AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028916.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028916.01.T01 MTR_5g078030 98.195 277 5 0 1 277 1 277 0.0 555
MsG0580028916.01.T01 MTR_3g065370 64.643 280 91 3 1 277 1 275 1.90e-120 349
MsG0580028916.01.T01 MTR_8g104990 50.575 261 122 2 23 276 20 280 4.90e-90 272
MsG0580028916.01.T01 MTR_5g078040 95.789 95 4 0 277 371 48 142 6.15e-60 190
MsG0580028916.01.T01 MTR_1g044580 31.399 293 182 9 5 282 5 293 1.28e-26 112
MsG0580028916.01.T01 MTR_1g080350 31.250 288 170 13 8 275 10 289 7.68e-26 105
MsG0580028916.01.T01 MTR_7g098410 27.526 287 184 8 5 280 12 285 2.56e-25 104
MsG0580028916.01.T01 MTR_1g073320 29.000 300 187 8 13 293 18 310 3.68e-25 104
MsG0580028916.01.T01 MTR_2g088980 28.696 230 153 2 8 226 9 238 3.84e-22 94.4
MsG0580028916.01.T01 MTR_1g105640 27.823 248 161 6 7 237 11 257 3.88e-22 98.6
MsG0580028916.01.T01 MTR_1g105640 27.823 248 161 6 7 237 11 257 5.84e-22 97.8
MsG0580028916.01.T01 MTR_1g105640 27.823 248 161 6 7 237 11 257 6.18e-22 97.8
MsG0580028916.01.T01 MTR_2g088930 28.085 235 157 5 3 226 5 238 3.87e-21 91.7
MsG0580028916.01.T01 MTR_5g005480 28.929 280 167 8 13 269 15 285 8.53e-20 91.3
MsG0580028916.01.T01 MTR_5g081530 56.579 76 30 2 277 352 62 134 1.24e-19 85.1
MsG0580028916.01.T01 MTR_1g105650 28.704 216 135 4 28 226 34 247 3.75e-19 89.4
MsG0580028916.01.T01 MTR_6g061940 46.237 93 44 4 277 368 71 158 5.69e-18 80.5
MsG0580028916.01.T01 MTR_3g011910 25.630 238 158 4 6 228 21 254 1.52e-17 84.3
MsG0580028916.01.T01 MTR_4g091590 47.312 93 43 4 277 368 71 158 1.56e-17 79.3
MsG0580028916.01.T01 MTR_6g463830 26.860 242 158 6 4 226 3 244 1.64e-17 84.7
MsG0580028916.01.T01 MTR_8g041710 23.208 293 204 5 3 277 5 294 1.97e-17 84.3
MsG0580028916.01.T01 MTR_6g055960 27.700 213 132 4 33 226 28 237 4.08e-17 83.6
MsG0580028916.01.T01 MTR_1g105655 25.000 280 187 8 23 282 31 307 5.02e-17 83.2
MsG0580028916.01.T01 MTR_6g061850 47.312 93 43 4 277 368 71 158 9.40e-17 77.4
MsG0580028916.01.T01 MTR_4g093080 45.833 96 46 4 277 371 689 779 1.89e-16 81.3
MsG0580028916.01.T01 MTR_4g088490 45.652 92 46 3 277 368 73 160 2.63e-16 76.3
MsG0580028916.01.T01 MTR_6g053000 26.047 215 141 6 2 204 6 214 2.87e-16 80.9
MsG0580028916.01.T01 MTR_6g463400 26.141 241 159 4 5 226 3 243 4.21e-16 80.1
MsG0580028916.01.T01 MTR_1g104890 23.548 310 205 9 1 279 7 315 4.55e-16 78.6
MsG0580028916.01.T01 MTR_6g022000 45.882 85 42 2 277 359 47 129 4.98e-16 74.7
MsG0580028916.01.T01 MTR_3g011910 25.463 216 142 4 28 228 17 228 5.92e-16 79.7
MsG0580028916.01.T01 MTR_8g041690 24.312 218 152 3 22 226 22 239 6.29e-16 79.7
MsG0580028916.01.T01 MTR_8g028065 27.119 236 162 3 1 226 1 236 6.54e-16 79.7
MsG0580028916.01.T01 MTR_1g104890 23.548 310 205 9 1 279 7 315 6.90e-16 79.7
MsG0580028916.01.T01 MTR_1g104890 23.490 298 202 8 7 279 19 315 9.78e-16 78.6
MsG0580028916.01.T01 MTR_1g104890 23.856 306 197 9 9 279 11 315 1.13e-15 79.0
MsG0580028916.01.T01 MTR_3g011890 25.389 193 133 2 44 226 47 238 1.38e-15 76.3
MsG0580028916.01.T01 MTR_1g076880 45.745 94 48 2 277 370 94 184 2.08e-15 74.3
MsG0580028916.01.T01 MTR_7g052020 27.411 197 120 5 46 226 42 231 2.59e-15 75.5
MsG0580028916.01.T01 MTR_4g088475 50.633 79 34 3 277 354 70 144 2.74e-15 74.7
MsG0580028916.01.T01 MTR_4g088475 47.312 93 40 5 280 368 143 230 2.38e-13 69.3
MsG0580028916.01.T01 MTR_8g041880 27.232 224 147 5 2 211 5 226 3.99e-15 77.4
MsG0580028916.01.T01 MTR_1g105615 25.726 241 155 6 7 226 9 246 4.17e-15 77.0
MsG0580028916.01.T01 MTR_1g076910 53.425 73 31 2 277 349 97 166 8.23e-15 72.8
MsG0580028916.01.T01 MTR_0007s0020 26.337 243 155 6 6 226 5 245 9.37e-15 76.3
MsG0580028916.01.T01 MTR_1g021635 27.049 244 150 9 7 228 10 247 1.81e-14 75.1
MsG0580028916.01.T01 MTR_5g068260 26.471 204 131 4 38 226 39 238 4.85e-14 73.9
MsG0580028916.01.T01 MTR_4g088445 48.718 78 37 2 277 354 52 126 5.32e-14 68.9
MsG0580028916.01.T01 MTR_5g005450 28.095 210 119 4 38 226 41 239 5.38e-14 73.9
MsG0580028916.01.T01 MTR_1g076860 50.649 77 35 2 277 353 87 160 8.58e-14 69.7
MsG0580028916.01.T01 MTR_7g033135 28.511 235 144 9 6 228 10 232 1.53e-13 72.4
MsG0580028916.01.T01 MTR_5g068250 26.471 204 131 4 38 226 44 243 2.20e-13 71.6
MsG0580028916.01.T01 MTR_8g041650 24.519 208 139 5 4 198 12 214 4.13e-13 71.2
MsG0580028916.01.T01 MTR_0074s0060 26.316 228 145 4 6 231 5 211 1.02e-12 69.7
MsG0580028916.01.T01 MTR_6g463700 25.514 243 164 3 1 226 4 246 1.22e-12 69.7
MsG0580028916.01.T01 MTR_6g057750 25.514 243 164 3 1 226 4 246 1.48e-12 69.7
MsG0580028916.01.T01 MTR_3g064080 25.339 221 153 3 18 227 19 238 1.75e-12 68.9
MsG0580028916.01.T01 MTR_3g079850 24.507 355 211 16 10 332 10 339 2.33e-12 68.6
MsG0580028916.01.T01 MTR_3g079850 24.507 355 211 16 10 332 10 339 2.48e-12 68.6
MsG0580028916.01.T01 MTR_8g041890 25.110 227 148 8 2 211 5 226 5.15e-12 67.8
MsG0580028916.01.T01 MTR_6g463660 25.847 236 154 4 7 226 14 244 1.12e-11 66.2
MsG0580028916.01.T01 MTR_6g463660 26.263 198 125 5 20 204 272 461 1.73e-11 65.9
MsG0580028916.01.T01 MTR_6g057680 25.847 236 154 4 7 226 14 244 1.12e-11 66.2
MsG0580028916.01.T01 MTR_6g057680 26.263 198 125 5 20 204 272 461 1.73e-11 65.9
MsG0580028916.01.T01 MTR_6g057440 29.771 131 88 3 6 132 5 135 2.94e-11 61.6
MsG0580028916.01.T01 MTR_1g075470 50.649 77 35 2 277 353 60 133 3.42e-11 61.6
MsG0580028916.01.T01 MTR_1g076890 41.935 93 49 3 277 369 87 174 3.72e-11 62.4
MsG0580028916.01.T01 MTR_5g005530 22.977 309 190 9 1 276 10 303 4.29e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028916.01.T01 AT5G37660 58.423 279 114 2 1 277 9 287 1.31e-107 317
MsG0580028916.01.T01 AT5G37660 58.423 279 114 2 1 277 9 287 1.66e-107 317
MsG0580028916.01.T01 AT2G01660 52.330 279 124 4 6 275 5 283 1.76e-97 291
MsG0580028916.01.T01 AT2G01660 52.330 279 124 4 6 275 5 283 1.80e-97 291
MsG0580028916.01.T01 AT2G01660 55.000 240 104 3 6 241 5 244 1.37e-89 270
MsG0580028916.01.T01 AT1G70690 43.617 282 146 4 7 275 10 291 2.25e-72 228
MsG0580028916.01.T01 AT3G60720 38.521 257 152 3 25 276 26 281 6.68e-56 185
MsG0580028916.01.T01 AT3G60720 39.216 255 145 4 25 274 26 275 8.48e-56 184
MsG0580028916.01.T01 AT3G60720 38.813 219 129 2 25 238 26 244 5.41e-49 166
MsG0580028916.01.T01 AT5G37670 68.367 98 27 2 277 371 41 137 1.56e-38 135
MsG0580028916.01.T01 AT2G33330 27.304 293 194 5 1 276 10 300 1.49e-23 99.8
MsG0580028916.01.T01 AT1G04520 27.778 306 183 8 2 276 5 303 6.28e-23 98.2
MsG0580028916.01.T01 AT1G07400 47.312 93 45 3 277 368 67 156 1.54e-19 85.1
MsG0580028916.01.T01 AT1G53540 47.826 92 44 3 277 368 69 156 3.37e-19 84.0
MsG0580028916.01.T01 AT1G59860 47.312 93 45 3 277 368 65 154 1.63e-18 82.0
MsG0580028916.01.T01 AT5G43980 28.897 263 164 6 26 266 27 288 2.10e-18 85.1
MsG0580028916.01.T01 AT5G48540 27.536 207 135 3 34 226 30 235 3.54e-18 84.0
MsG0580028916.01.T01 AT1G63550 26.570 207 135 4 38 229 42 246 4.53e-17 81.6
MsG0580028916.01.T01 AT3G58310 28.326 233 151 6 18 236 28 258 5.68e-16 77.4
MsG0580028916.01.T01 AT3G22060 30.000 220 133 7 23 226 29 243 1.74e-15 75.9
MsG0580028916.01.T01 AT4G05200 26.122 245 152 6 4 226 23 260 1.74e-15 78.6
MsG0580028916.01.T01 AT4G05200 26.122 245 152 6 4 226 5 242 2.25e-15 78.2
MsG0580028916.01.T01 AT1G63580 25.210 238 153 7 44 258 37 272 6.39e-15 74.7
MsG0580028916.01.T01 AT5G59720 47.500 80 38 3 289 368 83 158 1.37e-14 71.2
MsG0580028916.01.T01 AT4G10250 41.489 94 52 2 277 370 90 180 2.28e-14 71.6
MsG0580028916.01.T01 AT5G40380 27.972 286 163 12 3 267 8 271 3.30e-14 74.3
MsG0580028916.01.T01 AT4G23280 26.800 250 152 9 18 242 18 261 3.57e-14 74.3
MsG0580028916.01.T01 AT4G23280 26.800 250 152 9 18 242 18 261 3.77e-14 74.3
MsG0580028916.01.T01 AT5G40380 27.972 286 163 12 3 267 8 271 4.13e-14 73.9
MsG0580028916.01.T01 AT5G40380 26.408 284 170 10 3 267 8 271 4.26e-14 74.3
MsG0580028916.01.T01 AT4G23280 26.800 250 152 9 18 242 18 261 5.81e-14 73.6
MsG0580028916.01.T01 AT5G41290 23.695 249 156 7 3 228 6 243 6.99e-14 72.0
MsG0580028916.01.T01 AT1G63570 26.852 216 141 6 28 228 81 294 1.32e-13 71.6
MsG0580028916.01.T01 AT5G41300 23.109 238 162 5 8 226 10 245 1.56e-13 70.9
MsG0580028916.01.T01 AT1G63570 26.027 219 139 5 28 228 28 241 1.62e-13 70.9
MsG0580028916.01.T01 AT1G63570 26.027 219 139 5 28 228 28 241 1.62e-13 70.9
MsG0580028916.01.T01 AT4G23310 28.509 228 144 6 28 239 28 252 1.74e-13 72.4
MsG0580028916.01.T01 AT4G23310 28.509 228 144 6 28 239 28 252 2.27e-13 72.0
MsG0580028916.01.T01 AT1G63600 22.807 228 156 4 17 226 26 251 5.50e-13 69.7
MsG0580028916.01.T01 AT2G29500 48.718 78 34 4 292 368 80 152 6.75e-13 66.2
MsG0580028916.01.T01 AT4G23270 27.239 268 160 10 1 242 1 259 7.36e-13 70.5
MsG0580028916.01.T01 AT4G23270 27.239 268 160 10 1 242 1 259 8.40e-13 70.1
MsG0580028916.01.T01 AT4G23270 27.239 268 160 10 1 242 1 259 8.40e-13 70.1
MsG0580028916.01.T01 AT3G46230 45.000 80 40 3 289 368 80 155 1.22e-12 65.5
MsG0580028916.01.T01 AT1G61750 21.661 277 178 6 28 267 29 303 1.55e-12 68.6
MsG0580028916.01.T01 AT4G23180 29.703 202 113 8 28 208 39 232 5.59e-12 67.4
MsG0580028916.01.T01 AT4G23180 29.703 202 113 8 28 208 39 232 5.79e-12 67.4
MsG0580028916.01.T01 AT4G23180 29.703 202 113 8 28 208 39 232 7.42e-12 67.4
MsG0580028916.01.T01 AT3G21970 26.778 239 142 9 7 221 13 242 1.27e-11 64.7
MsG0580028916.01.T01 AT4G23160 25.714 210 119 7 22 205 619 817 1.68e-11 66.2
MsG0580028916.01.T01 AT4G23160 25.714 210 119 7 22 205 619 817 1.68e-11 66.2
MsG0580028916.01.T01 AT4G21230 22.848 302 180 9 38 301 41 327 2.08e-11 65.9
MsG0580028916.01.T01 AT4G23160 25.714 210 119 7 22 205 39 237 2.73e-11 65.5
MsG0580028916.01.T01 AT1G70530 26.050 238 150 7 69 287 67 297 7.42e-11 63.9
MsG0580028916.01.T01 AT1G70530 26.050 238 150 7 69 287 67 297 8.56e-11 63.9
MsG0580028916.01.T01 AT1G70530 26.050 238 150 7 69 287 67 297 8.64e-11 63.9

Find 115 sgRNAs with CRISPR-Local

Find 425 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCGAACTTTATGCGATTT+AGG 0.178846 5:-88651307 None:intergenic
TCTCTTGAGCCCATGGCTTC+TGG 0.211124 5:-88644976 None:intergenic
TGTACTGGGGATCTTAGTTT+TGG 0.219626 5:+88645078 MsG0580028916.01.T01:CDS
ATTCTGATAAAGAAAGAAAA+AGG 0.241098 5:-88644567 None:intergenic
AGGTGTGAAAGAGGAGAATT+TGG 0.250094 5:+88651132 MsG0580028916.01.T01:CDS
GGTTAATACTTAATATAATA+AGG 0.251381 5:+88651468 MsG0580028916.01.T01:three_prime_UTR
CCCGAACCACCAACCCTAAA+AGG 0.259227 5:-88645033 None:intergenic
TGGATGGCTTGCAGGAAAAT+TGG 0.277770 5:+88645988 MsG0580028916.01.T01:intron
TTTCATTCTAAGCAAATCAT+AGG 0.285670 5:+88644421 MsG0580028916.01.T01:five_prime_UTR
CTTTCTTGAGCAAGATTTGT+AGG 0.299010 5:+88646086 MsG0580028916.01.T01:CDS
ATTGCCTGAGAATGTGAAAT+TGG 0.307126 5:+88651222 MsG0580028916.01.T01:CDS
CGTGGTGTTGCCCAGTGTAC+TGG 0.317322 5:+88645063 MsG0580028916.01.T01:CDS
GATTTAGGTGATGCATCTTT+AGG 0.322099 5:-88651292 None:intergenic
ATTAAGGCACATGTGGAAAA+TGG 0.324420 5:+88651250 MsG0580028916.01.T01:CDS
GCTGTGCTTGGCGGGCTTGT+GGG 0.336921 5:+88645000 MsG0580028916.01.T01:CDS
CTTGGCGGGCTTGTGGGCTT+AGG 0.343952 5:+88645006 MsG0580028916.01.T01:CDS
TGTGAAATTGGATCAGATTA+AGG 0.350056 5:+88651234 MsG0580028916.01.T01:CDS
GATTGTGGTACTGCAGATTA+TGG 0.358387 5:+88645147 MsG0580028916.01.T01:CDS
GCACGCGCTGTCACACGTGC+TGG 0.363096 5:+88644817 MsG0580028916.01.T01:CDS
AAAATTATAAATGTGTTGAT+AGG 0.367184 5:+88651362 MsG0580028916.01.T01:three_prime_UTR
AAGAGATTTGCATTAATCAT+TGG 0.369856 5:+88646025 MsG0580028916.01.T01:CDS
GAATGAAAACTTTGAACAAT+GGG 0.370147 5:-88644406 None:intergenic
CAAGAGATGCTGTGCTTGGC+GGG 0.375041 5:+88644992 MsG0580028916.01.T01:CDS
GATTATGGAGATTTGTTCTT+GGG 0.375248 5:+88645162 MsG0580028916.01.T01:CDS
ATTTGGGAAAGGACGTTGTT+TGG 0.379978 5:+88651149 MsG0580028916.01.T01:CDS
TGCTGTGCTTGGCGGGCTTG+TGG 0.384762 5:+88644999 MsG0580028916.01.T01:CDS
AGCAATGAGAATAACAAGTA+TGG 0.392517 5:-88646065 None:intergenic
TGATCCAATTTCACATTCTC+AGG 0.393293 5:-88651226 None:intergenic
TTTGACTCGTAGGGTGAGTT+TGG 0.395292 5:-88644643 None:intergenic
ACCACAAACCTCTACCTATA+CGG 0.397734 5:+88644595 MsG0580028916.01.T01:CDS
TTAATCATTGGTTTATTAGC+AGG 0.406034 5:+88646037 MsG0580028916.01.T01:CDS
GGTCGCCACGGCATTGATAT+AGG 0.413623 5:-88644765 None:intergenic
TCAAGAGATGCTGTGCTTGG+CGG 0.415902 5:+88644991 MsG0580028916.01.T01:CDS
GGTCCAGCTCGACGGTTGTT+TGG 0.415998 5:+88644870 MsG0580028916.01.T01:CDS
GGCCATAGATTATGTCTTGT+TGG 0.417754 5:-88644744 None:intergenic
AGATTATGGAGATTTGTTCT+TGG 0.419653 5:+88645161 MsG0580028916.01.T01:CDS
GAGAGGAGAAGGTGTGAAAG+AGG 0.421173 5:+88651123 MsG0580028916.01.T01:CDS
GGCGGGCTTGTGGGCTTAGG+TGG 0.428475 5:+88645009 MsG0580028916.01.T01:CDS
GCCATAGATTATGTCTTGTT+GGG 0.429320 5:-88644743 None:intergenic
AGATTAAAGACCTATGAGTA+TGG 0.432343 5:-88644382 None:intergenic
TGGGGCCCATGATACGTCTA+AGG 0.432532 5:+88645212 MsG0580028916.01.T01:CDS
GAGCAAGATTTGTAGGAGAC+AGG 0.437724 5:+88646093 MsG0580028916.01.T01:CDS
CACGCGCTGTCACACGTGCT+GGG 0.445092 5:+88644818 MsG0580028916.01.T01:CDS
ACCCAACAAGACATAATCTA+TGG 0.445749 5:+88644742 MsG0580028916.01.T01:CDS
CATGTAGCTGAGAGAGGAAC+TGG 0.448798 5:+88651172 MsG0580028916.01.T01:CDS
TAGGGTTGGTGGTTCGGGTA+CGG 0.459468 5:+88645038 MsG0580028916.01.T01:CDS
GCGGGCTTGTGGGCTTAGGT+GGG 0.463008 5:+88645010 MsG0580028916.01.T01:CDS
GTGGTGTTGCCCAGTGTACT+GGG 0.465182 5:+88645064 MsG0580028916.01.T01:CDS
TACAACAACTTCACCGTCCT+AGG 0.469752 5:+88644715 MsG0580028916.01.T01:CDS
GCAGGAAAATTGGGTATAGT+AGG 0.470565 5:+88645998 MsG0580028916.01.T01:intron
CATGGGCCTTAGACGTATCA+TGG 0.471929 5:-88645218 None:intergenic
GTGAGGTGAGGAGTGAATTG+AGG 0.473079 5:-88644666 None:intergenic
GGATGGCTTGCAGGAAAATT+GGG 0.474228 5:+88645989 MsG0580028916.01.T01:intron
GCTGAGAGAGGAACTGGAAA+AGG 0.474637 5:+88651178 MsG0580028916.01.T01:CDS
TATGTTATATTATATGCATA+TGG 0.475621 5:-88644461 None:intergenic
TCGCGACTCGTGCGGAGGCA+CGG 0.481840 5:+88644849 MsG0580028916.01.T01:CDS
TGTCTTGTTGGGTGGACCCT+AGG 0.483605 5:-88644732 None:intergenic
GGCTCAAGAGATGCTGTGCT+TGG 0.485910 5:+88644988 MsG0580028916.01.T01:CDS
AGAATGAAAACTTTGAACAA+TGG 0.493470 5:-88644407 None:intergenic
TGAATTGAGGTTTGACTCGT+AGG 0.499158 5:-88644653 None:intergenic
ATAAAAGTACAAATTGAGGA+AGG 0.500236 5:+88651085 MsG0580028916.01.T01:CDS
CCGTGGCGACCTCGCTATGC+CGG 0.500432 5:+88644777 MsG0580028916.01.T01:CDS
CACAGCATCTCTTGAGCCCA+TGG 0.506789 5:-88644983 None:intergenic
TGTGATGAAGAATCAATGTT+TGG 0.508053 5:+88651447 MsG0580028916.01.T01:three_prime_UTR
GGTGTGAAAGAGGAGAATTT+GGG 0.509159 5:+88651133 MsG0580028916.01.T01:CDS
GTTGTGTGCAACCACCGTAT+AGG 0.510615 5:-88644609 None:intergenic
TGAGATAAAAGTACAAATTG+AGG 0.510672 5:+88651081 MsG0580028916.01.T01:CDS
AACTAAGATCCCCAGTACAC+TGG 0.510980 5:-88645074 None:intergenic
TAGGACGGTGAAGTTGTTGT+AGG 0.515242 5:-88644713 None:intergenic
TCACCAAACAACCGTCGAGC+TGG 0.516521 5:-88644873 None:intergenic
TTCATTCTAAGCAAATCATA+GGG 0.521867 5:+88644422 MsG0580028916.01.T01:five_prime_UTR
ATAGATTATGTCTTGTTGGG+TGG 0.527972 5:-88644740 None:intergenic
GGGCTATAATCCAGAAGCCA+TGG 0.539733 5:+88644966 MsG0580028916.01.T01:CDS
AACTTCAGTTCCATACTCAT+AGG 0.552041 5:+88644372 None:intergenic
ACCGTATAGGTAGAGGTTTG+TGG 0.553030 5:-88644596 None:intergenic
ACTAAGATCCCCAGTACACT+GGG 0.557663 5:-88645073 None:intergenic
GCGACACAGGAGGCACAGTC+CGG 0.560545 5:-88644796 None:intergenic
TGTGACAGCGCGTGCGACAC+AGG 0.562753 5:-88644809 None:intergenic
GGCTATAATCCAGAAGCCAT+GGG 0.566857 5:+88644967 MsG0580028916.01.T01:CDS
AGACGTATCATGGGCCCCAC+CGG 0.577254 5:-88645208 None:intergenic
TGCAACCACCGTATAGGTAG+AGG 0.578158 5:-88644603 None:intergenic
ATGCAAGATATTCTACCGGT+GGG 0.580075 5:+88645193 MsG0580028916.01.T01:CDS
GGTGGTTCGGGTACGGTACG+TGG 0.580668 5:+88645045 MsG0580028916.01.T01:CDS
GTGTTGTAGAAGCGATCGGA+CGG 0.581568 5:+88645115 MsG0580028916.01.T01:CDS
GAATTGAGGTTTGACTCGTA+GGG 0.593749 5:-88644652 None:intergenic
GTTTGGCATGTAGCTGAGAG+AGG 0.595466 5:+88651166 MsG0580028916.01.T01:CDS
ACAACAACTTCACCGTCCTA+GGG 0.596633 5:+88644716 MsG0580028916.01.T01:CDS
GGAGGCACGGTCCAGCTCGA+CGG 0.596985 5:+88644862 MsG0580028916.01.T01:CDS
AGCAAGATTTGTAGGAGACA+GGG 0.602074 5:+88646094 MsG0580028916.01.T01:CDS
ACGCGCTGTCACACGTGCTG+GGG 0.608382 5:+88644819 MsG0580028916.01.T01:CDS
CCGGCATAGCGAGGTCGCCA+CGG 0.614398 5:-88644777 None:intergenic
ATGTGTCGCGACTCGTGCGG+AGG 0.615055 5:+88644844 MsG0580028916.01.T01:CDS
GGCTTCTGGATTATAGCCCA+CGG 0.615132 5:-88644962 None:intergenic
GGACGGTTGAAAAGTGATTG+TGG 0.615271 5:+88645132 MsG0580028916.01.T01:CDS
TGTTATGCAAGATATTCTAC+CGG 0.616220 5:+88645189 MsG0580028916.01.T01:CDS
GGATCAGATTAAGGCACATG+TGG 0.617096 5:+88651243 MsG0580028916.01.T01:CDS
AGGCACAGTCCGGCATAGCG+AGG 0.619370 5:-88644786 None:intergenic
GATTGTGTTGTAGAAGCGAT+CGG 0.619387 5:+88645111 MsG0580028916.01.T01:CDS
TAAAAGTACAAATTGAGGAA+GGG 0.619489 5:+88651086 MsG0580028916.01.T01:CDS
TATGCAAGATATTCTACCGG+TGG 0.627330 5:+88645192 MsG0580028916.01.T01:CDS
CATGATACGTCTAAGGCCCA+TGG 0.629745 5:+88645219 MsG0580028916.01.T01:CDS
ATGGGCCTTAGACGTATCAT+GGG 0.630265 5:-88645217 None:intergenic
GAAAGAGGAGAATTTGGGAA+AGG 0.633626 5:+88651138 MsG0580028916.01.T01:CDS
TCTGGATTATAGCCCACGGA+AGG 0.644583 5:-88644958 None:intergenic
TAATGATGTAAACAATTGCA+TGG 0.648965 5:+88651424 MsG0580028916.01.T01:three_prime_UTR
TGCAAGATATTCTACCGGTG+GGG 0.653008 5:+88645194 MsG0580028916.01.T01:CDS
AATGAAAACTTTGAACAATG+GGG 0.657828 5:-88644405 None:intergenic
TTGTTGGGTGGACCCTAGGA+CGG 0.669929 5:-88644728 None:intergenic
CTGAGTTGACTAGTGAGGTG+AGG 0.674733 5:-88644678 None:intergenic
GACATGTGTCGCGACTCGTG+CGG 0.678683 5:+88644841 MsG0580028916.01.T01:CDS
TATGGCCTATATCAATGCCG+TGG 0.684424 5:+88644760 MsG0580028916.01.T01:CDS
GACAGCGCGTGCGACACAGG+AGG 0.694407 5:-88644806 None:intergenic
ACAAACCTCTACCTATACGG+TGG 0.712151 5:+88644598 MsG0580028916.01.T01:CDS
TGGTGTTGCCCAGTGTACTG+GGG 0.727512 5:+88645065 MsG0580028916.01.T01:CDS
TGTTGCTGAGTTGACTAGTG+AGG 0.747592 5:-88644683 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAATAAAAATAAAAAAT+AGG - Chr5:88649342-88649361 None:intergenic 0.0%
!! AATATGTATAAAAACATAAT+AGG + Chr5:88647051-88647070 MsG0580028916.01.T01:intron 10.0%
!! TTAAAGAAAAAATAATACTT+TGG - Chr5:88648817-88648836 None:intergenic 10.0%
!! TTGAGAATATAAAAAAAAAT+GGG - Chr5:88649823-88649842 None:intergenic 10.0%
!!! AATTTTAAAATCTGAAAAAT+AGG + Chr5:88649244-88649263 MsG0580028916.01.T01:intron 10.0%
!!! ATAAATGAAATATCAAATTT+TGG + Chr5:88648219-88648238 MsG0580028916.01.T01:intron 10.0%
!!! ATTTGATTTTTAGAATTTTT+TGG + Chr5:88649871-88649890 MsG0580028916.01.T01:intron 10.0%
!!! ATTTTAAAATCTGAAAAATA+GGG + Chr5:88649245-88649264 MsG0580028916.01.T01:intron 10.0%
!!! ATTTTAAATTATCATCAATA+TGG + Chr5:88650947-88650966 MsG0580028916.01.T01:intron 10.0%
!!! TTTAATTAAACAAAAACTTT+TGG + Chr5:88647173-88647192 MsG0580028916.01.T01:intron 10.0%
!! AAATTAAAACATATAACCAT+TGG + Chr5:88646196-88646215 MsG0580028916.01.T01:intron 15.0%
!! AATGTTTACAAATTACAAAT+TGG - Chr5:88645525-88645544 None:intergenic 15.0%
!! ATAAGTTGTAAATAAAGATA+GGG + Chr5:88646919-88646938 MsG0580028916.01.T01:intron 15.0%
!! ATGTTGAAATAATAAAACAT+TGG - Chr5:88645601-88645620 None:intergenic 15.0%
!! ATTTACTTGTGAAAATATTA+GGG + Chr5:88645678-88645697 MsG0580028916.01.T01:intron 15.0%
!! GGTTAATACTTAATATAATA+AGG + Chr5:88651468-88651487 MsG0580028916.01.T01:three_prime_UTR 15.0%
!! GTTGAGAATATAAAAAAAAA+TGG - Chr5:88649824-88649843 None:intergenic 15.0%
!! TATAAGTTGTAAATAAAGAT+AGG + Chr5:88646918-88646937 MsG0580028916.01.T01:intron 15.0%
!! TATATCTTATTAACTCTAAT+AGG + Chr5:88647483-88647502 MsG0580028916.01.T01:intron 15.0%
!! TATGTTATATTATATGCATA+TGG - Chr5:88644464-88644483 None:intergenic 15.0%
!! TATTTACTTGTGAAAATATT+AGG + Chr5:88645677-88645696 MsG0580028916.01.T01:intron 15.0%
!! TGTTGAAATAATAAAACATT+GGG - Chr5:88645600-88645619 None:intergenic 15.0%
!! TTTAAATTTGAAAGAGAAAA+AGG - Chr5:88646406-88646425 None:intergenic 15.0%
!! TTTAATTAATCAAATCTTCT+AGG - Chr5:88650244-88650263 None:intergenic 15.0%
!!! AAAATTATAAATGTGTTGAT+AGG + Chr5:88651362-88651381 MsG0580028916.01.T01:three_prime_UTR 15.0%
!!! AATATTTCTTTTGGTAAATT+AGG - Chr5:88647372-88647391 None:intergenic 15.0%
!!! AATGTAGTCTTTTTTTTTTT+TGG + Chr5:88647961-88647980 MsG0580028916.01.T01:intron 15.0%
!!! ATATTACCATTTTTAATAGT+CGG - Chr5:88648424-88648443 None:intergenic 15.0%
!!! ATATTTCTTTTGGTAAATTA+GGG - Chr5:88647371-88647390 None:intergenic 15.0%
!!! TAAAAAGTTTGATATTGATT+TGG + Chr5:88647578-88647597 MsG0580028916.01.T01:intron 15.0%
!!! TATGATTTTACTTTGTTTTT+TGG + Chr5:88649924-88649943 MsG0580028916.01.T01:intron 15.0%
!!! TATTTTACCAAAATGTTTAT+GGG - Chr5:88650077-88650096 None:intergenic 15.0%
!!! TTATTTTACCAAAATGTTTA+TGG - Chr5:88650078-88650097 None:intergenic 15.0%
!!! TTTCTTTTGAATATTTCTTT+TGG - Chr5:88647381-88647400 None:intergenic 15.0%
!!! TTTTAAAAGTGTTTTTTATG+AGG + Chr5:88647542-88647561 MsG0580028916.01.T01:intron 15.0%
!!! TTTTATACATATTGATTGAT+TGG - Chr5:88647044-88647063 None:intergenic 15.0%
!!! TTTTATCAAGTTTAAATAGA+AGG - Chr5:88648272-88648291 None:intergenic 15.0%
!!! TTTTCTTTTACTTTATGTTA+GGG + Chr5:88645460-88645479 MsG0580028916.01.T01:intron 15.0%
!! AAATAGAAGGTAAAATTAGA+AGG - Chr5:88648259-88648278 None:intergenic 20.0%
!! AAATTATCCTAATCAACTAT+TGG - Chr5:88648851-88648870 None:intergenic 20.0%
!! AAGAGAATTGTAAGAAAAAA+AGG + Chr5:88645627-88645646 MsG0580028916.01.T01:intron 20.0%
!! AATAACATAACTTTGTAAAG+TGG - Chr5:88646563-88646582 None:intergenic 20.0%
!! AATAGTTGATTAGGATAATT+TGG + Chr5:88648850-88648869 MsG0580028916.01.T01:intron 20.0%
!! ATTCTGATAAAGAAAGAAAA+AGG - Chr5:88644570-88644589 None:intergenic 20.0%
!! CAAAGTAAAATCATAAAACA+TGG - Chr5:88649919-88649938 None:intergenic 20.0%
!! GTAAAATTAGAAGGAAAAAA+TGG - Chr5:88648250-88648269 None:intergenic 20.0%
!! TAAAAATGGAGAGAAAAATA+TGG + Chr5:88651387-88651406 MsG0580028916.01.T01:three_prime_UTR 20.0%
!! TAATCAAAGCTTACATATTA+AGG + Chr5:88646747-88646766 MsG0580028916.01.T01:intron 20.0%
!! TGTAGTCTAACTTTATAAAT+AGG + Chr5:88648063-88648082 MsG0580028916.01.T01:intron 20.0%
!! TGTTTCATTGTTAAAAAAGT+CGG + Chr5:88647684-88647703 MsG0580028916.01.T01:intron 20.0%
!! TTCTGATAAAGAAAGAAAAA+GGG - Chr5:88644569-88644588 None:intergenic 20.0%
!! TTTGAATACAAAAAGAAAAG+AGG + Chr5:88646497-88646516 MsG0580028916.01.T01:intron 20.0%
!! TTTGATTAATTAAAGAACAC+AGG + Chr5:88650250-88650269 MsG0580028916.01.T01:intron 20.0%
!! TTTGCATTATTTACAATACT+TGG + Chr5:88646655-88646674 MsG0580028916.01.T01:intron 20.0%
!!! AAAGAAACAATTACTTTTGT+TGG + Chr5:88647394-88647413 MsG0580028916.01.T01:intron 20.0%
!!! AATTGAGTTTGATTAAGTTT+TGG + Chr5:88651023-88651042 MsG0580028916.01.T01:intron 20.0%
!!! ACATTTTGGTAAAATAAATG+AGG + Chr5:88650081-88650100 MsG0580028916.01.T01:intron 20.0%
!!! ATTGAGTTTGATTAAGTTTT+GGG + Chr5:88651024-88651043 MsG0580028916.01.T01:intron 20.0%
!!! CTACTTCTTTTTTAATCAAA+AGG + Chr5:88645285-88645304 MsG0580028916.01.T01:intron 20.0%
!!! GAAGTTTTATGATTTTCTTT+AGG - Chr5:88650145-88650164 None:intergenic 20.0%
!!! GTTTTCTTTTACTTTATGTT+AGG + Chr5:88645459-88645478 MsG0580028916.01.T01:intron 20.0%
!!! TCTCGATCATTTTTTTTATT+AGG - Chr5:88648313-88648332 None:intergenic 20.0%
!!! TGAATTTTTAAATAAGAGCA+TGG + Chr5:88647084-88647103 MsG0580028916.01.T01:intron 20.0%
!!! TGATTTTTAGAATTTTTTGG+TGG + Chr5:88649874-88649893 MsG0580028916.01.T01:intron 20.0%
!!! TGTTTTGTTGAAAATATATG+TGG + Chr5:88650619-88650638 MsG0580028916.01.T01:intron 20.0%
!!! TTATCTGTTTTTATCCATTT+AGG - Chr5:88649206-88649225 None:intergenic 20.0%
!!! TTTAAAGTTGAATTCAAAAG+AGG + Chr5:88646420-88646439 MsG0580028916.01.T01:intron 20.0%
!!! TTTTTTCTTACAATTCTCTT+TGG - Chr5:88645627-88645646 None:intergenic 20.0%
! AAACAAACCAATAGTTGATT+AGG + Chr5:88648841-88648860 MsG0580028916.01.T01:intron 25.0%
! AAACAATACATCACTAAAGA+TGG - Chr5:88648551-88648570 None:intergenic 25.0%
! AACCAAAATAGTTTATGAAC+TGG - Chr5:88647008-88647027 None:intergenic 25.0%
! AAGAGATTTGCATTAATCAT+TGG + Chr5:88646025-88646044 MsG0580028916.01.T01:CDS 25.0%
! AAGTAACCGACTATTAAAAA+TGG + Chr5:88648415-88648434 MsG0580028916.01.T01:intron 25.0%
! AATAGAATAAGTAAGAGCAA+TGG - Chr5:88649016-88649035 None:intergenic 25.0%
! AATGAAAACTTTGAACAATG+GGG - Chr5:88644408-88644427 None:intergenic 25.0%
! ACAACCATAATAAAAAAGAG+TGG - Chr5:88648456-88648475 None:intergenic 25.0%
! ACAATGCATTATAATATGCA+GGG + Chr5:88647778-88647797 MsG0580028916.01.T01:intron 25.0%
! ACATGTGATCAAAATTCAAA+GGG - Chr5:88645942-88645961 None:intergenic 25.0%
! AGAATGAAAACTTTGAACAA+TGG - Chr5:88644410-88644429 None:intergenic 25.0%
! AGGAATTAATTGAAGAGTAA+TGG + Chr5:88645305-88645324 MsG0580028916.01.T01:intron 25.0%
! ATCTTATTAACTCTAATAGG+TGG + Chr5:88647486-88647505 MsG0580028916.01.T01:intron 25.0%
! CAACCATAATAAAAAAGAGT+GGG - Chr5:88648455-88648474 None:intergenic 25.0%
! CCAAGAAAAAACGTTTAAAA+GGG - Chr5:88650427-88650446 None:intergenic 25.0%
! CCAATAACAACAACAAAAAA+TGG + Chr5:88644507-88644526 MsG0580028916.01.T01:exon 25.0%
! CGCTAATCATTATCATTATT+AGG + Chr5:88647454-88647473 MsG0580028916.01.T01:intron 25.0%
! GAATGAAAACTTTGAACAAT+GGG - Chr5:88644409-88644428 None:intergenic 25.0%
! GCAGGTAAATAAGTTAAATT+AGG + Chr5:88646270-88646289 MsG0580028916.01.T01:intron 25.0%
! GTCACATAGTATTAATTGAA+GGG - Chr5:88648787-88648806 None:intergenic 25.0%
! GTGATATGTAATTTGGATAT+AGG + Chr5:88651046-88651065 MsG0580028916.01.T01:intron 25.0%
! TAATGATGTAAACAATTGCA+TGG + Chr5:88651424-88651443 MsG0580028916.01.T01:three_prime_UTR 25.0%
! TAGAATCCGAAATATTCATA+TGG - Chr5:88649180-88649199 None:intergenic 25.0%
! TCCAAGAAAAAACGTTTAAA+AGG - Chr5:88650428-88650447 None:intergenic 25.0%
! TCTATACATGTTAAGATAAC+TGG + Chr5:88647880-88647899 MsG0580028916.01.T01:intron 25.0%
! TCTTAATTCTTAACACAAGA+GGG - Chr5:88649514-88649533 None:intergenic 25.0%
! TCTTATTAACTCTAATAGGT+GGG + Chr5:88647487-88647506 MsG0580028916.01.T01:intron 25.0%
! TGAATTGATTATGTTAGCTA+AGG - Chr5:88646167-88646186 None:intergenic 25.0%
! TGGAGTTTATTAGCATTAAT+TGG + Chr5:88647900-88647919 MsG0580028916.01.T01:intron 25.0%
! TGTAATTATGTGTATCATGT+CGG - Chr5:88650919-88650938 None:intergenic 25.0%
! TGTCACATAGTATTAATTGA+AGG - Chr5:88648788-88648807 None:intergenic 25.0%
! TTACAAATTACAAATTGGCA+TGG - Chr5:88645520-88645539 None:intergenic 25.0%
! TTCATTCTAAGCAAATCATA+GGG + Chr5:88644422-88644441 MsG0580028916.01.T01:five_prime_UTR 25.0%
! TTGAAAAAATCTCAGTAGAA+GGG + Chr5:88649748-88649767 MsG0580028916.01.T01:intron 25.0%
! TTTCATTCTAAGCAAATCAT+AGG + Chr5:88644421-88644440 MsG0580028916.01.T01:five_prime_UTR 25.0%
! TTTCTAATCTGAAAAAAGCA+AGG - Chr5:88649482-88649501 None:intergenic 25.0%
!! ATAAAAGTACAAATTGAGGA+AGG + Chr5:88651085-88651104 MsG0580028916.01.T01:CDS 25.0%
!! ATAGAATTTTGGATTTTGAG+GGG - Chr5:88649792-88649811 None:intergenic 25.0%
!! ATTTAACTTATTTACCTGCA+CGG - Chr5:88646269-88646288 None:intergenic 25.0%
!! ATTTTTACGAAAATGTCCAT+GGG + Chr5:88649355-88649374 MsG0580028916.01.T01:intron 25.0%
!! GATAGAATTTTGGATTTTGA+GGG - Chr5:88649793-88649812 None:intergenic 25.0%
!! GTAATTTGTAAACATTGACT+TGG + Chr5:88645529-88645548 MsG0580028916.01.T01:intron 25.0%
!! TAAAAGTACAAATTGAGGAA+GGG + Chr5:88651086-88651105 MsG0580028916.01.T01:CDS 25.0%
!! TGAGATAAAAGTACAAATTG+AGG + Chr5:88651081-88651100 MsG0580028916.01.T01:CDS 25.0%
!! TGATAGAATTTTGGATTTTG+AGG - Chr5:88649794-88649813 None:intergenic 25.0%
!! TTAGCATTAATTGGTTAGTT+AGG + Chr5:88647909-88647928 MsG0580028916.01.T01:intron 25.0%
!! TTCAATTTTATTGACGCAAA+TGG + Chr5:88650572-88650591 MsG0580028916.01.T01:intron 25.0%
!! TTCTTTTTGTACCAAAAAGA+AGG + Chr5:88646857-88646876 MsG0580028916.01.T01:intron 25.0%
!! TTTTAATAACATCCTCCAAA+TGG - Chr5:88649277-88649296 None:intergenic 25.0%
!!! AAAGTTTGATATTGATTTGG+TGG + Chr5:88647581-88647600 MsG0580028916.01.T01:intron 25.0%
!!! AATACACTTTAGAACATTAC+AGG - Chr5:88648655-88648674 None:intergenic 25.0%
!!! AATGTTTTGTTGAAAAAGTG+TGG + Chr5:88644934-88644953 MsG0580028916.01.T01:CDS 25.0%
!!! AATTACCTGACTTATTTTGT+TGG + Chr5:88645968-88645987 MsG0580028916.01.T01:intron 25.0%
!!! AGATTTTTTCAACAATCAGT+TGG - Chr5:88649740-88649759 None:intergenic 25.0%
!!! ATGACTTTTTTTCTTTTGAC+CGG - Chr5:88645439-88645458 None:intergenic 25.0%
!!! ATGTTTTGTTGAAAAAGTGT+GGG + Chr5:88644935-88644954 MsG0580028916.01.T01:CDS 25.0%
!!! CCATTTTTTGTTGTTGTTAT+TGG - Chr5:88644510-88644529 None:intergenic 25.0%
!!! GATAATTCTCCAATTTTTAG+AGG + Chr5:88650446-88650465 MsG0580028916.01.T01:intron 25.0%
!!! GTAGTCTTTTTTTTTTTTGG+TGG + Chr5:88647964-88647983 MsG0580028916.01.T01:intron 25.0%
!!! GTTGGATTTTTTCAGATTTT+CGG - Chr5:88649722-88649741 None:intergenic 25.0%
!!! TATTTTTACGAAAATGTCCA+TGG + Chr5:88649354-88649373 MsG0580028916.01.T01:intron 25.0%
!!! TCATATTTGGATTAGTTGTT+TGG - Chr5:88649064-88649083 None:intergenic 25.0%
!!! TCTTTTTTTTTTTTGGTGGT+TGG + Chr5:88647968-88647987 MsG0580028916.01.T01:intron 25.0%
!!! TTAATCATTGGTTTATTAGC+AGG + Chr5:88646037-88646056 MsG0580028916.01.T01:CDS 25.0%
!!! TTTCAAGTATGTTTTTCTTC+CGG + Chr5:88645417-88645436 MsG0580028916.01.T01:intron 25.0%
!!! TTTTTTTTGGAAACTCAGTA+TGG + Chr5:88647620-88647639 MsG0580028916.01.T01:intron 25.0%
AAAAAAGAATGTGCAAGATG+GGG + Chr5:88646466-88646485 MsG0580028916.01.T01:intron 30.0%
AAAACATCATGAAGCAAAAG+AGG - Chr5:88646370-88646389 None:intergenic 30.0%
ACAAAAAAGAATGTGCAAGA+TGG + Chr5:88646464-88646483 MsG0580028916.01.T01:intron 30.0%
AGCAATGAGAATAACAAGTA+TGG - Chr5:88646068-88646087 None:intergenic 30.0%
AGTACAAACACTTAGATAGA+TGG + Chr5:88650658-88650677 MsG0580028916.01.T01:intron 30.0%
ATCCATGTTACAAATATGCT+CGG - Chr5:88649572-88649591 None:intergenic 30.0%
ATGATATATGCAAAAGGTTG+AGG - Chr5:88648003-88648022 None:intergenic 30.0%
ATGATATGATGTGATGTTAG+TGG + Chr5:88646970-88646989 MsG0580028916.01.T01:intron 30.0%
ATTAGGAGACTAATAACTTG+AGG - Chr5:88647329-88647348 None:intergenic 30.0%
CAAAAAAGAATGTGCAAGAT+GGG + Chr5:88646465-88646484 MsG0580028916.01.T01:intron 30.0%
CAAGATATTGCTTAATCCAA+TGG - Chr5:88646215-88646234 None:intergenic 30.0%
CAATGCATGATATATGCAAA+AGG - Chr5:88648009-88648028 None:intergenic 30.0%
CACATGTGATCAAAATTCAA+AGG - Chr5:88645943-88645962 None:intergenic 30.0%
CATAACTTTGTAAAGTGGAA+AGG - Chr5:88646558-88646577 None:intergenic 30.0%
CTAAAGAAAACTCTCTTGAA+AGG + Chr5:88647281-88647300 MsG0580028916.01.T01:intron 30.0%
CTAATGGCTGAAACTATATT+TGG + Chr5:88650398-88650417 MsG0580028916.01.T01:intron 30.0%
CTCTTAATTCTTAACACAAG+AGG - Chr5:88649515-88649534 None:intergenic 30.0%
CTGAAAATCAAACCTATAGT+TGG - Chr5:88647252-88647271 None:intergenic 30.0%
CTTGAAAGAAAACCAACTAT+AGG + Chr5:88647237-88647256 MsG0580028916.01.T01:intron 30.0%
CTTGTTAGGGAAAAGTAAAT+CGG + Chr5:88648336-88648355 MsG0580028916.01.T01:intron 30.0%
GACAATGCATTATAATATGC+AGG + Chr5:88647777-88647796 MsG0580028916.01.T01:intron 30.0%
GATCAATTCAAAGAACATTC+TGG + Chr5:88650278-88650297 MsG0580028916.01.T01:intron 30.0%
GTTGAAAAAATCTCAGTAGA+AGG + Chr5:88649747-88649766 MsG0580028916.01.T01:intron 30.0%
TAGGTATCCAAAAAGTTCAA+AGG - Chr5:88646689-88646708 None:intergenic 30.0%
TCAGATTATACAATCCGAAT+AGG + Chr5:88649449-88649468 MsG0580028916.01.T01:intron 30.0%
TCGGATTGTATAATCTGAAT+TGG - Chr5:88649447-88649466 None:intergenic 30.0%
TCTATAATCCAAACACAGTT+CGG - Chr5:88650046-88650065 None:intergenic 30.0%
TCTCTACACAATTCTGTATT+AGG - Chr5:88647346-88647365 None:intergenic 30.0%
TGATAAAGAAAGAAAAAGGG+TGG - Chr5:88644566-88644585 None:intergenic 30.0%
TGATATATGCAAAAGGTTGA+GGG - Chr5:88648002-88648021 None:intergenic 30.0%
TGTGAAATTGGATCAGATTA+AGG + Chr5:88651234-88651253 MsG0580028916.01.T01:CDS 30.0%
TGTGATGAAGAATCAATGTT+TGG + Chr5:88651447-88651466 MsG0580028916.01.T01:three_prime_UTR 30.0%
TGTTATGCAAGATATTCTAC+CGG + Chr5:88645189-88645208 MsG0580028916.01.T01:CDS 30.0%
TTACAACTTATATTTGAGCC+CGG - Chr5:88646910-88646929 None:intergenic 30.0%
TTAGTGATTTGATACTCTTC+CGG - Chr5:88650382-88650401 None:intergenic 30.0%
TTGAAAACTGGATTTCAACT+GGG - Chr5:88649668-88649687 None:intergenic 30.0%
TTTCATGGATGAGAAACATA+TGG - Chr5:88648579-88648598 None:intergenic 30.0%
TTTCGAACTTTATGCGATTT+AGG - Chr5:88651310-88651329 None:intergenic 30.0%
! AATGATCGAGAAAACTTGTT+AGG + Chr5:88648322-88648341 MsG0580028916.01.T01:intron 30.0%
! AATTGAAGAGTAATGGAGAT+TGG + Chr5:88645312-88645331 MsG0580028916.01.T01:intron 30.0%
! AATTGGGCCTATACATTTTT+GGG - Chr5:88650187-88650206 None:intergenic 30.0%
! ACCAAAATGTTTATGGGTTT+TGG - Chr5:88650071-88650090 None:intergenic 30.0%
! AGATTATGGAGATTTGTTCT+TGG + Chr5:88645161-88645180 MsG0580028916.01.T01:CDS 30.0%
! ATTGAAGAGTAATGGAGATT+GGG + Chr5:88645313-88645332 MsG0580028916.01.T01:intron 30.0%
! CTAACTACAAAGTACCTATA+CGG - Chr5:88650805-88650824 None:intergenic 30.0%
! GATTATGGAGATTTGTTCTT+GGG + Chr5:88645162-88645181 MsG0580028916.01.T01:CDS 30.0%
! GGGTCTAAATGATAGAATTT+TGG - Chr5:88649803-88649822 None:intergenic 30.0%
! TCCAAAACCCATAAACATTT+TGG + Chr5:88650067-88650086 MsG0580028916.01.T01:intron 30.0%
! TGTAGCACATATACTTTTGA+TGG + Chr5:88650850-88650869 MsG0580028916.01.T01:intron 30.0%
! TGTGTTGATAGGAGTAAAAA+TGG + Chr5:88651373-88651392 MsG0580028916.01.T01:three_prime_UTR 30.0%
! TTCTTCTAGTTATGGTCTTA+TGG - Chr5:88650221-88650240 None:intergenic 30.0%
! TTTTTGTACCAAAAAGAAGG+CGG + Chr5:88646860-88646879 MsG0580028916.01.T01:intron 30.0%
!! AAACGACACTCATTTTGAAA+CGG - Chr5:88648687-88648706 None:intergenic 30.0%
!! ACTTTAGAACATTACAGGAA+TGG - Chr5:88648650-88648669 None:intergenic 30.0%
!! ATGATCGAGAAAACTTGTTA+GGG + Chr5:88648323-88648342 MsG0580028916.01.T01:intron 30.0%
!! ATTTTGAGGATATGAGAAGT+TGG - Chr5:88650512-88650531 None:intergenic 30.0%
!! CTTTGAATTTTGATCACATG+TGG + Chr5:88645941-88645960 MsG0580028916.01.T01:intron 30.0%
!! GAAGAGTATCAAATCACTAA+TGG + Chr5:88650382-88650401 MsG0580028916.01.T01:intron 30.0%
!! GTTTTGGGTGATATGTAATT+TGG + Chr5:88651039-88651058 MsG0580028916.01.T01:intron 30.0%
!! TTCCTTAATTTGTGTGCAAT+TGG + Chr5:88648907-88648926 MsG0580028916.01.T01:intron 30.0%
!! TTTTGAGGATATGAGAAGTT+GGG - Chr5:88650511-88650530 None:intergenic 30.0%
!!! CCCTTTTAAACGTTTTTTCT+TGG + Chr5:88650424-88650443 MsG0580028916.01.T01:intron 30.0%
!!! TATGACAATGCTACTTTTCT+AGG + Chr5:88644898-88644917 MsG0580028916.01.T01:CDS 30.0%
!!! TCTTTTTTGTATCCTCTTCA+AGG - Chr5:88646454-88646473 None:intergenic 30.0%
AAAAGAAGTAGAAGCAGCAA+AGG - Chr5:88645276-88645295 None:intergenic 35.0%
AATAACATCCTCCAAATGGT+GGG - Chr5:88649273-88649292 None:intergenic 35.0%
ACAACTAGCAATGACTTGAA+AGG - Chr5:88649634-88649653 None:intergenic 35.0%
ACCCAACAAGACATAATCTA+TGG + Chr5:88644742-88644761 MsG0580028916.01.T01:CDS 35.0%
ACCTGAATAAGTGAAATGTC+TGG - Chr5:88647818-88647837 None:intergenic 35.0%
AGCCAATTGCACACAAATTA+AGG - Chr5:88648912-88648931 None:intergenic 35.0%
AGGACGCATAAGAAATAGAT+AGG - Chr5:88649322-88649341 None:intergenic 35.0%
ATCCTCAAAATCAATGTTCC+AGG + Chr5:88650521-88650540 MsG0580028916.01.T01:intron 35.0%
ATGATGTAGTAAAGTGGAAG+TGG + Chr5:88646813-88646832 MsG0580028916.01.T01:intron 35.0%
ATTAAGGCACATGTGGAAAA+TGG + Chr5:88651250-88651269 MsG0580028916.01.T01:CDS 35.0%
ATTATTTGTGCTTGACTGCA+TGG - Chr5:88646782-88646801 None:intergenic 35.0%
ATTCATCACTTTCGTTGTAC+CGG + Chr5:88650360-88650379 MsG0580028916.01.T01:intron 35.0%
ATTGCCTGAGAATGTGAAAT+TGG + Chr5:88651222-88651241 MsG0580028916.01.T01:CDS 35.0%
CAACAATGTCCTACATCAAT+AGG + Chr5:88650890-88650909 MsG0580028916.01.T01:intron 35.0%
CATGAAAATGCACGAATAAG+CGG + Chr5:88647115-88647134 MsG0580028916.01.T01:intron 35.0%
CATGTGCTTCTCTTCATATT+TGG - Chr5:88649077-88649096 None:intergenic 35.0%
CCAAACATGATGTAGTAAAG+TGG + Chr5:88646807-88646826 MsG0580028916.01.T01:intron 35.0%
CCACTTTACTACATCATGTT+TGG - Chr5:88646810-88646829 None:intergenic 35.0%
CCATAATAAAAAAGAGTGGG+TGG - Chr5:88648452-88648471 None:intergenic 35.0%
CTTCTAGCCTATTTAGTACT+AGG + Chr5:88650161-88650180 MsG0580028916.01.T01:intron 35.0%
CTTGAAAACTGGATTTCAAC+TGG - Chr5:88649669-88649688 None:intergenic 35.0%
CTTTCTTGAGCAAGATTTGT+AGG + Chr5:88646086-88646105 MsG0580028916.01.T01:CDS 35.0%
GATGTTAGTGGTAGTTACTT+AGG + Chr5:88646982-88647001 MsG0580028916.01.T01:intron 35.0%
GATTTAGGTGATGCATCTTT+AGG - Chr5:88651295-88651314 None:intergenic 35.0%
GGACGCATAAGAAATAGATA+GGG - Chr5:88649321-88649340 None:intergenic 35.0%
TAATAAAAAAGAGTGGGTGG+AGG - Chr5:88648449-88648468 None:intergenic 35.0%
TAATAACATCCTCCAAATGG+TGG - Chr5:88649274-88649293 None:intergenic 35.0%
TACTAGGCCCAAAAATGTAT+AGG + Chr5:88650177-88650196 MsG0580028916.01.T01:intron 35.0%
TATAGAATCCGAAAATCCCA+TGG - Chr5:88649374-88649393 None:intergenic 35.0%
TCATAGAGGAAGTCCATATA+CGG - Chr5:88646335-88646354 None:intergenic 35.0%
TCCAGACATTTCACTTATTC+AGG + Chr5:88647814-88647833 MsG0580028916.01.T01:intron 35.0%
TCTGATGTTTGTATCCGTAT+AGG + Chr5:88650788-88650807 MsG0580028916.01.T01:intron 35.0%
TGAGCAAATAGCTTGAAAAC+TGG - Chr5:88649680-88649699 None:intergenic 35.0%
TGATCAAATCTCACCGTATA+TGG + Chr5:88646319-88646338 MsG0580028916.01.T01:intron 35.0%
TGATCCAATTTCACATTCTC+AGG - Chr5:88651229-88651248 None:intergenic 35.0%
TTCGGATTCTATCTCCTAAA+TGG + Chr5:88649189-88649208 MsG0580028916.01.T01:intron 35.0%
TTTGAGGATATGAGAAGTTG+GGG - Chr5:88650510-88650529 None:intergenic 35.0%
! ATAGATTATGTCTTGTTGGG+TGG - Chr5:88644743-88644762 None:intergenic 35.0%
! ATATGCGCCTTTGAACTTTT+TGG + Chr5:88646679-88646698 MsG0580028916.01.T01:intron 35.0%
! CAATTGGGCCTATACATTTT+TGG - Chr5:88650188-88650207 None:intergenic 35.0%
! CATTTTTCCACCTCAAAACA+CGG - Chr5:88649415-88649434 None:intergenic 35.0%
! CCAGAGTATCCTCTAAAAAT+TGG - Chr5:88650458-88650477 None:intergenic 35.0%
! CTGGAAAAGGAGATTTTTCA+AGG + Chr5:88651191-88651210 MsG0580028916.01.T01:CDS 35.0%
! CTTCTAGGTTCTTCTAGTTA+TGG - Chr5:88650229-88650248 None:intergenic 35.0%
! GAAAATGTCCATGGGATTTT+CGG + Chr5:88649363-88649382 MsG0580028916.01.T01:intron 35.0%
! GCACATATACTTTTGATGGA+AGG + Chr5:88650854-88650873 MsG0580028916.01.T01:intron 35.0%
! GCCATAGATTATGTCTTGTT+GGG - Chr5:88644746-88644765 None:intergenic 35.0%
! GCTTATTCGTGCATTTTCAT+GGG - Chr5:88647116-88647135 None:intergenic 35.0%
! GGCCAGTTCATAAACTATTT+TGG + Chr5:88647003-88647022 MsG0580028916.01.T01:intron 35.0%
! TCTTTCAAGAGAGTTTTCTG+TGG - Chr5:88647226-88647245 None:intergenic 35.0%
! TCTTTTACGTTGATCAGAGT+GGG - Chr5:88648608-88648627 None:intergenic 35.0%
! TTCTTTTACGTTGATCAGAG+TGG - Chr5:88648609-88648628 None:intergenic 35.0%
! TTTTGGGCCTAGTACTAAAT+AGG - Chr5:88650171-88650190 None:intergenic 35.0%
!! AAACATTGACTTGGAGAATG+TGG + Chr5:88645538-88645557 MsG0580028916.01.T01:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + Chr5:88648933-88648952 MsG0580028916.01.T01:intron 35.0%
!! CCAATTTTTAGAGGATACTC+TGG + Chr5:88650455-88650474 MsG0580028916.01.T01:intron 35.0%
!!! ACCTGACTTATTTTGTTGGA+TGG + Chr5:88645972-88645991 MsG0580028916.01.T01:intron 35.0%
!!! CCACCCACTCTTTTTTATTA+TGG + Chr5:88648449-88648468 MsG0580028916.01.T01:intron 35.0%
!!! TACCTGGAACATTGATTTTG+AGG - Chr5:88650526-88650545 None:intergenic 35.0%
AAACACAGTTCGGATGTGTT+TGG - Chr5:88650036-88650055 None:intergenic 40.0%
AAACACATCCGAACTGTGTT+TGG + Chr5:88650035-88650054 MsG0580028916.01.T01:intron 40.0%
AACACGGAGAAAACTCACTT+CGG - Chr5:88649399-88649418 None:intergenic 40.0%
AAGCTTAACAGTTTAGTGCC+GGG + Chr5:88646889-88646908 MsG0580028916.01.T01:intron 40.0%
ACATGAGAAAGAACCCAAGA+TGG - Chr5:88645251-88645270 None:intergenic 40.0%
ACCACAAACCTCTACCTATA+CGG + Chr5:88644595-88644614 MsG0580028916.01.T01:CDS 40.0%
ACTAGCAATGACTTGAAAGG+AGG - Chr5:88649631-88649650 None:intergenic 40.0%
AGCAAGATTTGTAGGAGACA+GGG + Chr5:88646094-88646113 MsG0580028916.01.T01:CDS 40.0%
AGGCATACGAGAAGTAGAAA+GGG + Chr5:88650101-88650120 MsG0580028916.01.T01:intron 40.0%
AGGTGTGAAAGAGGAGAATT+TGG + Chr5:88651132-88651151 MsG0580028916.01.T01:CDS 40.0%
ATACGGTGAGATTTGATCAG+TGG - Chr5:88646318-88646337 None:intergenic 40.0%
ATGCAAGATATTCTACCGGT+GGG + Chr5:88645193-88645212 MsG0580028916.01.T01:CDS 40.0%
ATTAGGTTTGTGACGCTTAG+TGG + Chr5:88646287-88646306 MsG0580028916.01.T01:intron 40.0%
ATTTGGGAAAGGACGTTGTT+TGG + Chr5:88651149-88651168 MsG0580028916.01.T01:CDS 40.0%
CATGAGAAAGAACCCAAGAT+GGG - Chr5:88645250-88645269 None:intergenic 40.0%
CCCTCGCCATATGAATATTT+CGG + Chr5:88649171-88649190 MsG0580028916.01.T01:intron 40.0%
CCGAAATATTCATATGGCGA+GGG - Chr5:88649174-88649193 None:intergenic 40.0%
GAAAGAGGAGAATTTGGGAA+AGG + Chr5:88651138-88651157 MsG0580028916.01.T01:CDS 40.0%
GAAGCTTAACAGTTTAGTGC+CGG + Chr5:88646888-88646907 MsG0580028916.01.T01:intron 40.0%
GACCGAGCATATTTGTAACA+TGG + Chr5:88649567-88649586 MsG0580028916.01.T01:intron 40.0%
GAGGGTTGGGATAATTAGTA+TGG - Chr5:88649609-88649628 None:intergenic 40.0%
GATTGTGGTACTGCAGATTA+TGG + Chr5:88645147-88645166 MsG0580028916.01.T01:CDS 40.0%
GATTGTGTTGTAGAAGCGAT+CGG + Chr5:88645111-88645130 MsG0580028916.01.T01:CDS 40.0%
GCAGGAAAATTGGGTATAGT+AGG + Chr5:88645998-88646017 MsG0580028916.01.T01:intron 40.0%
GCCATCCAACAAAATAAGTC+AGG - Chr5:88645976-88645995 None:intergenic 40.0%
GGCCATAGATTATGTCTTGT+TGG - Chr5:88644747-88644766 None:intergenic 40.0%
GGTGTGAAAGAGGAGAATTT+GGG + Chr5:88651133-88651152 MsG0580028916.01.T01:CDS 40.0%
GTCTGCTTCGTAGTTAGAAT+TGG + Chr5:88650998-88651017 MsG0580028916.01.T01:intron 40.0%
TACGGTGAGATTTGATCAGT+GGG - Chr5:88646317-88646336 None:intergenic 40.0%
TAGTAAAGTGGAAGTGGAAG+TGG + Chr5:88646819-88646838 MsG0580028916.01.T01:intron 40.0%
TATGCAAGATATTCTACCGG+TGG + Chr5:88645192-88645211 MsG0580028916.01.T01:CDS 40.0%
TATGGAACGTGACAGCAATT+GGG - Chr5:88650203-88650222 None:intergenic 40.0%
TCCGAAATATTCATATGGCG+AGG - Chr5:88649175-88649194 None:intergenic 40.0%
TTATGGAACGTGACAGCAAT+TGG - Chr5:88650204-88650223 None:intergenic 40.0%
TTGAGGTATGTCGAGTGTAA+TGG - Chr5:88647312-88647331 None:intergenic 40.0%
! CGCTTATTCGTGCATTTTCA+TGG - Chr5:88647117-88647136 None:intergenic 40.0%
! GAATTGAGGTTTGACTCGTA+GGG - Chr5:88644655-88644674 None:intergenic 40.0%
! TGAATTGAGGTTTGACTCGT+AGG - Chr5:88644656-88644675 None:intergenic 40.0%
! TGAGTTTTCTCCGTGTTTTG+AGG + Chr5:88649402-88649421 MsG0580028916.01.T01:intron 40.0%
! TGTACTGGGGATCTTAGTTT+TGG + Chr5:88645078-88645097 MsG0580028916.01.T01:CDS 40.0%
!! AAAGTGAGAGTGTCATTACC+TGG - Chr5:88650542-88650561 None:intergenic 40.0%
!! GTACTGGGGATCTTAGTTTT+GGG + Chr5:88645079-88645098 MsG0580028916.01.T01:CDS 40.0%
!! TATTTTGTTGGATGGCTTGC+AGG + Chr5:88645980-88645999 MsG0580028916.01.T01:intron 40.0%
!!! CAATGCTACTTTTCTAGGAG+TGG + Chr5:88644903-88644922 MsG0580028916.01.T01:CDS 40.0%
!!! CAGCGTTTGTCGTTTTTTTC+AGG + Chr5:88645485-88645504 MsG0580028916.01.T01:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - Chr5:88648956-88648937 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+TGG + Chr5:88648937-88648956 MsG0580028916.01.T01:intron 40.0%
!!! TACTGGGGATCTTAGTTTTG+GGG + Chr5:88645080-88645099 MsG0580028916.01.T01:CDS 40.0%
AACTAAGATCCCCAGTACAC+TGG - Chr5:88645077-88645096 None:intergenic 45.0%
ACAAACCTCTACCTATACGG+TGG + Chr5:88644598-88644617 MsG0580028916.01.T01:CDS 45.0%
ACAACAACTTCACCGTCCTA+GGG + Chr5:88644716-88644735 MsG0580028916.01.T01:CDS 45.0%
ACCGTATAGGTAGAGGTTTG+TGG - Chr5:88644599-88644618 None:intergenic 45.0%
ACTAAGATCCCCAGTACACT+GGG - Chr5:88645076-88645095 None:intergenic 45.0%
AGCAATGACTTGAAAGGAGG+AGG - Chr5:88649628-88649647 None:intergenic 45.0%
ATATGGCGAGGGAAAAGTGA+AGG - Chr5:88649163-88649182 None:intergenic 45.0%
ATGGGCCTTAGACGTATCAT+GGG - Chr5:88645220-88645239 None:intergenic 45.0%
CAGTAGAAGGGACTTCTTAC+CGG + Chr5:88649760-88649779 MsG0580028916.01.T01:intron 45.0%
GAGCAAGATTTGTAGGAGAC+AGG + Chr5:88646093-88646112 MsG0580028916.01.T01:CDS 45.0%
GAGGACTTTGAACCTTGAAG+AGG + Chr5:88646439-88646458 MsG0580028916.01.T01:intron 45.0%
GAGGCATACGAGAAGTAGAA+AGG + Chr5:88650100-88650119 MsG0580028916.01.T01:intron 45.0%
GCAATGACTTGAAAGGAGGA+GGG - Chr5:88649627-88649646 None:intergenic 45.0%
GGAAAGCAGCTAGAATCTCT+TGG - Chr5:88646537-88646556 None:intergenic 45.0%
GGACGGTTGAAAAGTGATTG+TGG + Chr5:88645132-88645151 MsG0580028916.01.T01:CDS 45.0%
GGATCAGATTAAGGCACATG+TGG + Chr5:88651243-88651262 MsG0580028916.01.T01:CDS 45.0%
GGCACAAAAGCAACTCATAG+AGG - Chr5:88646349-88646368 None:intergenic 45.0%
GGCTATAATCCAGAAGCCAT+GGG + Chr5:88644967-88644986 MsG0580028916.01.T01:CDS 45.0%
GTGAGCTTAACTCAGTTGGT+AGG - Chr5:88648033-88648052 None:intergenic 45.0%
TACAACAACTTCACCGTCCT+AGG + Chr5:88644715-88644734 MsG0580028916.01.T01:CDS 45.0%
TACGAGAAGTAGAAAGGGTG+TGG + Chr5:88650106-88650125 MsG0580028916.01.T01:intron 45.0%
TAGGACGGTGAAGTTGTTGT+AGG - Chr5:88644716-88644735 None:intergenic 45.0%
TATGGCCTATATCAATGCCG+TGG + Chr5:88644760-88644779 MsG0580028916.01.T01:CDS 45.0%
TATGGCGAGGGAAAAGTGAA+GGG - Chr5:88649162-88649181 None:intergenic 45.0%
TGCAAGATATTCTACCGGTG+GGG + Chr5:88645194-88645213 MsG0580028916.01.T01:CDS 45.0%
TTGTACCAAAAAGAAGGCGG+TGG + Chr5:88646863-88646882 MsG0580028916.01.T01:intron 45.0%
! AAAATAGGGCACCCACCATT+TGG + Chr5:88649259-88649278 MsG0580028916.01.T01:intron 45.0%
! ATTTTGCACGTGAGAGGAGA+AGG + Chr5:88651112-88651131 MsG0580028916.01.T01:CDS 45.0%
! CTTGTATCTTGTTTCCGTGC+AGG + Chr5:88646252-88646271 MsG0580028916.01.T01:intron 45.0%
! GAAGAGTAATGGAGATTGGG+TGG + Chr5:88645316-88645335 MsG0580028916.01.T01:intron 45.0%
! GGATGGCTTGCAGGAAAATT+GGG + Chr5:88645989-88646008 MsG0580028916.01.T01:intron 45.0%
! TGGATGGCTTGCAGGAAAAT+TGG + Chr5:88645988-88646007 MsG0580028916.01.T01:intron 45.0%
! TGTCGGTGTCCTATTGATGT+AGG - Chr5:88650902-88650921 None:intergenic 45.0%
! TGTTGCTGAGTTGACTAGTG+AGG - Chr5:88644686-88644705 None:intergenic 45.0%
! TTCTACCACCGCCTTCTTTT+TGG - Chr5:88646871-88646890 None:intergenic 45.0%
! TTTGACTCGTAGGGTGAGTT+TGG - Chr5:88644646-88644665 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - Chr5:88648955-88648936 None:intergenic 45.0%
!!! GTTTTCTCCGTGTTTTGAGG+TGG + Chr5:88649405-88649424 MsG0580028916.01.T01:intron 45.0%
!!! TGCTACTTTTCTAGGAGTGG+AGG + Chr5:88644906-88644925 MsG0580028916.01.T01:CDS 45.0%
!!! ACAAATTATATAATTTTTTT+TGG + Chr5:88647607-88647626 MsG0580028916.01.T01:intron 5.0%
!!! ATATTTTATAAATAAGAATT+AGG - Chr5:88646708-88646727 None:intergenic 5.0%
!!! TTTTAAAATTTGAAAATATA+TGG - Chr5:88649234-88649253 None:intergenic 5.0%
AGCAAGGAACGCAGCCTATT+CGG - Chr5:88649466-88649485 None:intergenic 50.0%
AGTGGAAGTGGAAGTGGTAG+TGG + Chr5:88646825-88646844 MsG0580028916.01.T01:intron 50.0%
ATGGCGAGGGAAAAGTGAAG+GGG - Chr5:88649161-88649180 None:intergenic 50.0%
CATGGGCCTTAGACGTATCA+TGG - Chr5:88645221-88645240 None:intergenic 50.0%
CATGTAGCTGAGAGAGGAAC+TGG + Chr5:88651172-88651191 MsG0580028916.01.T01:CDS 50.0%
CCAACTGAGTTAAGCTCACG+AGG + Chr5:88648034-88648053 MsG0580028916.01.T01:intron 50.0%
CCCATGGTAAAGCCCATCTT+GGG + Chr5:88645235-88645254 MsG0580028916.01.T01:intron 50.0%
CCTCGTGAGCTTAACTCAGT+TGG - Chr5:88648037-88648056 None:intergenic 50.0%
GACTTGAAAGGAGGAGGGTT+GGG - Chr5:88649622-88649641 None:intergenic 50.0%
GCTCAACAGCACTCTTGGAT+TGG + Chr5:88650477-88650496 MsG0580028916.01.T01:intron 50.0%
GCTGAGAGAGGAACTGGAAA+AGG + Chr5:88651178-88651197 MsG0580028916.01.T01:CDS 50.0%
GGATTTCAACTGGGACACGA+TGG - Chr5:88649659-88649678 None:intergenic 50.0%
GGCTTCTGGATTATAGCCCA+CGG - Chr5:88644965-88644984 None:intergenic 50.0%
GGGCTATAATCCAGAAGCCA+TGG + Chr5:88644966-88644985 MsG0580028916.01.T01:CDS 50.0%
GTGAGGTGAGGAGTGAATTG+AGG - Chr5:88644669-88644688 None:intergenic 50.0%
GTGTTGTAGAAGCGATCGGA+CGG + Chr5:88645115-88645134 MsG0580028916.01.T01:CDS 50.0%
GTTGTGTGCAACCACCGTAT+AGG - Chr5:88644612-88644631 None:intergenic 50.0%
GTTTGGCATGTAGCTGAGAG+AGG + Chr5:88651166-88651185 MsG0580028916.01.T01:CDS 50.0%
TCAAGAGATGCTGTGCTTGG+CGG + Chr5:88644991-88645010 MsG0580028916.01.T01:CDS 50.0%
TCTGGATTATAGCCCACGGA+AGG - Chr5:88644961-88644980 None:intergenic 50.0%
TGACTTGAAAGGAGGAGGGT+TGG - Chr5:88649623-88649642 None:intergenic 50.0%
TGCAACCACCGTATAGGTAG+AGG - Chr5:88644606-88644625 None:intergenic 50.0%
! AAAAAGTGTGGGCCTTCCGT+GGG + Chr5:88644946-88644965 MsG0580028916.01.T01:CDS 50.0%
! ACCCAAGATGGGCTTTACCA+TGG - Chr5:88645239-88645258 None:intergenic 50.0%
! CAGAGTGGGTTCGAGTTTCA+TGG - Chr5:88648594-88648613 None:intergenic 50.0%
! CATGATACGTCTAAGGCCCA+TGG + Chr5:88645219-88645238 MsG0580028916.01.T01:CDS 50.0%
! CCCAAGATGGGCTTTACCAT+GGG - Chr5:88645238-88645257 None:intergenic 50.0%
! CTGAGTTGACTAGTGAGGTG+AGG - Chr5:88644681-88644700 None:intergenic 50.0%
! GAGAGGAGAAGGTGTGAAAG+AGG + Chr5:88651123-88651142 MsG0580028916.01.T01:CDS 50.0%
! GAGTAATGGAGATTGGGTGG+TGG + Chr5:88645319-88645338 MsG0580028916.01.T01:intron 50.0%
! GGGAACATTTTGCACGTGAG+AGG + Chr5:88651106-88651125 MsG0580028916.01.T01:CDS 50.0%
!!! CCTTTTAGGGTTGGTGGTTC+GGG + Chr5:88645033-88645052 MsG0580028916.01.T01:CDS 50.0%
!!! GCCTTTTAGGGTTGGTGGTT+CGG + Chr5:88645032-88645051 MsG0580028916.01.T01:CDS 50.0%
!!! TTAGGTGGGCCTTTTAGGGT+TGG + Chr5:88645024-88645043 MsG0580028916.01.T01:CDS 50.0%
CAAGAGATGCTGTGCTTGGC+GGG + Chr5:88644992-88645011 MsG0580028916.01.T01:CDS 55.0%
CACAGCATCTCTTGAGCCCA+TGG - Chr5:88644986-88645005 None:intergenic 55.0%
CCCGAACCACCAACCCTAAA+AGG - Chr5:88645036-88645055 None:intergenic 55.0%
GCCCATGGTAAAGCCCATCT+TGG + Chr5:88645234-88645253 MsG0580028916.01.T01:intron 55.0%
GGCTCAAGAGATGCTGTGCT+TGG + Chr5:88644988-88645007 MsG0580028916.01.T01:CDS 55.0%
TCACCAAACAACCGTCGAGC+TGG - Chr5:88644876-88644895 None:intergenic 55.0%
TCTCTTGAGCCCATGGCTTC+TGG - Chr5:88644979-88644998 None:intergenic 55.0%
TGGCGAGGGAAAAGTGAAGG+GGG - Chr5:88649160-88649179 None:intergenic 55.0%
TGGGGCCCATGATACGTCTA+AGG + Chr5:88645212-88645231 MsG0580028916.01.T01:CDS 55.0%
TTGTTGGGTGGACCCTAGGA+CGG - Chr5:88644731-88644750 None:intergenic 55.0%
! ATAGGGCACCCACCATTTGG+AGG + Chr5:88649262-88649281 MsG0580028916.01.T01:intron 55.0%
! CTCTGGCTCAACAGCACTCT+TGG + Chr5:88650472-88650491 MsG0580028916.01.T01:intron 55.0%
! GAAAAAGTGTGGGCCTTCCG+TGG + Chr5:88644945-88644964 MsG0580028916.01.T01:CDS 55.0%
! GGGCTTAGGTGGGCCTTTTA+GGG + Chr5:88645020-88645039 MsG0580028916.01.T01:CDS 55.0%
! TGGGCTTAGGTGGGCCTTTT+AGG + Chr5:88645019-88645038 MsG0580028916.01.T01:CDS 55.0%
! TGTCTTGTTGGGTGGACCCT+AGG - Chr5:88644735-88644754 None:intergenic 55.0%
!! GGATTTTGAGGGGCGAAGTC+CGG - Chr5:88649782-88649801 None:intergenic 55.0%
!! GGTCGCCACGGCATTGATAT+AGG - Chr5:88644768-88644787 None:intergenic 55.0%
!! GTGGTGTTGCCCAGTGTACT+GGG + Chr5:88645064-88645083 MsG0580028916.01.T01:CDS 55.0%
!! TAGGGTTGGTGGTTCGGGTA+CGG + Chr5:88645038-88645057 MsG0580028916.01.T01:CDS 55.0%
!! TGGTGTTGCCCAGTGTACTG+GGG + Chr5:88645065-88645084 MsG0580028916.01.T01:CDS 55.0%
AGACGTATCATGGGCCCCAC+CGG - Chr5:88645211-88645230 None:intergenic 60.0%
GACATGTGTCGCGACTCGTG+CGG + Chr5:88644841-88644860 MsG0580028916.01.T01:CDS 60.0%
GGTCCAGCTCGACGGTTGTT+TGG + Chr5:88644870-88644889 MsG0580028916.01.T01:CDS 60.0%
!! CGTGGTGTTGCCCAGTGTAC+TGG + Chr5:88645063-88645082 MsG0580028916.01.T01:CDS 60.0%
!!! GGTGGGCCTTTTAGGGTTGG+TGG + Chr5:88645027-88645046 MsG0580028916.01.T01:CDS 60.0%
ACGCGCTGTCACACGTGCTG+GGG + Chr5:88644819-88644838 MsG0580028916.01.T01:CDS 65.0%
AGGCACAGTCCGGCATAGCG+AGG - Chr5:88644789-88644808 None:intergenic 65.0%
ATGTGTCGCGACTCGTGCGG+AGG + Chr5:88644844-88644863 MsG0580028916.01.T01:CDS 65.0%
CACGCGCTGTCACACGTGCT+GGG + Chr5:88644818-88644837 MsG0580028916.01.T01:CDS 65.0%
GCGGGCTTGTGGGCTTAGGT+GGG + Chr5:88645010-88645029 MsG0580028916.01.T01:CDS 65.0%
TGTGACAGCGCGTGCGACAC+AGG - Chr5:88644812-88644831 None:intergenic 65.0%
! GCGACACAGGAGGCACAGTC+CGG - Chr5:88644799-88644818 None:intergenic 65.0%
! GGTGGTTCGGGTACGGTACG+TGG + Chr5:88645045-88645064 MsG0580028916.01.T01:CDS 65.0%
!! CTTGGCGGGCTTGTGGGCTT+AGG + Chr5:88645006-88645025 MsG0580028916.01.T01:CDS 65.0%
!! GCTGTGCTTGGCGGGCTTGT+GGG + Chr5:88645000-88645019 MsG0580028916.01.T01:CDS 65.0%
!! TGCTGTGCTTGGCGGGCTTG+TGG + Chr5:88644999-88645018 MsG0580028916.01.T01:CDS 65.0%
CCGGCATAGCGAGGTCGCCA+CGG - Chr5:88644780-88644799 None:intergenic 70.0%
CCGTGGCGACCTCGCTATGC+CGG + Chr5:88644777-88644796 MsG0580028916.01.T01:CDS 70.0%
GACAGCGCGTGCGACACAGG+AGG - Chr5:88644809-88644828 None:intergenic 70.0%
GCACGCGCTGTCACACGTGC+TGG + Chr5:88644817-88644836 MsG0580028916.01.T01:CDS 70.0%
TCGCGACTCGTGCGGAGGCA+CGG + Chr5:88644849-88644868 MsG0580028916.01.T01:CDS 70.0%
! GGAGGCACGGTCCAGCTCGA+CGG + Chr5:88644862-88644881 MsG0580028916.01.T01:CDS 70.0%
! GGCGGGCTTGTGGGCTTAGG+TGG + Chr5:88645009-88645028 MsG0580028916.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 88644385 88651499 88644385 ID=MsG0580028916.01;Name=MsG0580028916.01
Chr5 mRNA 88644385 88651499 88644385 ID=MsG0580028916.01.T01;Parent=MsG0580028916.01;Name=MsG0580028916.01.T01;_AED=0.36;_eAED=0.36;_QI=141|0.5|1|1|1|1|3|145|371
Chr5 exon 88644385 88645240 88644385 ID=MsG0580028916.01.T01:exon:48784;Parent=MsG0580028916.01.T01
Chr5 exon 88646002 88646115 88646002 ID=MsG0580028916.01.T01:exon:48785;Parent=MsG0580028916.01.T01
Chr5 exon 88651068 88651499 88651068 ID=MsG0580028916.01.T01:exon:48786;Parent=MsG0580028916.01.T01
Chr5 five_prime_UTR 88644385 88644525 88644385 ID=MsG0580028916.01.T01:five_prime_utr;Parent=MsG0580028916.01.T01
Chr5 CDS 88644526 88645240 88644526 ID=MsG0580028916.01.T01:cds;Parent=MsG0580028916.01.T01
Chr5 CDS 88646002 88646115 88646002 ID=MsG0580028916.01.T01:cds;Parent=MsG0580028916.01.T01
Chr5 CDS 88651068 88651354 88651068 ID=MsG0580028916.01.T01:cds;Parent=MsG0580028916.01.T01
Chr5 three_prime_UTR 88651355 88651499 88651355 ID=MsG0580028916.01.T01:three_prime_utr;Parent=MsG0580028916.01.T01
Gene Sequence

>MsG0580028916.01.T01

ATGGTGAGATTCTTCAAAATTATCTTTCTTTTTTCTACCACCCTTTTTCTTTCTTTATCAGAATCATCAACCACAAACCTCTACCTATACGGTGGTTGCACACAACAAATGTACACACCAAACTCACCCTACGAGTCAAACCTCAATTCACTCCTCACCTCACTAGTCAACTCAGCAACATACTCATCCTACAACAACTTCACCGTCCTAGGGTCCACCCAACAAGACATAATCTATGGCCTATATCAATGCCGTGGCGACCTCGCTATGCCGGACTGTGCCTCCTGTGTCGCACGCGCTGTCACACGTGCTGGGGACATGTGTCGCGACTCGTGCGGAGGCACGGTCCAGCTCGACGGTTGTTTGGTGAAGTATGACAATGCTACTTTTCTAGGAGTGGAGGATAAGAATGTTTTGTTGAAAAAGTGTGGGCCTTCCGTGGGCTATAATCCAGAAGCCATGGGCTCAAGAGATGCTGTGCTTGGCGGGCTTGTGGGCTTAGGTGGGCCTTTTAGGGTTGGTGGTTCGGGTACGGTACGTGGTGTTGCCCAGTGTACTGGGGATCTTAGTTTTGGGGAGTGTCAAGATTGTGTTGTAGAAGCGATCGGACGGTTGAAAAGTGATTGTGGTACTGCAGATTATGGAGATTTGTTCTTGGGTAAATGTTATGCAAGATATTCTACCGGTGGGGCCCATGATACGTCTAAGGCCCATGGAAAATTGGGTATAGTAGGTGAAAAGAGATTTGCATTAATCATTGGTTTATTAGCAGGAGCAGCCATACTTGTTATTCTCATTGCTTTCTTGAGCAAGATTTGTAGGAGACAGGGATTCAACAAAGATGAGATAAAAGTACAAATTGAGGAAGGGAACATTTTGCACGTGAGAGGAGAAGGTGTGAAAGAGGAGAATTTGGGAAAGGACGTTGTTTGGCATGTAGCTGAGAGAGGAACTGGAAAAGGAGATTTTTCAAGGATGATTGAATTGCCTGAGAATGTGAAATTGGATCAGATTAAGGCACATGTGGAAAATGGAGTTCTCACTGTTCTTGTACCTAAAGATGCATCACCTAAATCGCATAAAGTTCGAAACATTAACATCACTAGTAAACTTTAA
Protein sequence

>MsG0580028916.01.T01

MVRFFKIIFLFSTTLFLSLSESSTTNLYLYGGCTQQMYTPNSPYESNLNSLLTSLVNSATYSSYNNFTVLGSTQQDIIYGLYQCRGDLAMPDCASCVARAVTRAGDMCRDSCGGTVQLDGCLVKYDNATFLGVEDKNVLLKKCGPSVGYNPEAMGSRDAVLGGLVGLGGPFRVGGSGTVRGVAQCTGDLSFGECQDCVVEAIGRLKSDCGTADYGDLFLGKCYARYSTGGAHDTSKAHGKLGIVGEKRFALIIGLLAGAAILVILIAFLSKICRRQGFNKDEIKVQIEEGNILHVRGEGVKEENLGKDVVWHVAERGTGKGDFSRMIELPENVKLDQIKAHVENGVLTVLVPKDASPKSHKVRNINITSKL*