AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480019034.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019034.01.T01 MTR_4g022430 96.682 422 14 0 1 422 1 422 0.0 838
MsG0480019034.01.T01 MTR_1g047210 75.701 428 97 2 1 421 1 428 0.0 642
MsG0480019034.01.T01 MTR_4g134090 37.215 395 215 11 45 421 7 386 1.92e-64 214
MsG0480019034.01.T01 MTR_4g134090 36.616 396 220 9 43 421 12 393 2.87e-64 214
MsG0480019034.01.T01 MTR_5g098310 37.105 380 210 11 45 407 16 383 3.40e-60 202
MsG0480019034.01.T01 MTR_0449s0040 35.072 345 195 11 45 372 16 348 5.46e-45 160
MsG0480019034.01.T01 MTR_4g134090 33.205 259 142 10 45 285 7 252 1.17e-22 98.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019034.01.T01 AT2G33150 76.815 427 93 1 1 421 1 427 0.0 664
MsG0480019034.01.T01 AT1G04710 75.829 422 100 1 1 422 1 420 0.0 644
MsG0480019034.01.T01 AT5G48880 71.729 428 114 3 1 421 1 428 0.0 636
MsG0480019034.01.T01 AT5G48880 71.729 428 114 3 1 421 1 428 0.0 636
MsG0480019034.01.T01 AT5G48880 71.729 428 114 3 1 421 1 428 0.0 636
MsG0480019034.01.T01 AT5G48880 76.316 380 88 1 44 421 6 385 0.0 613
MsG0480019034.01.T01 AT5G48230 38.903 383 203 11 43 407 5 374 4.08e-66 218
MsG0480019034.01.T01 AT5G48230 38.845 381 202 11 45 407 12 379 3.14e-65 216
MsG0480019034.01.T01 AT5G47720 36.224 392 223 11 45 421 21 400 3.44e-63 211
MsG0480019034.01.T01 AT5G47720 36.224 392 223 11 45 421 14 393 4.25e-63 210
MsG0480019034.01.T01 AT5G47720 36.224 392 223 11 45 421 14 393 4.25e-63 210
MsG0480019034.01.T01 AT5G47720 36.224 392 223 11 45 421 14 393 4.84e-63 210
MsG0480019034.01.T01 AT5G47720 36.224 392 223 11 45 421 14 393 4.84e-63 210

Find 111 sgRNAs with CRISPR-Local

Find 323 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCAATAAATTTCGTTGTTT+TGG 0.138567 4:-13607672 MsG0480019034.01.T01:three_prime_UTR
TAAGATGAAGCAACTGAATT+TGG 0.179478 4:+13613394 None:intergenic
AGAATTTGTGGAAGTTTAAA+TGG 0.231877 4:-13607950 MsG0480019034.01.T01:CDS
GTTTATTCCTGCAAGATATT+GGG 0.237687 4:-13608697 MsG0480019034.01.T01:CDS
TGTTTATTCCTGCAAGATAT+TGG 0.264378 4:-13608698 MsG0480019034.01.T01:CDS
TTCCTATTCTTGGAATCTTC+AGG 0.284215 4:-13609778 MsG0480019034.01.T01:intron
CCATTGACATTGACCCTTGT+TGG 0.285683 4:+13608667 None:intergenic
AATGGTGGTGCCATGGCTTT+TGG 0.285762 4:-13608649 MsG0480019034.01.T01:CDS
AAGACAAATACTAGAAAATA+TGG 0.292769 4:-13613461 MsG0480019034.01.T01:exon
ATGACACAAGATAGTATTTC+GGG 0.297886 4:-13611213 MsG0480019034.01.T01:CDS
CAAAAGGGGCTTCCTATTCT+TGG 0.305562 4:-13609788 MsG0480019034.01.T01:CDS
TATCCGACCAAACACAAATT+TGG 0.330622 4:-13610064 MsG0480019034.01.T01:CDS
TCTTATTTGATGAAGGAATT+GGG 0.337864 4:-13611251 MsG0480019034.01.T01:intron
TCAATTGCTCTTTCTGATCC+TGG 0.360216 4:+13611744 None:intergenic
ACAGCAAAAGAAATGGAATA+AGG 0.362967 4:+13608102 None:intergenic
TATGACACAAGATAGTATTT+CGG 0.364038 4:-13611214 MsG0480019034.01.T01:CDS
GCCGCAGCTGCAACAGCATC+TGG 0.368332 4:-13610254 MsG0480019034.01.T01:CDS
GCTGAAGCCTGCATTCAAAA+AGG 0.374024 4:-13610028 MsG0480019034.01.T01:CDS
GAACCCACCTTTGTAGAAAC+TGG 0.377832 4:+13610209 None:intergenic
TGAAGGAATTGGGGCTGGAT+TGG 0.386923 4:-13611241 MsG0480019034.01.T01:intron
AGATCTACCAAATTTGTGTT+TGG 0.390275 4:+13610057 None:intergenic
AAGTTTGTGGATCCTAAAAC+TGG 0.399124 4:-13610123 MsG0480019034.01.T01:CDS
ATCAAGCCCCAATATCTTGC+AGG 0.411609 4:+13608690 None:intergenic
CGTGGAAAGGATTGTCGCTT+TGG 0.413346 4:-13608162 MsG0480019034.01.T01:CDS
GTCTACTACAGCAAAAGAAA+TGG 0.423701 4:+13608095 None:intergenic
TGGTGTAGATCCTGCTGTCA+TGG 0.432233 4:-13608912 MsG0480019034.01.T01:CDS
TGGATTCAAGGATACTCTTC+CGG 0.432787 4:-13612547 MsG0480019034.01.T01:CDS
GGGAGACTTCTGAGAATTTG+TGG 0.434584 4:-13607962 MsG0480019034.01.T01:CDS
AGCAAAGCGCGGTGGATTCA+AGG 0.437657 4:-13612559 MsG0480019034.01.T01:CDS
TCACAAGTATGCTTGATCTC+TGG 0.439176 4:-13607904 MsG0480019034.01.T01:exon
ATCAGCAACCGCTTGAAGTC+CGG 0.443411 4:+13611385 None:intergenic
TACATTTCAGGTTCTGGTAT+GGG 0.444350 4:-13608006 MsG0480019034.01.T01:intron
CTGCTGCACCATCACTAACT+TGG 0.445534 4:+13609843 None:intergenic
AAAGCTGGGTTCTATGACAT+TGG 0.454280 4:-13611347 MsG0480019034.01.T01:intron
CCAGCAGATTTCACTGCAGC+TGG 0.456335 4:+13608866 None:intergenic
TTCTTGATTACCTGCAGTTG+TGG 0.457288 4:+13609999 None:intergenic
GAAGTAGGCGACATAGTTGT+AGG 0.467982 4:-13611780 MsG0480019034.01.T01:CDS
ATACATTTCAGGTTCTGGTA+TGG 0.474139 4:-13608007 MsG0480019034.01.T01:intron
GAGAAGTGTGGCTGTGCAAA+AGG 0.475032 4:-13609804 MsG0480019034.01.T01:CDS
GAGAATGTTGCACAGCGTTA+CGG 0.482335 4:-13610407 MsG0480019034.01.T01:CDS
ACCAGATGCTGTTGCAGCTG+CGG 0.484759 4:+13610253 None:intergenic
TTTATTCCTGCAAGATATTG+GGG 0.485109 4:-13608696 MsG0480019034.01.T01:CDS
ATGAAATAAGTATAATAGAA+AGG 0.486695 4:-13607839 MsG0480019034.01.T01:three_prime_UTR
TTTGATGAAGGAATTGGGGC+TGG 0.488144 4:-13611246 MsG0480019034.01.T01:intron
ATGATGAATGATATAGAAAG+TGG 0.488529 4:+13613519 None:intergenic
TACCTGAAGATTCCAAGAAT+AGG 0.490721 4:+13609776 None:intergenic
GATCCTGCTGTCATGGGTGT+TGG 0.497368 4:-13608905 MsG0480019034.01.T01:CDS
GTCAATAGACAATGTTCGTC+CGG 0.498701 4:-13611404 MsG0480019034.01.T01:CDS
ACTTTACCTGTGGCACCTAA+AGG 0.506215 4:+13608622 None:intergenic
GGACATCCTTTAGGTGCCAC+AGG 0.509498 4:-13608628 MsG0480019034.01.T01:intron
GTTGCTGCTTACATAAAAGC+TGG 0.510537 4:-13611362 MsG0480019034.01.T01:CDS
CATGGGAAGAAGACAGTCTC+GGG 0.513815 4:+13610442 None:intergenic
CTACCAAATTTGTGTTTGGT+CGG 0.515258 4:+13610061 None:intergenic
CTTATTTGATGAAGGAATTG+GGG 0.515706 4:-13611250 MsG0480019034.01.T01:intron
GGTGTAATCTCGATGTGTAT+AGG 0.516266 4:-13608141 MsG0480019034.01.T01:CDS
CCGAGACTGTCTTCTTCCCA+TGG 0.519422 4:-13610441 MsG0480019034.01.T01:CDS
CCAACAAGGGTCAATGTCAA+TGG 0.520725 4:-13608667 MsG0480019034.01.T01:CDS
AGCTGCGGCAGTATTTGAAA+GGG 0.523584 4:-13607983 MsG0480019034.01.T01:CDS
AGAAGTGTGGCTGTGCAAAA+GGG 0.526828 4:-13609803 MsG0480019034.01.T01:CDS
GGTGTAGATCCTGCTGTCAT+GGG 0.527409 4:-13608911 MsG0480019034.01.T01:CDS
ACTGAGGCAAGTAGATCATC+CGG 0.530414 4:+13612528 None:intergenic
ATTTCATGCTTACAGCAGCC+TGG 0.533043 4:+13610363 None:intergenic
GCAGCTGGAATAGCAAAAGC+TGG 0.539208 4:+13608881 None:intergenic
ATGTTCGTCCGGACTTCAAG+CGG 0.541193 4:-13611393 MsG0480019034.01.T01:CDS
CCAGCTGCAGTGAAATCTGC+TGG 0.541500 4:-13608866 MsG0480019034.01.T01:CDS
TGTTCTGCTGGACAAACTGG+TGG 0.541501 4:-13613255 MsG0480019034.01.T01:CDS
TTCTCAGAAGTTATTCCCAT+GGG 0.541551 4:+13610425 None:intergenic
CAATGTCAATGGTGGTGCCA+TGG 0.542008 4:-13608656 MsG0480019034.01.T01:CDS
GAGCTGCGGCAGTATTTGAA+AGG 0.546535 4:-13607984 MsG0480019034.01.T01:CDS
TGAGATGAAGCGCCGTGGAA+AGG 0.550315 4:-13608175 MsG0480019034.01.T01:CDS
TTGCTGCTTACATAAAAGCT+GGG 0.552144 4:-13611361 MsG0480019034.01.T01:CDS
GAAATTAGGTCGAGTCTCAC+AGG 0.560910 4:-13610280 MsG0480019034.01.T01:intron
GGACCAACACCCATGACAGC+AGG 0.561197 4:+13608902 None:intergenic
CCATGGGAAGAAGACAGTCT+CGG 0.563244 4:+13610441 None:intergenic
ACTCCTAGAAAAGCTACAGA+TGG 0.565296 4:+13607726 None:intergenic
GACAAGGCAGGAGCAAGACC+AGG 0.566383 4:-13610381 MsG0480019034.01.T01:CDS
ACTATGTCGCCTACTTCACT+TGG 0.567748 4:+13611786 None:intergenic
AATGTGGAACCAAGTGAAGT+AGG 0.571979 4:-13611795 MsG0480019034.01.T01:CDS
AAGGATGGAACCACAACTGC+AGG 0.572568 4:-13610009 MsG0480019034.01.T01:intron
ATTCTCAGAAGTTATTCCCA+TGG 0.590873 4:+13610424 None:intergenic
CGAGACTGTCTTCTTCCCAT+GGG 0.594928 4:-13610440 MsG0480019034.01.T01:CDS
AATCATTCCAGTTTCTACAA+AGG 0.595392 4:-13610216 MsG0480019034.01.T01:intron
GAAGTGTGGCTGTGCAAAAG+GGG 0.597419 4:-13609802 MsG0480019034.01.T01:CDS
AAGAGCAATTGAGTGCAGAA+TGG 0.597887 4:-13611733 MsG0480019034.01.T01:CDS
TCTACTTGCCTCAGTTCTCA+AGG 0.598314 4:-13612520 MsG0480019034.01.T01:intron
GCGTTACGGTGTGACAAGGC+AGG 0.598535 4:-13610393 MsG0480019034.01.T01:CDS
TGACTTGTATGAAATAAATG+AGG 0.599911 4:-13608825 MsG0480019034.01.T01:intron
CACAGCGTTACGGTGTGACA+AGG 0.607695 4:-13610397 MsG0480019034.01.T01:CDS
AGGTTCTGGTATGGGAGCTG+CGG 0.612004 4:-13607998 MsG0480019034.01.T01:CDS
ATTACTGTTTCTGTTGACGA+TGG 0.615568 4:-13610087 MsG0480019034.01.T01:CDS
TATTGGGGCTTGATCCAACA+AGG 0.616877 4:-13608681 MsG0480019034.01.T01:CDS
TAAAGGATGTCCAAAAGCCA+TGG 0.623221 4:+13608639 None:intergenic
AGAAAATTGAGTAAACGCGA+TGG 0.624476 4:+13613554 None:intergenic
ATTTGCAAAGCAAAGCGCGG+TGG 0.632862 4:-13612567 MsG0480019034.01.T01:CDS
AATGCTAGCCAAGTTAGTGA+TGG 0.641945 4:-13609851 MsG0480019034.01.T01:CDS
GACACAAGATAGTATTTCGG+GGG 0.646224 4:-13611211 MsG0480019034.01.T01:CDS
ACAAGGGTCAATGTCAATGG+TGG 0.655513 4:-13608664 MsG0480019034.01.T01:CDS
CGTGATAGAGAAAACAAATG+TGG 0.657771 4:-13611811 MsG0480019034.01.T01:CDS
TGTGGATCCTAAAACTGGAG+AGG 0.664054 4:-13610118 MsG0480019034.01.T01:CDS
CAAAGCGACAATCCTTTCCA+CGG 0.667560 4:+13608163 None:intergenic
GGTTCGCAAAACTAACCCAA+AGG 0.669027 4:-13611190 MsG0480019034.01.T01:intron
GCTATTTGCAAAGCAAAGCG+CGG 0.674582 4:-13612570 MsG0480019034.01.T01:CDS
GCTGCGGCAGTATTTGAAAG+GGG 0.675279 4:-13607982 MsG0480019034.01.T01:CDS
TTGAATGAGATGAAGCGCCG+TGG 0.683165 4:-13608180 MsG0480019034.01.T01:CDS
AGTAGTTACCTTGAGAACTG+AGG 0.691252 4:+13612512 None:intergenic
AAAACTTACAGAGAGATGAG+TGG 0.693438 4:+13613366 None:intergenic
TGTCTATTGACAGTTCGAAG+CGG 0.694158 4:+13611416 None:intergenic
GCTTCTCATGAAGAGAAGTG+TGG 0.695464 4:-13609816 MsG0480019034.01.T01:CDS
TGGTGGATCTGAAAATGATG+TGG 0.696807 4:-13613238 MsG0480019034.01.T01:CDS
TGACACAAGATAGTATTTCG+GGG 0.700265 4:-13611212 MsG0480019034.01.T01:CDS
ATTGGGGCTTGATCCAACAA+GGG 0.745683 4:-13608680 MsG0480019034.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGTAAAAAAAATAATTCAA+AGG + Chr4:13610748-13610767 None:intergenic 10.0%
!! TAAATATAAACTTATAAAAC+AGG - Chr4:13612000-13612019 MsG0480019034.01.T01:intron 10.0%
!! TAATATTATTAATCATATAC+GGG - Chr4:13612113-13612132 MsG0480019034.01.T01:intron 10.0%
!! TTATAATAAATTTGAAAATG+TGG + Chr4:13610507-13610526 None:intergenic 10.0%
!!! AACTTTTTCATTATTTTAAT+AGG - Chr4:13610773-13610792 MsG0480019034.01.T01:intron 10.0%
!!! ATAATACTACAAATTTTAAA+AGG + Chr4:13611091-13611110 None:intergenic 10.0%
!!! TAATACTACAAATTTTAAAA+GGG + Chr4:13611090-13611109 None:intergenic 10.0%
!! AAATAATGATATGAGTAATT+TGG - Chr4:13611504-13611523 MsG0480019034.01.T01:intron 15.0%
!! AACTTATCAACAATAAAAAA+TGG - Chr4:13609346-13609365 MsG0480019034.01.T01:intron 15.0%
!! AATCTATGAAAAGATTATAA+AGG - Chr4:13610937-13610956 MsG0480019034.01.T01:intron 15.0%
!! ATGAAATAAGTATAATAGAA+AGG - Chr4:13613417-13613436 MsG0480019034.01.T01:CDS 15.0%
!! ATTTGTGTAATATTTACAAT+AGG + Chr4:13612054-13612073 None:intergenic 15.0%
!! TTGTAAATATTACACAAATT+TGG - Chr4:13612055-13612074 MsG0480019034.01.T01:intron 15.0%
!! TTGTAATTCTAATACATTTA+GGG - Chr4:13611689-13611708 MsG0480019034.01.T01:intron 15.0%
!! TTTGTAATTCTAATACATTT+AGG - Chr4:13611688-13611707 MsG0480019034.01.T01:intron 15.0%
!!! AATTCTTTTAATGTGAAATT+AGG - Chr4:13610962-13610981 MsG0480019034.01.T01:intron 15.0%
!!! ACTATGTTTTCAAATTTTTA+AGG - Chr4:13608605-13608624 MsG0480019034.01.T01:intron 15.0%
!!! CTATGTTTTCAAATTTTTAA+GGG - Chr4:13608606-13608625 MsG0480019034.01.T01:intron 15.0%
!!! TAAATTATTTTCATGTAAGT+AGG + Chr4:13610483-13610502 None:intergenic 15.0%
!!! TTTTTCTTTTGCTTATTTTT+CGG - Chr4:13611282-13611301 MsG0480019034.01.T01:intron 15.0%
!! AAAATTGTTCCTAATTAGAT+AGG - Chr4:13612228-13612247 MsG0480019034.01.T01:intron 20.0%
!! AACTAGAGATAATGAAATTT+CGG + Chr4:13612729-13612748 None:intergenic 20.0%
!! AAGACAAATACTAGAAAATA+TGG - Chr4:13607795-13607814 MsG0480019034.01.T01:three_prime_UTR 20.0%
!! ACATAGTAAACAAAAACAAT+AGG + Chr4:13608592-13608611 None:intergenic 20.0%
!! ACTTCATAAATAGATATTGA+AGG - Chr4:13608373-13608392 MsG0480019034.01.T01:intron 20.0%
!! AGAAAACTTTATTACAATCT+AGG + Chr4:13610678-13610697 None:intergenic 20.0%
!! ATAATTCAAAGGAAAATATG+TGG + Chr4:13610737-13610756 None:intergenic 20.0%
!! GAAAGGAAAAAAAATAATGA+AGG - Chr4:13613434-13613453 MsG0480019034.01.T01:CDS 20.0%
!! GTACACTAAAATATTAAGAA+AGG - Chr4:13612896-13612915 MsG0480019034.01.T01:intron 20.0%
!! TTAATACAAAAAGATTCTCA+AGG - Chr4:13608996-13609015 MsG0480019034.01.T01:intron 20.0%
!! TTATGACTAAATTTATGACA+CGG + Chr4:13611733-13611752 None:intergenic 20.0%
!!! AGTATTTTACTTGTGTTTTT+AGG - Chr4:13610340-13610359 MsG0480019034.01.T01:intron 20.0%
!!! ATCAATAAATTTCGTTGTTT+TGG - Chr4:13613584-13613603 MsG0480019034.01.T01:five_prime_UTR 20.0%
!!! CATTTTGTTTATAAAGTTTG+TGG - Chr4:13611120-13611139 MsG0480019034.01.T01:intron 20.0%
!!! TAATATTTTAGTGTACTCTT+TGG + Chr4:13612892-13612911 None:intergenic 20.0%
!!! TTATTTGTTTTTGTTTGAAC+CGG - Chr4:13608952-13608971 MsG0480019034.01.T01:intron 20.0%
!!! TTCAATTTTTACTTCATTTG+TGG + Chr4:13612793-13612812 None:intergenic 20.0%
!!! TTCACAGTTTTTAAATTTGA+AGG + Chr4:13612296-13612315 None:intergenic 20.0%
!!! TTTTGTTAGTAATCATTTCA+TGG + Chr4:13611650-13611669 None:intergenic 20.0%
! AACTAAAGAGGTTATTTATC+AGG + Chr4:13610118-13610137 None:intergenic 25.0%
! AATAAAAGGACTAAGGAATT+AGG - Chr4:13611954-13611973 MsG0480019034.01.T01:intron 25.0%
! AATGTGAATCAAATAGACTA+TGG - Chr4:13610154-13610173 MsG0480019034.01.T01:intron 25.0%
! ACTTTATGTTGCTATGATAA+AGG - Chr4:13612151-13612170 MsG0480019034.01.T01:intron 25.0%
! AGAATTTGTGGAAGTTTAAA+TGG - Chr4:13613306-13613325 MsG0480019034.01.T01:intron 25.0%
! AGATAACTAACTAACTAAAG+AGG + Chr4:13610130-13610149 None:intergenic 25.0%
! ATAACAGGATTTATCAATTG+TGG - Chr4:13609069-13609088 MsG0480019034.01.T01:intron 25.0%
! ATAAGCTGTGTTAAGTTAAA+TGG + Chr4:13610570-13610589 None:intergenic 25.0%
! ATGATGAATGATATAGAAAG+TGG + Chr4:13607740-13607759 None:intergenic 25.0%
! ATTAAATCAATCTGTTCAAC+TGG + Chr4:13612996-13613015 None:intergenic 25.0%
! ATTAATATTGAAGACGTATC+TGG - Chr4:13608062-13608081 MsG0480019034.01.T01:intron 25.0%
! CAACTACTACATAAGAAAAA+TGG - Chr4:13609032-13609051 MsG0480019034.01.T01:intron 25.0%
! CAGCTTATGAATAATAGATA+AGG - Chr4:13610582-13610601 MsG0480019034.01.T01:intron 25.0%
! CTGCTTCTATAGTATAAATT+AGG + Chr4:13611884-13611903 None:intergenic 25.0%
! CTTATGAATAATAGATAAGG+AGG - Chr4:13610585-13610604 MsG0480019034.01.T01:intron 25.0%
! GATTAGTGAACATTTATAAC+AGG - Chr4:13609054-13609073 MsG0480019034.01.T01:intron 25.0%
! GTTTAATAAGAAGACATTGA+GGG + Chr4:13612870-13612889 None:intergenic 25.0%
! TAAACAAAAACAATAGGTTC+AGG + Chr4:13608586-13608605 None:intergenic 25.0%
! TAAACAATATGCATGTTTCT+AGG + Chr4:13612924-13612943 None:intergenic 25.0%
! TACATTCAGGTACTAATAAT+TGG + Chr4:13613214-13613233 None:intergenic 25.0%
! TATGACACAAGATAGTATTT+CGG - Chr4:13610042-13610061 MsG0480019034.01.T01:CDS 25.0%
! TATTTATAAATGTACTTCCC+AGG + Chr4:13611982-13612001 None:intergenic 25.0%
! TCTAACTATATTTAACTGCA+GGG - Chr4:13611382-13611401 MsG0480019034.01.T01:CDS 25.0%
! TGCAGTTAAATATAGTTAGA+GGG + Chr4:13611382-13611401 None:intergenic 25.0%
! TGGAAATCAGAGAAAATAAA+AGG - Chr4:13611940-13611959 MsG0480019034.01.T01:intron 25.0%
! TTTGATTACTATTAGTCAAC+TGG - Chr4:13608766-13608785 MsG0480019034.01.T01:intron 25.0%
! TTTGTACTGTTATACATTTC+AGG - Chr4:13613238-13613257 MsG0480019034.01.T01:CDS 25.0%
!! ACAAGCACATGATATTTTAT+TGG - Chr4:13609606-13609625 MsG0480019034.01.T01:intron 25.0%
!! ATATATCATGTGCATGTTTT+TGG + Chr4:13609689-13609708 None:intergenic 25.0%
!! ATCTTTTTGTATTAACCAAC+TGG + Chr4:13608991-13609010 None:intergenic 25.0%
!! CATTTTTCTTATGTAGTAGT+TGG + Chr4:13609034-13609053 None:intergenic 25.0%
!! CTAAGCATTTATCAATTTTG+TGG - Chr4:13612508-13612527 MsG0480019034.01.T01:intron 25.0%
!! TCTTATTTGATGAAGGAATT+GGG - Chr4:13610005-13610024 MsG0480019034.01.T01:intron 25.0%
!! TGACTTGTATGAAATAAATG+AGG - Chr4:13612431-13612450 MsG0480019034.01.T01:intron 25.0%
!! TGCTATATTCTTTTTATCAG+TGG + Chr4:13612687-13612706 None:intergenic 25.0%
!!! AAGAGTTTTAGAAAGTAAAC+AGG - Chr4:13612813-13612832 MsG0480019034.01.T01:intron 25.0%
!!! TATGAAGAACTTTTGAAATG+AGG + Chr4:13610440-13610459 None:intergenic 25.0%
!!! TGTTTTTGGATGAATTAAAG+CGG + Chr4:13609675-13609694 None:intergenic 25.0%
!!! TTTTAAAAGGGAATTCATCT+TGG + Chr4:13611078-13611097 None:intergenic 25.0%
AAACGATTGATCATGTAGTT+TGG + Chr4:13608912-13608931 None:intergenic 30.0%
AAACGTAGGATTTACTTTAG+TGG - Chr4:13609217-13609236 MsG0480019034.01.T01:intron 30.0%
AAATACTAAAATACCCCCAT+CGG + Chr4:13610327-13610346 None:intergenic 30.0%
AAATAGACTATGGTTGTGTT+TGG - Chr4:13610164-13610183 MsG0480019034.01.T01:intron 30.0%
AACAACAAAGTGGTTGTTAT+AGG + Chr4:13608870-13608889 None:intergenic 30.0%
AACTGTGAATTCAATGTTGT+AGG - Chr4:13612307-13612326 MsG0480019034.01.T01:intron 30.0%
AAGGAATGCAATCTACATAT+GGG + Chr4:13611341-13611360 None:intergenic 30.0%
AAGTTCCATCATAATCCAAA+TGG + Chr4:13609331-13609350 None:intergenic 30.0%
AATCATTCCAGTTTCTACAA+AGG - Chr4:13611040-13611059 MsG0480019034.01.T01:intron 30.0%
AATGTGCAATAGAAAGTTGT+TGG + Chr4:13612486-13612505 None:intergenic 30.0%
ACAGCAAAAGAAATGGAATA+AGG + Chr4:13613157-13613176 None:intergenic 30.0%
ACTTTCATTCGCGTTAAATT+GGG - Chr4:13611847-13611866 MsG0480019034.01.T01:intron 30.0%
AGATCTACCAAATTTGTGTT+TGG + Chr4:13611202-13611221 None:intergenic 30.0%
ATAGATATTGAAGGAGAGTT+TGG - Chr4:13608382-13608401 MsG0480019034.01.T01:intron 30.0%
ATGACACAAGATAGTATTTC+GGG - Chr4:13610043-13610062 MsG0480019034.01.T01:CDS 30.0%
ATGCAACTTAAATGTACCTT+TGG + Chr4:13610085-13610104 None:intergenic 30.0%
CAAATAAGAGGAAGAAGATT+AGG + Chr4:13609994-13610013 None:intergenic 30.0%
CAATTCCTTCATCAAATAAG+AGG + Chr4:13610006-13610025 None:intergenic 30.0%
CAGAGAAAATAAAAGGACTA+AGG - Chr4:13611947-13611966 MsG0480019034.01.T01:intron 30.0%
CTAATTAGATAGGAAAAGCT+CGG - Chr4:13612238-13612257 MsG0480019034.01.T01:intron 30.0%
CTAGATTATGCACATCTAAT+TGG - Chr4:13611920-13611939 MsG0480019034.01.T01:intron 30.0%
CTCTAACTATATTTAACTGC+AGG - Chr4:13611381-13611400 MsG0480019034.01.T01:CDS 30.0%
CTGCAGTTAAATATAGTTAG+AGG + Chr4:13611383-13611402 None:intergenic 30.0%
CTTATTTGATGAAGGAATTG+GGG - Chr4:13610006-13610025 MsG0480019034.01.T01:intron 30.0%
GCAGTTAAATATAGTTAGAG+GGG + Chr4:13611381-13611400 None:intergenic 30.0%
GCTCATGAATAAGAAATCAT+AGG + Chr4:13609414-13609433 None:intergenic 30.0%
GGAAAATATGTGGAATTGAT+AGG + Chr4:13610727-13610746 None:intergenic 30.0%
GGTTTAATAAGAAGACATTG+AGG + Chr4:13612871-13612890 None:intergenic 30.0%
GTTTATTCCTGCAAGATATT+GGG - Chr4:13612559-13612578 MsG0480019034.01.T01:CDS 30.0%
TAAGATGAAGCAACTGAATT+TGG + Chr4:13607865-13607884 None:intergenic 30.0%
TAAGGAATGCAATCTACATA+TGG + Chr4:13611342-13611361 None:intergenic 30.0%
TAGACTCTATTTACATGTCA+TGG - Chr4:13609952-13609971 MsG0480019034.01.T01:intron 30.0%
TGCAACTTAAATGTACCTTT+GGG + Chr4:13610084-13610103 None:intergenic 30.0%
TGTTTATTCCTGCAAGATAT+TGG - Chr4:13612558-13612577 MsG0480019034.01.T01:CDS 30.0%
TGTTTGGATTAACTGTGATT+GGG - Chr4:13610180-13610199 MsG0480019034.01.T01:intron 30.0%
TTAGTGTACAAAAACCTCAA+AGG + Chr4:13613556-13613575 None:intergenic 30.0%
TTCTAATACATTTAGGGACA+TGG - Chr4:13611695-13611714 MsG0480019034.01.T01:intron 30.0%
TTGAACATAACTACATGTGT+TGG + Chr4:13608274-13608293 None:intergenic 30.0%
TTTATTCCTGCAAGATATTG+GGG - Chr4:13612560-13612579 MsG0480019034.01.T01:CDS 30.0%
! AAAGTAAATCCTACGTTTTG+AGG + Chr4:13609215-13609234 None:intergenic 30.0%
! CAAAATATCTAGAGTCCATT+TGG - Chr4:13609313-13609332 MsG0480019034.01.T01:intron 30.0%
! CAAATGTGTCTTTTGTTAGT+AGG - Chr4:13611618-13611637 MsG0480019034.01.T01:intron 30.0%
! CTCTTATTTGATGAAGGAAT+TGG - Chr4:13610004-13610023 MsG0480019034.01.T01:intron 30.0%
! CTTACATGTCTTTTATTGTC+AGG - Chr4:13613031-13613050 MsG0480019034.01.T01:intron 30.0%
! TTCTTCCTCTTATTTGATGA+AGG - Chr4:13609998-13610017 MsG0480019034.01.T01:intron 30.0%
!! AATGTGTCATTTGAGGAAAA+CGG - Chr4:13609242-13609261 MsG0480019034.01.T01:intron 30.0%
!! CACATTTGTTTTCTCTATCA+CGG + Chr4:13609447-13609466 None:intergenic 30.0%
!!! TAGTTTTGTTTTTCACTTGC+AGG - Chr4:13607970-13607989 MsG0480019034.01.T01:CDS 30.0%
!!! TTGGTTTATTTTTGCTCCTT+AGG + Chr4:13613195-13613214 None:intergenic 30.0%
AAAACAGGCATCTAGATGTA+GGG - Chr4:13612015-13612034 MsG0480019034.01.T01:intron 35.0%
AAAACTTACAGAGAGATGAG+TGG + Chr4:13607893-13607912 None:intergenic 35.0%
AAGTCAGAAAAGCAATTGTC+TGG - Chr4:13610372-13610391 MsG0480019034.01.T01:intron 35.0%
AAGTTTGTGGATCCTAAAAC+TGG - Chr4:13611133-13611152 MsG0480019034.01.T01:intron 35.0%
AGAAAATTGAGTAAACGCGA+TGG + Chr4:13607705-13607724 None:intergenic 35.0%
AGAGACTGTAAAACTAACCT+GGG + Chr4:13609568-13609587 None:intergenic 35.0%
AGAGTCCATTTGGATTATGA+TGG - Chr4:13609323-13609342 MsG0480019034.01.T01:intron 35.0%
AGGATTTATCAATTGTGGCT+GGG - Chr4:13609074-13609093 MsG0480019034.01.T01:intron 35.0%
AGTCAGAAAAGCAATTGTCT+GGG - Chr4:13610373-13610392 MsG0480019034.01.T01:intron 35.0%
ATTACTCATACGTCATAGCA+TGG - Chr4:13609114-13609133 MsG0480019034.01.T01:intron 35.0%
ATTCCAGTTTCTACAAAGGT+GGG - Chr4:13611044-13611063 MsG0480019034.01.T01:intron 35.0%
ATTCTCAGAAGTTATTCCCA+TGG + Chr4:13610835-13610854 None:intergenic 35.0%
CAATTTAACGCGAATGAAAG+TGG + Chr4:13611848-13611867 None:intergenic 35.0%
CACTTTCATTCGCGTTAAAT+TGG - Chr4:13611846-13611865 MsG0480019034.01.T01:intron 35.0%
CAGTACAAACTCTTACATTC+AGG + Chr4:13613227-13613246 None:intergenic 35.0%
CGTGATAGAGAAAACAAATG+TGG - Chr4:13609445-13609464 MsG0480019034.01.T01:intron 35.0%
CTACCAAATTTGTGTTTGGT+CGG + Chr4:13611198-13611217 None:intergenic 35.0%
GATTAGGCCAAAACATTACA+AGG + Chr4:13609978-13609997 None:intergenic 35.0%
GTCTACTACAGCAAAAGAAA+TGG + Chr4:13613164-13613183 None:intergenic 35.0%
GTGTTTGGATTAACTGTGAT+TGG - Chr4:13610179-13610198 MsG0480019034.01.T01:intron 35.0%
TAAAACAGGCATCTAGATGT+AGG - Chr4:13612014-13612033 MsG0480019034.01.T01:intron 35.0%
TAAATGACCAAAAAACCCAG+CGG - Chr4:13610251-13610270 MsG0480019034.01.T01:CDS 35.0%
TACCTGAAGATTCCAAGAAT+AGG + Chr4:13611483-13611502 None:intergenic 35.0%
TAGAGACTGTAAAACTAACC+TGG + Chr4:13609569-13609588 None:intergenic 35.0%
TAGTAGACTATGTATGCCTA+AGG - Chr4:13613176-13613195 MsG0480019034.01.T01:intron 35.0%
TATCCGACCAAACACAAATT+TGG - Chr4:13611192-13611211 MsG0480019034.01.T01:CDS 35.0%
TGACACAAGATAGTATTTCG+GGG - Chr4:13610044-13610063 MsG0480019034.01.T01:CDS 35.0%
TGACTAAAAAGACACGTTCA+TGG + Chr4:13611597-13611616 None:intergenic 35.0%
TGGCTTATAACTAGGAAAAC+CGG + Chr4:13610290-13610309 None:intergenic 35.0%
TTCAACATGTGTGTCTATCT+CGG + Chr4:13608207-13608226 None:intergenic 35.0%
TTCCTATTCTTGGAATCTTC+AGG - Chr4:13611478-13611497 MsG0480019034.01.T01:intron 35.0%
TTCTCAGAAGTTATTCCCAT+GGG + Chr4:13610834-13610853 None:intergenic 35.0%
! ATAGTTGTAGGCACAGTTTT+AGG - Chr4:13609488-13609507 MsG0480019034.01.T01:intron 35.0%
! CGAGCTTTTCCTATCTAATT+AGG + Chr4:13612240-13612259 None:intergenic 35.0%
! GGATTAGTGAGTGTTAACTT+TGG - Chr4:13610606-13610625 MsG0480019034.01.T01:intron 35.0%
! TAAAGTGTTAGTGTCATGTG+CGG - Chr4:13608158-13608177 MsG0480019034.01.T01:CDS 35.0%
! TTGCTGCTTACATAAAAGCT+GGG - Chr4:13609895-13609914 MsG0480019034.01.T01:intron 35.0%
! TTTGGAGAGGAATTTAGAGT+GGG - Chr4:13610630-13610649 MsG0480019034.01.T01:intron 35.0%
! TTTTCCTAGTTATAAGCCAG+CGG - Chr4:13610291-13610310 MsG0480019034.01.T01:intron 35.0%
!! AGTGGTTAATGTGTCATTTG+AGG - Chr4:13609235-13609254 MsG0480019034.01.T01:intron 35.0%
!! ATACATTTCAGGTTCTGGTA+TGG - Chr4:13613249-13613268 MsG0480019034.01.T01:CDS 35.0%
!! ATTACTGTTTCTGTTGACGA+TGG - Chr4:13611169-13611188 MsG0480019034.01.T01:intron 35.0%
!! ATTTAATTAGCTTGTGCCAC+AGG + Chr4:13612084-13612103 None:intergenic 35.0%
!! CTGTTATACATTTCAGGTTC+TGG - Chr4:13613244-13613263 MsG0480019034.01.T01:CDS 35.0%
!! GTGAGTGTTAACTTTGGTTT+TGG - Chr4:13610612-13610631 MsG0480019034.01.T01:intron 35.0%
!! TACATTTCAGGTTCTGGTAT+GGG - Chr4:13613250-13613269 MsG0480019034.01.T01:CDS 35.0%
!! TTTTGGAGAGGAATTTAGAG+TGG - Chr4:13610629-13610648 MsG0480019034.01.T01:intron 35.0%
!!! TCAATTTTGTGGTCTTGTGT+AGG - Chr4:13612519-13612538 MsG0480019034.01.T01:intron 35.0%
!!! TGTTAACTTTGGTTTTGGAG+AGG - Chr4:13610617-13610636 MsG0480019034.01.T01:intron 35.0%
AAAGCTGGGTTCTATGACAT+TGG - Chr4:13609909-13609928 MsG0480019034.01.T01:intron 40.0%
AACTGGTAGAACAGCAAATC+CGG + Chr4:13608974-13608993 None:intergenic 40.0%
AAGAGCAATTGAGTGCAGAA+TGG - Chr4:13609523-13609542 MsG0480019034.01.T01:intron 40.0%
AAGCCTGCATTCAAAAAGGA+TGG - Chr4:13611232-13611251 MsG0480019034.01.T01:CDS 40.0%
AATAGCAGTACGATATGCAC+TGG + Chr4:13608672-13608691 None:intergenic 40.0%
AATGCTAGCCAAGTTAGTGA+TGG - Chr4:13611405-13611424 MsG0480019034.01.T01:CDS 40.0%
AATGTGGAACCAAGTGAAGT+AGG - Chr4:13609461-13609480 MsG0480019034.01.T01:intron 40.0%
ACAACTGCAGGTAATCAAGA+AGG - Chr4:13611259-13611278 MsG0480019034.01.T01:intron 40.0%
ACGTATCGAAACTTTACCTG+TGG + Chr4:13612647-13612666 None:intergenic 40.0%
ACTCCTAGAAAAGCTACAGA+TGG + Chr4:13613533-13613552 None:intergenic 40.0%
AGTAGTTACCTTGAGAACTG+AGG + Chr4:13608747-13608766 None:intergenic 40.0%
CACAGTCTCTGCTTGAAAAT+TGG + Chr4:13609820-13609839 None:intergenic 40.0%
CAGATAACTCCTCAAAACGT+AGG - Chr4:13609179-13609198 MsG0480019034.01.T01:intron 40.0%
CAGGATTTATCAATTGTGGC+TGG - Chr4:13609073-13609092 MsG0480019034.01.T01:intron 40.0%
CATTCCAGTTTCTACAAAGG+TGG - Chr4:13611043-13611062 MsG0480019034.01.T01:intron 40.0%
CTAGTTGTCGTGTTTGTGTT+TGG - Chr4:13608498-13608517 MsG0480019034.01.T01:intron 40.0%
CTTATTCATGAGCTCTCTGT+AGG - Chr4:13609421-13609440 MsG0480019034.01.T01:intron 40.0%
GACACAAGATAGTATTTCGG+GGG - Chr4:13610045-13610064 MsG0480019034.01.T01:CDS 40.0%
GACTAAGGAATTAGGTACCT+GGG - Chr4:13611962-13611981 MsG0480019034.01.T01:intron 40.0%
GAGATAGACACACATGTTGA+AGG - Chr4:13608206-13608225 MsG0480019034.01.T01:CDS 40.0%
GAGGAAAACGGATGTATGTT+TGG - Chr4:13609254-13609273 MsG0480019034.01.T01:intron 40.0%
GGACATATTCACAAGGTGTA+AGG + Chr4:13611360-13611379 None:intergenic 40.0%
GGTGTAATCTCGATGTGTAT+AGG - Chr4:13613115-13613134 MsG0480019034.01.T01:intron 40.0%
GTCAATAGACAATGTTCGTC+CGG - Chr4:13609852-13609871 MsG0480019034.01.T01:CDS 40.0%
TAAACAGAGCACAAGGAACT+TGG + Chr4:13611310-13611329 None:intergenic 40.0%
TAAAGGATGTCCAAAAGCCA+TGG + Chr4:13612620-13612639 None:intergenic 40.0%
TACACAAATTTGGCATCCTG+TGG - Chr4:13612065-13612084 MsG0480019034.01.T01:intron 40.0%
TACTTCATTTGTGGCTCGAA+TGG + Chr4:13612784-13612803 None:intergenic 40.0%
TCAATTGCTCTTTCTGATCC+TGG + Chr4:13609515-13609534 None:intergenic 40.0%
TCACAAGTATGCTTGATCTC+TGG - Chr4:13613352-13613371 MsG0480019034.01.T01:intron 40.0%
TCCAAGTTAAACAGAGCACA+AGG + Chr4:13611317-13611336 None:intergenic 40.0%
TCCTTGTGCTCTGTTTAACT+TGG - Chr4:13611313-13611332 MsG0480019034.01.T01:intron 40.0%
TCTTATGTAGTAGTTGGCAG+TGG + Chr4:13609028-13609047 None:intergenic 40.0%
TGGATTCAAGGATACTCTTC+CGG - Chr4:13608709-13608728 MsG0480019034.01.T01:CDS 40.0%
TGTCTATTGACAGTTCGAAG+CGG + Chr4:13609843-13609862 None:intergenic 40.0%
TTAGAGGGGACATATTCACA+AGG + Chr4:13611367-13611386 None:intergenic 40.0%
TTCTTGATTACCTGCAGTTG+TGG + Chr4:13611260-13611279 None:intergenic 40.0%
! ACACATGTTGAAGGTGTGTA+TGG - Chr4:13608215-13608234 MsG0480019034.01.T01:intron 40.0%
! AGAATGGCTGCATTTTATGC+TGG - Chr4:13609539-13609558 MsG0480019034.01.T01:intron 40.0%
! ATGGCTTTTGGACATCCTTT+AGG - Chr4:13612619-13612638 MsG0480019034.01.T01:intron 40.0%
! ATTTAGAGTGGGAGAGAACT+AGG - Chr4:13610641-13610660 MsG0480019034.01.T01:intron 40.0%
! GTTATCTGTCCTACGTTTTG+AGG + Chr4:13609191-13609210 None:intergenic 40.0%
! GTTCCATCCTTTTTGAATGC+AGG + Chr4:13611238-13611257 None:intergenic 40.0%
! GTTGCTGCTTACATAAAAGC+TGG - Chr4:13609894-13609913 MsG0480019034.01.T01:intron 40.0%
! TCTCCATCTGTAGCTTTTCT+AGG - Chr4:13613527-13613546 MsG0480019034.01.T01:five_prime_UTR 40.0%
! TGGTGGATCTGAAAATGATG+TGG - Chr4:13608018-13608037 MsG0480019034.01.T01:intron 40.0%
! TGTTTCTCCTCTCCAGTTTT+AGG + Chr4:13611148-13611167 None:intergenic 40.0%
! TTTTGTTCTGCTGGACAAAC+TGG - Chr4:13607998-13608017 MsG0480019034.01.T01:CDS 40.0%
!! GTTTGGTGTTCAACACATGT+CGG - Chr4:13608399-13608418 MsG0480019034.01.T01:intron 40.0%
!!! GCAATTGTCTGGGAGTTTTT+TGG - Chr4:13610383-13610402 MsG0480019034.01.T01:CDS 40.0%
!!! GTCATGGCCTTGTAATGTTT+TGG - Chr4:13609968-13609987 MsG0480019034.01.T01:intron 40.0%
ACAAGGGTCAATGTCAATGG+TGG - Chr4:13612592-13612611 MsG0480019034.01.T01:intron 45.0%
ACTATGTCGCCTACTTCACT+TGG + Chr4:13609473-13609492 None:intergenic 45.0%
ACTGAGGCAAGTAGATCATC+CGG + Chr4:13608731-13608750 None:intergenic 45.0%
ACTTTACCTGTGGCACCTAA+AGG + Chr4:13612637-13612656 None:intergenic 45.0%
AGCGGTAGTTAACTACCGAT+GGG - Chr4:13610309-13610328 MsG0480019034.01.T01:intron 45.0%
AGCTGCGGCAGTATTTGAAA+GGG - Chr4:13613273-13613292 MsG0480019034.01.T01:intron 45.0%
ATCAAGCCCCAATATCTTGC+AGG + Chr4:13612569-13612588 None:intergenic 45.0%
ATCCGTGTTTGTGTCTTGTC+TGG - Chr4:13608331-13608350 MsG0480019034.01.T01:intron 45.0%
ATTGGGGCTTGATCCAACAA+GGG - Chr4:13612576-13612595 MsG0480019034.01.T01:CDS 45.0%
ATTTCATGCTTACAGCAGCC+TGG + Chr4:13610896-13610915 None:intergenic 45.0%
CAAAAGGGGCTTCCTATTCT+TGG - Chr4:13611468-13611487 MsG0480019034.01.T01:intron 45.0%
CAAAGCGACAATCCTTTCCA+CGG + Chr4:13613096-13613115 None:intergenic 45.0%
CACCAGACAAGACACAAACA+CGG + Chr4:13608336-13608355 None:intergenic 45.0%
CCAACAAGGGTCAATGTCAA+TGG - Chr4:13612589-13612608 MsG0480019034.01.T01:intron 45.0%
CCATTGACATTGACCCTTGT+TGG + Chr4:13612592-13612611 None:intergenic 45.0%
CCTACGTCTCAACAACAAAG+TGG + Chr4:13608880-13608899 None:intergenic 45.0%
GAAATTAGGTCGAGTCTCAC+AGG - Chr4:13610976-13610995 MsG0480019034.01.T01:intron 45.0%
GAACCCACCTTTGTAGAAAC+TGG + Chr4:13611050-13611069 None:intergenic 45.0%
GAAGTAGGCGACATAGTTGT+AGG - Chr4:13609476-13609495 MsG0480019034.01.T01:intron 45.0%
GAGAATGTTGCACAGCGTTA+CGG - Chr4:13610849-13610868 MsG0480019034.01.T01:intron 45.0%
GCACATTACAGGAAACAAGC+AGG + Chr4:13611817-13611836 None:intergenic 45.0%
GCTATTTGCAAAGCAAAGCG+CGG - Chr4:13608686-13608705 MsG0480019034.01.T01:CDS 45.0%
GCTGAAGCCTGCATTCAAAA+AGG - Chr4:13611228-13611247 MsG0480019034.01.T01:CDS 45.0%
GCTTCTCATGAAGAGAAGTG+TGG - Chr4:13611440-13611459 MsG0480019034.01.T01:intron 45.0%
GGACTAAGGAATTAGGTACC+TGG - Chr4:13611961-13611980 MsG0480019034.01.T01:intron 45.0%
GGTTCGCAAAACTAACCCAA+AGG - Chr4:13610066-13610085 MsG0480019034.01.T01:CDS 45.0%
TATTGGGGCTTGATCCAACA+AGG - Chr4:13612575-13612594 MsG0480019034.01.T01:CDS 45.0%
TCTACTTGCCTCAGTTCTCA+AGG - Chr4:13608736-13608755 MsG0480019034.01.T01:intron 45.0%
TGTGGATCCTAAAACTGGAG+AGG - Chr4:13611138-13611157 MsG0480019034.01.T01:intron 45.0%
TTGTTTCCTGTAATGTGCCC+AGG - Chr4:13611819-13611838 MsG0480019034.01.T01:intron 45.0%
TTTGATGAAGGAATTGGGGC+TGG - Chr4:13610010-13610029 MsG0480019034.01.T01:CDS 45.0%
TTTGTGGCTCGAATGGCATT+TGG + Chr4:13612777-13612796 None:intergenic 45.0%
! AGAAGTGTGGCTGTGCAAAA+GGG - Chr4:13611453-13611472 MsG0480019034.01.T01:intron 45.0%
! CAGGCTTCATTTTGTTCTGC+TGG - Chr4:13607989-13608008 MsG0480019034.01.T01:CDS 45.0%
! GGGAGACTTCTGAGAATTTG+TGG - Chr4:13613294-13613313 MsG0480019034.01.T01:intron 45.0%
! GTTGAAGGTGTGTATGGTGT+TGG - Chr4:13608221-13608240 MsG0480019034.01.T01:intron 45.0%
! TGTAGGAGTTTTGCTGCTGT+TGG - Chr4:13612324-13612343 MsG0480019034.01.T01:intron 45.0%
!! ACTACCGCTGGCTTATAACT+AGG + Chr4:13610298-13610317 None:intergenic 45.0%
!! CCACTTTGTTGTTGAGACGT+AGG - Chr4:13608877-13608896 MsG0480019034.01.T01:CDS 45.0%
!! GCTTTTCTAGGAGTCCTTTG+AGG - Chr4:13613539-13613558 MsG0480019034.01.T01:five_prime_UTR 45.0%
!! GGATTTGCTGTTCTACCAGT+TGG - Chr4:13608973-13608992 MsG0480019034.01.T01:intron 45.0%
!!! GCATTTTATGCTGGTTTCCC+AGG - Chr4:13609548-13609567 MsG0480019034.01.T01:intron 45.0%
!!! TTAACTGCCGCTGGGTTTTT+TGG + Chr4:13610261-13610280 None:intergenic 45.0%
!! ATAATATTATTAATCATATA+CGG - Chr4:13612112-13612131 MsG0480019034.01.T01:intron 5.0%
!! ATAATTCAAAAAAATATATA+TGG + Chr4:13608468-13608487 None:intergenic 5.0%
!! CAAAAAAATAAAAAATAAAA+AGG + Chr4:13608559-13608578 None:intergenic 5.0%
!!! CTTTTTATTTTTTATTTTTT+TGG - Chr4:13608557-13608576 MsG0480019034.01.T01:intron 5.0%
AAGGATGGAACCACAACTGC+AGG - Chr4:13611247-13611266 MsG0480019034.01.T01:intron 50.0%
ATCAGCAACCGCTTGAAGTC+CGG + Chr4:13609874-13609893 None:intergenic 50.0%
ATGTTCGTCCGGACTTCAAG+CGG - Chr4:13609863-13609882 MsG0480019034.01.T01:intron 50.0%
ATTTGCAAAGCAAAGCGCGG+TGG - Chr4:13608689-13608708 MsG0480019034.01.T01:CDS 50.0%
CAGCGGTAGTTAACTACCGA+TGG - Chr4:13610308-13610327 MsG0480019034.01.T01:intron 50.0%
CATCGGTAGTTAACTACCGC+TGG + Chr4:13610310-13610329 None:intergenic 50.0%
CATGGGAAGAAGACAGTCTC+GGG + Chr4:13610817-13610836 None:intergenic 50.0%
CCATGGGAAGAAGACAGTCT+CGG + Chr4:13610818-13610837 None:intergenic 50.0%
CGAGACTGTCTTCTTCCCAT+GGG - Chr4:13610816-13610835 MsG0480019034.01.T01:intron 50.0%
CGGTAGTTAACTACCGATGG+GGG - Chr4:13610311-13610330 MsG0480019034.01.T01:intron 50.0%
CTGCTGCACCATCACTAACT+TGG + Chr4:13611416-13611435 None:intergenic 50.0%
GAAGTGTGGCTGTGCAAAAG+GGG - Chr4:13611454-13611473 MsG0480019034.01.T01:intron 50.0%
GAGCTGCGGCAGTATTTGAA+AGG - Chr4:13613272-13613291 MsG0480019034.01.T01:intron 50.0%
GCAGCTGGAATAGCAAAAGC+TGG + Chr4:13612378-13612397 None:intergenic 50.0%
GCGAATGAAAGTGGTGTCCT+GGG + Chr4:13611839-13611858 None:intergenic 50.0%
GCGGTAGTTAACTACCGATG+GGG - Chr4:13610310-13610329 MsG0480019034.01.T01:intron 50.0%
GCTGCGGCAGTATTTGAAAG+GGG - Chr4:13613274-13613293 MsG0480019034.01.T01:intron 50.0%
GGTGTAGATCCTGCTGTCAT+GGG - Chr4:13612345-13612364 MsG0480019034.01.T01:intron 50.0%
TGAAGGAATTGGGGCTGGAT+TGG - Chr4:13610015-13610034 MsG0480019034.01.T01:CDS 50.0%
TGGTGTAGATCCTGCTGTCA+TGG - Chr4:13612344-13612363 MsG0480019034.01.T01:intron 50.0%
TGTTCTGCTGGACAAACTGG+TGG - Chr4:13608001-13608020 MsG0480019034.01.T01:intron 50.0%
! CAATGTCAATGGTGGTGCCA+TGG - Chr4:13612600-13612619 MsG0480019034.01.T01:intron 50.0%
! CGTGGAAAGGATTGTCGCTT+TGG - Chr4:13613094-13613113 MsG0480019034.01.T01:intron 50.0%
! GAGAAGTGTGGCTGTGCAAA+AGG - Chr4:13611452-13611471 MsG0480019034.01.T01:intron 50.0%
! GTATGGTGTTGGACACGTGT+AGG - Chr4:13608232-13608251 MsG0480019034.01.T01:intron 50.0%
! TGAAGCACTCACACAGACAC+TGG + Chr4:13608526-13608545 None:intergenic 50.0%
!! GGAAGCATTGACTCAGACAC+AGG + Chr4:13608186-13608205 None:intergenic 50.0%
!! TTGAATGAGATGAAGCGCCG+TGG - Chr4:13613076-13613095 MsG0480019034.01.T01:intron 50.0%
!!! AATGGTGGTGCCATGGCTTT+TGG - Chr4:13612607-13612626 MsG0480019034.01.T01:intron 50.0%
!!! GTAGGCACAGTTTTAGGACC+AGG - Chr4:13609494-13609513 MsG0480019034.01.T01:intron 50.0%
ACCAGATGCTGTTGCAGCTG+CGG + Chr4:13611006-13611025 None:intergenic 55.0%
CACAGCGTTACGGTGTGACA+AGG - Chr4:13610859-13610878 MsG0480019034.01.T01:intron 55.0%
CCAGCAGATTTCACTGCAGC+TGG + Chr4:13612393-13612412 None:intergenic 55.0%
CCAGCTGCAGTGAAATCTGC+TGG - Chr4:13612390-13612409 MsG0480019034.01.T01:intron 55.0%
CCGAGACTGTCTTCTTCCCA+TGG - Chr4:13610815-13610834 MsG0480019034.01.T01:intron 55.0%
CGCGAATGAAAGTGGTGTCC+TGG + Chr4:13611840-13611859 None:intergenic 55.0%
GATCCTGCTGTCATGGGTGT+TGG - Chr4:13612351-13612370 MsG0480019034.01.T01:intron 55.0%
TGGTGTCCTGGGCACATTAC+AGG + Chr4:13611828-13611847 None:intergenic 55.0%
! AGCAAAGCGCGGTGGATTCA+AGG - Chr4:13608697-13608716 MsG0480019034.01.T01:CDS 55.0%
! AGGTTCTGGTATGGGAGCTG+CGG - Chr4:13613258-13613277 MsG0480019034.01.T01:CDS 55.0%
! GGACATCCTTTAGGTGCCAC+AGG - Chr4:13612628-13612647 MsG0480019034.01.T01:intron 55.0%
!! TGAGATGAAGCGCCGTGGAA+AGG - Chr4:13613081-13613100 MsG0480019034.01.T01:intron 55.0%
CAGCGGCAGTTAACTGCTGC+CGG - Chr4:13610268-13610287 MsG0480019034.01.T01:CDS 60.0%
GACAAGGCAGGAGCAAGACC+AGG - Chr4:13610875-13610894 MsG0480019034.01.T01:intron 60.0%
GCGTTACGGTGTGACAAGGC+AGG - Chr4:13610863-13610882 MsG0480019034.01.T01:intron 60.0%
GGACCAACACCCATGACAGC+AGG + Chr4:13612357-13612376 None:intergenic 60.0%
GGCAGCAGTTAACTGCCGCT+GGG + Chr4:13610269-13610288 None:intergenic 60.0%
CGGCAGCAGTTAACTGCCGC+TGG + Chr4:13610270-13610289 None:intergenic 65.0%
GCCGCAGCTGCAACAGCATC+TGG - Chr4:13611002-13611021 MsG0480019034.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 13607672 13613606 13607672 ID=MsG0480019034.01;Name=MsG0480019034.01
Chr4 mRNA 13607672 13613606 13607672 ID=MsG0480019034.01.T01;Parent=MsG0480019034.01;Name=MsG0480019034.01.T01;_AED=0.37;_eAED=0.39;_QI=142|0.92|0.92|1|1|1|14|239|472
Chr4 exon 13607672 13608018 13607672 ID=MsG0480019034.01.T01:exon:8470;Parent=MsG0480019034.01.T01
Chr4 exon 13608092 13608225 13608092 ID=MsG0480019034.01.T01:exon:8469;Parent=MsG0480019034.01.T01
Chr4 exon 13608629 13608737 13608629 ID=MsG0480019034.01.T01:exon:8468;Parent=MsG0480019034.01.T01
Chr4 exon 13608826 13608949 13608826 ID=MsG0480019034.01.T01:exon:8467;Parent=MsG0480019034.01.T01
Chr4 exon 13609779 13609875 13609779 ID=MsG0480019034.01.T01:exon:8466;Parent=MsG0480019034.01.T01
Chr4 exon 13610010 13610142 13610010 ID=MsG0480019034.01.T01:exon:8465;Parent=MsG0480019034.01.T01
Chr4 exon 13610217 13610294 13610217 ID=MsG0480019034.01.T01:exon:8464;Parent=MsG0480019034.01.T01
Chr4 exon 13610376 13610483 13610376 ID=MsG0480019034.01.T01:exon:8463;Parent=MsG0480019034.01.T01
Chr4 exon 13611191 13611258 13611191 ID=MsG0480019034.01.T01:exon:8462;Parent=MsG0480019034.01.T01
Chr4 exon 13611348 13611446 13611348 ID=MsG0480019034.01.T01:exon:8461;Parent=MsG0480019034.01.T01
Chr4 exon 13611709 13611835 13611709 ID=MsG0480019034.01.T01:exon:8460;Parent=MsG0480019034.01.T01
Chr4 exon 13612521 13612605 13612521 ID=MsG0480019034.01.T01:exon:8459;Parent=MsG0480019034.01.T01
Chr4 exon 13613228 13613286 13613228 ID=MsG0480019034.01.T01:exon:8458;Parent=MsG0480019034.01.T01
Chr4 exon 13613375 13613606 13613375 ID=MsG0480019034.01.T01:exon:8457;Parent=MsG0480019034.01.T01
Chr4 five_prime_UTR 13613465 13613606 13613465 ID=MsG0480019034.01.T01:five_prime_utr;Parent=MsG0480019034.01.T01
Chr4 CDS 13613375 13613464 13613375 ID=MsG0480019034.01.T01:cds;Parent=MsG0480019034.01.T01
Chr4 CDS 13613228 13613286 13613228 ID=MsG0480019034.01.T01:cds;Parent=MsG0480019034.01.T01
Chr4 CDS 13612521 13612605 13612521 ID=MsG0480019034.01.T01:cds;Parent=MsG0480019034.01.T01
Chr4 CDS 13611709 13611835 13611709 ID=MsG0480019034.01.T01:cds;Parent=MsG0480019034.01.T01
Chr4 CDS 13611348 13611446 13611348 ID=MsG0480019034.01.T01:cds;Parent=MsG0480019034.01.T01
Chr4 CDS 13611191 13611258 13611191 ID=MsG0480019034.01.T01:cds;Parent=MsG0480019034.01.T01
Chr4 CDS 13610376 13610483 13610376 ID=MsG0480019034.01.T01:cds;Parent=MsG0480019034.01.T01
Chr4 CDS 13610217 13610294 13610217 ID=MsG0480019034.01.T01:cds;Parent=MsG0480019034.01.T01
Chr4 CDS 13610010 13610142 13610010 ID=MsG0480019034.01.T01:cds;Parent=MsG0480019034.01.T01
Chr4 CDS 13609779 13609875 13609779 ID=MsG0480019034.01.T01:cds;Parent=MsG0480019034.01.T01
Chr4 CDS 13608826 13608949 13608826 ID=MsG0480019034.01.T01:cds;Parent=MsG0480019034.01.T01
Chr4 CDS 13608629 13608737 13608629 ID=MsG0480019034.01.T01:cds;Parent=MsG0480019034.01.T01
Chr4 CDS 13608092 13608225 13608092 ID=MsG0480019034.01.T01:cds;Parent=MsG0480019034.01.T01
Chr4 CDS 13607911 13608018 13607911 ID=MsG0480019034.01.T01:cds;Parent=MsG0480019034.01.T01
Chr4 three_prime_UTR 13607672 13607910 13607672 ID=MsG0480019034.01.T01:three_prime_utr;Parent=MsG0480019034.01.T01
Gene Sequence

>MsG0480019034.01.T01

ATGGAGAAAGCAGTTGAAAGACAGAGAGTTCTTCTTGAACATCTAAATCCAAATTCAGTTGCTTCATCTTATCATTCCACTCATCTCTCTGCTTCATTTTGTTCTGCTGGACAAACTGGTGGATCTGAAAATGATGTGGTCATTGTAGCTGCATATCGTACTGCTATTTGCAAAGCAAAGCGCGGTGGATTCAAGGATACTCTTCCGGATGATCTACTTGCCTCAGTTCTCAAGGCCGTGATAGAGAAAACAAATGTGGAACCAAGTGAAGTAGGCGACATAGTTGTAGGCACAGTTTTAGGACCAGGATCAGAAAGAGCAATTGAGTGCAGAATGGCTGCATTTTATGCTGGTTTCCCAGAGACTGTGCCGCTTCGAACTGTCAATAGACAATGTTCGTCCGGACTTCAAGCGGTTGCTGATGTTGCTGCTTACATAAAAGCTGGGTTCTATGACATTGGAATTGGGGCTGGATTGGAGTGTATGACACAAGATAGTATTTCGGGGGTTCGCAAAACTAACCCAAAGGTTGAAATCTTTGCACAAGCCCGAGACTGTCTTCTTCCCATGGGAATAACTTCTGAGAATGTTGCACAGCGTTACGGTGTGACAAGGCAGGAGCAAGACCAGGCTGCTGTCGAGTCTCACAGGCGCGCCGCAGCTGCAACAGCATCTGGTAAATTCAAAGACGAAATCATTCCAGTTTCTACAAAGTTTGTGGATCCTAAAACTGGAGAGGAGAAACAAATTACTGTTTCTGTTGACGATGGTATCCGACCAAACACAAATTTGGTAGATCTTGCAAAGCTGAAGCCTGCATTCAAAAAGGATGGAACCACAACTGCAGGGAATGCTAGCCAAGTTAGTGATGGTGCAGCAGCAGTGCTTCTCATGAAGAGAAGTGTGGCTGTGCAAAAGGGGCTTCCTATTCTTGGAATCTTCAGGAGTTTTGCTGCTGTTGGTGTAGATCCTGCTGTCATGGGTGTTGGTCCAGCTTTTGCTATTCCAGCTGCAGTGAAATCTGCTGGTCTTGAACTTAGTAACATTGACTTGTATGAAATAAATGAGGCATTTGCATCACAGTTTGTTTATTCCTGCAAGATATTGGGGCTTGATCCAACAAGGGTCAATGTCAATGGTGGTGCCATGGCTTTTGGACATCCTTTAGGTGCCACAGGTGCACGCTGCGTTTCAACTTTGTTGAATGAGATGAAGCGCCGTGGAAAGGATTGTCGCTTTGGTGTAATCTCGATGTGTATAGGTAATTTCATCGTTTTACCTTATTCCATTTCTTTTGCTGTAGTAGACTATGTTCTGGTATGGGAGCTGCGGCAGTATTTGAAAGGGGAGACTTCTGAGAATTTGTGGAAGTTTAAATGGTTCGAAACATTAGCAATCGTTTGTCACAAGTATGCTTGA

Protein sequence

>MsG0480019034.01.T01

MEKAVERQRVLLEHLNPNSVASSYHSTHLSASFCSAGQTGGSENDVVIVAAYRTAICKAKRGGFKDTLPDDLLASVLKAVIEKTNVEPSEVGDIVVGTVLGPGSERAIECRMAAFYAGFPETVPLRTVNRQCSSGLQAVADVAAYIKAGFYDIGIGAGLECMTQDSISGVRKTNPKVEIFAQARDCLLPMGITSENVAQRYGVTRQEQDQAAVESHRRAAAATASGKFKDEIIPVSTKFVDPKTGEEKQITVSVDDGIRPNTNLVDLAKLKPAFKKDGTTTAGNASQVSDGAAAVLLMKRSVAVQKGLPILGIFRSFAAVGVDPAVMGVGPAFAIPAAVKSAGLELSNIDLYEINEAFASQFVYSCKILGLDPTRVNVNGGAMAFGHPLGATGARCVSTLLNEMKRRGKDCRFGVISMCIGNFIVLPYSISFAVVDYVLVWELRQYLKGETSENLWKFKWFETLAIVCHKYA*