Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020547.01.T01 | XP_003606132.1 | 94.118 | 170 | 6 | 2 | 1 | 166 | 1 | 170 | 6.55E-111 | 323 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020547.01.T01 | Q9ZNU9 | 56.627 | 166 | 69 | 2 | 1 | 166 | 1 | 163 | 9.93E-55 | 173 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020547.01.T01 | G7JIG0 | 94.118 | 170 | 6 | 2 | 1 | 166 | 1 | 170 | 3.13e-111 | 323 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180003337.01 | MsG0480020547.01 | 0.807813 | 4.207478e-50 | 2.366489e-47 |
| MsG0280011457.01 | MsG0480020547.01 | 0.802909 | 4.485602e-49 | 2.223802e-46 |
| MsG0480020411.01 | MsG0480020547.01 | 0.817212 | 3.706368e-52 | 2.682540e-49 |
| MsG0480020547.01 | MsG0680033623.01 | 0.839824 | 1.257877e-57 | 1.757856e-54 |
| MsG0480020547.01 | MsG0780037599.01 | 0.816997 | 4.143370e-52 | 2.981408e-49 |
| MsG0480020547.01 | MsG0780040353.01 | 0.801476 | 8.845717e-49 | 4.228429e-46 |
| MsG0480020547.01 | MsG0880041883.01 | 0.818701 | 1.708449e-52 | 1.288100e-49 |
| MsG0380014947.01 | MsG0480020547.01 | 0.834669 | 2.622902e-56 | 3.133907e-53 |
| MsG0480018160.01 | MsG0480020547.01 | 0.800939 | 1.138965e-48 | 5.371330e-46 |
| MsG0480018333.01 | MsG0480020547.01 | 0.821662 | 3.583698e-53 | 2.933915e-50 |
| MsG0280007071.01 | MsG0480020547.01 | 0.802034 | 6.795438e-49 | 3.294559e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0780041105.01 | MsG0480020547.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020547.01.T01 | MTR_4g053440 | 94.118 | 170 | 6 | 2 | 1 | 166 | 1 | 170 | 7.93e-115 | 323 |
| MsG0480020547.01.T01 | MTR_2g086190 | 57.229 | 166 | 55 | 3 | 1 | 166 | 1 | 150 | 8.97e-59 | 180 |
| MsG0480020547.01.T01 | MTR_7g104320 | 51.136 | 176 | 68 | 4 | 1 | 166 | 1 | 168 | 2.58e-57 | 177 |
| MsG0480020547.01.T01 | MTR_1g060380 | 50.292 | 171 | 65 | 4 | 1 | 166 | 1 | 156 | 4.40e-47 | 150 |
| MsG0480020547.01.T01 | MTR_2g098160 | 41.520 | 171 | 83 | 5 | 7 | 166 | 8 | 172 | 1.42e-40 | 134 |
| MsG0480020547.01.T01 | MTR_0249s0070 | 42.012 | 169 | 89 | 5 | 3 | 166 | 5 | 169 | 3.95e-39 | 131 |
| MsG0480020547.01.T01 | MTR_0249s0070 | 42.012 | 169 | 89 | 5 | 3 | 166 | 13 | 177 | 4.98e-39 | 131 |
| MsG0480020547.01.T01 | MTR_7g092400 | 39.011 | 182 | 79 | 5 | 3 | 166 | 93 | 260 | 1.37e-37 | 129 |
| MsG0480020547.01.T01 | MTR_7g114920 | 40.789 | 152 | 63 | 5 | 13 | 163 | 5 | 130 | 2.54e-31 | 110 |
| MsG0480020547.01.T01 | MTR_4g065570 | 37.931 | 145 | 75 | 3 | 28 | 166 | 2 | 137 | 9.14e-31 | 108 |
| MsG0480020547.01.T01 | MTR_1g100773 | 39.073 | 151 | 74 | 4 | 13 | 163 | 5 | 137 | 5.99e-30 | 107 |
| MsG0480020547.01.T01 | MTR_3g028010 | 33.766 | 154 | 84 | 2 | 13 | 166 | 28 | 163 | 1.97e-24 | 93.2 |
| MsG0480020547.01.T01 | MTR_8g036980 | 56.452 | 62 | 27 | 0 | 105 | 166 | 90 | 151 | 1.74e-22 | 88.2 |
| MsG0480020547.01.T01 | MTR_2g054650 | 38.158 | 152 | 60 | 7 | 13 | 163 | 6 | 124 | 1.03e-19 | 80.1 |
| MsG0480020547.01.T01 | MTR_3g025570 | 54.545 | 44 | 20 | 0 | 101 | 144 | 4 | 47 | 6.71e-12 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480020547.01.T01 | AT2G27580 | 56.627 | 166 | 69 | 2 | 1 | 166 | 1 | 163 | 1.01e-55 | 173 |
| MsG0480020547.01.T01 | AT2G27580 | 56.627 | 166 | 69 | 2 | 1 | 166 | 1 | 163 | 1.01e-55 | 173 |
| MsG0480020547.01.T01 | AT2G36320 | 49.405 | 168 | 76 | 2 | 1 | 166 | 1 | 161 | 9.90e-52 | 162 |
| MsG0480020547.01.T01 | AT1G12440 | 45.806 | 155 | 81 | 1 | 12 | 166 | 17 | 168 | 1.55e-45 | 147 |
| MsG0480020547.01.T01 | AT1G12440 | 45.806 | 155 | 81 | 1 | 12 | 166 | 17 | 168 | 1.55e-45 | 147 |
| MsG0480020547.01.T01 | AT1G12440 | 45.806 | 155 | 81 | 1 | 12 | 166 | 17 | 168 | 1.55e-45 | 147 |
| MsG0480020547.01.T01 | AT3G52800 | 48.276 | 174 | 78 | 3 | 1 | 166 | 1 | 170 | 3.17e-43 | 141 |
| MsG0480020547.01.T01 | AT3G52800 | 48.276 | 174 | 78 | 3 | 1 | 166 | 1 | 170 | 3.17e-43 | 141 |
| MsG0480020547.01.T01 | AT4G12040 | 43.529 | 170 | 70 | 4 | 12 | 166 | 17 | 175 | 5.34e-42 | 138 |
| MsG0480020547.01.T01 | AT4G12040 | 43.529 | 170 | 70 | 4 | 12 | 166 | 17 | 175 | 5.34e-42 | 138 |
| MsG0480020547.01.T01 | AT4G22820 | 44.099 | 161 | 80 | 4 | 12 | 166 | 20 | 176 | 1.02e-41 | 138 |
| MsG0480020547.01.T01 | AT4G22820 | 44.099 | 161 | 80 | 4 | 12 | 166 | 20 | 176 | 1.02e-41 | 138 |
| MsG0480020547.01.T01 | AT1G51200 | 44.099 | 161 | 81 | 4 | 12 | 166 | 16 | 173 | 1.20e-37 | 127 |
| MsG0480020547.01.T01 | AT1G51200 | 44.099 | 161 | 81 | 4 | 12 | 166 | 16 | 173 | 1.20e-37 | 127 |
| MsG0480020547.01.T01 | AT1G51200 | 44.099 | 161 | 81 | 4 | 12 | 166 | 16 | 173 | 1.20e-37 | 127 |
| MsG0480020547.01.T01 | AT1G51200 | 44.099 | 161 | 81 | 4 | 12 | 166 | 16 | 173 | 1.20e-37 | 127 |
| MsG0480020547.01.T01 | AT3G12630 | 34.211 | 152 | 74 | 4 | 19 | 166 | 31 | 160 | 1.66e-24 | 93.6 |
| MsG0480020547.01.T01 | AT4G25380 | 34.641 | 153 | 68 | 6 | 14 | 166 | 10 | 130 | 4.19e-23 | 89.0 |
| MsG0480020547.01.T01 | AT4G14225 | 31.613 | 155 | 69 | 2 | 13 | 166 | 7 | 125 | 2.91e-20 | 81.6 |
Find 55 sgRNAs with CRISPR-Local
Find 63 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGTTCTTCATCTGCAAAAT+TGG | 0.253435 | 4:-43225517 | MsG0480020547.01.T01:CDS |
| CTGCATGTCCCACACCTATT+TGG | 0.276997 | 4:+43225333 | None:intergenic |
| GCTAACAACTGCGGTTTCTT+TGG | 0.331458 | 4:-43225600 | MsG0480020547.01.T01:CDS |
| CACCTATTTGGCTGGACCTT+CGG | 0.347652 | 4:+43225345 | None:intergenic |
| TATCCGGAGCAGCACGGTTG+TGG | 0.350405 | 4:-43225246 | MsG0480020547.01.T01:CDS |
| CTGCAAATCACGGTAACATT+TGG | 0.369389 | 4:+43225551 | None:intergenic |
| AGCTTCTCTCCCTTCACCAC+TGG | 0.384998 | 4:+43225177 | None:intergenic |
| GTGGAGTTGGTAGCTGCTGC+TGG | 0.406487 | 4:-43225387 | MsG0480020547.01.T01:CDS |
| CACCGAAGGTCCAGCCAAAT+AGG | 0.408383 | 4:-43225347 | MsG0480020547.01.T01:CDS |
| TGGGACATGCAGACGGCGCG+TGG | 0.435856 | 4:-43225322 | MsG0480020547.01.T01:CDS |
| GTGTGGGACCCACAGGTATC+CGG | 0.436288 | 4:-43225262 | MsG0480020547.01.T01:CDS |
| ACTGTTGAGGAATCAACGTT+TGG | 0.447132 | 4:+43225487 | None:intergenic |
| GAGCAAAGATCTTGCATGGC+AGG | 0.449620 | 4:+43225573 | None:intergenic |
| AACCCACAACCGTGCTGCTC+CGG | 0.450007 | 4:+43225243 | None:intergenic |
| GGTAGCTGCTGCTGGACCTT+CGG | 0.453896 | 4:-43225379 | MsG0480020547.01.T01:CDS |
| AGACGGCGCGTGGGGCTGAC+AGG | 0.473736 | 4:-43225312 | MsG0480020547.01.T01:CDS |
| ATGTCCCACACCTATTTGGC+TGG | 0.481879 | 4:+43225337 | None:intergenic |
| ATCCGGAGCAGCACGGTTGT+GGG | 0.489485 | 4:-43225245 | MsG0480020547.01.T01:CDS |
| CACAAAGACGTTGAGCAGCT+TGG | 0.496369 | 4:+43225622 | None:intergenic |
| TTACCGTGATTTGCAGATGA+AGG | 0.514621 | 4:-43225544 | MsG0480020547.01.T01:CDS |
| ACTACAACCGACGGTGGAGA+TGG | 0.535288 | 4:+43225429 | None:intergenic |
| CGTGCTGCTCCGGATACCTG+TGG | 0.543879 | 4:+43225253 | None:intergenic |
| GAAGGCGAATCCAGTGGTGA+AGG | 0.546816 | 4:-43225187 | MsG0480020547.01.T01:CDS |
| ATCTACACCGACGGTGGAGT+TGG | 0.547793 | 4:-43225400 | MsG0480020547.01.T01:CDS |
| TGACGTTGTGTGGGACCCAC+AGG | 0.547943 | 4:-43225269 | MsG0480020547.01.T01:CDS |
| CAGGATTTAAGTGTCGGTGC+GGG | 0.548307 | 4:-43225293 | MsG0480020547.01.T01:CDS |
| CGGTGCGGGTTGACGTTGTG+TGG | 0.556113 | 4:-43225279 | MsG0480020547.01.T01:CDS |
| TTCGGTGGTTCAGCCTCCGA+AGG | 0.562954 | 4:+43225363 | None:intergenic |
| CAAGAAGAATTAGACTGTTG+AGG | 0.566912 | 4:+43225474 | None:intergenic |
| GGCTGACAGGATTTAAGTGT+CGG | 0.567077 | 4:-43225299 | MsG0480020547.01.T01:CDS |
| CTATTTGGCTGGACCTTCGG+TGG | 0.568326 | 4:+43225348 | None:intergenic |
| AGCTGCTGCTGGACCTTCGG+AGG | 0.570808 | 4:-43225376 | MsG0480020547.01.T01:CDS |
| TTTGGAGCAAAGATCTTGCA+TGG | 0.576644 | 4:+43225569 | None:intergenic |
| GGGACATGCAGACGGCGCGT+GGG | 0.582538 | 4:-43225321 | MsG0480020547.01.T01:CDS |
| GGACATGCAGACGGCGCGTG+GGG | 0.594994 | 4:-43225320 | MsG0480020547.01.T01:CDS |
| GTGCTGCTCCGGATACCTGT+GGG | 0.602557 | 4:+43225254 | None:intergenic |
| GTTCCTTCATCTGCAAATCA+CGG | 0.602813 | 4:+43225541 | None:intergenic |
| AAGGTCCAGCCAAATAGGTG+TGG | 0.606672 | 4:-43225342 | MsG0480020547.01.T01:CDS |
| TATTCATCCATCTCCACCGT+CGG | 0.610000 | 4:-43225436 | MsG0480020547.01.T01:CDS |
| AAGGCGAATCCAGTGGTGAA+GGG | 0.610190 | 4:-43225186 | MsG0480020547.01.T01:CDS |
| AGGTCCAGCCAAATAGGTGT+GGG | 0.616831 | 4:-43225341 | MsG0480020547.01.T01:CDS |
| ACAGGATTTAAGTGTCGGTG+CGG | 0.618927 | 4:-43225294 | MsG0480020547.01.T01:CDS |
| TTCGGAGGCTGAACCACCGA+AGG | 0.620244 | 4:-43225361 | MsG0480020547.01.T01:CDS |
| TAATTCTTCTTGTCTAGACA+CGG | 0.623144 | 4:-43225463 | MsG0480020547.01.T01:CDS |
| GGTGCGGGTTGACGTTGTGT+GGG | 0.623964 | 4:-43225278 | MsG0480020547.01.T01:CDS |
| CGTCTTTGTGCTAACAACTG+CGG | 0.629379 | 4:-43225609 | MsG0480020547.01.T01:CDS |
| GCAGCTACCAACTCCACCGT+CGG | 0.632431 | 4:+43225393 | None:intergenic |
| ATAGGTGTGGGACATGCAGA+CGG | 0.635820 | 4:-43225329 | MsG0480020547.01.T01:CDS |
| AGTTTCTTCATCTACACCGA+CGG | 0.637393 | 4:-43225409 | MsG0480020547.01.T01:CDS |
| TTCTTCATCTACACCGACGG+TGG | 0.645268 | 4:-43225406 | MsG0480020547.01.T01:CDS |
| GGGAAGGGAGGAGATCAAGA+AGG | 0.649649 | 4:-43225205 | MsG0480020547.01.T01:CDS |
| CACAGGTATCCGGAGCAGCA+CGG | 0.653832 | 4:-43225252 | MsG0480020547.01.T01:CDS |
| GATCAAGAAGGCGAATCCAG+TGG | 0.675101 | 4:-43225193 | MsG0480020547.01.T01:CDS |
| GATGAAGAAACTACAACCGA+CGG | 0.679990 | 4:+43225420 | None:intergenic |
| GAAGAAACTACAACCGACGG+TGG | 0.716652 | 4:+43225423 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| TAATTCTTCTTGTCTAGACA+CGG | - | Chr4:43225343-43225362 | MsG0480020547.01.T01:CDS | 30.0% | |
| ACGTTCTTCATCTGCAAAAT+TGG | - | Chr4:43225289-43225308 | MsG0480020547.01.T01:CDS | 35.0% | |
| CAAGAAGAATTAGACTGTTG+AGG | + | Chr4:43225335-43225354 | None:intergenic | 35.0% | |
| !! | GGTTGTGGGTTTGATTTTAA+GGG | - | Chr4:43225575-43225594 | MsG0480020547.01.T01:CDS | 35.0% |
| !! | GTTGTGGGTTTGATTTTAAG+GGG | - | Chr4:43225576-43225595 | MsG0480020547.01.T01:CDS | 35.0% |
| ACTGTTGAGGAATCAACGTT+TGG | + | Chr4:43225322-43225341 | None:intergenic | 40.0% | |
| AGTTTCTTCATCTACACCGA+CGG | - | Chr4:43225397-43225416 | MsG0480020547.01.T01:CDS | 40.0% | |
| CTGCAAATCACGGTAACATT+TGG | + | Chr4:43225258-43225277 | None:intergenic | 40.0% | |
| GATGAAGAAACTACAACCGA+CGG | + | Chr4:43225389-43225408 | None:intergenic | 40.0% | |
| GTTCCTTCATCTGCAAATCA+CGG | + | Chr4:43225268-43225287 | None:intergenic | 40.0% | |
| ! | TTACCGTGATTTGCAGATGA+AGG | - | Chr4:43225262-43225281 | MsG0480020547.01.T01:CDS | 40.0% |
| ! | TTTGGAGCAAAGATCTTGCA+TGG | + | Chr4:43225240-43225259 | None:intergenic | 40.0% |
| !! | CGGTTGTGGGTTTGATTTTA+AGG | - | Chr4:43225574-43225593 | MsG0480020547.01.T01:CDS | 40.0% |
| !! | GGGTTTGATTTTAAGGGGAT+GGG | - | Chr4:43225581-43225600 | MsG0480020547.01.T01:CDS | 40.0% |
| !! | TGATTTTAAGGGGATGGGAA+GGG | - | Chr4:43225586-43225605 | MsG0480020547.01.T01:CDS | 40.0% |
| !! | TGGGTTTGATTTTAAGGGGA+TGG | - | Chr4:43225580-43225599 | MsG0480020547.01.T01:CDS | 40.0% |
| !! | TTGATTTTAAGGGGATGGGA+AGG | - | Chr4:43225585-43225604 | MsG0480020547.01.T01:CDS | 40.0% |
| CGTCTTTGTGCTAACAACTG+CGG | - | Chr4:43225197-43225216 | MsG0480020547.01.T01:CDS | 45.0% | |
| GCTAACAACTGCGGTTTCTT+TGG | - | Chr4:43225206-43225225 | MsG0480020547.01.T01:CDS | 45.0% | |
| GGCTGACAGGATTTAAGTGT+CGG | - | Chr4:43225507-43225526 | MsG0480020547.01.T01:CDS | 45.0% | |
| TATTCATCCATCTCCACCGT+CGG | - | Chr4:43225370-43225389 | MsG0480020547.01.T01:CDS | 45.0% | |
| !! | ACAGGATTTAAGTGTCGGTG+CGG | - | Chr4:43225512-43225531 | MsG0480020547.01.T01:CDS | 45.0% |
| AAGGCGAATCCAGTGGTGAA+GGG | - | Chr4:43225620-43225639 | MsG0480020547.01.T01:CDS | 50.0% | |
| AAGGTCCAGCCAAATAGGTG+TGG | - | Chr4:43225464-43225483 | MsG0480020547.01.T01:CDS | 50.0% | |
| AGGTCCAGCCAAATAGGTGT+GGG | - | Chr4:43225465-43225484 | MsG0480020547.01.T01:CDS | 50.0% | |
| ATAGGTGTGGGACATGCAGA+CGG | - | Chr4:43225477-43225496 | MsG0480020547.01.T01:CDS | 50.0% | |
| ATGTCCCACACCTATTTGGC+TGG | + | Chr4:43225472-43225491 | None:intergenic | 50.0% | |
| CACAAAGACGTTGAGCAGCT+TGG | + | Chr4:43225187-43225206 | None:intergenic | 50.0% | |
| CACCTATTTGGCTGGACCTT+CGG | + | Chr4:43225464-43225483 | None:intergenic | 50.0% | |
| CTGCATGTCCCACACCTATT+TGG | + | Chr4:43225476-43225495 | None:intergenic | 50.0% | |
| GAAGAAACTACAACCGACGG+TGG | + | Chr4:43225386-43225405 | None:intergenic | 50.0% | |
| GAGCAAAGATCTTGCATGGC+AGG | + | Chr4:43225236-43225255 | None:intergenic | 50.0% | |
| GATCAAGAAGGCGAATCCAG+TGG | - | Chr4:43225613-43225632 | MsG0480020547.01.T01:CDS | 50.0% | |
| TTCTTCATCTACACCGACGG+TGG | - | Chr4:43225400-43225419 | MsG0480020547.01.T01:CDS | 50.0% | |
| !! | CAGGATTTAAGTGTCGGTGC+GGG | - | Chr4:43225513-43225532 | MsG0480020547.01.T01:CDS | 50.0% |
| !! | TTTTAAGGGGATGGGAAGGG+AGG | - | Chr4:43225589-43225608 | MsG0480020547.01.T01:CDS | 50.0% |
| ACTACAACCGACGGTGGAGA+TGG | + | Chr4:43225380-43225399 | None:intergenic | 55.0% | |
| AGCTTCTCTCCCTTCACCAC+TGG | + | Chr4:43225632-43225651 | None:intergenic | 55.0% | |
| ATCTACACCGACGGTGGAGT+TGG | - | Chr4:43225406-43225425 | MsG0480020547.01.T01:CDS | 55.0% | |
| CACCGAAGGTCCAGCCAAAT+AGG | - | Chr4:43225459-43225478 | MsG0480020547.01.T01:CDS | 55.0% | |
| CTATTTGGCTGGACCTTCGG+TGG | + | Chr4:43225461-43225480 | None:intergenic | 55.0% | |
| GAAGGCGAATCCAGTGGTGA+AGG | - | Chr4:43225619-43225638 | MsG0480020547.01.T01:CDS | 55.0% | |
| GGGAAGGGAGGAGATCAAGA+AGG | - | Chr4:43225601-43225620 | MsG0480020547.01.T01:CDS | 55.0% | |
| ATCCGGAGCAGCACGGTTGT+GGG | - | Chr4:43225561-43225580 | MsG0480020547.01.T01:CDS | 60.0% | |
| CACAGGTATCCGGAGCAGCA+CGG | - | Chr4:43225554-43225573 | MsG0480020547.01.T01:CDS | 60.0% | |
| GCAGCTACCAACTCCACCGT+CGG | + | Chr4:43225416-43225435 | None:intergenic | 60.0% | |
| GGTAGCTGCTGCTGGACCTT+CGG | - | Chr4:43225427-43225446 | MsG0480020547.01.T01:CDS | 60.0% | |
| GTGTGGGACCCACAGGTATC+CGG | - | Chr4:43225544-43225563 | MsG0480020547.01.T01:CDS | 60.0% | |
| TATCCGGAGCAGCACGGTTG+TGG | - | Chr4:43225560-43225579 | MsG0480020547.01.T01:CDS | 60.0% | |
| TGACGTTGTGTGGGACCCAC+AGG | - | Chr4:43225537-43225556 | MsG0480020547.01.T01:CDS | 60.0% | |
| TTCGGAGGCTGAACCACCGA+AGG | - | Chr4:43225445-43225464 | MsG0480020547.01.T01:CDS | 60.0% | |
| TTCGGTGGTTCAGCCTCCGA+AGG | + | Chr4:43225446-43225465 | None:intergenic | 60.0% | |
| ! | AACCCACAACCGTGCTGCTC+CGG | + | Chr4:43225566-43225585 | None:intergenic | 60.0% |
| ! | GGTGCGGGTTGACGTTGTGT+GGG | - | Chr4:43225528-43225547 | MsG0480020547.01.T01:CDS | 60.0% |
| ! | GTGCTGCTCCGGATACCTGT+GGG | + | Chr4:43225555-43225574 | None:intergenic | 60.0% |
| !! | GTGGAGTTGGTAGCTGCTGC+TGG | - | Chr4:43225419-43225438 | MsG0480020547.01.T01:CDS | 60.0% |
| AGCTGCTGCTGGACCTTCGG+AGG | - | Chr4:43225430-43225449 | MsG0480020547.01.T01:CDS | 65.0% | |
| ! | CGGTGCGGGTTGACGTTGTG+TGG | - | Chr4:43225527-43225546 | MsG0480020547.01.T01:CDS | 65.0% |
| ! | CGTGCTGCTCCGGATACCTG+TGG | + | Chr4:43225556-43225575 | None:intergenic | 65.0% |
| GGACATGCAGACGGCGCGTG+GGG | - | Chr4:43225486-43225505 | MsG0480020547.01.T01:CDS | 70.0% | |
| GGGACATGCAGACGGCGCGT+GGG | - | Chr4:43225485-43225504 | MsG0480020547.01.T01:CDS | 70.0% | |
| TGGGACATGCAGACGGCGCG+TGG | - | Chr4:43225484-43225503 | MsG0480020547.01.T01:CDS | 70.0% | |
| AGACGGCGCGTGGGGCTGAC+AGG | - | Chr4:43225494-43225513 | MsG0480020547.01.T01:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 43225164 | 43225664 | 43225164 | ID=MsG0480020547.01;Name=MsG0480020547.01 |
| Chr4 | mRNA | 43225164 | 43225664 | 43225164 | ID=MsG0480020547.01.T01;Parent=MsG0480020547.01;Name=MsG0480020547.01.T01;_AED=0.46;_eAED=0.46;_QI=0|-1|0|1|-1|1|1|0|166 |
| Chr4 | exon | 43225164 | 43225664 | 43225164 | ID=MsG0480020547.01.T01:exon:15645;Parent=MsG0480020547.01.T01 |
| Chr4 | CDS | 43225164 | 43225664 | 43225164 | ID=MsG0480020547.01.T01:cds;Parent=MsG0480020547.01.T01 |
| Gene Sequence |
| Protein sequence |
