTCTTCTTTA+GGG 0.294729 4:-36096860 None:intergenic
TAGTATATGATGAGGATATT+TGG 0.326391 4:+36097395 MsG0480020196.01.T01:CDS
ACTTCATTATCTGTTCTTCC+AGG 0.339491 4:-36096817 None:intergenic
GATGATGAAAGTGGGGATAA+TGG 0.387971 4:-36097003 None:intergenic
ACATTGAATCCACAAAAGAT+AGG 0.404787 4:+36096920 MsG0480020196.01.T01:CDS
CTTTCACCAAGTTACTCATT+CGG 0.427003 4:+36096951 MsG0480020196.01.T01:CDS
ATAATGAAGTGAAGAACTAT+TGG 0.433566 4:+36096830 MsG0480020196.01.T01:CDS
TCCATTGCGGCCGAGTTACC+TGG 0.444960 4:+36096799 MsG0480020196.01.T01:CDS
TCGGCAAAGGTGTCAGCAAT+TGG 0.456772 4:-36097351 None:intergenic
GACCAGTGATGTCTGAGGTT+TGG 0.465299 4:-36096981 None:intergenic
CTAAGACCTAATATCAAAAG+AGG 0.476128 4:+36096709 MsG0480020196.01.T01:CDS
TCAGCAATTGGCTTGGAACT+TGG 0.483881 4:-36097339 None:intergenic
ATCTGTTCTTCCAGGTAACT+CGG 0.488002 4:-36096809 None:intergenic
ACCAAAATCATCCTCATAAG+TGG 0.490259 4:-36097064 None:intergenic
TTTCAGGTCTTTCAAGGTGT+GGG 0.511467 4:+36096656 MsG0480020196.01.T01:CDS
CACTATTCCACTTGGTGTGT+CGG 0.513065 4:-36097139 None:intergenic
TCCAGGTAACTCGGCCGCAA+TGG 0.515613 4:-36096800 None:intergenic
ATTTCAGGTCTTTCAAGGTG+TGG 0.520974 4:+36096655 MsG0480020196.01.T01:CDS
ATTGCTGACACCTTTGCCGA+TGG 0.525845 4:+36097354 MsG0480020196.01.T01:CDS
AGATCACAGTACCACTTATG+AGG 0.534762 4:+36097053 MsG0480020196.01.T01:CDS
AATTCACTAGATGATGAAAG+TGG 0.546186 4:-36097012 None:intergenic
TTCCACTTGGTGTGTCGGAA+AGG 0.550723 4:-36097134 None:intergenic
CATTGAATCCACAAAAGATA+GGG 0.551489 4:+36096921 MsG0480020196.01.T01:CDS
TTGTTCTGCACTATTCCACT+TGG 0.559068 4:-36097147 None:intergenic
CGAATGAGTAACTTGGTGAA+AGG 0.561074 4:-36096950 None:intergenic
GGAAGAGTTGTAGATTGAGA+TGG 0.566126 4:+36096677 MsG0480020196.01.T01:CDS
ATTCACTAGATGATGAAAGT+GGG 0.574282 4:-36097011 None:intergenic
TATTCAGATTCCATCGGCAA+AGG 0.574722 4:-36097364 None:intergenic
AAACTTCACTCAACAAGAAG+AGG 0.574927 4:+36096732 MsG0480020196.01.T01:CDS
GACTAGCCGAATGAGTAACT+TGG 0.577346 4:-36096957 None:intergenic
AAAGGTGTCAGCAATTGGCT+TGG 0.581520 4:-36097346 None:intergenic
CTCCAAACCTCAGACATCAC+TGG 0.591035 4:+36096979 MsG0480020196.01.T01:CDS
TTCACTAGATGATGAAAGTG+GGG 0.630465 4:-36097010 None:intergenic
GAATAGATGGTCATCCATTG+CGG 0.633326 4:+36096786 MsG0480020196.01.T01:CDS
AGATGGATTAATAGAAGACG+TGG 0.651506 4:+36097092 MsG0480020196.01.T01:CDS
GACCTTTCCGACACACCAAG+TGG 0.657460 4:+36097132 MsG0480020196.01.T01:CDS
ACTGTGATCTGAATAATCTG+TGG 0.669958 4:-36097040 None:intergenic
TAATGGACCAGTGATGTCTG+AGG 0.689225 4:-36096986 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATCAAGATACTAATGT+TGG + Chr4:36097186-36097205 MsG0480020196.01.T01:intron 20.0%
!!! TTTGTTTTGGATAATGATTT+TGG + Chr4:36097244-36097263 MsG0480020196.01.T01:CDS 20.0%
!!! TTTTTCTATAGTATATGATG+AGG + Chr4:36097387-36097406 MsG0480020196.01.T01:CDS 20.0%
! ATAATGAAGTGAAGAACTAT+TGG + Chr4:36096830-36096849 MsG0480020196.01.T01:CDS 25.0%
! GAAAAATATTCAGATTCCAT+CGG - Chr4:36097373-36097392 None:intergenic 25.0%
! TAGTATATGATGAGGATATT+TGG + Chr4:36097395-36097414 MsG0480020196.01.T01:CDS 25.0%
!! AAGTTTCCTCTTTTGATATT+AGG - Chr4:36096718-36096737 None:intergenic 25.0%
!!! AGTCAACAATTGATAGTTTT+TGG + Chr4:36097290-36097309 MsG0480020196.01.T01:CDS 25.0%
!!! ATTCGATGAAAGTTTTGTTT+TGG + Chr4:36097231-36097250 MsG0480020196.01.T01:CDS 25.0%
AATTCACTAGATGATGAAAG+TGG - Chr4:36097015-36097034 None:intergenic 30.0%
ACATTGAATCCACAAAAGAT+AGG + Chr4:36096920-36096939 MsG0480020196.01.T01:CDS 30.0%
ATAAAAAGCTTGGGAATAGA+TGG + Chr4:36096773-36096792 MsG0480020196.01.T01:CDS 30.0%
ATTCACTAGATGATGAAAGT+GGG - Chr4:36097014-36097033 None:intergenic 30.0%
CATTGAATCCACAAAAGATA+GGG + Chr4:36096921-36096940 MsG0480020196.01.T01:CDS 30.0%
CTAAGACCTAATATCAAAAG+AGG + Chr4:36096709-36096728 MsG0480020196.01.T01:CDS 30.0%
CTTTCATCGAATGAATGATT+TGG - Chr4:36097223-36097242 None:intergenic 30.0%
!! GGATTCAATGTCTTTTGATT+TGG - Chr4:36096911-36096930 None:intergenic 30.0%
!!! CTATTGCATCGTTTTATTTC+AGG + Chr4:36096640-36096659 MsG0480020196.01.T01:CDS 30.0%
!!! GATGATTTTGGTTTTCTAGA+TGG + Chr4:36097075-36097094 MsG0480020196.01.T01:CDS 30.0%
!!! GTTTTATTTCAGGTCTTTCA+AGG + Chr4:36096650-36096669 MsG0480020196.01.T01:CDS 30.0%
AAACTTCACTCAACAAGAAG+AGG + Chr4:36096732-36096751 MsG0480020196.01.T01:CDS 35.0%
ACCAAAATCATCCTCATAAG+TGG - Chr4:36097067-36097086 None:intergenic 35.0%
ACTGTGATCTGAATAATCTG+TGG - Chr4:36097043-36097062 None:intergenic 35.0%
ACTTCATTATCTGTTCTTCC+AGG - Chr4:36096820-36096839 None:intergenic 35.0%
ATCCGAATGCATAAAAAGCT+TGG + Chr4:36096763-36096782 MsG0480020196.01.T01:CDS 35.0%
CTTTCACCAAGTTACTCATT+CGG + Chr4:36096951-36096970 MsG0480020196.01.T01:CDS 35.0%
GTGATCAACTCTCTTCTTTA+GGG - Chr4:36096863-36096882 None:intergenic 35.0%
TCCGAATGCATAAAAAGCTT+GGG + Chr4:36096764-36096783 MsG0480020196.01.T01:CDS 35.0%
TGTGATCAACTCTCTTCTTT+AGG - Chr4:36096864-36096883 None:intergenic 35.0%
TTCACTAGATGATGAAAGTG+GGG - Chr4:36097013-36097032 None:intergenic 35.0%
! AAGACGTGGATGAAAGATTT+TGG + Chr4:36097106-36097125 MsG0480020196.01.T01:CDS 35.0%
! ACCACTTATGAGGATGATTT+TGG + Chr4:36097063-36097082 MsG0480020196.01.T01:CDS 35.0%
! AGACGTGGATGAAAGATTTT+GGG + Chr4:36097107-36097126 MsG0480020196.01.T01:CDS 35.0%
! GGAAATATCCCTATCTTTTG+TGG - Chr4:36096932-36096951 None:intergenic 35.0%
! TCCCAAGCTTTTTATGCATT+CGG - Chr4:36096768-36096787 None:intergenic 35.0%
!! AGATGGATTAATAGAAGACG+TGG + Chr4:36097092-36097111 MsG0480020196.01.T01:CDS 35.0%
AGATCACAGTACCACTTATG+AGG + Chr4:36097053-36097072 MsG0480020196.01.T01:CDS 40.0%
ATCTGTTCTTCCAGGTAACT+CGG - Chr4:36096812-36096831 None:intergenic 40.0%
GAATAGATGGTCATCCATTG+CGG + Chr4:36096786-36096805 MsG0480020196.01.T01:CDS 40.0%
GATGATGAAAGTGGGGATAA+TGG - Chr4:36097006-36097025 None:intergenic 40.0%
GGAAGAGTTGTAGATTGAGA+TGG + Chr4:36096677-36096696 MsG0480020196.01.T01:CDS 40.0%
TATTCAGATTCCATCGGCAA+AGG - Chr4:36097367-36097386 None:intergenic 40.0%
TTGTTCTGCACTATTCCACT+TGG - Chr4:36097150-36097169 None:intergenic 40.0%
! ATTTCAGGTCTTTCAAGGTG+TGG + Chr4:36096655-36096674 MsG0480020196.01.T01:CDS 40.0%
! CGAATGAGTAACTTGGTGAA+AGG - Chr4:36096953-36096972 None:intergenic 40.0%
! TTTCAGGTCTTTCAAGGTGT+GGG + Chr4:36096656-36096675 MsG0480020196.01.T01:CDS 40.0%
! GACTAGCCGAATGAGTAACT+TGG - Chr4:36096960-36096979 None:intergenic 45.0%
! TAATGGACCAGTGATGTCTG+AGG - Chr4:36096989-36097008 None:intergenic 45.0%
!! AAAGGTGTCAGCAATTGGCT+TGG - Chr4:36097349-36097368 None:intergenic 45.0%
!! CACTATTCCACTTGGTGTGT+CGG - Chr4:36097142-36097161 None:intergenic 45.0%
!! TCAGCAATTGGCTTGGAACT+TGG - Chr4:36097342-36097361 None:intergenic 45.0%
ATTGCTGACACCTTTGCCGA+TGG + Chr4:36097354-36097373 MsG0480020196.01.T01:CDS 50.0%
CTCCAAACCTCAGACATCAC+TGG + Chr4:36096979-36096998 MsG0480020196.01.T01:CDS 50.0%
! GACCAGTGATGTCTGAGGTT+TGG - Chr4:36096984-36097003 None:intergenic 50.0%
!! TCGGCAAAGGTGTCAGCAAT+TGG - Chr4:36097354-36097373 None:intergenic 50.0%
!! TTCCACTTGGTGTGTCGGAA+AGG - Chr4:36097137-36097156 None:intergenic 50.0%
GACCTTTCCGACACACCAAG+TGG + Chr4:36097132-36097151 MsG0480020196.01.T01:CDS 55.0%
TCCAGGTAACTCGGCCGCAA+TGG - Chr4:36096803-36096822 None:intergenic 60.0%
TCCATTGCGGCCGAGTTACC+TGG + Chr4:36096799-36096818 MsG0480020196.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr4 gene 36096631 36097423 36096631 ID=MsG0480020196.01;Name=MsG0480020196.01
Chr4 mRNA 36096631 36097423 36096631 ID=MsG0480020196.01.T01;Parent=MsG0480020196.01;Name=MsG0480020196.01.T01;_AED=0.14;_eAED=0.14;_QI=0|0|0|1|0|0|2|0|244
Chr4 exon 36096631 36097158 36096631 ID=MsG0480020196.01.T01:exon:7450;Parent=MsG0480020196.01.T01
Chr4 exon 36097217 36097423 36097217 ID=MsG0480020196.01.T01:exon:7449;Parent=MsG0480020196.01.T01
Chr4 CDS 36096631 36097158 36096631 ID=MsG0480020196.01.T01:cds;Parent=MsG0480020196.01.T01
Chr4 CDS 36097217 36097423 36097217 ID=MsG0480020196.01.T01:cds;Parent=MsG0480020196.01.T01
Gene Sequence

>MsG0480020196.01.T01

ATGTACTCACTATTGCATCGTTTTATTTCAGGTCTTTCAAGGTGTGGGAAGAGTTGTAGATTGAGATGGATGAATTATCTAAGACCTAATATCAAAAGAGGAAACTTCACTCAACAAGAAGAGGAGTTGATTATCCGAATGCATAAAAAGCTTGGGAATAGATGGTCATCCATTGCGGCCGAGTTACCTGGAAGAACAGATAATGAAGTGAAGAACTATTGGCATACTTCCCTAAAGAAGAGAGTTGATCACAACGAAATCACAAATATTGAAGAAACCAAATCAAAAGACATTGAATCCACAAAAGATAGGGATATTTCCTTTCACCAAGTTACTCATTCGGCTAGTCTCCAAACCTCAGACATCACTGGTCCATTATCCCCACTTTCATCATCTAGTGAATTCTCTTCCACAGATTATTCAGATCACAGTACCACTTATGAGGATGATTTTGGTTTTCTAGATGGATTAATAGAAGACGTGGATGAAAGATTTTGGGATGACCTTTCCGACACACCAAGTGGAATATGTCCAAATCATTCATTCGATGAAAGTTTTGTTTTGGATAATGATTTTGGAAGCTTTGTAGATACATACAACGAGTCAACAATTGATAGTTTTTGGACACAATCATATGAAGCTGACATGCACCAAGTTCCAAGCCAATTGCTGACACCTTTGCCGATGGAATCTGAATATTTTTCTATAGTATATGATGAGGATATTTGGAGTTGA

Protein sequence

>MsG0480020196.01.T01

MYSLLHRFISGLSRCGKSCRLRWMNYLRPNIKRGNFTQQEEELIIRMHKKLGNRWSSIAAELPGRTDNEVKNYWHTSLKKRVDHNEITNIEETKSKDIESTKDRDISFHQVTHSASLQTSDITGPLSPLSSSSEFSSTDYSDHSTTYEDDFGFLDGLIEDVDERFWDDLSDTPSGICPNHSFDESFVLDNDFGSFVDTYNESTIDSFWTQSYEADMHQVPSQLLTPLPMESEYFSIVYDEDIWS*