AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021266.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021266.01.T01 MTR_4g070420 93.258 712 40 2 1 708 2 709 0.0 1331
MsG0480021266.01.T01 MTR_4g070420 91.558 462 31 2 1 458 2 459 0.0 860
MsG0480021266.01.T01 MTR_4g070420 91.630 454 30 2 1 450 2 451 0.0 854
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021266.01.T01 AT2G16365 30.412 388 187 15 336 708 135 454 1.77e-25 110
MsG0480021266.01.T01 AT2G16365 30.412 388 187 15 336 708 135 454 1.77e-25 110
MsG0480021266.01.T01 AT2G16365 30.412 388 187 15 336 708 135 454 1.77e-25 110
MsG0480021266.01.T01 AT2G16365 30.412 388 187 15 336 708 135 454 3.88e-25 111
MsG0480021266.01.T01 AT2G16365 30.412 388 187 15 336 708 135 454 6.41e-25 111
MsG0480021266.01.T01 AT2G16365 30.412 388 187 15 336 708 135 454 6.41e-25 111

Find 173 sgRNAs with CRISPR-Local

Find 253 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACTTTATCTCCTCAAATT+TGG 0.125126 4:+56088866 MsG0480021266.01.T01:three_prime_UTR
CACGAGGGAGATGGAAAATT+TGG 0.137814 4:+56086302 MsG0480021266.01.T01:CDS
GAAATTATTTCCTTTAATTT+TGG 0.188462 4:-56087053 None:intergenic
TCCATCTGAGCTTACGAAAA+AGG 0.210390 4:+56088643 MsG0480021266.01.T01:CDS
TACAAACCAGACTGCATTCT+TGG 0.228523 4:+56086856 MsG0480021266.01.T01:CDS
TCGTCGTTTGATAATACTTT+TGG 0.242119 4:-56088398 None:intergenic
CATTGGTGATATGAAGTTTA+TGG 0.261268 4:+56088711 MsG0480021266.01.T01:three_prime_UTR
TGGAATCATTGAACCTATTA+TGG 0.292170 4:+56089035 MsG0480021266.01.T01:three_prime_UTR
TCATCATCATTACCAGCTAT+TGG 0.294330 4:-56086770 None:intergenic
ATGTAAAGTTATGATCCTTT+TGG 0.299353 4:+56089129 MsG0480021266.01.T01:three_prime_UTR
ATGGCACCTACCAAAATTAA+AGG 0.311974 4:+56087043 MsG0480021266.01.T01:CDS
AAAATCTGGCAGTAGCTCTT+TGG 0.312890 4:+56088172 MsG0480021266.01.T01:CDS
ATTCTTCTGCTGAATCTATA+CGG 0.313873 4:-56086964 None:intergenic
CGAGGACCACGTTCTGCTTA+TGG 0.314497 4:+56086917 MsG0480021266.01.T01:CDS
AGTTAATTGTAAGGTTTGAT+AGG 0.318044 4:+56089100 MsG0480021266.01.T01:three_prime_UTR
AAGCTACTCATCTGCTTCTC+AGG 0.329459 4:-56086680 None:intergenic
CACTACCAGATATAAATAAA+AGG 0.339310 4:+56088033 MsG0480021266.01.T01:CDS
TTGAAAGAGCCAAGTTCTTC+AGG 0.340528 4:-56086487 None:intergenic
ATGTGTTGTCTGGGAAATAT+TGG 0.350543 4:-56087002 None:intergenic
TTCAGCGTGATATACGGTTT+TGG 0.353327 4:-56088351 None:intergenic
AAGTTTATGGTGGGGATTCA+TGG 0.360414 4:+56088724 MsG0480021266.01.T01:three_prime_UTR
CGTTTAACCCATCTGCTACT+TGG 0.365771 4:-56088203 None:intergenic
TTCAGAGATGGAGTCATAAT+CGG 0.369850 4:+56088477 MsG0480021266.01.T01:CDS
TAAATGCTGCTCTACTCATT+TGG 0.371495 4:-56088900 None:intergenic
TCAAGGGTCCAAGTGGGATA+TGG 0.372160 4:-56088822 None:intergenic
AGTTCCATTGCTATCTAATA+AGG 0.373600 4:+56087523 MsG0480021266.01.T01:CDS
TTTGGAAAAGAATCAAGCTT+TGG 0.378518 4:+56086320 MsG0480021266.01.T01:CDS
TTACATGAGAATAATCTTGC+AGG 0.380305 4:+56087259 MsG0480021266.01.T01:CDS
AATTCATTGCCTTTCCCATC+AGG 0.381879 4:-56088613 None:intergenic
ATATTACACTTTCACATCCT+TGG 0.382045 4:+56088453 MsG0480021266.01.T01:CDS
GACTCGAGCAGCACCATAAT+AGG 0.385330 4:-56089048 None:intergenic
TATTCCTTCAGCGTGATATA+CGG 0.387189 4:-56088357 None:intergenic
TAAATTGTCTTAATCCTAGA+TGG 0.387977 4:+56088991 MsG0480021266.01.T01:three_prime_UTR
ATCTCCTGAACCCGACACTA+TGG 0.392216 4:+56087225 MsG0480021266.01.T01:CDS
AAATCTGGCAGTAGCTCTTT+GGG 0.392253 4:+56088173 MsG0480021266.01.T01:CDS
ATGTCCATAGTGTCGGGTTC+AGG 0.392369 4:-56087229 None:intergenic
TAATGCCTGCGTAATGCTCT+TGG 0.394984 4:-56086628 None:intergenic
CTCCCTAGAGTTTCCAGCTT+CGG 0.408155 4:-56087133 None:intergenic
GAAAGAGAGCAAATCCAGTA+TGG 0.411074 4:+56088325 MsG0480021266.01.T01:CDS
GCAGCTTGTGAAGATGTTAA+TGG 0.412528 4:-56086386 None:intergenic
AAAAGGGTCCTGTGATGGTT+TGG 0.417387 4:+56088660 MsG0480021266.01.T01:CDS
TAAAGAACTGATGTGTTGTC+TGG 0.422371 4:-56087012 None:intergenic
GGTACCAAGAGTGAAAATAT+TGG 0.428448 4:+56088257 MsG0480021266.01.T01:CDS
GTTTCCAAGCATTGCTGCCA+TGG 0.431782 4:+56088589 MsG0480021266.01.T01:CDS
ACTTTGTATGGGAAGTTACT+TGG 0.433712 4:+56088779 MsG0480021266.01.T01:three_prime_UTR
TGGCAAGTCCCATGGTTGAC+AGG 0.434405 4:+56088075 MsG0480021266.01.T01:CDS
GACTCATTCGCAGGGCTTGT+CGG 0.436130 4:-56087202 None:intergenic
TTGTATTCACTGACTTCTCC+AGG 0.445070 4:-56088010 None:intergenic
TTCCTTCGCTTCAGTAAAAG+AGG 0.446015 4:-56088423 None:intergenic
GTATGGCTGCATACTTTGTA+TGG 0.447068 4:+56088767 MsG0480021266.01.T01:three_prime_UTR
GCAGTCTGGTTTGTAATGTC+TGG 0.451647 4:-56086848 None:intergenic
TTGGTGAATTGAGTACTGCC+TGG 0.451997 4:+56088798 MsG0480021266.01.T01:three_prime_UTR
CATGTTGATGAGGAGGAGAT+TGG 0.457977 4:+56086173 MsG0480021266.01.T01:CDS
TATTAACAGAGTTAATTGTA+AGG 0.462815 4:+56089091 MsG0480021266.01.T01:three_prime_UTR
TACTGTGGAATGTCCGAAGC+TGG 0.463281 4:+56087120 MsG0480021266.01.T01:CDS
TGTGTTGTCTGGGAAATATT+GGG 0.465382 4:-56087001 None:intergenic
AACAAATTCAAGGGTCCAAG+TGG 0.471369 4:-56088829 None:intergenic
CTGTTAATATATGCTTAGCT+TGG 0.476297 4:-56089077 None:intergenic
AATGCCTGCGTAATGCTCTT+GGG 0.476723 4:-56086627 None:intergenic
TCAGTTCTTTAGCGAATCAA+TGG 0.481154 4:+56087024 MsG0480021266.01.T01:CDS
TGCCTTTCCCATCAGGGCCA+TGG 0.481687 4:-56088606 None:intergenic
AGTTTATGGTGGGGATTCAT+GGG 0.481785 4:+56088725 MsG0480021266.01.T01:three_prime_UTR
TGTCACCATGGATGGCTCAT+TGG 0.483430 4:+56086012 MsG0480021266.01.T01:CDS
CACATCCTTGGATTCAGAGA+TGG 0.486570 4:+56088465 MsG0480021266.01.T01:CDS
CAAAACACTGGTTTGAGTGT+TGG 0.489255 4:+56086062 MsG0480021266.01.T01:CDS
GGACATGCAAGGTCAAAATC+TGG 0.489568 4:+56088158 MsG0480021266.01.T01:CDS
CATTGCTGCCATGGCCCTGA+TGG 0.489579 4:+56088598 MsG0480021266.01.T01:CDS
CAAGCTAAACAACAAATTCA+AGG 0.494005 4:-56088839 None:intergenic
AGGGCCATGGCAGCAATGCT+TGG 0.495199 4:-56088593 None:intergenic
TGTCCGAAGCTGGAAACTCT+AGG 0.496175 4:+56087130 MsG0480021266.01.T01:CDS
TCGGACATAGTGCCTACAAA+TGG 0.498141 4:+56086542 MsG0480021266.01.T01:CDS
TGCTGCTGACCTGAAGAACT+TGG 0.504230 4:+56086478 MsG0480021266.01.T01:CDS
GGAAAAGAATCAAGCTTTGG+AGG 0.505853 4:+56086323 MsG0480021266.01.T01:CDS
GCCTCATGAGCTTCTCACTC+TGG 0.509485 4:+56088055 MsG0480021266.01.T01:CDS
GTCCAAGTGGGATATGGCCC+AGG 0.509913 4:-56088816 None:intergenic
TTGACTCCAAGAATGCAGTC+TGG 0.511680 4:-56086862 None:intergenic
TAGTTACTTGTCACCATGGA+TGG 0.515835 4:+56086004 MsG0480021266.01.T01:CDS
GTTGAGAAGCGTGATTTACT+TGG 0.519899 4:+56086119 MsG0480021266.01.T01:CDS
TGCCTGGGCCATATCCCACT+TGG 0.520800 4:+56088814 MsG0480021266.01.T01:three_prime_UTR
TTCCCGCATAATCCAATAGC+TGG 0.522707 4:+56086758 MsG0480021266.01.T01:CDS
TCAGGAGATGACTCATTCGC+AGG 0.522818 4:-56087211 None:intergenic
AACGTCATTGCGGAACAACT+TGG 0.522885 4:+56086508 MsG0480021266.01.T01:CDS
ACATTACGGTGTAAGCTCTT+CGG 0.529472 4:+56086892 MsG0480021266.01.T01:CDS
TTCTTCTGCTGAATCTATAC+GGG 0.530303 4:-56086963 None:intergenic
TTCGTATTCCAAACCATCAC+AGG 0.531285 4:-56088668 None:intergenic
GAGTCAACTAAACCACATTA+CGG 0.531761 4:+56086878 MsG0480021266.01.T01:CDS
AGTATCAATGTCCATAGTGT+CGG 0.532435 4:-56087236 None:intergenic
TTACTTGGTGGGTCGGACGT+TGG 0.535071 4:+56086134 MsG0480021266.01.T01:CDS
AGAAAATTTCTGAAGAGGCA+TGG 0.535376 4:+56089015 MsG0480021266.01.T01:three_prime_UTR
TCTCACTCTGGCAAGTCCCA+TGG 0.538395 4:+56088067 MsG0480021266.01.T01:CDS
GTACGAGCAGCAATCTCATC+CGG 0.538770 4:-56085939 None:intergenic
AAGTTATGCACGTTCGACTC+TGG 0.538924 4:+56088230 MsG0480021266.01.T01:CDS
TCAGAGATGGAGTCATAATC+GGG 0.539217 4:+56088478 MsG0480021266.01.T01:CDS
CCAAATTTGAGGAGATAAAG+TGG 0.542699 4:-56088866 None:intergenic
GTATCAATGTCCATAGTGTC+GGG 0.544287 4:-56087235 None:intergenic
CAACTTGGTAAACTCAGCTT+CGG 0.546071 4:+56086523 MsG0480021266.01.T01:CDS
TACCAGCTATTGGATTATGC+GGG 0.549442 4:-56086760 None:intergenic
TTCTTCTCTTCTCTCTGCAA+AGG 0.552529 4:-56086272 None:intergenic
TGCACGTTCGACTCTGGTCA+TGG 0.552727 4:+56088236 MsG0480021266.01.T01:CDS
ATTCATTGCCTTTCCCATCA+GGG 0.553766 4:-56088612 None:intergenic
ATGGAAGAAAATTTCTGAAG+AGG 0.558812 4:+56089010 MsG0480021266.01.T01:three_prime_UTR
TCTGTGATGCCTCAACTCAC+AGG 0.560895 4:+56086581 MsG0480021266.01.T01:CDS
CTACCGTGATGGCGAGAGAG+TGG 0.561113 4:+56085962 MsG0480021266.01.T01:CDS
CAAAACTCGCTCTCAACTCA+AGG 0.561994 4:+56087960 MsG0480021266.01.T01:CDS
TGGTTTGAGTGTTGGTTGTG+AGG 0.562819 4:+56086070 MsG0480021266.01.T01:CDS
ATTACCTTATTAGATAGCAA+TGG 0.564874 4:-56087527 None:intergenic
GGCAAGTCCCATGGTTGACA+GGG 0.566145 4:+56088076 MsG0480021266.01.T01:CDS
GAGAAGCGTGATTTACTTGG+TGG 0.567599 4:+56086122 MsG0480021266.01.T01:CDS
AGAAGCGTGATTTACTTGGT+GGG 0.568090 4:+56086123 MsG0480021266.01.T01:CDS
TCCCGTTCAAAATTGTTGCA+AGG 0.569144 4:+56086722 MsG0480021266.01.T01:CDS
TGACTCCATCTCTGAATCCA+AGG 0.570038 4:-56088470 None:intergenic
TTCAATGCATGTTGATGAGG+AGG 0.570083 4:+56086166 MsG0480021266.01.T01:CDS
TAATTTGTGAGGAATCTGTA+TGG 0.570472 4:+56088750 MsG0480021266.01.T01:three_prime_UTR
TTACCAGCTATTGGATTATG+CGG 0.571389 4:-56086761 None:intergenic
TGCCATGGCCCTGATGGGAA+AGG 0.574061 4:+56088604 MsG0480021266.01.T01:CDS
ACGTTCTGCTTATGGTGTGA+AGG 0.574123 4:+56086925 MsG0480021266.01.T01:CDS
CTCGATCCACCTGTGAGTTG+AGG 0.574532 4:-56086590 None:intergenic
CTAGTCTCCCTGTCAACCAT+GGG 0.575414 4:-56088083 None:intergenic
CGGTCACTAGCGGGTGGAGT+CGG 0.577522 4:-56087097 None:intergenic
GATCAGATCCAAGTAGCAGA+TGG 0.578350 4:+56088195 MsG0480021266.01.T01:CDS
CTTCAGGTCAGCAGCACACA+AGG 0.579062 4:-56086471 None:intergenic
GCCAGAGTGAGAAGCTCATG+AGG 0.579520 4:-56088056 None:intergenic
TAGTTCAATGCATGTTGATG+AGG 0.582033 4:+56086163 MsG0480021266.01.T01:CDS
AGCTACTCATCTGCTTCTCA+GGG 0.583089 4:-56086679 None:intergenic
GCGTGATTTACTTGGTGGGT+CGG 0.583135 4:+56086127 MsG0480021266.01.T01:CDS
GTCCGAAGCTGGAAACTCTA+GGG 0.584314 4:+56087131 MsG0480021266.01.T01:CDS
GTTATTGTCTCAAGGAGTGC+CGG 0.586151 4:+56086442 MsG0480021266.01.T01:CDS
GAAGAGCTTACACCGTAATG+TGG 0.586677 4:-56086890 None:intergenic
TCCACAGTACGGTCACTAGC+GGG 0.587185 4:-56087106 None:intergenic
ATAGCTGGTAATGATGATGA+TGG 0.589965 4:+56086773 MsG0480021266.01.T01:CDS
GAGTGTCGGTTATTGTCTCA+AGG 0.591827 4:+56086434 MsG0480021266.01.T01:CDS
ACGTGATATAAGAAATGACT+TGG 0.591964 4:-56086222 None:intergenic
CAGGAGATGACTCATTCGCA+GGG 0.592173 4:-56087210 None:intergenic
GTTATAGTTACTTGTCACCA+TGG 0.597366 4:+56086000 MsG0480021266.01.T01:CDS
GCAGCACACAAGGATTTCAC+CGG 0.598220 4:-56086461 None:intergenic
TATGGCTGCATACTTTGTAT+GGG 0.598612 4:+56088768 MsG0480021266.01.T01:three_prime_UTR
TGGTGAATTGAGTACTGCCT+GGG 0.599054 4:+56088799 MsG0480021266.01.T01:three_prime_UTR
GCTGCTCGTACCTACCGTGA+TGG 0.601902 4:+56085951 MsG0480021266.01.T01:CDS
AAAGAACTGATGTGTTGTCT+GGG 0.603862 4:-56087011 None:intergenic
ACTAGTCTCCCTGTCAACCA+TGG 0.606962 4:-56088084 None:intergenic
GGTGTAAGCTCTTCGGCGCG+AGG 0.607249 4:+56086899 MsG0480021266.01.T01:CDS
TGCTTCCAATGAGCCATCCA+TGG 0.607803 4:-56086017 None:intergenic
ATTCATGGGATTAATTTGTG+AGG 0.608233 4:+56088739 MsG0480021266.01.T01:three_prime_UTR
ATTGCTGCCATGGCCCTGAT+GGG 0.609352 4:+56088599 MsG0480021266.01.T01:CDS
GGTGCAACAATTTCAGCTAG+AGG 0.609715 4:+56087981 MsG0480021266.01.T01:CDS
TTGTCGGACATTTCAAATCG+TGG 0.609831 4:-56087186 None:intergenic
ATCAGATCCAAGTAGCAGAT+GGG 0.612774 4:+56088196 MsG0480021266.01.T01:CDS
CATCCACTCTCTCGCCATCA+CGG 0.613842 4:-56085965 None:intergenic
CACTCTCTCGCCATCACGGT+AGG 0.613866 4:-56085961 None:intergenic
TGGCTCTTTCAACGTCATTG+CGG 0.616065 4:+56086498 MsG0480021266.01.T01:CDS
CGTTCTGCTTATGGTGTGAA+GGG 0.616183 4:+56086926 MsG0480021266.01.T01:CDS
AAGCTAAACAACAAATTCAA+GGG 0.616991 4:-56088838 None:intergenic
ACCCGCTAGTGACCGTACTG+TGG 0.619376 4:+56087105 MsG0480021266.01.T01:CDS
AAGCCAACAAAACAAAACAC+TGG 0.620362 4:+56086050 MsG0480021266.01.T01:CDS
AAACTTCGATAAAAGAGTGT+CGG 0.622925 4:+56086420 MsG0480021266.01.T01:CDS
TTCCACAGTACGGTCACTAG+CGG 0.627753 4:-56087107 None:intergenic
GCTTCGGACATTCCACAGTA+CGG 0.632713 4:-56087117 None:intergenic
GTGATGCCTCAACTCACAGG+TGG 0.632905 4:+56086584 MsG0480021266.01.T01:CDS
CATAAACTTCATATCACCAA+TGG 0.633280 4:-56088710 None:intergenic
GGTGATATGAAGTTTATGGT+GGG 0.641580 4:+56088715 MsG0480021266.01.T01:three_prime_UTR
TGGTGATATGAAGTTTATGG+TGG 0.642736 4:+56088714 MsG0480021266.01.T01:three_prime_UTR
CTTGCATGTCCGTTTACGTG+AGG 0.645651 4:-56088146 None:intergenic
CTCACGTAAACGGACATGCA+AGG 0.651317 4:+56088147 MsG0480021266.01.T01:CDS
TCATCTGCTTCTCAGGGACA+CGG 0.651975 4:-56086673 None:intergenic
GCATCCCAAGAGCATTACGC+AGG 0.655452 4:+56086623 MsG0480021266.01.T01:CDS
AGAGTGGATGCTGCAATGCA+TGG 0.659923 4:+56085978 MsG0480021266.01.T01:CDS
ATTGGATTATGCGGGAAACG+AGG 0.661816 4:-56086752 None:intergenic
AAAACCGTATATCACGCTGA+AGG 0.664297 4:+56088353 MsG0480021266.01.T01:CDS
ACAGTACGGTCACTAGCGGG+TGG 0.674398 4:-56087103 None:intergenic
ACAAATTCAAGGGTCCAAGT+GGG 0.686786 4:-56088828 None:intergenic
GTGATATGAAGTTTATGGTG+GGG 0.691259 4:+56088716 MsG0480021266.01.T01:three_prime_UTR
TTCACACCATAAGCAGAACG+TGG 0.741114 4:-56086923 None:intergenic
TCAGCAGAAGAATTATCACG+AGG 0.776016 4:+56086974 MsG0480021266.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAACTTAACTGAAATTA+TGG - Chr4:56087401-56087420 None:intergenic 15.0%
!!! AATAGTATTGGATTTAATAT+GGG - Chr4:56087873-56087892 None:intergenic 15.0%
!!! ATATGATTTTCATTATTATC+TGG + Chr4:56087618-56087637 MsG0480021266.01.T01:intron 15.0%
!!! ATGATGTTAATTTTGTTTTT+TGG + Chr4:56087465-56087484 MsG0480021266.01.T01:intron 15.0%
!!! GAAATTATTTCCTTTAATTT+TGG - Chr4:56087056-56087075 None:intergenic 15.0%
!! ACACTTTATATATCATAATC+TGG + Chr4:56087647-56087666 MsG0480021266.01.T01:intron 20.0%
!! TATTAACAGAGTTAATTGTA+AGG + Chr4:56089091-56089110 MsG0480021266.01.T01:three_prime_UTR 20.0%
!!! ATAGTATTGGATTTAATATG+GGG - Chr4:56087872-56087891 None:intergenic 20.0%
!!! ATATATCATAATCTGGTTTT+TGG + Chr4:56087654-56087673 MsG0480021266.01.T01:intron 20.0%
!!! CAATTAAATTTTGAATCTTG+TGG - Chr4:56086823-56086842 None:intergenic 20.0%
!!! GAATAGTATTGGATTTAATA+TGG - Chr4:56087874-56087893 None:intergenic 20.0%
!!! TATATCATAATCTGGTTTTT+GGG + Chr4:56087655-56087674 MsG0480021266.01.T01:intron 20.0%
!!! TTAATCGTAGTTTTATTGTT+TGG + Chr4:56087416-56087435 MsG0480021266.01.T01:intron 20.0%
!!! TTATTTCCTTTAATTTTGGT+AGG - Chr4:56087052-56087071 None:intergenic 20.0%
!!! TTTATCGAAGTTTCTATTTT+AGG - Chr4:56086413-56086432 None:intergenic 20.0%
! AAGCTAAACAACAAATTCAA+GGG - Chr4:56088841-56088860 None:intergenic 25.0%
! AGTTAATTGTAAGGTTTGAT+AGG + Chr4:56089100-56089119 MsG0480021266.01.T01:three_prime_UTR 25.0%
! ATACTATTCTAAACTTTGAG+CGG + Chr4:56087885-56087904 MsG0480021266.01.T01:intron 25.0%
! ATTACCTTATTAGATAGCAA+TGG - Chr4:56087530-56087549 None:intergenic 25.0%
! ATTGTTTGGAAAATGACATA+TGG + Chr4:56087430-56087449 MsG0480021266.01.T01:intron 25.0%
! CACTACCAGATATAAATAAA+AGG + Chr4:56088033-56088052 MsG0480021266.01.T01:CDS 25.0%
! TAAATTGTCTTAATCCTAGA+TGG + Chr4:56088991-56089010 MsG0480021266.01.T01:three_prime_UTR 25.0%
!! ATGTAAAGTTATGATCCTTT+TGG + Chr4:56089129-56089148 MsG0480021266.01.T01:three_prime_UTR 25.0%
!! CTCAAAGTTTAGAATAGTAT+TGG - Chr4:56087885-56087904 None:intergenic 25.0%
!! TGTAAAGTTATGATCCTTTT+GGG + Chr4:56089130-56089149 MsG0480021266.01.T01:three_prime_UTR 25.0%
!!! ATTTTGTTTTTTGGAACTGA+TGG + Chr4:56087474-56087493 MsG0480021266.01.T01:intron 25.0%
!!! GATAATGTTTTTATCAACAG+AGG + Chr4:56086347-56086366 MsG0480021266.01.T01:CDS 25.0%
!!! GCTTTAAGGATATCATTATA+TGG - Chr4:56087312-56087331 None:intergenic 25.0%
!!! TTTGTTGATTTTACATGTGA+AGG - Chr4:56088287-56088306 None:intergenic 25.0%
ACGTGATATAAGAAATGACT+TGG - Chr4:56086225-56086244 None:intergenic 30.0%
AGTTCCATTGCTATCTAATA+AGG + Chr4:56087523-56087542 MsG0480021266.01.T01:CDS 30.0%
ATATTACACTTTCACATCCT+TGG + Chr4:56088453-56088472 MsG0480021266.01.T01:CDS 30.0%
ATGCTATATGCAAAAAAAGC+AGG - Chr4:56088953-56088972 None:intergenic 30.0%
ATTCTTCTGCTGAATCTATA+CGG - Chr4:56086967-56086986 None:intergenic 30.0%
CAACACTCATCATAATTAAC+AGG - Chr4:56087711-56087730 None:intergenic 30.0%
CAAGCTAAACAACAAATTCA+AGG - Chr4:56088842-56088861 None:intergenic 30.0%
CATAAACTTCATATCACCAA+TGG - Chr4:56088713-56088732 None:intergenic 30.0%
CGTCTTTCTCAAAACAAAAA+TGG + Chr4:56086242-56086261 MsG0480021266.01.T01:CDS 30.0%
CTGTTAATATATGCTTAGCT+TGG - Chr4:56089080-56089099 None:intergenic 30.0%
GAAAAAGTTGTTCAACATCA+AGG - Chr4:56088127-56088146 None:intergenic 30.0%
GTATATATGCACAAAGTGAA+AGG + Chr4:56087281-56087300 MsG0480021266.01.T01:intron 30.0%
TCATATGAATGCTTAAGCAA+TGG - Chr4:56087604-56087623 None:intergenic 30.0%
TGGAATCATTGAACCTATTA+TGG + Chr4:56089035-56089054 MsG0480021266.01.T01:three_prime_UTR 30.0%
TTACATGAGAATAATCTTGC+AGG + Chr4:56087259-56087278 MsG0480021266.01.T01:CDS 30.0%
TTCTATATTGCAGAGCTTTA+AGG - Chr4:56087326-56087345 None:intergenic 30.0%
TTTGGAAAAGAATCAAGCTT+TGG + Chr4:56086320-56086339 MsG0480021266.01.T01:CDS 30.0%
! AAACTTCGATAAAAGAGTGT+CGG + Chr4:56086420-56086439 MsG0480021266.01.T01:CDS 30.0%
! AAGGTAATTTTGCTCATGTT+TGG + Chr4:56087542-56087561 MsG0480021266.01.T01:intron 30.0%
! ATGGAAGAAAATTTCTGAAG+AGG + Chr4:56089010-56089029 MsG0480021266.01.T01:three_prime_UTR 30.0%
! CATTGGTGATATGAAGTTTA+TGG + Chr4:56088711-56088730 MsG0480021266.01.T01:three_prime_UTR 30.0%
! GTAAAGTTATGATCCTTTTG+GGG + Chr4:56089131-56089150 MsG0480021266.01.T01:three_prime_UTR 30.0%
! TAATTTGTGAGGAATCTGTA+TGG + Chr4:56088750-56088769 MsG0480021266.01.T01:three_prime_UTR 30.0%
! TCAGAAATTTTCTTCCATCT+AGG - Chr4:56089008-56089027 None:intergenic 30.0%
! TTCTCCAATATTTTCACTCT+TGG - Chr4:56088264-56088283 None:intergenic 30.0%
! TTTTGATCGATCCAAATTTG+AGG - Chr4:56088880-56088899 None:intergenic 30.0%
!! AATGTTTTTATCAACAGAGG+TGG + Chr4:56086350-56086369 MsG0480021266.01.T01:CDS 30.0%
!! ACTGATTCATGCATCTTTTT+GGG - Chr4:56088512-56088531 None:intergenic 30.0%
!! ATGTTTTTATCAACAGAGGT+GGG + Chr4:56086351-56086370 MsG0480021266.01.T01:CDS 30.0%
!! ATTCATGGGATTAATTTGTG+AGG + Chr4:56088739-56088758 MsG0480021266.01.T01:three_prime_UTR 30.0%
!! CGTCGTTTGATAATACTTTT+GGG - Chr4:56088400-56088419 None:intergenic 30.0%
!! GTCGTTTGATAATACTTTTG+GGG - Chr4:56088399-56088418 None:intergenic 30.0%
!! TCGTCGTTTGATAATACTTT+TGG - Chr4:56088401-56088420 None:intergenic 30.0%
!! TCGTTTGATAATACTTTTGG+GGG - Chr4:56088398-56088417 None:intergenic 30.0%
!! TGAGGCCTTTTATTTATATC+TGG - Chr4:56088041-56088060 None:intergenic 30.0%
!!! AAACCAGTGTTTTGTTTTGT+TGG - Chr4:56086056-56086075 None:intergenic 30.0%
AAAGAACTGATGTGTTGTCT+GGG - Chr4:56087014-56087033 None:intergenic 35.0%
AAGCCAACAAAACAAAACAC+TGG + Chr4:56086050-56086069 MsG0480021266.01.T01:CDS 35.0%
AATATGGGGTGATATGATAG+TGG - Chr4:56087858-56087877 None:intergenic 35.0%
ACTTTGTATGGGAAGTTACT+TGG + Chr4:56088779-56088798 MsG0480021266.01.T01:three_prime_UTR 35.0%
AGGGTGGAAAATTAAATGCA+TGG - Chr4:56087579-56087598 None:intergenic 35.0%
AGTATCAATGTCCATAGTGT+CGG - Chr4:56087239-56087258 None:intergenic 35.0%
ATAGAAAAATCCACCCCAAA+AGG - Chr4:56089147-56089166 None:intergenic 35.0%
ATGGCACCTACCAAAATTAA+AGG + Chr4:56087043-56087062 MsG0480021266.01.T01:CDS 35.0%
ATGTGTTGTCTGGGAAATAT+TGG - Chr4:56087005-56087024 None:intergenic 35.0%
CAAAAAGATGCATGAATCAG+TGG + Chr4:56088511-56088530 MsG0480021266.01.T01:CDS 35.0%
CCAAATTTGAGGAGATAAAG+TGG - Chr4:56088869-56088888 None:intergenic 35.0%
CCACTTTATCTCCTCAAATT+TGG + Chr4:56088866-56088885 MsG0480021266.01.T01:three_prime_UTR 35.0%
GAGTCAACTAAACCACATTA+CGG + Chr4:56086878-56086897 MsG0480021266.01.T01:CDS 35.0%
GGTACCAAGAGTGAAAATAT+TGG + Chr4:56088257-56088276 MsG0480021266.01.T01:CDS 35.0%
GGTGATATGAAGTTTATGGT+GGG + Chr4:56088715-56088734 MsG0480021266.01.T01:three_prime_UTR 35.0%
GTGATATGAAGTTTATGGTG+GGG + Chr4:56088716-56088735 MsG0480021266.01.T01:three_prime_UTR 35.0%
GTTATAGTTACTTGTCACCA+TGG + Chr4:56086000-56086019 MsG0480021266.01.T01:CDS 35.0%
TAAAGAACTGATGTGTTGTC+TGG - Chr4:56087015-56087034 None:intergenic 35.0%
TAAATGCTGCTCTACTCATT+TGG - Chr4:56088903-56088922 None:intergenic 35.0%
TAGTTCAATGCATGTTGATG+AGG + Chr4:56086163-56086182 MsG0480021266.01.T01:CDS 35.0%
TATGGCTGCATACTTTGTAT+GGG + Chr4:56088768-56088787 MsG0480021266.01.T01:three_prime_UTR 35.0%
TATTCCTTCAGCGTGATATA+CGG - Chr4:56088360-56088379 None:intergenic 35.0%
TCAGTTCTTTAGCGAATCAA+TGG + Chr4:56087024-56087043 MsG0480021266.01.T01:CDS 35.0%
TCATCATCATTACCAGCTAT+TGG - Chr4:56086773-56086792 None:intergenic 35.0%
TGGTGATATGAAGTTTATGG+TGG + Chr4:56088714-56088733 MsG0480021266.01.T01:three_prime_UTR 35.0%
TGTGTTGTCTGGGAAATATT+GGG - Chr4:56087004-56087023 None:intergenic 35.0%
TTACCAGCTATTGGATTATG+CGG - Chr4:56086764-56086783 None:intergenic 35.0%
TTCAGAGATGGAGTCATAAT+CGG + Chr4:56088477-56088496 MsG0480021266.01.T01:CDS 35.0%
TTCTTCTGCTGAATCTATAC+GGG - Chr4:56086966-56086985 None:intergenic 35.0%
! AGAAAATTTCTGAAGAGGCA+TGG + Chr4:56089015-56089034 MsG0480021266.01.T01:three_prime_UTR 35.0%
! ATAGCTGGTAATGATGATGA+TGG + Chr4:56086773-56086792 MsG0480021266.01.T01:CDS 35.0%
! TGCCTTGCAACAATTTTGAA+CGG - Chr4:56086727-56086746 None:intergenic 35.0%
! TTAAATTTTGCAGTGCTCCA+AGG + Chr4:56087932-56087951 MsG0480021266.01.T01:intron 35.0%
! TTCGTTTTCTTCACTCTTTC+TGG - Chr4:56087161-56087180 None:intergenic 35.0%
!! CAACTTTTTCCTCACGTAAA+CGG + Chr4:56088137-56088156 MsG0480021266.01.T01:CDS 35.0%
!! TCTTTTTCACGTCCATTTGT+AGG - Chr4:56086557-56086576 None:intergenic 35.0%
!! TGTTTTTATCAACAGAGGTG+GGG + Chr4:56086352-56086371 MsG0480021266.01.T01:CDS 35.0%
!! TTTGATAATACTTTTGGGGG+TGG - Chr4:56088395-56088414 None:intergenic 35.0%
!!! ACTTTGAAGTTTTTGGCCAT+TGG + Chr4:56088694-56088713 MsG0480021266.01.T01:exon 35.0%
!!! CACTGATTCATGCATCTTTT+TGG - Chr4:56088513-56088532 None:intergenic 35.0%
!!! CGAAGAGACTTTGAAGTTTT+TGG + Chr4:56088687-56088706 MsG0480021266.01.T01:exon 35.0%
AAAACCGTATATCACGCTGA+AGG + Chr4:56088353-56088372 MsG0480021266.01.T01:CDS 40.0%
AAAATCTGGCAGTAGCTCTT+TGG + Chr4:56088172-56088191 MsG0480021266.01.T01:CDS 40.0%
AAATCTGGCAGTAGCTCTTT+GGG + Chr4:56088173-56088192 MsG0480021266.01.T01:CDS 40.0%
AACAAATTCAAGGGTCCAAG+TGG - Chr4:56088832-56088851 None:intergenic 40.0%
AATTCATTGCCTTTCCCATC+AGG - Chr4:56088616-56088635 None:intergenic 40.0%
ACAAATTCAAGGGTCCAAGT+GGG - Chr4:56088831-56088850 None:intergenic 40.0%
ACATTACGGTGTAAGCTCTT+CGG + Chr4:56086892-56086911 MsG0480021266.01.T01:CDS 40.0%
ATCAGATCCAAGTAGCAGAT+GGG + Chr4:56088196-56088215 MsG0480021266.01.T01:CDS 40.0%
ATTCATTGCCTTTCCCATCA+GGG - Chr4:56088615-56088634 None:intergenic 40.0%
CAACTTGGTAAACTCAGCTT+CGG + Chr4:56086523-56086542 MsG0480021266.01.T01:CDS 40.0%
CCATCTGAGCTTACGAAAAA+GGG + Chr4:56088644-56088663 MsG0480021266.01.T01:CDS 40.0%
GAAAGAGAGCAAATCCAGTA+TGG + Chr4:56088325-56088344 MsG0480021266.01.T01:CDS 40.0%
GAATGCTTAAGCAATGGTGA+GGG - Chr4:56087598-56087617 None:intergenic 40.0%
GCAGCTTGTGAAGATGTTAA+TGG - Chr4:56086389-56086408 None:intergenic 40.0%
GTATCAATGTCCATAGTGTC+GGG - Chr4:56087238-56087257 None:intergenic 40.0%
GTATGGCTGCATACTTTGTA+TGG + Chr4:56088767-56088786 MsG0480021266.01.T01:three_prime_UTR 40.0%
TACAAACCAGACTGCATTCT+TGG + Chr4:56086856-56086875 MsG0480021266.01.T01:CDS 40.0%
TACCAGCTATTGGATTATGC+GGG - Chr4:56086763-56086782 None:intergenic 40.0%
TAGTTACTTGTCACCATGGA+TGG + Chr4:56086004-56086023 MsG0480021266.01.T01:CDS 40.0%
TCAGAGATGGAGTCATAATC+GGG + Chr4:56088478-56088497 MsG0480021266.01.T01:CDS 40.0%
TCAGCAGAAGAATTATCACG+AGG + Chr4:56086974-56086993 MsG0480021266.01.T01:CDS 40.0%
TCCATCTGAGCTTACGAAAA+AGG + Chr4:56088643-56088662 MsG0480021266.01.T01:CDS 40.0%
TCCCGTTCAAAATTGTTGCA+AGG + Chr4:56086722-56086741 MsG0480021266.01.T01:CDS 40.0%
TGAATGCTTAAGCAATGGTG+AGG - Chr4:56087599-56087618 None:intergenic 40.0%
TTCAGCTAGAGGAAAAAACC+TGG + Chr4:56087992-56088011 MsG0480021266.01.T01:CDS 40.0%
TTCCTTCGCTTCAGTAAAAG+AGG - Chr4:56088426-56088445 None:intergenic 40.0%
TTCGTATTCCAAACCATCAC+AGG - Chr4:56088671-56088690 None:intergenic 40.0%
TTCTTCTCTTCTCTCTGCAA+AGG - Chr4:56086275-56086294 None:intergenic 40.0%
TTGAAAGAGCCAAGTTCTTC+AGG - Chr4:56086490-56086509 None:intergenic 40.0%
TTGTCGGACATTTCAAATCG+TGG - Chr4:56087189-56087208 None:intergenic 40.0%
! AAGTTTATGGTGGGGATTCA+TGG + Chr4:56088724-56088743 MsG0480021266.01.T01:three_prime_UTR 40.0%
! AGAAGCGTGATTTACTTGGT+GGG + Chr4:56086123-56086142 MsG0480021266.01.T01:CDS 40.0%
! AGAGAAGAATGTTTTGCACG+AGG + Chr4:56086286-56086305 MsG0480021266.01.T01:CDS 40.0%
! AGTTTATGGTGGGGATTCAT+GGG + Chr4:56088725-56088744 MsG0480021266.01.T01:three_prime_UTR 40.0%
! GAGAAGAATGTTTTGCACGA+GGG + Chr4:56086287-56086306 MsG0480021266.01.T01:CDS 40.0%
! GCCTTGCAACAATTTTGAAC+GGG - Chr4:56086726-56086745 None:intergenic 40.0%
! GGAAAAGAATCAAGCTTTGG+AGG + Chr4:56086323-56086342 MsG0480021266.01.T01:CDS 40.0%
! GTTGAGAAGCGTGATTTACT+TGG + Chr4:56086119-56086138 MsG0480021266.01.T01:CDS 40.0%
! TGCAACAATTTTGAACGGGA+AGG - Chr4:56086722-56086741 None:intergenic 40.0%
! TTCAATGCATGTTGATGAGG+AGG + Chr4:56086166-56086185 MsG0480021266.01.T01:CDS 40.0%
! TTCAGCGTGATATACGGTTT+TGG - Chr4:56088354-56088373 None:intergenic 40.0%
!! AAGTTATGATCCTTTTGGGG+TGG + Chr4:56089134-56089153 MsG0480021266.01.T01:three_prime_UTR 40.0%
!! ACAACGAAAGAGTTGGTATG+AGG - Chr4:56087775-56087794 None:intergenic 40.0%
!! CAAAACACTGGTTTGAGTGT+TGG + Chr4:56086062-56086081 MsG0480021266.01.T01:CDS 40.0%
!! TTGTATTCACTGACTTCTCC+AGG - Chr4:56088013-56088032 None:intergenic 40.0%
AAAAGGGTCCTGTGATGGTT+TGG + Chr4:56088660-56088679 MsG0480021266.01.T01:CDS 45.0%
AACGTCATTGCGGAACAACT+TGG + Chr4:56086508-56086527 MsG0480021266.01.T01:CDS 45.0%
AAGCTACTCATCTGCTTCTC+AGG - Chr4:56086683-56086702 None:intergenic 45.0%
AAGTTATGCACGTTCGACTC+TGG + Chr4:56088230-56088249 MsG0480021266.01.T01:CDS 45.0%
AATGCCTGCGTAATGCTCTT+GGG - Chr4:56086630-56086649 None:intergenic 45.0%
AATGGAACTACACCTGCAAC+AGG - Chr4:56087512-56087531 None:intergenic 45.0%
ACGTTCTGCTTATGGTGTGA+AGG + Chr4:56086925-56086944 MsG0480021266.01.T01:CDS 45.0%
AGCTACTCATCTGCTTCTCA+GGG - Chr4:56086682-56086701 None:intergenic 45.0%
ATTGGATTATGCGGGAAACG+AGG - Chr4:56086755-56086774 None:intergenic 45.0%
CAAAACTCGCTCTCAACTCA+AGG + Chr4:56087960-56087979 MsG0480021266.01.T01:CDS 45.0%
CACATCCTTGGATTCAGAGA+TGG + Chr4:56088465-56088484 MsG0480021266.01.T01:CDS 45.0%
CACGAGGGAGATGGAAAATT+TGG + Chr4:56086302-56086321 MsG0480021266.01.T01:CDS 45.0%
CGTTCTGCTTATGGTGTGAA+GGG + Chr4:56086926-56086945 MsG0480021266.01.T01:CDS 45.0%
CGTTTAACCCATCTGCTACT+TGG - Chr4:56088206-56088225 None:intergenic 45.0%
CTTTGAGCGGTAAACATGCA+TGG + Chr4:56087898-56087917 MsG0480021266.01.T01:intron 45.0%
GAAAAACTCGTGCGATGATC+AGG - Chr4:56087833-56087852 None:intergenic 45.0%
GAAGAGCTTACACCGTAATG+TGG - Chr4:56086893-56086912 None:intergenic 45.0%
GATCAGATCCAAGTAGCAGA+TGG + Chr4:56088195-56088214 MsG0480021266.01.T01:CDS 45.0%
GGACATGCAAGGTCAAAATC+TGG + Chr4:56088158-56088177 MsG0480021266.01.T01:CDS 45.0%
GGTGCAACAATTTCAGCTAG+AGG + Chr4:56087981-56088000 MsG0480021266.01.T01:CDS 45.0%
GTGTGTGACAACGAAAGAGT+TGG - Chr4:56087782-56087801 None:intergenic 45.0%
TAATGCCTGCGTAATGCTCT+TGG - Chr4:56086631-56086650 None:intergenic 45.0%
TACGAAAAAGGGTCCTGTGA+TGG + Chr4:56088655-56088674 MsG0480021266.01.T01:CDS 45.0%
TCGGACATAGTGCCTACAAA+TGG + Chr4:56086542-56086561 MsG0480021266.01.T01:CDS 45.0%
TGACTCCATCTCTGAATCCA+AGG - Chr4:56088473-56088492 None:intergenic 45.0%
TGGCTCTTTCAACGTCATTG+CGG + Chr4:56086498-56086517 MsG0480021266.01.T01:CDS 45.0%
TTCACACCATAAGCAGAACG+TGG - Chr4:56086926-56086945 None:intergenic 45.0%
TTCCCGCATAATCCAATAGC+TGG + Chr4:56086758-56086777 MsG0480021266.01.T01:CDS 45.0%
TTGACTCCAAGAATGCAGTC+TGG - Chr4:56086865-56086884 None:intergenic 45.0%
! AATGTTTTGCACGAGGGAGA+TGG + Chr4:56086293-56086312 MsG0480021266.01.T01:CDS 45.0%
! CATGTTGATGAGGAGGAGAT+TGG + Chr4:56086173-56086192 MsG0480021266.01.T01:CDS 45.0%
! GAGAAGCGTGATTTACTTGG+TGG + Chr4:56086122-56086141 MsG0480021266.01.T01:CDS 45.0%
! GCAGTCTGGTTTGTAATGTC+TGG - Chr4:56086851-56086870 None:intergenic 45.0%
! GTCCTCTTTTACTGAAGCGA+AGG + Chr4:56088421-56088440 MsG0480021266.01.T01:CDS 45.0%
! GTTATTGTCTCAAGGAGTGC+CGG + Chr4:56086442-56086461 MsG0480021266.01.T01:CDS 45.0%
! TGGTGAATTGAGTACTGCCT+GGG + Chr4:56088799-56088818 MsG0480021266.01.T01:three_prime_UTR 45.0%
! TTGGTGAATTGAGTACTGCC+TGG + Chr4:56088798-56088817 MsG0480021266.01.T01:three_prime_UTR 45.0%
!! AATACTTTTGGGGGTGGATC+TGG - Chr4:56088389-56088408 None:intergenic 45.0%
!! CCCTTTTTCGTAAGCTCAGA+TGG - Chr4:56088647-56088666 None:intergenic 45.0%
!! GAGTGTCGGTTATTGTCTCA+AGG + Chr4:56086434-56086453 MsG0480021266.01.T01:CDS 45.0%
!! TGGTTTGAGTGTTGGTTGTG+AGG + Chr4:56086070-56086089 MsG0480021266.01.T01:CDS 45.0%
!!! GAGCGAGTTTTGACTATCCT+TGG - Chr4:56087952-56087971 None:intergenic 45.0%
!!! TACGGTTTTGGCTTCCATAC+TGG - Chr4:56088342-56088361 None:intergenic 45.0%
AGAGTGGATGCTGCAATGCA+TGG + Chr4:56085978-56085997 MsG0480021266.01.T01:CDS 50.0%
ATCTCCTGAACCCGACACTA+TGG + Chr4:56087225-56087244 MsG0480021266.01.T01:CDS 50.0%
CAGGAGATGACTCATTCGCA+GGG - Chr4:56087213-56087232 None:intergenic 50.0%
CTAGTCTCCCTGTCAACCAT+GGG - Chr4:56088086-56088105 None:intergenic 50.0%
CTCACGTAAACGGACATGCA+AGG + Chr4:56088147-56088166 MsG0480021266.01.T01:CDS 50.0%
CTCCCTAGAGTTTCCAGCTT+CGG - Chr4:56087136-56087155 None:intergenic 50.0%
CTTGCATGTCCGTTTACGTG+AGG - Chr4:56088149-56088168 None:intergenic 50.0%
GACTCGAGCAGCACCATAAT+AGG - Chr4:56089051-56089070 None:intergenic 50.0%
GCAGCACACAAGGATTTCAC+CGG - Chr4:56086464-56086483 None:intergenic 50.0%
GCTTCGGACATTCCACAGTA+CGG - Chr4:56087120-56087139 None:intergenic 50.0%
GTACGAGCAGCAATCTCATC+CGG - Chr4:56085942-56085961 None:intergenic 50.0%
GTCCGAAGCTGGAAACTCTA+GGG + Chr4:56087131-56087150 MsG0480021266.01.T01:CDS 50.0%
TACTGTGGAATGTCCGAAGC+TGG + Chr4:56087120-56087139 MsG0480021266.01.T01:CDS 50.0%
TCAAGGGTCCAAGTGGGATA+TGG - Chr4:56088825-56088844 None:intergenic 50.0%
TCAGGAGATGACTCATTCGC+AGG - Chr4:56087214-56087233 None:intergenic 50.0%
TCATCTGCTTCTCAGGGACA+CGG - Chr4:56086676-56086695 None:intergenic 50.0%
TCTGTGATGCCTCAACTCAC+AGG + Chr4:56086581-56086600 MsG0480021266.01.T01:CDS 50.0%
TGCTGCTGACCTGAAGAACT+TGG + Chr4:56086478-56086497 MsG0480021266.01.T01:CDS 50.0%
TGCTTAAGCAATGGTGAGGG+TGG - Chr4:56087595-56087614 None:intergenic 50.0%
TGCTTCCAATGAGCCATCCA+TGG - Chr4:56086020-56086039 None:intergenic 50.0%
TGTCACCATGGATGGCTCAT+TGG + Chr4:56086012-56086031 MsG0480021266.01.T01:CDS 50.0%
TGTCCGAAGCTGGAAACTCT+AGG + Chr4:56087130-56087149 MsG0480021266.01.T01:CDS 50.0%
TTCCACAGTACGGTCACTAG+CGG - Chr4:56087110-56087129 None:intergenic 50.0%
! ACTAGTCTCCCTGTCAACCA+TGG - Chr4:56088087-56088106 None:intergenic 50.0%
! ATGTCCATAGTGTCGGGTTC+AGG - Chr4:56087232-56087251 None:intergenic 50.0%
! GCGTGATTTACTTGGTGGGT+CGG + Chr4:56086127-56086146 MsG0480021266.01.T01:CDS 50.0%
! GTTTCCAAGCATTGCTGCCA+TGG + Chr4:56088589-56088608 MsG0480021266.01.T01:CDS 50.0%
ATTGCTGCCATGGCCCTGAT+GGG + Chr4:56088599-56088618 MsG0480021266.01.T01:CDS 55.0%
CATCCACTCTCTCGCCATCA+CGG - Chr4:56085968-56085987 None:intergenic 55.0%
CGAGGACCACGTTCTGCTTA+TGG + Chr4:56086917-56086936 MsG0480021266.01.T01:CDS 55.0%
CTCGATCCACCTGTGAGTTG+AGG - Chr4:56086593-56086612 None:intergenic 55.0%
CTTCAGGTCAGCAGCACACA+AGG - Chr4:56086474-56086493 None:intergenic 55.0%
GAACTACACCTGCAACAGGC+AGG - Chr4:56087508-56087527 None:intergenic 55.0%
GACTCATTCGCAGGGCTTGT+CGG - Chr4:56087205-56087224 None:intergenic 55.0%
GCCAGAGTGAGAAGCTCATG+AGG - Chr4:56088059-56088078 None:intergenic 55.0%
GCCTCATGAGCTTCTCACTC+TGG + Chr4:56088055-56088074 MsG0480021266.01.T01:CDS 55.0%
GGCAAGTCCCATGGTTGACA+GGG + Chr4:56088076-56088095 MsG0480021266.01.T01:CDS 55.0%
GTGATGCCTCAACTCACAGG+TGG + Chr4:56086584-56086603 MsG0480021266.01.T01:CDS 55.0%
TACACCTGCAACAGGCAGGA+AGG - Chr4:56087504-56087523 None:intergenic 55.0%
TCCACAGTACGGTCACTAGC+GGG - Chr4:56087109-56087128 None:intergenic 55.0%
TCTCACTCTGGCAAGTCCCA+TGG + Chr4:56088067-56088086 MsG0480021266.01.T01:CDS 55.0%
TGCACGTTCGACTCTGGTCA+TGG + Chr4:56088236-56088255 MsG0480021266.01.T01:CDS 55.0%
TGGCAAGTCCCATGGTTGAC+AGG + Chr4:56088075-56088094 MsG0480021266.01.T01:CDS 55.0%
! TTACTTGGTGGGTCGGACGT+TGG + Chr4:56086134-56086153 MsG0480021266.01.T01:CDS 55.0%
!! GCATCCCAAGAGCATTACGC+AGG + Chr4:56086623-56086642 MsG0480021266.01.T01:CDS 55.0%
ACAGTACGGTCACTAGCGGG+TGG - Chr4:56087106-56087125 None:intergenic 60.0%
ACCCGCTAGTGACCGTACTG+TGG + Chr4:56087105-56087124 MsG0480021266.01.T01:CDS 60.0%
AGGGCCATGGCAGCAATGCT+TGG - Chr4:56088596-56088615 None:intergenic 60.0%
CACTCTCTCGCCATCACGGT+AGG - Chr4:56085964-56085983 None:intergenic 60.0%
CATTGCTGCCATGGCCCTGA+TGG + Chr4:56088598-56088617 MsG0480021266.01.T01:CDS 60.0%
GCTGCTCGTACCTACCGTGA+TGG + Chr4:56085951-56085970 MsG0480021266.01.T01:CDS 60.0%
GTCCAAGTGGGATATGGCCC+AGG - Chr4:56088819-56088838 None:intergenic 60.0%
TGCCATGGCCCTGATGGGAA+AGG + Chr4:56088604-56088623 MsG0480021266.01.T01:CDS 60.0%
TGCCTGGGCCATATCCCACT+TGG + Chr4:56088814-56088833 MsG0480021266.01.T01:three_prime_UTR 60.0%
TGCCTTTCCCATCAGGGCCA+TGG - Chr4:56088609-56088628 None:intergenic 60.0%
TGCTCCTTCCTGCCTGTTGC+AGG + Chr4:56087497-56087516 MsG0480021266.01.T01:intron 60.0%
! CTACCGTGATGGCGAGAGAG+TGG + Chr4:56085962-56085981 MsG0480021266.01.T01:CDS 60.0%
GGTGTAAGCTCTTCGGCGCG+AGG + Chr4:56086899-56086918 MsG0480021266.01.T01:CDS 65.0%
! CGGTCACTAGCGGGTGGAGT+CGG - Chr4:56087100-56087119 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 56085936 56089189 56085936 ID=MsG0480021266.01;Name=MsG0480021266.01
Chr4 mRNA 56085936 56089189 56085936 ID=MsG0480021266.01.T01;Parent=MsG0480021266.01;Name=MsG0480021266.01.T01;_AED=0.17;_eAED=0.17;_QI=0|1|0.66|1|1|1|3|489|708
Chr4 exon 56085936 56087280 56085936 ID=MsG0480021266.01.T01:exon:6339;Parent=MsG0480021266.01.T01
Chr4 exon 56087519 56087544 56087519 ID=MsG0480021266.01.T01:exon:6340;Parent=MsG0480021266.01.T01
Chr4 exon 56087945 56089189 56087945 ID=MsG0480021266.01.T01:exon:6341;Parent=MsG0480021266.01.T01
Chr4 CDS 56085936 56087280 56085936 ID=MsG0480021266.01.T01:cds;Parent=MsG0480021266.01.T01
Chr4 CDS 56087519 56087544 56087519 ID=MsG0480021266.01.T01:cds;Parent=MsG0480021266.01.T01
Chr4 CDS 56087945 56088700 56087945 ID=MsG0480021266.01.T01:cds;Parent=MsG0480021266.01.T01
Chr4 three_prime_UTR 56088701 56089189 56088701 ID=MsG0480021266.01.T01:three_prime_utr;Parent=MsG0480021266.01.T01
Gene Sequence

>MsG0480021266.01.T01

ATGCCGGATGAGATTGCTGCTCGTACCTACCGTGATGGCGAGAGAGTGGATGCTGCAATGCATGGTTATAGTTACTTGTCACCATGGATGGCTCATTGGAAGCACACAAGTTACAAGCCAACAAAACAAAACACTGGTTTGAGTGTTGGTTGTGAGGTTAATGAACTGAAAGAAGAGAGTGATGTTGAGAAGCGTGATTTACTTGGTGGGTCGGACGTTGGATCAGATAGTTCAATGCATGTTGATGAGGAGGAGATTGGAAAATTGAAGAATGCAAGCTTTGATTCCAAGTCATTTCTTATATCACGTCTTTCTCAAAACAAAAATGGAAGAGTGCCTTTGCAGAGAGAAGAGAAGAATGTTTTGCACGAGGGAGATGGAAAATTTGGAAAAGAATCAAGCTTTGGAGGTGATAATGTTTTTATCAACAGAGGTGGGGATCACTTGTTGCCATTAACATCTTCACAAGCTGCTCCTAAAATAGAAACTTCGATAAAAGAGTGTCGGTTATTGTCTCAAGGAGTGCCGGTGAAATCCTTGTGTGCTGCTGACCTGAAGAACTTGGCTCTTTCAACGTCATTGCGGAACAACTTGGTAAACTCAGCTTCGGACATAGTGCCTACAAATGGACGTGAAAAAGAAAAATCTGTGATGCCTCAACTCACAGGTGGATCGAGCTACAATTCAGCATCCCAAGAGCATTACGCAGGCATTAAATATCACAGTTATTCTTCTCTCCGTGTCCCTGAGAAGCAGATGAGTAGCTTGTTAGACTCTCAAAGACCTTCCCGTTCAAAATTGTTGCAAGGCAGTTTTCCTCGTTTCCCGCATAATCCAATAGCTGGTAATGATGATGATGGACTATATGCTGTTCATAGTCAGCACCACAAGATTCAAAATTTAATTGCTAATCCAGACATTACAAACCAGACTGCATTCTTGGAGTCAACTAAACCACATTACGGTGTAAGCTCTTCGGCGCGAGGACCACGTTCTGCTTATGGTGTGAAGGGTGCAAAAATTTACGCCCGTATAGATTCAGCAGAAGAATTATCACGAGGTCATCCCAATATTTCCCAGACAACACATCAGTTCTTTAGCGAATCAATGGCACCTACCAAAATTAAAGGAAATAATTTCAATGAGATTCTTGATTTATCTCCGACTCCACCCGCTAGTGACCGTACTGTGGAATGTCCGAAGCTGGAAACTCTAGGGAGCTCCAGAAAGAGTGAAGAAAACGAAAATATCCACGATTTGAAATGTCCGACAAGCCCTGCGAATGAGTCATCTCCTGAACCCGACACTATGGACATTGATACTTTACATGAGAATAATCTTGCAGGTGTAGTTCCATTGCTATCTAATAAGTGCTCCAAGGATAGTCAAAACTCGCTCTCAACTCAAGGTGCAACAATTTCAGCTAGAGGAAAAAACCTGGAGAAGTCAGTGAATACAACACTACCAGATATAAATAAAAGGCCTCATGAGCTTCTCACTCTGGCAAGTCCCATGGTTGACAGGGAGACTAGTACATCAAGAACTCACAGCCTTGATGTTGAACAACTTTTTCCTCACGTAAACGGACATGCAAGGTCAAAATCTGGCAGTAGCTCTTTGGGATCAGATCCAAGTAGCAGATGGGTTAAACGACTCAAGTTATGCACGTTCGACTCTGGTCATGGTACCAAGAGTGAAAATATTGGAGAACCTTCACATGTAAAATCAACAAATATTTTCAGCAAAATTATGAAAGAGAGCAAATCCAGTATGGAAGCCAAAACCGTATATCACGCTGAAGGAATAACTGTTCCAGATCCACCCCCAAAAGTATTATCAAACGACGAGTCCTCTTTTACTGAAGCGAAGGAAACTGTAGATATTACACTTTCACATCCTTGGATTCAGAGATGGAGTCATAATCGGGCTGCATGTCCCAAAAAGATGCATGAATCAGTGGAGAATCATGAATCAAAGTCTTCAAACAGTGTGAAAGAACAGTTTAAAAACAAGCAGTTTCCAAGCATTGCTGCCATGGCCCTGATGGGAAAGGCAATGAATTGTTTGAATCCATCTGAGCTTACGAAAAAGGGTCCTGTGATGGTTTGGAATACGAAGAGACTTTGA
Protein sequence

>MsG0480021266.01.T01

MPDEIAARTYRDGERVDAAMHGYSYLSPWMAHWKHTSYKPTKQNTGLSVGCEVNELKEESDVEKRDLLGGSDVGSDSSMHVDEEEIGKLKNASFDSKSFLISRLSQNKNGRVPLQREEKNVLHEGDGKFGKESSFGGDNVFINRGGDHLLPLTSSQAAPKIETSIKECRLLSQGVPVKSLCAADLKNLALSTSLRNNLVNSASDIVPTNGREKEKSVMPQLTGGSSYNSASQEHYAGIKYHSYSSLRVPEKQMSSLLDSQRPSRSKLLQGSFPRFPHNPIAGNDDDGLYAVHSQHHKIQNLIANPDITNQTAFLESTKPHYGVSSSARGPRSAYGVKGAKIYARIDSAEELSRGHPNISQTTHQFFSESMAPTKIKGNNFNEILDLSPTPPASDRTVECPKLETLGSSRKSEENENIHDLKCPTSPANESSPEPDTMDIDTLHENNLAGVVPLLSNKCSKDSQNSLSTQGATISARGKNLEKSVNTTLPDINKRPHELLTLASPMVDRETSTSRTHSLDVEQLFPHVNGHARSKSGSSSLGSDPSSRWVKRLKLCTFDSGHGTKSENIGEPSHVKSTNIFSKIMKESKSSMEAKTVYHAEGITVPDPPPKVLSNDESSFTEAKETVDITLSHPWIQRWSHNRAACPKKMHESVENHESKSSNSVKEQFKNKQFPSIAAMALMGKAMNCLNPSELTKKGPVMVWNTKRL*