AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480020167.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020167.01.T01 MTR_0008s0280 93.939 165 7 1 1 162 1 165 1.01e-104 299
MsG0480020167.01.T01 MTR_0063s0090 52.406 187 64 3 1 162 1 187 2.74e-63 194
MsG0480020167.01.T01 MTR_2g089450 60.504 119 47 0 1 119 1 119 3.04e-55 174
MsG0480020167.01.T01 MTR_0251s0050 58.462 130 53 1 1 129 1 130 7.82e-55 174
MsG0480020167.01.T01 MTR_0008s0470 54.110 146 59 2 1 145 1 139 3.22e-54 173
MsG0480020167.01.T01 MTR_0008s0390 55.882 136 59 1 1 135 1 136 5.22e-54 172
MsG0480020167.01.T01 MTR_1g076150 63.158 114 42 0 1 114 1 114 6.37e-53 169
MsG0480020167.01.T01 MTR_4g073420 64.035 114 41 0 1 114 1 114 1.52e-52 169
MsG0480020167.01.T01 MTR_2g089420 64.035 114 40 1 1 114 1 113 2.81e-52 172
MsG0480020167.01.T01 MTR_1g043080 48.750 160 69 1 1 147 1 160 3.18e-52 167
MsG0480020167.01.T01 MTR_3g097450 49.390 164 70 1 1 164 1 151 4.20e-52 168
MsG0480020167.01.T01 MTR_8g095390 64.035 114 41 0 1 114 1 114 6.32e-52 168
MsG0480020167.01.T01 MTR_3g074520 62.281 114 43 0 1 114 1 114 8.42e-52 169
MsG0480020167.01.T01 MTR_1g043050 61.404 114 44 0 1 114 1 114 3.96e-51 164
MsG0480020167.01.T01 MTR_7g115650 51.064 141 67 1 1 139 1 141 6.63e-51 162
MsG0480020167.01.T01 MTR_7g096930 54.676 139 63 0 1 139 1 139 3.11e-50 162
MsG0480020167.01.T01 MTR_4g478180 61.404 114 44 0 1 114 2 115 1.03e-49 163
MsG0480020167.01.T01 MTR_5g007370 58.772 114 47 0 1 114 1 114 5.30e-49 160
MsG0480020167.01.T01 MTR_1g100653 58.772 114 47 0 1 114 1 114 5.80e-49 160
MsG0480020167.01.T01 MTR_2g011660 60.870 115 44 1 1 114 1 115 3.05e-48 159
MsG0480020167.01.T01 MTR_4g091490 60.870 115 44 1 1 114 1 115 4.00e-48 159
MsG0480020167.01.T01 MTR_8g027345 59.664 119 48 0 1 119 1 119 4.22e-48 158
MsG0480020167.01.T01 MTR_7g011170 60.526 114 45 0 1 114 1 114 4.51e-48 158
MsG0480020167.01.T01 MTR_2g089620 50.685 146 72 0 1 146 1 146 6.45e-48 158
MsG0480020167.01.T01 MTR_6g012690 53.191 141 65 1 1 140 1 141 1.15e-47 158
MsG0480020167.01.T01 MTR_5g079670 57.522 113 48 0 2 114 1 113 2.82e-47 153
MsG0480020167.01.T01 MTR_2g067420 62.385 109 41 0 3 111 5 113 3.19e-47 156
MsG0480020167.01.T01 MTR_4g082290 51.351 148 65 1 1 141 1 148 3.55e-47 158
MsG0480020167.01.T01 MTR_5g029840 54.615 130 58 1 1 129 1 130 2.88e-46 154
MsG0480020167.01.T01 MTR_7g117730 58.772 114 47 0 1 114 1 114 3.46e-46 152
MsG0480020167.01.T01 MTR_4g102380 57.895 114 48 0 1 114 1 114 6.80e-46 151
MsG0480020167.01.T01 MTR_7g076740 55.652 115 50 1 1 114 1 115 9.99e-46 152
MsG0480020167.01.T01 MTR_4g121460 59.649 114 46 0 1 114 1 114 1.45e-45 152
MsG0480020167.01.T01 MTR_7g010210 54.545 121 55 0 1 121 1 121 1.59e-45 150
MsG0480020167.01.T01 MTR_7g010210 54.545 121 55 0 1 121 1 121 1.97e-45 152
MsG0480020167.01.T01 MTR_4g125520 57.895 114 48 0 1 114 1 114 1.10e-44 149
MsG0480020167.01.T01 MTR_3g065440 55.932 118 52 0 1 118 1 118 1.64e-44 149
MsG0480020167.01.T01 MTR_5g078140 55.932 118 52 0 1 118 1 118 2.23e-44 149
MsG0480020167.01.T01 MTR_4g485530 60.185 108 40 1 7 114 10 114 3.14e-44 145
MsG0480020167.01.T01 MTR_2g064160 48.175 137 58 1 9 145 8 131 3.23e-44 148
MsG0480020167.01.T01 MTR_4g082230 49.324 148 68 1 1 141 1 148 6.05e-44 150
MsG0480020167.01.T01 MTR_7g109320 53.061 147 58 3 1 138 1 145 6.80e-44 148
MsG0480020167.01.T01 MTR_3g039990 51.163 129 59 1 1 125 2 130 8.55e-44 147
MsG0480020167.01.T01 MTR_2g034790 57.895 114 48 0 1 114 1 114 1.02e-43 147
MsG0480020167.01.T01 MTR_1g085040 59.434 106 43 0 9 114 9 114 1.10e-43 148
MsG0480020167.01.T01 MTR_8g031360 56.034 116 49 2 1 114 1 116 1.79e-43 146
MsG0480020167.01.T01 MTR_4g100720 59.434 106 43 0 9 114 10 115 5.40e-43 141
MsG0480020167.01.T01 MTR_6g012180 54.955 111 50 0 1 111 1 111 6.52e-43 145
MsG0480020167.01.T01 MTR_3g461490 54.386 114 52 0 1 114 1 114 7.42e-43 145
MsG0480020167.01.T01 MTR_7g110830 59.434 106 43 0 9 114 9 114 7.56e-43 146
MsG0480020167.01.T01 MTR_1g085640 59.434 106 43 0 9 114 9 114 1.10e-42 146
MsG0480020167.01.T01 MTR_6g055910 48.466 163 74 2 4 166 6 158 1.12e-42 143
MsG0480020167.01.T01 MTR_1g017000 44.231 156 84 2 1 155 1 154 1.89e-42 142
MsG0480020167.01.T01 MTR_1g017140 57.391 115 48 1 1 114 1 115 2.47e-42 144
MsG0480020167.01.T01 MTR_3g083540 57.273 110 47 0 5 114 34 143 2.93e-42 143
MsG0480020167.01.T01 MTR_2g095520 57.658 111 46 1 1 110 1 111 3.67e-42 143
MsG0480020167.01.T01 MTR_4g057635 56.522 115 49 1 1 114 1 115 3.77e-42 143
MsG0480020167.01.T01 MTR_3g103570 51.938 129 59 2 1 126 1 129 4.04e-42 144
MsG0480020167.01.T01 MTR_5g014990 55.652 115 50 1 1 114 1 115 5.53e-42 142
MsG0480020167.01.T01 MTR_7g087130 56.140 114 50 0 1 114 1 114 7.65e-42 143
MsG0480020167.01.T01 MTR_8g017540 46.897 145 72 2 8 150 54 195 1.06e-41 144
MsG0480020167.01.T01 MTR_7g102110 53.913 115 52 1 1 114 1 115 1.67e-41 140
MsG0480020167.01.T01 MTR_4g097570 53.543 127 58 1 1 126 1 127 1.72e-41 140
MsG0480020167.01.T01 MTR_0140s0030 54.386 114 52 0 1 114 2 115 1.74e-41 142
MsG0480020167.01.T01 MTR_0489s0020 54.386 114 52 0 1 114 2 115 1.74e-41 142
MsG0480020167.01.T01 MTR_8g017440 55.140 107 48 0 8 114 8 114 1.96e-41 142
MsG0480020167.01.T01 MTR_4g105130 57.547 106 45 0 9 114 9 114 2.46e-41 142
MsG0480020167.01.T01 MTR_8g017500 55.140 107 48 0 8 114 8 114 5.57e-41 140
MsG0480020167.01.T01 MTR_1g073170 55.172 116 51 1 13 128 21 135 5.62e-41 138
MsG0480020167.01.T01 MTR_2g099740 55.140 107 48 0 8 114 8 114 5.70e-41 142
MsG0480020167.01.T01 MTR_6g090405 42.775 173 82 5 1 164 1 165 9.15e-41 138
MsG0480020167.01.T01 MTR_4g097570 53.125 128 58 2 1 126 1 128 9.21e-41 139
MsG0480020167.01.T01 MTR_6g009430 50.877 114 56 0 1 114 1 114 1.27e-40 139
MsG0480020167.01.T01 MTR_7g111290 47.552 143 58 2 13 141 13 152 1.78e-40 140
MsG0480020167.01.T01 MTR_1g100667 60.784 102 40 0 13 114 14 115 1.86e-40 137
MsG0480020167.01.T01 MTR_1g112760 54.717 106 48 0 9 114 10 115 2.18e-40 136
MsG0480020167.01.T01 MTR_7g035075 42.138 159 90 1 12 168 14 172 2.84e-40 135
MsG0480020167.01.T01 MTR_1g110460 56.075 107 47 0 8 114 22 128 3.29e-40 138
MsG0480020167.01.T01 MTR_4g128670 56.757 111 47 1 1 110 1 111 4.03e-40 139
MsG0480020167.01.T01 MTR_8g098860 56.311 103 45 0 12 114 12 114 7.16e-40 137
MsG0480020167.01.T01 MTR_0197s0010 45.270 148 74 2 16 159 5 149 8.56e-40 134
MsG0480020167.01.T01 MTR_3g077110 54.717 106 48 0 9 114 9 114 9.44e-40 137
MsG0480020167.01.T01 MTR_5g010020 57.576 99 42 0 12 110 12 110 1.24e-39 137
MsG0480020167.01.T01 MTR_1g045610 56.190 105 46 0 13 117 22 126 1.37e-39 135
MsG0480020167.01.T01 MTR_1g062940 57.843 102 43 0 13 114 7 108 1.74e-39 133
MsG0480020167.01.T01 MTR_6g006030 55.963 109 48 0 12 120 14 122 2.75e-39 132
MsG0480020167.01.T01 MTR_1g086530 53.774 106 49 0 13 118 34 139 3.76e-39 134
MsG0480020167.01.T01 MTR_5g042030 56.731 104 45 0 11 114 6 109 4.06e-39 134
MsG0480020167.01.T01 MTR_5g079290 55.769 104 46 0 11 114 16 119 4.93e-39 134
MsG0480020167.01.T01 MTR_0001s0360 56.731 104 45 0 11 114 6 109 8.22e-39 132
MsG0480020167.01.T01 MTR_8g020490 51.240 121 55 1 1 121 1 117 1.08e-38 132
MsG0480020167.01.T01 MTR_2g097910 54.902 102 46 0 13 114 21 122 1.90e-38 133
MsG0480020167.01.T01 MTR_1g086510 53.153 111 52 0 8 118 17 127 2.43e-38 132
MsG0480020167.01.T01 MTR_5g062790 45.139 144 70 3 12 146 9 152 3.98e-38 132
MsG0480020167.01.T01 MTR_5g079120 44.966 149 76 2 8 154 57 201 7.32e-38 132
MsG0480020167.01.T01 MTR_7g017260 44.805 154 77 3 11 161 24 172 7.45e-38 131
MsG0480020167.01.T01 MTR_5g079220 53.846 104 48 0 11 114 20 123 8.14e-38 130
MsG0480020167.01.T01 MTR_8g017390 52.778 108 50 1 8 114 8 115 2.67e-37 133
MsG0480020167.01.T01 MTR_4g063100 50.862 116 55 1 12 127 7 120 3.88e-37 128
MsG0480020167.01.T01 MTR_8g042410 53.922 102 47 0 13 114 38 139 6.06e-37 133
MsG0480020167.01.T01 MTR_1g021230 52.336 107 51 0 13 119 58 164 7.08e-37 132
MsG0480020167.01.T01 MTR_4g065017 54.286 105 48 0 10 114 15 119 8.01e-37 129
MsG0480020167.01.T01 MTR_3g028740 52.778 108 51 0 7 114 17 124 9.07e-37 130
MsG0480020167.01.T01 MTR_8g017340 53.271 107 49 1 9 114 9 115 1.22e-36 132
MsG0480020167.01.T01 MTR_5g088080 52.336 107 50 1 12 117 12 118 1.59e-36 127
MsG0480020167.01.T01 MTR_5g088150 52.336 107 50 1 12 117 12 118 1.59e-36 127
MsG0480020167.01.T01 MTR_5g488210 52.336 107 50 1 12 117 12 118 1.59e-36 127
MsG0480020167.01.T01 MTR_8g060940 52.941 102 48 0 11 112 6 107 1.85e-36 126
MsG0480020167.01.T01 MTR_5g078910 54.902 102 46 0 13 114 8 109 1.94e-36 128
MsG0480020167.01.T01 MTR_3g052450 51.402 107 52 0 8 114 36 142 2.07e-36 132
MsG0480020167.01.T01 MTR_5g078950 52.941 102 48 0 11 112 6 107 2.21e-36 127
MsG0480020167.01.T01 MTR_5g488170 52.336 107 50 1 12 117 12 118 2.37e-36 126
MsG0480020167.01.T01 MTR_5g088640 52.336 107 50 1 12 117 12 118 2.62e-36 127
MsG0480020167.01.T01 MTR_3g052430 52.941 102 48 0 13 114 42 143 4.44e-36 131
MsG0480020167.01.T01 MTR_2g096380 43.609 133 65 1 12 144 6 128 7.21e-36 124
MsG0480020167.01.T01 MTR_5g078860 53.846 104 48 0 11 114 6 109 1.00e-35 126
MsG0480020167.01.T01 MTR_8g017350 52.336 107 50 1 9 114 9 115 1.05e-35 130
MsG0480020167.01.T01 MTR_0247s0040 51.429 105 51 0 8 112 3 107 1.42e-35 122
MsG0480020167.01.T01 MTR_5g078800 52.885 104 49 0 11 114 6 109 2.32e-35 124
MsG0480020167.01.T01 MTR_3g011610 53.061 98 46 0 13 110 38 135 2.61e-35 129
MsG0480020167.01.T01 MTR_0193s0090 50.962 104 51 0 11 114 6 109 3.31e-34 119
MsG0480020167.01.T01 MTR_2g033170 53.153 111 52 0 8 118 20 130 5.30e-34 122
MsG0480020167.01.T01 MTR_5g078930 44.444 126 68 1 13 136 10 135 4.58e-33 117
MsG0480020167.01.T01 MTR_2g088170 45.669 127 67 1 9 135 26 150 8.21e-33 121
MsG0480020167.01.T01 MTR_1g083630 50.909 110 54 0 8 117 8 117 2.02e-32 121
MsG0480020167.01.T01 MTR_5g007300 55.682 88 39 0 1 88 53 140 2.33e-32 113
MsG0480020167.01.T01 MTR_5g088610 50.467 107 52 1 12 117 9 115 2.71e-32 118
MsG0480020167.01.T01 MTR_4g123040 50.450 111 55 0 8 118 20 130 4.70e-32 117
MsG0480020167.01.T01 MTR_6g055910 49.606 127 54 2 40 166 13 129 3.66e-31 113
MsG0480020167.01.T01 MTR_8g006470 44.144 111 61 1 8 117 6 116 1.02e-30 112
MsG0480020167.01.T01 MTR_4g063100 60.000 85 32 1 43 127 9 91 4.09e-30 109
MsG0480020167.01.T01 MTR_4g029540 45.283 106 57 1 7 111 5 110 1.77e-29 109
MsG0480020167.01.T01 MTR_2g096380 48.571 105 44 1 40 144 15 109 3.05e-28 104
MsG0480020167.01.T01 MTR_4g128190 46.789 109 44 2 11 118 10 105 5.72e-28 104
MsG0480020167.01.T01 MTR_4g019370 42.953 149 77 4 14 161 38 179 7.02e-28 106
MsG0480020167.01.T01 MTR_5g082910 48.598 107 51 3 8 112 12 116 1.44e-27 104
MsG0480020167.01.T01 MTR_7g111290 46.903 113 43 2 43 141 1 110 5.84e-27 103
MsG0480020167.01.T01 MTR_1g085880 49.038 104 51 2 13 114 12 115 1.81e-26 99.8
MsG0480020167.01.T01 MTR_3g045430 40.000 115 68 1 1 114 1 115 1.92e-26 102
MsG0480020167.01.T01 MTR_3g101290 45.545 101 54 1 14 114 37 136 4.26e-26 99.4
MsG0480020167.01.T01 MTR_4g094982 46.535 101 53 1 14 114 5 104 7.16e-26 99.8
MsG0480020167.01.T01 MTR_5g016510 44.348 115 61 2 14 127 5 117 8.48e-26 100
MsG0480020167.01.T01 MTR_1g085770 49.038 104 51 2 13 114 12 115 8.88e-26 100
MsG0480020167.01.T01 MTR_6g015455 48.571 105 50 3 14 116 5 107 1.84e-25 102
MsG0480020167.01.T01 MTR_5g049190 41.228 114 63 3 8 119 13 124 3.71e-25 97.4
MsG0480020167.01.T01 MTR_7g061330 42.574 101 57 1 14 114 113 212 8.09e-24 97.4
MsG0480020167.01.T01 MTR_7g061330 37.383 107 65 2 14 119 61 166 5.61e-16 74.7
MsG0480020167.01.T01 MTR_7g461410 42.574 101 57 1 14 114 113 212 8.09e-24 97.4
MsG0480020167.01.T01 MTR_7g461410 37.383 107 65 2 14 119 61 166 5.61e-16 74.7
MsG0480020167.01.T01 MTR_7g061330 42.574 101 57 1 14 114 77 176 1.04e-23 97.1
MsG0480020167.01.T01 MTR_7g061330 37.383 107 65 2 14 119 25 130 5.95e-16 74.7
MsG0480020167.01.T01 MTR_3g089045 34.356 163 96 6 8 167 10 164 1.37e-23 94.4
MsG0480020167.01.T01 MTR_5g070020 37.719 114 68 2 14 126 122 233 2.04e-23 94.7
MsG0480020167.01.T01 MTR_7g035350 42.424 99 56 1 12 110 223 320 2.14e-23 95.5
MsG0480020167.01.T01 MTR_7g451170 42.268 97 55 1 14 110 191 286 2.32e-23 95.1
MsG0480020167.01.T01 MTR_6g074860 41.667 96 55 1 14 109 4 98 2.36e-23 92.4
MsG0480020167.01.T01 MTR_7g037260 42.268 97 55 1 14 110 145 240 4.44e-23 94.0
MsG0480020167.01.T01 MTR_3g463400 38.136 118 67 3 14 130 133 245 5.11e-23 94.7
MsG0480020167.01.T01 MTR_6g027340 40.777 103 60 1 7 109 9 110 7.12e-23 90.5
MsG0480020167.01.T01 MTR_1g057980 41.837 98 56 1 13 110 79 175 3.87e-22 90.5
MsG0480020167.01.T01 MTR_4g105660 42.056 107 58 3 14 118 180 284 4.12e-22 92.0
MsG0480020167.01.T01 MTR_5g041570 42.268 97 53 2 14 109 134 228 6.40e-22 91.3
MsG0480020167.01.T01 MTR_4g088015 41.237 97 56 1 14 110 221 316 1.39e-21 90.5
MsG0480020167.01.T01 MTR_6g027360 40.385 104 59 2 7 109 71 172 1.43e-21 89.0
MsG0480020167.01.T01 MTR_4g082040 41.237 97 54 2 14 109 105 199 2.14e-21 89.7
MsG0480020167.01.T01 MTR_3g077650 39.623 106 62 2 14 118 181 285 3.59e-21 89.4
MsG0480020167.01.T01 MTR_3g110028 39.216 102 59 2 14 114 85 184 5.55e-21 89.4
MsG0480020167.01.T01 MTR_3g110028 36.893 103 63 2 12 113 31 132 1.01e-15 74.3
MsG0480020167.01.T01 MTR_1g026870 41.176 102 57 2 14 114 85 184 8.33e-21 89.0
MsG0480020167.01.T01 MTR_1g026870 36.111 108 57 3 12 113 31 132 8.96e-16 74.3
MsG0480020167.01.T01 MTR_5g010650 42.708 96 54 1 14 109 110 204 1.12e-20 88.2
MsG0480020167.01.T01 MTR_5g010650 32.773 119 76 3 12 126 53 171 3.25e-13 66.6
MsG0480020167.01.T01 MTR_7g037130 40.206 97 57 1 14 110 145 240 1.88e-20 86.7
MsG0480020167.01.T01 MTR_0023s0210 47.436 78 41 0 11 88 6 83 1.90e-20 80.9
MsG0480020167.01.T01 MTR_7g450950 36.364 99 62 1 12 110 155 252 1.40e-19 84.0
MsG0480020167.01.T01 MTR_6g027370 40.206 97 55 2 14 109 99 193 2.23e-19 83.6
MsG0480020167.01.T01 MTR_7g086960 40.206 97 55 2 14 109 89 183 3.17e-19 83.2
MsG0480020167.01.T01 MTR_7g061550 35.115 131 78 4 17 144 10 136 3.07e-17 77.8
MsG0480020167.01.T01 MTR_8g468380 39.048 105 62 2 16 120 24 126 4.16e-17 77.8
MsG0480020167.01.T01 MTR_5g038910 34.314 102 66 1 16 117 28 128 1.43e-14 70.5
MsG0480020167.01.T01 MTR_5g038910 34.314 102 66 1 16 117 28 128 1.84e-14 70.1
MsG0480020167.01.T01 MTR_6g055910 45.161 93 41 2 74 166 6 88 3.30e-14 67.8
MsG0480020167.01.T01 MTR_4g063100 61.364 44 17 0 71 114 2 45 3.59e-13 64.7
MsG0480020167.01.T01 MTR_6g080360 33.333 114 66 4 12 118 528 638 2.87e-12 64.3
MsG0480020167.01.T01 MTR_6g080360 33.333 114 66 4 12 118 308 418 5.29e-12 63.5
MsG0480020167.01.T01 MTR_2g096380 40.541 74 34 1 71 144 2 65 8.33e-12 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020167.01.T01 AT4G09460 52.903 155 60 1 1 155 1 142 6.56e-54 171
MsG0480020167.01.T01 AT5G16770 65.789 114 39 0 1 114 1 114 7.43e-54 173
MsG0480020167.01.T01 AT5G16770 65.789 114 39 0 1 114 1 114 7.43e-54 173
MsG0480020167.01.T01 AT5G16770 65.789 114 39 0 1 114 1 114 1.42e-53 173
MsG0480020167.01.T01 AT5G16770 65.789 114 39 0 1 114 1 114 1.42e-53 173
MsG0480020167.01.T01 AT4G38620 64.035 114 41 0 1 114 1 114 2.02e-53 171
MsG0480020167.01.T01 AT1G22640 52.632 152 59 1 1 152 1 139 1.14e-52 168
MsG0480020167.01.T01 AT2G31180 52.201 159 67 3 1 150 1 159 3.34e-52 167
MsG0480020167.01.T01 AT2G16720 63.158 114 42 0 1 114 1 114 4.10e-52 167
MsG0480020167.01.T01 AT1G35515 58.824 136 51 2 1 131 1 136 6.31e-52 165
MsG0480020167.01.T01 AT4G34990 64.035 114 41 0 1 114 1 114 1.47e-51 166
MsG0480020167.01.T01 AT3G02940 64.035 114 41 0 1 114 1 114 1.77e-51 167
MsG0480020167.01.T01 AT3G02940 64.035 114 41 0 1 114 1 114 3.14e-51 166
MsG0480020167.01.T01 AT3G02940 64.035 114 41 0 1 114 1 114 3.14e-51 166
MsG0480020167.01.T01 AT3G23250 52.941 153 67 2 1 151 1 150 3.19e-51 166
MsG0480020167.01.T01 AT1G06180 64.035 114 41 0 1 114 1 114 8.14e-51 163
MsG0480020167.01.T01 AT1G79180 55.224 134 59 1 3 135 5 138 1.16e-50 164
MsG0480020167.01.T01 AT4G21440 59.649 114 46 0 1 114 1 114 5.77e-50 164
MsG0480020167.01.T01 AT3G01140 63.158 114 42 0 1 114 1 114 9.25e-50 163
MsG0480020167.01.T01 AT5G10280 57.895 114 48 0 1 114 1 114 1.69e-49 162
MsG0480020167.01.T01 AT4G28110 61.404 114 44 0 1 114 1 114 2.00e-49 160
MsG0480020167.01.T01 AT3G61250 58.772 114 47 0 1 114 1 114 2.90e-49 161
MsG0480020167.01.T01 AT3G01140 62.281 114 43 0 1 114 44 157 4.15e-49 163
MsG0480020167.01.T01 AT1G16490 61.607 112 43 0 3 114 5 116 5.03e-49 159
MsG0480020167.01.T01 AT3G12820 62.500 112 42 0 3 114 5 116 6.16e-49 158
MsG0480020167.01.T01 AT1G74080 60.526 114 45 0 1 114 1 114 6.90e-49 161
MsG0480020167.01.T01 AT1G56160 62.500 112 42 0 3 114 5 116 9.20e-49 159
MsG0480020167.01.T01 AT5G15310 62.281 114 43 0 1 114 1 114 1.16e-48 158
MsG0480020167.01.T01 AT5G15310 62.281 114 43 0 1 114 1 114 1.51e-48 160
MsG0480020167.01.T01 AT5G15310 62.281 114 43 0 1 114 1 114 1.54e-48 159
MsG0480020167.01.T01 AT5G60890 56.452 124 54 0 1 124 1 124 2.81e-48 158
MsG0480020167.01.T01 AT1G18570 60.870 115 44 1 1 114 1 115 2.85e-48 160
MsG0480020167.01.T01 AT1G34670 60.526 114 45 0 1 114 1 114 7.15e-48 159
MsG0480020167.01.T01 AT5G65230 58.772 114 47 0 1 114 1 114 8.77e-48 157
MsG0480020167.01.T01 AT4G05100 60.870 115 44 1 1 114 1 115 1.71e-47 157
MsG0480020167.01.T01 AT5G07690 57.391 115 49 0 1 115 1 115 1.39e-46 155
MsG0480020167.01.T01 AT5G07700 57.018 114 49 0 1 114 1 114 2.18e-46 154
MsG0480020167.01.T01 AT5G07700 57.018 114 49 0 1 114 1 114 2.18e-46 154
MsG0480020167.01.T01 AT5G49330 59.649 114 46 0 1 114 1 114 4.42e-46 154
MsG0480020167.01.T01 AT5G61420 57.895 114 48 0 1 114 1 114 4.44e-46 154
MsG0480020167.01.T01 AT4G22680 59.649 114 46 0 1 114 1 114 1.34e-45 150
MsG0480020167.01.T01 AT4G17785 58.261 115 47 1 1 114 1 115 1.87e-45 152
MsG0480020167.01.T01 AT4G17785 58.261 115 47 1 1 114 1 115 2.47e-45 152
MsG0480020167.01.T01 AT2G47460 59.649 114 46 0 1 114 1 114 3.84e-45 152
MsG0480020167.01.T01 AT4G12350 46.835 158 69 1 1 143 1 158 4.73e-45 150
MsG0480020167.01.T01 AT3G13540 57.658 111 47 0 4 114 15 125 8.69e-45 148
MsG0480020167.01.T01 AT3G62610 58.772 114 47 0 1 114 1 114 9.56e-45 150
MsG0480020167.01.T01 AT3G12720 55.660 106 47 0 9 114 19 124 1.25e-44 149
MsG0480020167.01.T01 AT3G28910 57.018 114 49 0 1 114 1 114 2.23e-44 149
MsG0480020167.01.T01 AT5G26660 59.091 110 45 0 9 118 9 118 3.19e-44 149
MsG0480020167.01.T01 AT5G16600 57.895 114 48 0 1 114 1 114 4.61e-44 148
MsG0480020167.01.T01 AT1G79180 44.311 167 59 2 3 135 5 171 5.18e-44 148
MsG0480020167.01.T01 AT1G66230 56.140 114 50 0 1 114 1 114 8.02e-44 146
MsG0480020167.01.T01 AT5G54230 59.223 103 42 0 12 114 12 114 1.34e-43 147
MsG0480020167.01.T01 AT1G74430 45.985 137 74 0 1 137 1 137 1.35e-43 145
MsG0480020167.01.T01 AT1G08810 50.725 138 64 1 1 138 1 134 1.81e-43 145
MsG0480020167.01.T01 AT3G47600 54.918 122 54 1 1 121 1 122 1.93e-43 147
MsG0480020167.01.T01 AT5G14750 46.980 149 63 2 10 142 14 162 1.01e-42 141
MsG0480020167.01.T01 AT1G09540 58.491 106 44 0 9 114 9 114 1.38e-42 145
MsG0480020167.01.T01 AT4G37780 57.391 115 48 1 1 114 1 115 2.52e-42 143
MsG0480020167.01.T01 AT1G57560 57.547 106 45 0 9 114 9 114 2.86e-42 142
MsG0480020167.01.T01 AT1G57560 57.547 106 45 0 9 114 9 114 2.91e-42 143
MsG0480020167.01.T01 AT5G40330 46.667 135 65 1 13 140 13 147 3.51e-42 140
MsG0480020167.01.T01 AT4G01680 56.140 114 50 0 1 114 1 114 4.42e-42 140
MsG0480020167.01.T01 AT3G27810 48.175 137 65 1 12 142 20 156 5.46e-42 140
MsG0480020167.01.T01 AT1G74650 55.263 114 51 0 1 114 1 114 6.57e-42 143
MsG0480020167.01.T01 AT5G62470 48.227 141 72 1 1 140 1 141 7.30e-42 143
MsG0480020167.01.T01 AT1G18710 52.632 114 54 0 1 114 1 114 8.33e-42 141
MsG0480020167.01.T01 AT5G14340 56.140 114 50 0 1 114 13 126 9.25e-42 141
MsG0480020167.01.T01 AT5G56110 53.509 114 53 0 1 114 1 114 1.22e-41 142
MsG0480020167.01.T01 AT4G01680 59.804 102 41 0 13 114 13 114 3.49e-41 141
MsG0480020167.01.T01 AT5G23000 54.783 115 51 1 1 114 1 115 3.79e-41 140
MsG0480020167.01.T01 AT5G57620 54.783 115 51 1 1 114 1 115 4.86e-41 140
MsG0480020167.01.T01 AT3G27920 55.882 102 45 0 13 114 15 116 4.97e-41 137
MsG0480020167.01.T01 AT5G62320 50.420 119 52 1 3 114 4 122 5.23e-41 138
MsG0480020167.01.T01 AT5G65790 49.630 135 67 1 1 134 1 135 7.83e-41 141
MsG0480020167.01.T01 AT3G24310 57.944 107 45 0 11 117 17 123 1.03e-40 138
MsG0480020167.01.T01 AT3G13890 55.140 107 48 0 8 114 8 114 1.12e-40 140
MsG0480020167.01.T01 AT5G62470 48.227 141 71 2 1 140 1 140 1.94e-40 139
MsG0480020167.01.T01 AT3G49690 51.587 126 60 1 1 125 1 126 2.01e-40 138
MsG0480020167.01.T01 AT3G28470 50.909 110 54 0 1 110 1 110 3.86e-40 138
MsG0480020167.01.T01 AT5G40350 48.872 133 64 1 12 144 17 145 1.64e-39 133
MsG0480020167.01.T01 AT4G13480 54.310 116 51 1 13 126 7 122 1.98e-39 134
MsG0480020167.01.T01 AT5G52260 59.434 106 43 0 9 114 9 114 2.19e-39 134
MsG0480020167.01.T01 AT2G36890 54.783 115 51 1 1 114 1 115 2.42e-39 135
MsG0480020167.01.T01 AT3G48920 50.400 125 59 1 9 130 15 139 2.49e-39 134
MsG0480020167.01.T01 AT2G36890 54.783 115 51 1 1 114 42 156 3.42e-39 136
MsG0480020167.01.T01 AT5G52600 55.660 106 47 0 9 114 9 114 5.50e-39 132
MsG0480020167.01.T01 AT1G63910 55.340 103 46 0 12 114 12 114 7.36e-39 135
MsG0480020167.01.T01 AT3G11440 55.882 102 45 0 13 114 42 143 8.33e-39 137
MsG0480020167.01.T01 AT5G35550 55.455 110 49 0 14 123 16 125 1.06e-38 132
MsG0480020167.01.T01 AT3G11440 55.882 102 45 0 13 114 42 143 2.00e-38 137
MsG0480020167.01.T01 AT3G11440 55.882 102 45 0 13 114 42 143 2.00e-38 137
MsG0480020167.01.T01 AT3G11440 55.882 102 45 0 13 114 42 143 2.00e-38 137
MsG0480020167.01.T01 AT1G48000 53.333 105 49 0 13 117 33 137 2.14e-38 131
MsG0480020167.01.T01 AT5G06100 53.271 107 50 0 8 114 28 134 4.45e-38 135
MsG0480020167.01.T01 AT2G26960 51.376 109 53 0 9 117 17 125 4.72e-38 135
MsG0480020167.01.T01 AT3G30210 53.097 113 53 0 11 123 26 138 6.38e-38 131
MsG0480020167.01.T01 AT4G25560 54.386 114 50 1 1 114 1 112 6.76e-38 131
MsG0480020167.01.T01 AT4G01680 53.509 114 41 1 13 114 13 126 9.34e-38 132
MsG0480020167.01.T01 AT3G13890 50.862 116 48 1 8 114 8 123 1.20e-37 132
MsG0480020167.01.T01 AT4G26930 50.943 106 52 0 13 118 20 125 1.20e-37 133
MsG0480020167.01.T01 AT5G06100 52.778 108 51 0 7 114 27 134 1.23e-37 135
MsG0480020167.01.T01 AT5G06100 52.778 108 51 0 7 114 27 134 1.23e-37 135
MsG0480020167.01.T01 AT5G06100 52.778 108 51 0 7 114 27 134 1.23e-37 135
MsG0480020167.01.T01 AT5G06100 52.778 108 51 0 7 114 27 134 1.23e-37 135
MsG0480020167.01.T01 AT3G08500 55.882 102 45 0 13 114 31 132 2.58e-37 131
MsG0480020167.01.T01 AT2G32460 52.885 104 49 0 11 114 5 108 3.68e-37 133
MsG0480020167.01.T01 AT2G32460 52.885 104 49 0 11 114 17 120 3.79e-37 133
MsG0480020167.01.T01 AT5G55020 53.398 103 48 0 13 115 27 129 4.85e-37 133
MsG0480020167.01.T01 AT5G12870 52.727 110 51 1 13 121 19 128 6.73e-37 129
MsG0480020167.01.T01 AT2G47190 52.830 106 50 0 12 117 20 125 8.32e-37 128
MsG0480020167.01.T01 AT3G01530 49.091 110 56 0 8 117 21 130 1.98e-36 125
MsG0480020167.01.T01 AT3G53200 55.963 109 47 1 7 114 3 111 3.29e-36 125
MsG0480020167.01.T01 AT3G46130 52.885 104 49 0 11 114 8 111 4.11e-36 126
MsG0480020167.01.T01 AT1G68320 50.943 106 52 0 13 118 20 125 9.65e-36 125
MsG0480020167.01.T01 AT5G59780 52.941 102 48 0 13 114 9 110 2.31e-35 123
MsG0480020167.01.T01 AT1G25340 50.943 106 52 0 13 118 19 124 3.08e-35 124
MsG0480020167.01.T01 AT1G66370 50.962 104 51 0 11 114 7 110 4.86e-35 123
MsG0480020167.01.T01 AT1G56650 40.854 164 89 2 11 166 7 170 2.47e-34 121
MsG0480020167.01.T01 AT3G06490 53.153 111 52 0 8 118 15 125 2.65e-34 123
MsG0480020167.01.T01 AT1G66380 53.846 104 48 0 11 114 7 110 3.75e-34 117
MsG0480020167.01.T01 AT5G49620 54.206 107 49 0 12 118 26 132 9.15e-34 121
MsG0480020167.01.T01 AT1G66390 53.846 104 48 0 11 114 7 110 3.82e-33 118
MsG0480020167.01.T01 AT5G14750 58.750 80 28 1 40 114 5 84 4.94e-32 113
MsG0480020167.01.T01 AT3G27810 50.000 104 46 1 45 142 4 107 5.76e-32 113
MsG0480020167.01.T01 AT3G60460 46.364 110 58 1 9 117 8 117 8.82e-31 113
MsG0480020167.01.T01 AT1G25340 48.113 106 50 1 13 118 19 119 9.65e-31 112
MsG0480020167.01.T01 AT1G25340 48.113 106 50 1 13 118 19 119 1.46e-30 112
MsG0480020167.01.T01 AT3G12820 68.657 67 21 0 48 114 2 68 2.84e-30 109
MsG0480020167.01.T01 AT5G26660 64.865 74 26 0 45 118 14 87 5.24e-30 111
MsG0480020167.01.T01 AT5G49620 47.934 121 49 1 12 118 26 146 5.30e-30 111
MsG0480020167.01.T01 AT5G35550 58.333 84 35 0 40 123 45 128 7.32e-30 110
MsG0480020167.01.T01 AT3G09230 53.922 102 44 2 14 114 55 154 9.52e-30 112
MsG0480020167.01.T01 AT5G40350 51.000 100 45 1 45 144 5 100 3.46e-29 105
MsG0480020167.01.T01 AT3G46130 62.500 72 27 0 43 114 8 79 3.43e-28 104
MsG0480020167.01.T01 AT5G59780 64.286 70 25 0 45 114 20 89 7.02e-28 103
MsG0480020167.01.T01 AT3G46130 64.286 70 25 0 45 114 20 89 7.81e-28 104
MsG0480020167.01.T01 AT3G55730 41.722 151 80 5 14 161 56 201 1.07e-27 107
MsG0480020167.01.T01 AT3G53200 65.714 70 24 0 45 114 9 78 1.43e-27 102
MsG0480020167.01.T01 AT3G47600 58.974 78 31 1 45 121 39 116 6.91e-27 103
MsG0480020167.01.T01 AT2G26950 44.330 97 54 0 14 110 18 114 1.00e-26 103
MsG0480020167.01.T01 AT4G18770 37.500 152 92 3 9 158 212 362 1.40e-26 104
MsG0480020167.01.T01 AT5G40360 40.323 124 69 3 1 120 145 267 3.13e-26 102
MsG0480020167.01.T01 AT3G27785 43.299 97 54 1 14 110 189 284 1.17e-24 99.0
MsG0480020167.01.T01 AT3G09370 42.593 108 53 2 14 117 135 237 2.17e-24 99.0
MsG0480020167.01.T01 AT3G09370 36.634 101 62 2 14 113 83 182 9.14e-16 74.3
MsG0480020167.01.T01 AT3G09370 42.593 108 53 2 14 117 130 232 2.40e-24 98.6
MsG0480020167.01.T01 AT3G09370 36.634 101 62 2 14 113 78 177 1.02e-15 73.9
MsG0480020167.01.T01 AT3G09370 42.593 108 53 2 14 117 143 245 2.79e-24 98.6
MsG0480020167.01.T01 AT3G09370 36.634 101 62 2 14 113 91 190 8.51e-16 74.3
MsG0480020167.01.T01 AT1G22640 47.368 95 37 1 58 152 1 82 6.07e-24 93.2
MsG0480020167.01.T01 AT2G23290 46.078 102 52 2 14 114 13 112 6.48e-24 95.5
MsG0480020167.01.T01 AT5G11510 42.574 101 57 1 14 114 81 180 7.89e-24 97.4
MsG0480020167.01.T01 AT5G11510 35.922 103 64 2 12 113 27 128 1.10e-14 71.2
MsG0480020167.01.T01 AT5G11510 42.574 101 57 1 14 114 81 180 7.89e-24 97.4
MsG0480020167.01.T01 AT5G11510 35.922 103 64 2 12 113 27 128 1.10e-14 71.2
MsG0480020167.01.T01 AT5G11510 42.574 101 57 1 14 114 81 180 7.89e-24 97.4
MsG0480020167.01.T01 AT5G11510 35.922 103 64 2 12 113 27 128 1.10e-14 71.2
MsG0480020167.01.T01 AT2G39880 46.429 112 53 3 8 114 40 149 8.91e-24 95.9
MsG0480020167.01.T01 AT5G11510 42.574 101 57 1 14 114 81 180 9.79e-24 97.1
MsG0480020167.01.T01 AT5G11510 35.922 103 64 2 12 113 27 128 1.10e-14 71.2
MsG0480020167.01.T01 AT5G11510 42.574 101 57 1 14 114 81 180 1.09e-23 97.1
MsG0480020167.01.T01 AT5G11510 35.922 103 64 2 12 113 27 128 1.17e-14 71.2
MsG0480020167.01.T01 AT1G66380 57.746 71 30 0 44 114 7 77 1.40e-23 89.7
MsG0480020167.01.T01 AT1G17950 42.708 96 54 1 14 109 5 99 1.40e-23 93.6
MsG0480020167.01.T01 AT4G37260 44.554 101 55 1 14 114 13 112 1.75e-23 94.4
MsG0480020167.01.T01 AT3G50060 35.374 147 84 4 14 151 6 150 2.32e-23 94.0
MsG0480020167.01.T01 AT1G69560 41.176 102 57 2 9 109 102 201 5.85e-23 93.2
MsG0480020167.01.T01 AT1G69560 41.176 102 57 2 9 109 118 217 6.59e-23 93.2
MsG0480020167.01.T01 AT5G02320 40.594 101 59 1 14 114 127 226 7.15e-23 94.7
MsG0480020167.01.T01 AT5G02320 39.604 101 59 2 14 113 75 174 2.41e-17 79.0
MsG0480020167.01.T01 AT5G02320 40.594 101 59 1 14 114 127 226 7.15e-23 94.7
MsG0480020167.01.T01 AT5G02320 39.604 101 59 2 14 113 75 174 2.41e-17 79.0
MsG0480020167.01.T01 AT5G02320 40.594 101 59 1 14 114 67 166 8.65e-23 94.4
MsG0480020167.01.T01 AT5G02320 39.604 101 59 2 14 113 15 114 2.86e-17 78.6
MsG0480020167.01.T01 AT1G73410 35.669 157 90 4 14 162 6 159 9.12e-23 90.1
MsG0480020167.01.T01 AT5G58850 41.837 98 54 2 14 110 105 200 1.50e-22 93.2
MsG0480020167.01.T01 AT1G73410 43.299 97 52 2 14 109 6 100 2.05e-22 90.1
MsG0480020167.01.T01 AT4G32730 43.137 102 55 2 14 114 87 186 4.52e-22 92.4
MsG0480020167.01.T01 AT4G32730 35.088 114 62 3 12 119 33 140 5.08e-16 75.1
MsG0480020167.01.T01 AT4G32730 43.137 102 55 2 14 114 87 186 4.52e-22 92.4
MsG0480020167.01.T01 AT4G32730 35.088 114 62 3 12 119 33 140 5.08e-16 75.1
MsG0480020167.01.T01 AT4G32730 43.137 102 55 2 14 114 87 186 4.52e-22 92.4
MsG0480020167.01.T01 AT4G32730 35.088 114 62 3 12 119 33 140 5.08e-16 75.1
MsG0480020167.01.T01 AT4G32730 43.137 102 55 2 14 114 87 186 4.52e-22 92.4
MsG0480020167.01.T01 AT4G32730 35.088 114 62 3 12 119 33 140 5.08e-16 75.1
MsG0480020167.01.T01 AT1G26780 42.268 97 53 2 14 109 98 192 4.86e-22 90.1
MsG0480020167.01.T01 AT5G67300 42.574 101 57 1 14 114 6 105 4.97e-22 90.5
MsG0480020167.01.T01 AT5G14750 61.404 57 22 0 58 114 1 57 5.18e-22 86.7
MsG0480020167.01.T01 AT5G14750 61.404 57 22 0 58 114 1 57 5.18e-22 86.7
MsG0480020167.01.T01 AT4G32730 43.137 102 55 2 14 114 87 186 5.83e-22 92.0
MsG0480020167.01.T01 AT4G32730 35.088 114 62 3 12 119 33 140 5.61e-16 75.1
MsG0480020167.01.T01 AT5G17800 34.091 132 82 2 14 145 93 219 7.56e-22 90.1
MsG0480020167.01.T01 AT1G26780 42.268 97 53 2 14 109 98 192 1.03e-21 90.1
MsG0480020167.01.T01 AT5G11050 39.796 98 56 2 14 110 105 200 2.44e-21 89.7
MsG0480020167.01.T01 AT3G23250 61.404 57 22 0 58 114 1 57 5.28e-21 86.3
MsG0480020167.01.T01 AT1G66380 48.780 82 42 0 11 92 7 88 5.84e-21 83.2
MsG0480020167.01.T01 AT2G25230 39.252 107 64 1 4 110 16 121 5.84e-21 86.3
MsG0480020167.01.T01 AT4G33450 31.915 141 89 2 9 149 14 147 9.88e-21 85.9
MsG0480020167.01.T01 AT3G29020 37.500 96 59 1 14 109 65 159 6.92e-20 83.2
MsG0480020167.01.T01 AT3G29020 37.500 96 59 1 14 109 67 161 1.19e-19 84.0
MsG0480020167.01.T01 AT1G71030 51.613 62 30 0 51 112 5 66 2.09e-18 78.2
MsG0480020167.01.T01 AT1G71030 50.000 64 32 0 51 114 19 82 2.56e-18 78.6
MsG0480020167.01.T01 AT2G37630 35.385 130 78 2 17 144 7 132 2.91e-18 80.9
MsG0480020167.01.T01 AT4G00540 37.143 105 62 2 13 114 102 205 3.48e-18 80.9
MsG0480020167.01.T01 AT4G00540 32.727 110 66 2 12 113 44 153 1.51e-13 67.8
MsG0480020167.01.T01 AT4G00540 37.143 105 62 2 13 114 100 203 4.82e-18 80.5
MsG0480020167.01.T01 AT4G00540 32.727 110 66 2 12 113 42 151 1.85e-13 67.4
MsG0480020167.01.T01 AT5G40430 37.383 107 61 2 6 110 46 148 2.48e-17 77.0
MsG0480020167.01.T01 AT3G18100 38.144 97 59 1 12 108 544 639 3.53e-17 78.6
MsG0480020167.01.T01 AT3G18100 38.144 97 59 1 12 108 383 478 4.73e-17 78.2
MsG0480020167.01.T01 AT3G18100 38.144 97 59 1 12 108 496 591 4.76e-17 78.2
MsG0480020167.01.T01 AT3G18100 38.144 97 59 1 12 108 331 426 5.08e-17 77.8
MsG0480020167.01.T01 AT5G39700 33.036 112 74 1 15 126 57 167 1.84e-16 73.6
MsG0480020167.01.T01 AT1G18960 34.615 104 59 4 14 114 10 107 1.47e-15 72.8
MsG0480020167.01.T01 AT1G14350 35.294 102 65 1 16 117 27 127 2.52e-15 72.8
MsG0480020167.01.T01 AT1G14350 35.294 102 65 1 16 117 27 127 2.52e-15 72.8
MsG0480020167.01.T01 AT2G02820 34.314 102 66 1 16 117 32 132 1.41e-14 70.5
MsG0480020167.01.T01 AT2G02820 34.314 102 66 1 16 117 32 132 1.87e-14 70.5
MsG0480020167.01.T01 AT2G02820 34.314 102 66 1 16 117 32 132 2.07e-14 70.1
MsG0480020167.01.T01 AT5G59780 59.091 44 18 0 71 114 2 45 4.65e-13 63.9
MsG0480020167.01.T01 AT3G46130 59.091 44 18 0 71 114 2 45 6.30e-13 63.9
MsG0480020167.01.T01 AT4G25560 61.364 44 17 0 71 114 3 46 2.30e-12 63.2

Find 32 sgRNAs with CRISPR-Local

Find 138 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTGATTCTCACCACATTT+TGG 0.202733 4:-35431181 MsG0480020167.01.T01:CDS
GGGGAATTGACTTTATTATT+AGG 0.217281 4:+35431123 None:intergenic
GGGAATTGACTTTATTATTA+GGG 0.330601 4:+35431124 None:intergenic
CGTCAACTTCCCAGAGTTGC+AGG 0.334515 4:-35433417 MsG0480020167.01.T01:intron
AAATTTCATACCTGCAACTC+TGG 0.345265 4:+35433407 None:intergenic
TATGCAATTCCATGATCATT+TGG 0.351786 4:+35432953 None:intergenic
AGAGACATGGCCATCCTAAT+TGG 0.355193 4:-35433440 MsG0480020167.01.T01:CDS
CTGGGAAGTTGACGCCAATT+AGG 0.364715 4:+35433426 None:intergenic
ATCTCGTTGTCAGATCTTCC+AGG 0.367096 4:+35431297 None:intergenic
ACAACGAGATAAAGAATTAC+TGG 0.371052 4:-35431284 MsG0480020167.01.T01:CDS
CAAGATGTGGAAAGAGTTGT+AGG 0.421883 4:-35433038 MsG0480020167.01.T01:CDS
GCTTTGAGAATTTATGTAGA+TGG 0.441517 4:+35431256 None:intergenic
CTTATAGCTGAAAATCTGCC+TGG 0.465851 4:-35431315 MsG0480020167.01.T01:CDS
TTAACAGGTTTAGCAAGATG+TGG 0.519448 4:-35433051 MsG0480020167.01.T01:intron
ATTGACTTTATTATTAGGGT+AGG 0.527892 4:+35431128 None:intergenic
GAAGGAGGACCAAATGATCA+TGG 0.536030 4:-35432962 MsG0480020167.01.T01:CDS
GAAAGAGTTGTAGGCTGCGT+TGG 0.545215 4:-35433029 MsG0480020167.01.T01:CDS
AAAATGAACTTTCCAAAATG+TGG 0.583337 4:+35431169 None:intergenic
AGGTGCATGGAGTAAGGAAG+AGG 0.588690 4:-35433487 MsG0480020167.01.T01:CDS
AATTTCATACCTGCAACTCT+GGG 0.591654 4:+35433408 None:intergenic
GGAGTAAGGAAGAGGATCAG+AGG 0.593841 4:-35433479 MsG0480020167.01.T01:CDS
TGCGGCCAAATCTAAAACGA+GGG 0.598781 4:-35432996 MsG0480020167.01.T01:CDS
GAAGTTGACGCCAATTAGGA+TGG 0.598784 4:+35433430 None:intergenic
CTGCGGCCAAATCTAAAACG+AGG 0.614037 4:-35432997 MsG0480020167.01.T01:CDS
ACATGACTAGATGAAACTGA+GGG 0.622669 4:+35431103 None:intergenic
ACGAGGGAACTATACACAGA+AGG 0.630182 4:-35432980 MsG0480020167.01.T01:CDS
ATTGCTCACATTGAGAGACA+TGG 0.633582 4:-35433453 MsG0480020167.01.T01:CDS
TACATGACTAGATGAAACTG+AGG 0.648930 4:+35431102 None:intergenic
ATTAGGGTAGGACATTTCAG+AGG 0.652794 4:+35431140 None:intergenic
TGCGTTGGATGAATTATCTG+CGG 0.661853 4:-35433014 MsG0480020167.01.T01:CDS
AGGGAACTATACACAGAAGG+AGG 0.668267 4:-35432977 MsG0480020167.01.T01:CDS
CATGACTAGATGAAACTGAG+GGG 0.763712 4:+35431104 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGATAAAAAACATATATATT+AGG - Chr4:35432322-35432341 MsG0480020167.01.T01:intron 10.0%
!! GATATTTACATTAAAAAAAT+AGG + Chr4:35433189-35433208 None:intergenic 10.0%
!! TTATTAATAATAAATTAAGC+AGG - Chr4:35431483-35431502 MsG0480020167.01.T01:intron 10.0%
!!! AGATTTAATTATTTTTTTGA+GGG + Chr4:35431967-35431986 None:intergenic 10.0%
!!! ATCATTTAAAAACTTTTTTA+TGG - Chr4:35432447-35432466 MsG0480020167.01.T01:intron 10.0%
!!! GACATTTTTTTTATTATTAA+TGG + Chr4:35432597-35432616 None:intergenic 10.0%
!!! TAATTTTAAAGTATTTATGT+GGG + Chr4:35432568-35432587 None:intergenic 10.0%
!!! TAGATTTAATTATTTTTTTG+AGG + Chr4:35431968-35431987 None:intergenic 10.0%
!!! TTAAAATTAGTCATTTTTTT+AGG - Chr4:35432987-35433006 MsG0480020167.01.T01:CDS 10.0%
!!! TTAATTTTAAAGTATTTATG+TGG + Chr4:35432569-35432588 None:intergenic 10.0%
!! ATGTATAAAAACATTGTTTA+AGG + Chr4:35432002-35432021 None:intergenic 15.0%
!! TTAACTTATTAATACTAGAA+TGG + Chr4:35431445-35431464 None:intergenic 15.0%
!!! AAAAAATGACTAATTTTAAG+TGG + Chr4:35432986-35433005 None:intergenic 15.0%
!!! AAAAATGACTAATTTTAAGT+GGG + Chr4:35432985-35433004 None:intergenic 15.0%
!!! AATATATATGTTTTCTTAAG+AGG + Chr4:35432302-35432321 None:intergenic 15.0%
!!! CAATAGTACTTTTTTTTTAA+AGG - Chr4:35432237-35432256 MsG0480020167.01.T01:intron 15.0%
!!! GATTTAATTATTTTTTTGAG+GGG + Chr4:35431966-35431985 None:intergenic 15.0%
!!! TATTGATTACTATATTTTAG+TGG + Chr4:35432084-35432103 None:intergenic 15.0%
!!! TTTTAGTTTAGATGAATTAA+AGG - Chr4:35432120-35432139 MsG0480020167.01.T01:intron 15.0%
!! CATTAAATCAGATGATTAAT+AGG + Chr4:35433227-35433246 None:intergenic 20.0%
!! CTATTAATCATCTGATTTAA+TGG - Chr4:35433225-35433244 MsG0480020167.01.T01:intron 20.0%
!!! AAAAACTTTTTTATGGTTGT+TGG - Chr4:35432454-35432473 MsG0480020167.01.T01:intron 20.0%
!!! AGTACTTTTTTTTTAAAGGA+AGG - Chr4:35432241-35432260 MsG0480020167.01.T01:intron 20.0%
!!! TGCAATCTATTTTTTAAAAC+CGG - Chr4:35432646-35432665 MsG0480020167.01.T01:intron 20.0%
! AAAAATAATCTAACCAACTG+CGG + Chr4:35432778-35432797 None:intergenic 25.0%
! AAAATGAACTTTCCAAAATG+TGG + Chr4:35433463-35433482 None:intergenic 25.0%
! AACAAAATATGGAAGATTGA+TGG + Chr4:35431328-35431347 None:intergenic 25.0%
! AATTTGTATTCTCACTAGAA+AGG - Chr4:35432210-35432229 MsG0480020167.01.T01:intron 25.0%
! AGGAAAAACGAAAAACTTAA+AGG - Chr4:35433145-35433164 MsG0480020167.01.T01:intron 25.0%
! CTAGTATTAATAAGTTAAGC+AGG - Chr4:35431447-35431466 MsG0480020167.01.T01:intron 25.0%
! GAAACGATTCAAAAACTAAA+AGG - Chr4:35433085-35433104 MsG0480020167.01.T01:intron 25.0%
! GAAACGATTCAAAAACTTAA+AGG + Chr4:35432883-35432902 None:intergenic 25.0%
! GACAAAAATGGAACAAAAAA+AGG - Chr4:35431122-35431141 MsG0480020167.01.T01:CDS 25.0%
! TTCTCTCAAACAAAAAATGT+GGG + Chr4:35432537-35432556 None:intergenic 25.0%
! TTGATTGAACCAAATTGATA+GGG - Chr4:35432745-35432764 MsG0480020167.01.T01:intron 25.0%
! TTTGATTGAACCAAATTGAT+AGG - Chr4:35432744-35432763 MsG0480020167.01.T01:intron 25.0%
!! AAAAACATTGTTTAAGGCTT+CGG + Chr4:35431996-35432015 None:intergenic 25.0%
!! AAAAACTAAAAGGACTTGTT+TGG - Chr4:35433095-35433114 MsG0480020167.01.T01:intron 25.0%
!! AAAACTAAAAGGACTTGTTT+GGG - Chr4:35433096-35433115 MsG0480020167.01.T01:intron 25.0%
!! ATTGACTTTATTATTAGGGT+AGG + Chr4:35433504-35433523 None:intergenic 25.0%
!! ATTTTACTCTTCTCTTTAAC+AGG - Chr4:35431563-35431582 MsG0480020167.01.T01:intron 25.0%
!! GGGAATTGACTTTATTATTA+GGG + Chr4:35433508-35433527 None:intergenic 25.0%
!! TCAATCTTCCATATTTTGTT+AGG - Chr4:35431328-35431347 MsG0480020167.01.T01:intron 25.0%
!! TTTCAAACAAATCCTTTTAG+AGG + Chr4:35433069-35433088 None:intergenic 25.0%
!! TTTTTGTCAAATGCATCTAA+AGG - Chr4:35432796-35432815 MsG0480020167.01.T01:intron 25.0%
!!! AGATGAATTAAAGGTATTTG+AGG - Chr4:35432129-35432148 MsG0480020167.01.T01:intron 25.0%
!!! ATGAATTAAAGGTATTTGAG+GGG - Chr4:35432131-35432150 MsG0480020167.01.T01:intron 25.0%
!!! ATTTTTTTAGGCATGACAAA+TGG - Chr4:35432999-35433018 MsG0480020167.01.T01:CDS 25.0%
!!! GATGAATTAAAGGTATTTGA+GGG - Chr4:35432130-35432149 MsG0480020167.01.T01:intron 25.0%
!!! GTTCCATTTTTGTCAAAATA+AGG + Chr4:35431116-35431135 None:intergenic 25.0%
!!! TTGAGACTTTTGAAACTTAA+AGG + Chr4:35432854-35432873 None:intergenic 25.0%
AATAGGTCAAATGCATCTAA+AGG + Chr4:35433172-35433191 None:intergenic 30.0%
AATTGTCAATCTGTTACAGA+TGG - Chr4:35433288-35433307 MsG0480020167.01.T01:intron 30.0%
ACAACGAGATAAAGAATTAC+TGG - Chr4:35433345-35433364 MsG0480020167.01.T01:intron 30.0%
AGTTTATTTGACAACAGAGA+GGG - Chr4:35431804-35431823 MsG0480020167.01.T01:intron 30.0%
ATGGAATTGCATAAAAAGCA+TGG - Chr4:35431686-35431705 MsG0480020167.01.T01:intron 30.0%
ATTTGTCACACACTATCATA+AGG - Chr4:35432492-35432511 MsG0480020167.01.T01:intron 30.0%
CCAACTATGCTATCTATAAT+AGG + Chr4:35432914-35432933 None:intergenic 30.0%
CCTATTATAGATAGCATAGT+TGG - Chr4:35432911-35432930 MsG0480020167.01.T01:intron 30.0%
GTTCTCTCAAACAAAAAATG+TGG + Chr4:35432538-35432557 None:intergenic 30.0%
GTTGATTGAGTCTATCAATT+TGG + Chr4:35432673-35432692 None:intergenic 30.0%
TAGTTTATTTGACAACAGAG+AGG - Chr4:35431803-35431822 MsG0480020167.01.T01:intron 30.0%
TATGCAATTCCATGATCATT+TGG + Chr4:35431679-35431698 None:intergenic 30.0%
TGATTGAACCAAATTGATAG+GGG - Chr4:35432746-35432765 MsG0480020167.01.T01:intron 30.0%
! ATATTTTGTTAGGTAGTGTC+CGG - Chr4:35431338-35431357 MsG0480020167.01.T01:intron 30.0%
! GGGGAATTGACTTTATTATT+AGG + Chr4:35433509-35433528 None:intergenic 30.0%
!! ACTAATTTTAAGTGGGTGTT+AGG + Chr4:35432978-35432997 None:intergenic 30.0%
!! GCTTTGAGAATTTATGTAGA+TGG + Chr4:35433376-35433395 None:intergenic 30.0%
!! GTTTTTCGTTTTTCCTAAAG+TGG + Chr4:35433141-35433160 None:intergenic 30.0%
!!! ACTTTTTTATGGTTGTTGGT+TGG - Chr4:35432458-35432477 MsG0480020167.01.T01:intron 30.0%
!!! GCTCCTTATTTTGACAAAAA+TGG - Chr4:35431110-35431129 MsG0480020167.01.T01:CDS 30.0%
!!! TTGGGACTTTTGAAACTTAA+AGG - Chr4:35433114-35433133 MsG0480020167.01.T01:intron 30.0%
AAATTTCATACCTGCAACTC+TGG + Chr4:35431225-35431244 None:intergenic 35.0%
AATTTCATACCTGCAACTCT+GGG + Chr4:35431224-35431243 None:intergenic 35.0%
ACATGACTAGATGAAACTGA+GGG + Chr4:35433529-35433548 None:intergenic 35.0%
AGGCAATGCATAAATATGCA+AGG + Chr4:35431378-35431397 None:intergenic 35.0%
ATGCATAAATATGCAAGGTC+TGG + Chr4:35431373-35431392 None:intergenic 35.0%
CATCACAATCATCCTCTAAA+AGG - Chr4:35433054-35433073 MsG0480020167.01.T01:intron 35.0%
CTAATCTTTGGTACCAAATC+CGG - Chr4:35432950-35432969 MsG0480020167.01.T01:CDS 35.0%
GAAACTTAAAGGACCACTTT+AGG - Chr4:35433125-35433144 MsG0480020167.01.T01:intron 35.0%
GAAACTTAAAGGACCACTTT+GGG + Chr4:35433144-35433125 None:intergenic 35.0%
GCTAATAACATCACTGAATG+AGG + Chr4:35431306-35431325 None:intergenic 35.0%
GGACACTACCTAACAAAATA+TGG + Chr4:35431339-35431358 None:intergenic 35.0%
TACATGACTAGATGAAACTG+AGG + Chr4:35433530-35433549 None:intergenic 35.0%
TACCAACTGAACTAAACTCA+CGG - Chr4:35431406-35431425 MsG0480020167.01.T01:intron 35.0%
TGAAACTTAAAGGACCACTT+TGG + Chr4:35433143-35433124 None:intergenic 35.0%
TGCATAAATATGCAAGGTCT+GGG + Chr4:35431372-35431391 None:intergenic 35.0%
TGCTTCCTTGAACTAATCTT+TGG - Chr4:35432938-35432957 MsG0480020167.01.T01:CDS 35.0%
TTAACAGGTTTAGCAAGATG+TGG - Chr4:35431578-35431597 MsG0480020167.01.T01:intron 35.0%
TTGAGTCTATCAATTTGGTC+CGG + Chr4:35432668-35432687 None:intergenic 35.0%
! AAAAAAAGGTGCATGGAGTA+AGG - Chr4:35431136-35431155 MsG0480020167.01.T01:CDS 35.0%
! ATGGAACAAAAAAAGGTGCA+TGG - Chr4:35431129-35431148 MsG0480020167.01.T01:CDS 35.0%
! CATTCAGAGCTGTGTATTTT+TGG + Chr4:35431892-35431911 None:intergenic 35.0%
! TGGTACCAAAGATTAGTTCA+AGG + Chr4:35432946-35432965 None:intergenic 35.0%
!! AAAGGTATTTGAGGGGAAAT+AGG - Chr4:35432138-35432157 MsG0480020167.01.T01:intron 35.0%
!! CTCAATCAACTGATTTGAAC+CGG - Chr4:35432683-35432702 MsG0480020167.01.T01:intron 35.0%
!! GTTCAGTTGGTAAGTTAGTA+AGG + Chr4:35431398-35431417 None:intergenic 35.0%
!! GTTTTTCGTTTTTCCCAAAG+TGG - Chr4:35432827-35432846 MsG0480020167.01.T01:intron 35.0%
!! TAGTTCCCTCGTTTTAGATT+TGG + Chr4:35431641-35431660 None:intergenic 35.0%
!! TTTTATGGTTGTTGGTTGGA+AGG - Chr4:35432462-35432481 MsG0480020167.01.T01:intron 35.0%
!! TTTTTAGGCATGACAAATGG+TGG - Chr4:35433002-35433021 MsG0480020167.01.T01:CDS 35.0%
!!! ATAGCTTCACTTGTCGTTTT+TGG + Chr4:35433425-35433444 None:intergenic 35.0%
!!! TGTTGATTCTCACCACATTT+TGG - Chr4:35433448-35433467 MsG0480020167.01.T01:CDS 35.0%
AAACCAAGTAGCAAACTGAC+CGG + Chr4:35432705-35432724 None:intergenic 40.0%
ACCAACTGAACTAAACTCAC+GGG - Chr4:35431407-35431426 MsG0480020167.01.T01:intron 40.0%
ATTAGGGTAGGACATTTCAG+AGG + Chr4:35433492-35433511 None:intergenic 40.0%
ATTGCTCACATTGAGAGACA+TGG - Chr4:35431176-35431195 MsG0480020167.01.T01:CDS 40.0%
CAAGATGTGGAAAGAGTTGT+AGG - Chr4:35431591-35431610 MsG0480020167.01.T01:intron 40.0%
CATGACTAGATGAAACTGAG+GGG + Chr4:35433528-35433547 None:intergenic 40.0%
CTTATAGCTGAAAATCTGCC+TGG - Chr4:35433314-35433333 MsG0480020167.01.T01:intron 40.0%
GGTTCAAACCCCTATCAATT+TGG + Chr4:35432757-35432776 None:intergenic 40.0%
TGCGTTGGATGAATTATCTG+CGG - Chr4:35431615-35431634 MsG0480020167.01.T01:intron 40.0%
! CAACACACGATAAGCTTTGT+CGG - Chr4:35431845-35431864 MsG0480020167.01.T01:intron 40.0%
ACGAGGGAACTATACACAGA+AGG - Chr4:35431649-35431668 MsG0480020167.01.T01:intron 45.0%
AGAGACATGGCCATCCTAAT+TGG - Chr4:35431189-35431208 MsG0480020167.01.T01:CDS 45.0%
AGGGAACTATACACAGAAGG+AGG - Chr4:35431652-35431671 MsG0480020167.01.T01:intron 45.0%
ATCTCGTTGTCAGATCTTCC+AGG + Chr4:35433335-35433354 None:intergenic 45.0%
CCAACTGAACTAAACTCACG+GGG - Chr4:35431408-35431427 MsG0480020167.01.T01:intron 45.0%
GAAGGAGGACCAAATGATCA+TGG - Chr4:35431667-35431686 MsG0480020167.01.T01:intron 45.0%
GAAGTTGACGCCAATTAGGA+TGG + Chr4:35431202-35431221 None:intergenic 45.0%
TTTAAGTGGGTGTTAGGAGC+CGG + Chr4:35432972-35432991 None:intergenic 45.0%
! CGATAAGCTTTGTCGGTTGA+AGG - Chr4:35431852-35431871 MsG0480020167.01.T01:intron 45.0%
! TGCGGCCAAATCTAAAACGA+GGG - Chr4:35431633-35431652 MsG0480020167.01.T01:intron 45.0%
!! ATAAATATATAAAATTATAG+TGG - Chr4:35432422-35432441 MsG0480020167.01.T01:intron 5.0%
AGCTAAGACTCCCTCTTCGA+AGG + Chr4:35432172-35432191 None:intergenic 50.0%
AGGTGCATAGACCTTCGAAG+AGG - Chr4:35432158-35432177 MsG0480020167.01.T01:intron 50.0%
AGGTGCATGGAGTAAGGAAG+AGG - Chr4:35431142-35431161 MsG0480020167.01.T01:CDS 50.0%
ATAGGGGTTTGAACCGCAGT+TGG - Chr4:35432762-35432781 MsG0480020167.01.T01:intron 50.0%
CTGGGAAGTTGACGCCAATT+AGG + Chr4:35431206-35431225 None:intergenic 50.0%
GAAAGAGTTGTAGGCTGCGT+TGG - Chr4:35431600-35431619 MsG0480020167.01.T01:intron 50.0%
GGAGTAAGGAAGAGGATCAG+AGG - Chr4:35431150-35431169 MsG0480020167.01.T01:CDS 50.0%
GGTGCATAGACCTTCGAAGA+GGG - Chr4:35432159-35432178 MsG0480020167.01.T01:intron 50.0%
! CCCCGTGAGTTTAGTTCAGT+TGG + Chr4:35431411-35431430 None:intergenic 50.0%
! CTGCGGCCAAATCTAAAACG+AGG - Chr4:35431632-35431651 MsG0480020167.01.T01:intron 50.0%
!! GAACCGGTCAGTTTGCTACT+TGG - Chr4:35432699-35432718 MsG0480020167.01.T01:intron 50.0%
CAAGGTCTGGGTTCGAACTC+CGG + Chr4:35431360-35431379 None:intergenic 55.0%
CGTCAACTTCCCAGAGTTGC+AGG - Chr4:35431212-35431231 MsG0480020167.01.T01:CDS 55.0%
TGGGTGTTAGGAGCCGGATT+TGG + Chr4:35432966-35432985 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr4 gene 35431101 35433550 35431101 ID=MsG0480020167.01;Name=MsG0480020167.01
Chr4 mRNA 35431101 35433550 35431101 ID=MsG0480020167.01.T01;Parent=MsG0480020167.01;Name=MsG0480020167.01.T01;_AED=0.17;_eAED=0.19;_QI=0|0|0|1|1|1|3|0|168
Chr4 exon 35433418 35433550 35433418 ID=MsG0480020167.01.T01:exon:39886;Parent=MsG0480020167.01.T01
Chr4 exon 35432937 35433066 35432937 ID=MsG0480020167.01.T01:exon:39885;Parent=MsG0480020167.01.T01
Chr4 exon 35431101 35431344 35431101 ID=MsG0480020167.01.T01:exon:39884;Parent=MsG0480020167.01.T01
Chr4 CDS 35433418 35433550 35433418 ID=MsG0480020167.01.T01:cds;Parent=MsG0480020167.01.T01
Chr4 CDS 35432937 35433066 35432937 ID=MsG0480020167.01.T01:cds;Parent=MsG0480020167.01.T01
Chr4 CDS 35431101 35431344 35431101 ID=MsG0480020167.01.T01:cds;Parent=MsG0480020167.01.T01
Gene Sequence

>MsG0480020167.01.T01

ATGGTTAGAGCTCCTTATTTTGACAAAAATGGAACAAAAAAAGGTGCATGGAGTAAGGAAGAGGATCAGAGGCTTATTGCTCACATTGAGAGACATGGCCATCCTAATTGGCGTCAACTTCCCAGAGTTGCAGGTTTAGCAAGATGTGGAAAGAGTTGTAGGCTGCGTTGGATGAATTATCTGCGGCCAAATCTAAAACGAGGGAACTATACACAGAAGGAGGACCAAATGATCATGGAATTGCATAAAAAGCATGGAAATAAATGGTCTCTTATAGCTGAAAATCTGCCTGGAAGATCTGACAACGAGATAAAGAATTACTGGCACAGCCATCTACATAAATTCTCAAAGCGCAATGACACTAAAGAGATTGAAAGTCCAAAAACGACAAGTGAAGCTATTAGTGTTGATTCTCACCACATTTTGGAAAGTTCATTTTCAATGTCCTCTGAAATGTCCTACCCTAATAATAAAGTCAATTCCCCTCAGTTTCATCTAGTCATGTAG

Protein sequence

>MsG0480020167.01.T01

MVRAPYFDKNGTKKGAWSKEEDQRLIAHIERHGHPNWRQLPRVAGLARCGKSCRLRWMNYLRPNLKRGNYTQKEDQMIMELHKKHGNKWSLIAENLPGRSDNEIKNYWHSHLHKFSKRNDTKEIESPKTTSEAISVDSHHILESSFSMSSEMSYPNNKVNSPQFHLVM*