AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022053.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022053.01.T01 MTR_4g081380 78.065 155 5 1 1 155 1 126 3.83e-82 238
MsG0480022053.01.T01 MTR_2g082590 59.603 151 45 1 1 151 1 135 1.57e-59 181
MsG0480022053.01.T01 MTR_2g082590 57.616 151 35 1 1 151 1 122 8.91e-57 174
MsG0480022053.01.T01 MTR_2g010750 47.619 147 48 1 6 152 5 122 4.59e-43 139
MsG0480022053.01.T01 MTR_4g081380 68.269 104 4 1 1 104 1 75 6.43e-42 135
MsG0480022053.01.T01 MTR_7g009070 44.304 79 44 0 64 142 51 129 2.94e-21 84.0
MsG0480022053.01.T01 MTR_2g010750 41.346 104 32 1 6 109 5 79 9.95e-21 81.3
MsG0480022053.01.T01 MTR_5g021180 43.373 83 47 0 64 146 33 115 5.54e-19 77.8
MsG0480022053.01.T01 MTR_1g023140 44.737 76 42 0 64 139 31 106 3.16e-18 75.9
MsG0480022053.01.T01 MTR_8g005320 37.975 79 49 0 64 142 51 129 3.74e-17 73.6
MsG0480022053.01.T01 MTR_3g112410 43.421 76 43 0 64 139 31 106 5.80e-17 72.4
MsG0480022053.01.T01 MTR_8g006685 37.975 79 49 0 64 142 120 198 1.00e-16 73.9
MsG0480022053.01.T01 MTR_8g006560 37.975 79 49 0 64 142 120 198 1.00e-16 73.9
MsG0480022053.01.T01 MTR_7g073680 37.975 79 49 0 64 142 49 127 1.84e-16 71.6
MsG0480022053.01.T01 MTR_5g037950 45.000 80 44 0 64 143 44 123 4.20e-16 70.5
MsG0480022053.01.T01 MTR_8g107460 35.443 79 51 0 64 142 279 357 7.52e-15 70.9
MsG0480022053.01.T01 MTR_5g037930 38.095 84 52 0 64 147 45 128 5.45e-13 62.4
MsG0480022053.01.T01 MTR_5g037890 37.500 80 50 0 64 143 43 122 2.28e-12 60.8
MsG0480022053.01.T01 MTR_1g098660 33.721 86 55 2 64 147 81 166 7.34e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022053.01.T01 AT1G11530 46.099 141 47 1 10 150 2 113 4.83e-42 136
MsG0480022053.01.T01 AT3G51030 50.000 76 38 0 64 139 31 106 3.78e-20 80.5
MsG0480022053.01.T01 AT1G45145 40.506 79 47 0 64 142 30 108 1.70e-19 79.0
MsG0480022053.01.T01 AT5G39950 40.506 79 47 0 64 142 50 128 1.38e-17 74.7
MsG0480022053.01.T01 AT3G08710 39.326 89 54 0 64 152 48 136 2.48e-17 73.9
MsG0480022053.01.T01 AT3G08710 39.326 89 54 0 64 152 48 136 2.48e-17 73.9
MsG0480022053.01.T01 AT3G08710 39.326 89 54 0 64 152 48 136 2.48e-17 73.9
MsG0480022053.01.T01 AT3G56420 30.657 137 66 1 5 141 35 142 4.71e-17 73.6
MsG0480022053.01.T01 AT3G56420 30.657 137 66 1 5 141 35 142 4.71e-17 73.6
MsG0480022053.01.T01 AT3G56420 30.657 137 66 1 5 141 35 142 4.71e-17 73.6
MsG0480022053.01.T01 AT5G42980 44.000 75 42 0 64 138 30 104 1.02e-16 72.0
MsG0480022053.01.T01 AT1G59730 35.802 81 52 0 64 144 46 126 1.03e-16 72.0
MsG0480022053.01.T01 AT2G40790 28.058 139 71 1 9 147 39 148 2.13e-16 72.0
MsG0480022053.01.T01 AT2G40790 28.058 139 71 1 9 147 39 148 2.13e-16 72.0
MsG0480022053.01.T01 AT1G19730 37.500 80 49 1 64 142 31 110 6.26e-16 69.7
MsG0480022053.01.T01 AT3G17880 29.605 152 93 3 5 153 240 380 2.17e-14 69.7
MsG0480022053.01.T01 AT3G17880 29.605 152 93 3 5 153 233 373 2.25e-14 69.3
MsG0480022053.01.T01 AT1G69880 32.927 82 55 0 64 145 62 143 1.08e-13 64.7
MsG0480022053.01.T01 AT2G35010 34.884 86 54 1 62 145 107 192 8.34e-11 58.2
MsG0480022053.01.T01 AT2G35010 34.884 86 54 1 62 145 107 192 8.34e-11 58.2

Find 42 sgRNAs with CRISPR-Local

Find 118 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTATATTTAAATATTCTTTC+TGG 0.173024 4:-67439195 MsG0480022053.01.T01:three_prime_UTR
TTTAGTTGATGTATTGTAAA+AGG 0.183910 4:-67439245 MsG0480022053.01.T01:three_prime_UTR
ACTTACAAGGCAACCTTTAT+TGG 0.239798 4:+67440886 None:intergenic
CATAAAATATTTGCAGGTTA+TGG 0.264928 4:-67440726 MsG0480022053.01.T01:CDS
GAACCCTTTCTTTGAAGAAT+TGG 0.305687 4:-67440663 MsG0480022053.01.T01:CDS
GTGCAAATCCTGATGAAATT+AGG 0.320699 4:-67439506 MsG0480022053.01.T01:CDS
TTTGTTCATAAAATATTTGC+AGG 0.348565 4:-67440732 MsG0480022053.01.T01:CDS
TCCTCCACTCATCAACAAAA+AGG 0.360970 4:+67439551 None:intergenic
ATCACTGAAGCTACCAATAA+AGG 0.364334 4:-67440899 MsG0480022053.01.T01:CDS
GTGATTTGGAGGAATGAGTT+TGG 0.374475 4:+67439460 None:intergenic
CATGGCATTGATTTCCAACT+TGG 0.380007 4:+67439578 None:intergenic
CATCATCCATCAGAGTGATT+TGG 0.391841 4:+67439446 None:intergenic
GGTGGATGTGGACGAAGTTA+AGG 0.395797 4:-67440609 MsG0480022053.01.T01:intron
ATTATTTGTAAAATTATGTT+TGG 0.395812 4:-67439295 MsG0480022053.01.T01:three_prime_UTR
TGTAATAATATACATTCTAA+TGG 0.426583 4:-67439335 MsG0480022053.01.T01:three_prime_UTR
TTAGTTGATGTATTGTAAAA+GGG 0.436747 4:-67439244 MsG0480022053.01.T01:three_prime_UTR
GGCATTGATTTCCAACTTGG+AGG 0.441850 4:+67439581 None:intergenic
CAGAAAGAGGACATCTTGAT+AGG 0.447661 4:+67440634 None:intergenic
AAAGGGTTCATAGCAATAGA+AGG 0.450955 4:+67440677 None:intergenic
GATGCCAATTCTTCAAAGAA+AGG 0.458372 4:+67440659 None:intergenic
CCTCTTTCTGAAGGTGGATG+TGG 0.473122 4:-67440621 MsG0480022053.01.T01:CDS
GCACCAACAGCTTTCTCCAC+TGG 0.488674 4:+67439525 None:intergenic
AATATACATTCTAATGGTAC+TGG 0.490900 4:-67439329 MsG0480022053.01.T01:three_prime_UTR
CCACATCCACCTTCAGAAAG+AGG 0.505638 4:+67440621 None:intergenic
ATCCTGATGAAATTAGGAAA+AGG 0.511549 4:-67439500 MsG0480022053.01.T01:CDS
CATCCATCAGAGTGATTTGG+AGG 0.522008 4:+67439449 None:intergenic
ATTCCTCCAAATCACTCTGA+TGG 0.522941 4:-67439452 MsG0480022053.01.T01:exon
ATGCCAATTCTTCAAAGAAA+GGG 0.531001 4:+67440660 None:intergenic
AAATTGACTCAAGAAAATCA+TGG 0.550454 4:-67440931 MsG0480022053.01.T01:CDS
AATTGACTCAAGAAAATCAT+GGG 0.553360 4:-67440930 MsG0480022053.01.T01:CDS
TATTGGTAGCTTCAGTGATG+TGG 0.558401 4:+67440903 None:intergenic
TCAAGATGTCCTCTTTCTGA+AGG 0.562276 4:-67440630 MsG0480022053.01.T01:CDS
TTGTAAAATTATGTTTGGTG+TGG 0.565479 4:-67439290 MsG0480022053.01.T01:three_prime_UTR
AGATGTCCTCTTTCTGAAGG+TGG 0.570239 4:-67440627 MsG0480022053.01.T01:CDS
TGATGAAATTAGGAAAAGGA+TGG 0.577508 4:-67439496 MsG0480022053.01.T01:CDS
TAGAATGTATATTATTACAC+AGG 0.591800 4:+67439339 None:intergenic
CTAGGAAGTAGCCTCCAAGT+TGG 0.602024 4:-67439592 MsG0480022053.01.T01:intron
AATCCAGTGGAGAAAGCTGT+TGG 0.602305 4:-67439528 MsG0480022053.01.T01:CDS
AAAGAGGACATCTTGATAGG+TGG 0.610226 4:+67440637 None:intergenic
TAAAATTGATGATACTTACA+AGG 0.616923 4:+67440873 None:intergenic
AATAAGTAGAAAATAATGGG+TGG 0.664491 4:-67440986 None:intergenic
GATGAGTGGAGGAAATCCAG+TGG 0.727295 4:-67439541 MsG0480022053.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCTATATAGTTATATTAAT+AGG - Chr4:67439331-67439350 MsG0480022053.01.T01:three_prime_UTR 10.0%
!! ATTACATAACATATTATTAT+TGG + Chr4:67440385-67440404 None:intergenic 10.0%
!! ATTATTTGTAAAATTATGTT+TGG - Chr4:67440799-67440818 MsG0480022053.01.T01:intron 10.0%
!! TAAATAAAAAAATACATGTA+GGG - Chr4:67440284-67440303 MsG0480022053.01.T01:intron 10.0%
!! AATAAACAATTTGAGAATAT+TGG + Chr4:67439878-67439897 None:intergenic 15.0%
!! CATGTAAAATTATAACAATT+GGG - Chr4:67439278-67439297 MsG0480022053.01.T01:three_prime_UTR 15.0%
!! CTAAATAAAAAAATACATGT+AGG - Chr4:67440283-67440302 MsG0480022053.01.T01:intron 15.0%
!! GTATATTTAAATATTCTTTC+TGG - Chr4:67440899-67440918 MsG0480022053.01.T01:CDS 15.0%
!! TGTAATAATATACATTCTAA+TGG - Chr4:67440759-67440778 MsG0480022053.01.T01:intron 15.0%
!! TTTAAAAACACAAATGAAAA+AGG + Chr4:67439544-67439563 None:intergenic 15.0%
!!! AATATAATTTGTGAATTTTC+TGG - Chr4:67440135-67440154 MsG0480022053.01.T01:intron 15.0%
!!! TTTTTTTTTTGTGACTAAAA+AGG + Chr4:67440952-67440971 None:intergenic 15.0%
!! AAATTATATTGAACAAAAGG+TGG + Chr4:67440125-67440144 None:intergenic 20.0%
!! ATGCCATTATTATAAGTTAA+AGG + Chr4:67439988-67440007 None:intergenic 20.0%
!! CACAAATTATATTGAACAAA+AGG + Chr4:67440128-67440147 None:intergenic 20.0%
!! GCATGTAAAATTATAACAAT+TGG - Chr4:67439277-67439296 MsG0480022053.01.T01:three_prime_UTR 20.0%
!! TAGAATGTATATTATTACAC+AGG + Chr4:67440758-67440777 None:intergenic 20.0%
!! TTTGTTCATAAAATATTTGC+AGG - Chr4:67439362-67439381 MsG0480022053.01.T01:three_prime_UTR 20.0%
!!! ATTAGTTTAGAAAATAAGCA+TGG + Chr4:67440263-67440282 None:intergenic 20.0%
!!! GAAGTTAAGGTAATTTTTTA+TGG - Chr4:67439498-67439517 MsG0480022053.01.T01:CDS 20.0%
!!! TAAAATTGATGATACTTACA+AGG + Chr4:67439224-67439243 None:intergenic 20.0%
!!! TGTAAGTATCATCAATTTTA+TGG - Chr4:67439224-67439243 MsG0480022053.01.T01:three_prime_UTR 20.0%
!!! TTAGTTGATGTATTGTAAAA+GGG - Chr4:67440850-67440869 MsG0480022053.01.T01:CDS 20.0%
!!! TTTAGTTGATGTATTGTAAA+AGG - Chr4:67440849-67440868 MsG0480022053.01.T01:CDS 20.0%
! AAACTAACATGTAGTTTCTT+TGG + Chr4:67439796-67439815 None:intergenic 25.0%
! AATATACATTCTAATGGTAC+TGG - Chr4:67440765-67440784 MsG0480022053.01.T01:intron 25.0%
! CATAAAATATTTGCAGGTTA+TGG - Chr4:67439368-67439387 MsG0480022053.01.T01:three_prime_UTR 25.0%
! TTATAACAATTGGGTGATTA+TGG - Chr4:67439287-67439306 MsG0480022053.01.T01:three_prime_UTR 25.0%
! TTGTAGATGATATCAATATG+TGG - Chr4:67440016-67440035 MsG0480022053.01.T01:intron 25.0%
!! AAATTGACTCAAGAAAATCA+TGG - Chr4:67439163-67439182 MsG0480022053.01.T01:three_prime_UTR 25.0%
!! AATTGACTCAAGAAAATCAT+GGG - Chr4:67439164-67439183 MsG0480022053.01.T01:three_prime_UTR 25.0%
!! ACGCTTTCAATTTAAAATGT+CGG + Chr4:67439605-67439624 None:intergenic 25.0%
!! ATGGAAGAAACTGTTTATTT+TGG - Chr4:67440197-67440216 MsG0480022053.01.T01:intron 25.0%
!! CTTTTATCATCATCCTTTTT+AGG - Chr4:67440055-67440074 MsG0480022053.01.T01:intron 25.0%
!! GAGCCTTTAACTTATAATAA+TGG - Chr4:67439982-67440001 MsG0480022053.01.T01:intron 25.0%
!! TTAACTAACTACCTTTTGTT+TGG - Chr4:67440452-67440471 MsG0480022053.01.T01:intron 25.0%
!! TTGTAAAATTATGTTTGGTG+TGG - Chr4:67440804-67440823 MsG0480022053.01.T01:intron 25.0%
!!! AATTTTTTATGGTCTATGGA+GGG - Chr4:67439509-67439528 MsG0480022053.01.T01:CDS 25.0%
!!! AGGTAATTTTTTATGGTCTA+TGG - Chr4:67439505-67439524 MsG0480022053.01.T01:CDS 25.0%
!!! TAATTTTTTATGGTCTATGG+AGG - Chr4:67439508-67439527 MsG0480022053.01.T01:CDS 25.0%
ATCCTGATGAAATTAGGAAA+AGG - Chr4:67440594-67440613 MsG0480022053.01.T01:intron 30.0%
ATGCCAATTCTTCAAAGAAA+GGG + Chr4:67439437-67439456 None:intergenic 30.0%
TATGATATCTCCTTCTATGT+TGG - Chr4:67439815-67439834 MsG0480022053.01.T01:intron 30.0%
TCTCCACTCAACATAAAAAT+TGG + Chr4:67440170-67440189 None:intergenic 30.0%
TGATGAAATTAGGAAAAGGA+TGG - Chr4:67440598-67440617 MsG0480022053.01.T01:intron 30.0%
! AAACTGAAAGTTTAGTTCGT+TGG + Chr4:67439676-67439695 None:intergenic 30.0%
! ATCCTTTTCCTAATTTCATC+AGG + Chr4:67440599-67440618 None:intergenic 30.0%
! ATGCCAATTTTTATGTTGAG+TGG - Chr4:67440164-67440183 MsG0480022053.01.T01:intron 30.0%
! CAGTTCAAAAAAGTACAGTT+CGG - Chr4:67439736-67439755 MsG0480022053.01.T01:intron 30.0%
!! TGGTTCATTTTTCTGCTTAT+TGG - Chr4:67439388-67439407 MsG0480022053.01.T01:three_prime_UTR 30.0%
!! TTATCATCATCCTTTTTAGG+TGG - Chr4:67440058-67440077 MsG0480022053.01.T01:intron 30.0%
!!! ATTTTTTATGGTCTATGGAG+GGG - Chr4:67439510-67439529 MsG0480022053.01.T01:CDS 30.0%
AAAGGGTTCATAGCAATAGA+AGG + Chr4:67439420-67439439 None:intergenic 35.0%
ACAACAATCATGCATCAAAG+AGG + Chr4:67440408-67440427 None:intergenic 35.0%
ACTTACAAGGCAACCTTTAT+TGG + Chr4:67439211-67439230 None:intergenic 35.0%
ATCACTGAAGCTACCAATAA+AGG - Chr4:67439195-67439214 MsG0480022053.01.T01:three_prime_UTR 35.0%
ATCTCCTTCTATGTTGGAAA+TGG - Chr4:67439821-67439840 MsG0480022053.01.T01:intron 35.0%
CATAGAACAGTCCAAACAAA+AGG + Chr4:67440466-67440485 None:intergenic 35.0%
GATGCCAATTCTTCAAAGAA+AGG + Chr4:67439438-67439457 None:intergenic 35.0%
GTGAACTAATTGTCACAGTT+CGG - Chr4:67439696-67439715 MsG0480022053.01.T01:intron 35.0%
GTGCAAATCCTGATGAAATT+AGG - Chr4:67440588-67440607 MsG0480022053.01.T01:intron 35.0%
! GAACCCTTTCTTTGAAGAAT+TGG - Chr4:67439431-67439450 MsG0480022053.01.T01:three_prime_UTR 35.0%
! TGAGTCAATTTTCACAACCT+TGG + Chr4:67439154-67439173 None:intergenic 35.0%
! TGCACGGATAATGGTATATA+TGG + Chr4:67439579-67439598 None:intergenic 35.0%
!! TGCTTTTTGTGACTCTATCT+AGG - Chr4:67440484-67440503 MsG0480022053.01.T01:intron 35.0%
!! TTTAAAATGTCGGTGTTGCA+CGG + Chr4:67439595-67439614 None:intergenic 35.0%
!!! AGTCTCTGACATGTTTTAGT+AGG - Chr4:67439629-67439648 MsG0480022053.01.T01:intron 35.0%
!!! ATCCTTTTTAGGTGGTTTCA+AGG - Chr4:67440066-67440085 MsG0480022053.01.T01:intron 35.0%
!!! TCCTTTTTAGGTGGTTTCAA+GGG - Chr4:67440067-67440086 MsG0480022053.01.T01:intron 35.0%
AAAGAGGACATCTTGATAGG+TGG + Chr4:67439460-67439479 None:intergenic 40.0%
AAGCATGCTATCACTAAGAC+TGG - Chr4:67439955-67439974 MsG0480022053.01.T01:intron 40.0%
ACAACAGCACAAAAAGTCCA+AGG - Chr4:67439134-67439153 MsG0480022053.01.T01:three_prime_UTR 40.0%
ATAAACACAGCCCTCAAAGT+GGG + Chr4:67440232-67440251 None:intergenic 40.0%
ATTCCTCCAAATCACTCTGA+TGG - Chr4:67440642-67440661 MsG0480022053.01.T01:CDS 40.0%
CAGAAAGAGGACATCTTGAT+AGG + Chr4:67439463-67439482 None:intergenic 40.0%
CATCAACAAAAAGGTAGGCA+TGG + Chr4:67440537-67440556 None:intergenic 40.0%
CATCATCCATCAGAGTGATT+TGG + Chr4:67440651-67440670 None:intergenic 40.0%
CCACTCATCAACAAAAAGGT+AGG + Chr4:67440542-67440561 None:intergenic 40.0%
GGTGATTATGGTTTCAGCTT+CGG - Chr4:67439299-67439318 MsG0480022053.01.T01:three_prime_UTR 40.0%
TATAAACACAGCCCTCAAAG+TGG + Chr4:67440233-67440252 None:intergenic 40.0%
TCAAGATGTCCTCTTTCTGA+AGG - Chr4:67439464-67439483 MsG0480022053.01.T01:CDS 40.0%
TCCCTTGAAACCACCTAAAA+AGG + Chr4:67440071-67440090 None:intergenic 40.0%
TCCTCCACTCATCAACAAAA+AGG + Chr4:67440546-67440565 None:intergenic 40.0%
TTGCATGTGCTGCAAATTAG+AGG + Chr4:67439849-67439868 None:intergenic 40.0%
! GTGATTTGGAGGAATGAGTT+TGG + Chr4:67440637-67440656 None:intergenic 40.0%
! TACAGTTCGGTTTTCTGTGA+AGG - Chr4:67439749-67439768 MsG0480022053.01.T01:intron 40.0%
! TATTGGTAGCTTCAGTGATG+TGG + Chr4:67439194-67439213 None:intergenic 40.0%
! TGCTATCACTAAGACTGGTT+TGG - Chr4:67439960-67439979 MsG0480022053.01.T01:intron 40.0%
!! ACCTTTTTGTTGATGAGTGG+AGG - Chr4:67440542-67440561 MsG0480022053.01.T01:intron 40.0%
!! CATGGCATTGATTTCCAACT+TGG + Chr4:67440519-67440538 None:intergenic 40.0%
!! CCTACCTTTTTGTTGATGAG+TGG - Chr4:67440539-67440558 MsG0480022053.01.T01:intron 40.0%
!! CTGTGAAGGTAGTTCTGATT+CGG - Chr4:67439763-67439782 MsG0480022053.01.T01:intron 40.0%
AATCCAGTGGAGAAAGCTGT+TGG - Chr4:67440566-67440585 MsG0480022053.01.T01:intron 45.0%
AGTTCCTGTGACCTCAAAGT+GGG + Chr4:67439915-67439934 None:intergenic 45.0%
GATTCCAAACCCCACTTTGA+GGG - Chr4:67439902-67439921 MsG0480022053.01.T01:intron 45.0%
GGCTCCATTTCCAACATAGA+AGG + Chr4:67439828-67439847 None:intergenic 45.0%
GTTGAGTGGAGAGACTCTTA+TGG - Chr4:67440178-67440197 MsG0480022053.01.T01:intron 45.0%
TAAACACAGCCCTCAAAGTG+GGG + Chr4:67440231-67440250 None:intergenic 45.0%
TGATTCCAAACCCCACTTTG+AGG - Chr4:67439901-67439920 MsG0480022053.01.T01:intron 45.0%
TTTATGGTCTATGGAGGGGA+AGG - Chr4:67439514-67439533 MsG0480022053.01.T01:CDS 45.0%
! AGATGTCCTCTTTCTGAAGG+TGG - Chr4:67439467-67439486 MsG0480022053.01.T01:CDS 45.0%
! CATCCATCAGAGTGATTTGG+AGG + Chr4:67440648-67440667 None:intergenic 45.0%
!! AGGTAGTTCTGATTCGGTTC+AGG - Chr4:67439769-67439788 MsG0480022053.01.T01:intron 45.0%
!! GGCATTGATTTCCAACTTGG+AGG + Chr4:67440516-67440535 None:intergenic 45.0%
!! ATAAAAGATATTATTTAATT+AGG + Chr4:67440042-67440061 None:intergenic 5.0%
CAGTTCCTGTGACCTCAAAG+TGG + Chr4:67439916-67439935 None:intergenic 50.0%
CCACATCCACCTTCAGAAAG+AGG + Chr4:67439476-67439495 None:intergenic 50.0%
CTAGGAAGTAGCCTCCAAGT+TGG - Chr4:67440502-67440521 MsG0480022053.01.T01:intron 50.0%
GATGAGTGGAGGAAATCCAG+TGG - Chr4:67440553-67440572 MsG0480022053.01.T01:intron 50.0%
GGATTCCAAACCCCACTTTG+AGG - Chr4:67440218-67440237 MsG0480022053.01.T01:intron 50.0%
GGTGGATGTGGACGAAGTTA+AGG - Chr4:67439485-67439504 MsG0480022053.01.T01:CDS 50.0%
GTTCCTGTGACCTCAAAGTG+GGG + Chr4:67439914-67439933 None:intergenic 50.0%
TGTGACCTCAAAGTGGGGTT+TGG + Chr4:67439909-67439928 None:intergenic 50.0%
! CCTCTTTCTGAAGGTGGATG+TGG - Chr4:67439473-67439492 MsG0480022053.01.T01:CDS 50.0%
!! AAACCCCACTTTGAGGTCAC+AGG - Chr4:67439908-67439927 MsG0480022053.01.T01:intron 50.0%
!! TGTCGGTGTTGCACGGATAA+TGG + Chr4:67439588-67439607 None:intergenic 50.0%
ACAGCCCTCAAAGTGGGGTT+TGG + Chr4:67440226-67440245 None:intergenic 55.0%
GCACCAACAGCTTTCTCCAC+TGG + Chr4:67440572-67440591 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr4 gene 67439123 67440993 67439123 ID=MsG0480022053.01;Name=MsG0480022053.01
Chr4 mRNA 67439123 67440993 67439123 ID=MsG0480022053.01.T01;Parent=MsG0480022053.01;Name=MsG0480022053.01.T01;_AED=0.50;_eAED=0.53;_QI=0|0.5|0.33|1|0|0|3|332|155
Chr4 exon 67439123 67439610 67439123 ID=MsG0480022053.01.T01:exon:8308;Parent=MsG0480022053.01.T01
Chr4 exon 67440610 67440763 67440610 ID=MsG0480022053.01.T01:exon:8307;Parent=MsG0480022053.01.T01
Chr4 exon 67440836 67440993 67440836 ID=MsG0480022053.01.T01:exon:8306;Parent=MsG0480022053.01.T01
Chr4 CDS 67440836 67440993 67440836 ID=MsG0480022053.01.T01:cds;Parent=MsG0480022053.01.T01
Chr4 CDS 67440610 67440763 67440610 ID=MsG0480022053.01.T01:cds;Parent=MsG0480022053.01.T01
Chr4 CDS 67439455 67439610 67439455 ID=MsG0480022053.01.T01:cds;Parent=MsG0480022053.01.T01
Chr4 three_prime_UTR 67439123 67439454 67439123 ID=MsG0480022053.01.T01:three_prime_utr;Parent=MsG0480022053.01.T01
Gene Sequence

>MsG0480022053.01.T01

ATGGGTGGTCAACAACAGCACAAAAAGTCCAAGGTTGTGAAAATTGACTCAAGAAAATCATGGGAACACCACATCACTGAAGCTACCAATAAAGGTTGCCTTGTAAGTATCATCAATTTTATGGTGATTTATTTAATTATTAATCACTTTGTTTGCATGTCTTTTATTTTGTTCATAAAATATTTGCAGGTTATGGTTCATTTTTCTGCTTATTGGTGCGTTCCTTCTATTGCTATGAACCCTTTCTTTGAAGAATTGGCATCCACCTATCAAGATGTCCTCTTTCTGAAGGTGGATGTGGACGAAGTTAAGGAAGTAGCCTCCAAGTTGGAAATCAATGCCATGCCTACCTTTTTGTTGATGAGTGGAGGAAATCCAGTGGAGAAAGCTGTTGGTGCAAATCCTGATGAAATTAGGAAAAGGATGGATCATTTTATTAACCAAACTCATTCCTCCAAATCACTCTGA
Protein sequence

>MsG0480022053.01.T01

MGGQQQHKKSKVVKIDSRKSWEHHITEATNKGCLVSIINFMVIYLIINHFVCMSFILFIKYLQVMVHFSAYWCVPSIAMNPFFEELASTYQDVLFLKVDVDEVKEVASKLEINAMPTFLLMSGGNPVEKAVGANPDEIRKRMDHFINQTHSSKSL*