AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021987.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021987.01.T01 MTR_4g080160 99.187 861 7 0 33 893 1 861 0.0 1776
MsG0480021987.01.T01 MTR_1g109620 65.299 853 285 3 33 883 1 844 0.0 1209
MsG0480021987.01.T01 MTR_1g032730 64.610 859 285 9 33 881 1 850 0.0 1162
MsG0480021987.01.T01 MTR_8g105740 63.944 857 292 7 33 881 1 848 0.0 1162
MsG0480021987.01.T01 MTR_8g063790 64.277 823 286 2 64 884 25 841 0.0 1135
MsG0480021987.01.T01 MTR_4g129270 58.756 788 313 6 99 880 57 838 0.0 976
MsG0480021987.01.T01 MTR_4g129270 59.227 699 277 5 99 791 57 753 0.0 880
MsG0480021987.01.T01 MTR_3g078210 54.860 751 336 2 122 870 3 752 0.0 852
MsG0480021987.01.T01 MTR_3g467030 48.744 597 278 3 100 696 1 569 0.0 568
MsG0480021987.01.T01 MTR_2g073260 33.865 753 438 19 99 831 124 836 2.13e-141 444
MsG0480021987.01.T01 MTR_0034s0170 33.822 751 438 19 99 829 85 796 6.83e-134 424
MsG0480021987.01.T01 MTR_8g087910 34.746 354 200 8 75 419 53 384 1.38e-67 231
MsG0480021987.01.T01 MTR_8g087930 30.332 422 247 12 427 831 11 402 3.14e-52 191
MsG0480021987.01.T01 MTR_3g076810 51.880 133 63 1 99 231 39 170 1.20e-41 150
MsG0480021987.01.T01 MTR_3g467040 49.558 113 57 0 520 632 110 222 3.26e-30 119
MsG0480021987.01.T01 MTR_3g467040 33.793 145 91 2 347 488 1 143 1.05e-20 92.4
MsG0480021987.01.T01 MTR_3g008500 28.521 284 158 12 620 876 114 379 2.45e-12 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021987.01.T01 AT1G06410 78.026 851 176 3 33 883 1 840 0.0 1382
MsG0480021987.01.T01 AT1G06410 78.026 851 176 3 33 883 1 840 0.0 1382
MsG0480021987.01.T01 AT1G06410 78.026 851 176 3 33 883 1 840 0.0 1382
MsG0480021987.01.T01 AT4G17770 62.818 866 304 6 33 893 1 853 0.0 1171
MsG0480021987.01.T01 AT4G17770 62.818 866 304 6 33 893 1 853 0.0 1171
MsG0480021987.01.T01 AT1G68020 62.673 868 292 6 33 881 1 855 0.0 1144
MsG0480021987.01.T01 AT1G68020 62.673 868 292 6 33 881 1 855 0.0 1144
MsG0480021987.01.T01 AT1G70290 60.660 849 318 4 33 878 1 836 0.0 1097
MsG0480021987.01.T01 AT1G23870 59.696 856 330 3 33 883 1 846 0.0 1093
MsG0480021987.01.T01 AT1G60140 60.539 854 328 2 33 884 1 847 0.0 1086
MsG0480021987.01.T01 AT1G60140 60.539 854 328 2 33 884 1 847 0.0 1086
MsG0480021987.01.T01 AT1G60140 60.539 854 328 2 33 884 1 847 0.0 1086
MsG0480021987.01.T01 AT1G60140 60.539 854 328 2 33 884 1 847 0.0 1086
MsG0480021987.01.T01 AT1G60140 60.539 854 328 2 33 884 1 847 0.0 1086
MsG0480021987.01.T01 AT2G18700 58.561 806 322 6 87 883 36 838 0.0 1009
MsG0480021987.01.T01 AT1G70290 57.008 849 311 5 33 878 1 798 0.0 1007
MsG0480021987.01.T01 AT1G60140 61.367 761 285 2 33 791 1 754 0.0 983
MsG0480021987.01.T01 AT1G68020 62.990 689 223 6 33 702 1 676 0.0 918
MsG0480021987.01.T01 AT1G16980 33.499 806 475 23 99 883 13 778 2.63e-142 442
MsG0480021987.01.T01 AT1G78580 33.421 757 434 21 99 829 93 805 6.09e-136 429
MsG0480021987.01.T01 AT1G78580 33.421 757 434 21 99 829 93 805 6.09e-136 429
MsG0480021987.01.T01 AT1G78580 33.421 757 434 21 99 829 93 805 6.09e-136 429
MsG0480021987.01.T01 AT1G78580 33.421 757 434 21 99 829 93 805 6.09e-136 429
MsG0480021987.01.T01 AT4G27550 31.598 826 479 22 99 882 5 786 3.76e-135 423
MsG0480021987.01.T01 AT4G27550 32.005 828 482 23 99 882 5 795 1.03e-134 422
MsG0480021987.01.T01 AT1G16980 35.105 621 353 18 99 709 13 593 3.39e-118 375

Find 231 sgRNAs with CRISPR-Local

Find 400 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCCGGAGGATGATTATATT+TGG 0.168883 4:-66836003 MsG0480021987.01.T01:CDS
TGTGGTAATTGCTCTGATTT+TGG 0.190443 4:-66834008 MsG0480021987.01.T01:CDS
AGGTATAAATTTGAAGATTC+TGG 0.215594 4:-66835549 MsG0480021987.01.T01:CDS
CAAAGAGGTCATATCTCTTT+TGG 0.226862 4:-66834757 MsG0480021987.01.T01:CDS
ACTGAGGTTTCTCCTGATTT+AGG 0.229245 4:-66832424 MsG0480021987.01.T01:three_prime_UTR
TTTGCTTGGACTCTTATTAA+TGG 0.243265 4:+66834776 None:intergenic
CCCGACCCCGATCCCATTGC+TGG 0.248765 4:+66836559 None:intergenic
ATTACAAGCATGCTCTTCTT+TGG 0.251977 4:+66835185 None:intergenic
AATAAATATGCTAGAATCTT+TGG 0.258899 4:-66832511 MsG0480021987.01.T01:CDS
TCTGTATATAGTTTCATTAC+AGG 0.258995 4:+66833966 None:intergenic
AGGGATGCCGACCTTGGTTT+TGG 0.277265 4:-66833888 MsG0480021987.01.T01:CDS
TTTGCTTGGTATTGACGATA+TGG 0.281634 4:-66835582 MsG0480021987.01.T01:CDS
TTCGCATTGGAACTTGATTC+AGG 0.291144 4:+66835212 None:intergenic
ACAGCTCTTCCTTGCCATTT+GGG 0.295677 4:+66835500 None:intergenic
GTAATATTCTTTGCGACAAT+TGG 0.295825 4:-66832369 MsG0480021987.01.T01:three_prime_UTR
TCCCAGAAGCCAAATCTAAA+AGG 0.296805 4:+66836587 None:intergenic
CCAGCAATGGGATCGGGGTC+GGG 0.301443 4:-66836559 MsG0480021987.01.T01:CDS
CAGCAATGGGATCGGGGTCG+GGG 0.303867 4:-66836558 MsG0480021987.01.T01:CDS
AGATAATACTTTGCTTTACT+TGG 0.315020 4:+66832552 None:intergenic
GACGAGCATAATCGAAAGTA+TGG 0.320887 4:+66835810 None:intergenic
CTCTAGCAGGGTTAACTATC+TGG 0.321636 4:+66835471 None:intergenic
TTCTTTGCTATTACAGCTTA+AGG 0.321784 4:-66836326 MsG0480021987.01.T01:CDS
GCTTCTGCAAAAGGCAATTA+TGG 0.326836 4:-66836147 MsG0480021987.01.T01:CDS
AACAGCTCTTCCTTGCCATT+TGG 0.326987 4:+66835499 None:intergenic
TTGTAATATCAGAATTTATT+GGG 0.327538 4:-66835169 MsG0480021987.01.T01:CDS
TTTAGTATCTCCTCCCTAAC+AGG 0.334244 4:+66835863 None:intergenic
CAATATATTCATAAGGAGTT+AGG 0.335793 4:+66835258 None:intergenic
CTTGTAATATCAGAATTTAT+TGG 0.336765 4:-66835170 MsG0480021987.01.T01:CDS
TTACTAAATTCTGATATCAT+TGG 0.338425 4:-66835836 MsG0480021987.01.T01:CDS
TATCTAGGATTGGAATATTA+CGG 0.338808 4:-66835731 MsG0480021987.01.T01:CDS
CCCGGAGGATGATTATATTT+GGG 0.339590 4:-66836002 MsG0480021987.01.T01:CDS
GGAGAAACCTCAGTCAAGTT+TGG 0.341491 4:+66832433 None:intergenic
TGACCACTCTTTGCGGCAAC+AGG 0.344178 4:+66833810 None:intergenic
TATATAGGACTCTTCCTGTT+AGG 0.344777 4:-66835877 MsG0480021987.01.T01:CDS
GCACTCATGACGTGGCTTAC+TGG 0.351395 4:-66835010 MsG0480021987.01.T01:CDS
ACACTCAGCAAGGCTGTAAT+AGG 0.352058 4:+66835313 None:intergenic
GTGCTTTGGTTTGGCAATAC+AGG 0.355182 4:-66833908 MsG0480021987.01.T01:CDS
ACTTTCCTTTCGTTCAATAC+TGG 0.357028 4:+66833929 None:intergenic
TTACAAGCATGCTCTTCTTT+GGG 0.358274 4:+66835186 None:intergenic
GTTTGTAGACAGGGAATATC+TGG 0.365870 4:-66835236 MsG0480021987.01.T01:CDS
AAGTAAAGCAAAGTATTATC+TGG 0.370428 4:-66832550 MsG0480021987.01.T01:CDS
TCACCATGCATAGAAGAATC+TGG 0.371337 4:-66832471 MsG0480021987.01.T01:CDS
CTCTCCATCACTCATTGAAA+TGG 0.371727 4:+66835070 None:intergenic
TAATATTCTTTGCGACAATT+GGG 0.374062 4:-66832368 MsG0480021987.01.T01:three_prime_UTR
GGATGGATTTCCAGAAGATA+TGG 0.376566 4:-66836305 MsG0480021987.01.T01:CDS
TCCTGCTGCAGTCGTATGTT+GGG 0.381549 4:-66835779 MsG0480021987.01.T01:CDS
AGATCATCTAGAAAGTGTTT+TGG 0.381754 4:-66833841 MsG0480021987.01.T01:CDS
GGTTCATGATTACCATTTGA+TGG 0.383452 4:-66835981 MsG0480021987.01.T01:CDS
TACAGAACCTCCATATCTTC+TGG 0.384072 4:+66836295 None:intergenic
AATTTCCCAGCAATGGGATC+GGG 0.387783 4:-66836565 MsG0480021987.01.T01:CDS
TTCCATCATCGGAGATATAT+AGG 0.388493 4:-66835892 MsG0480021987.01.T01:CDS
ATCTAGGATTGGAATATTAC+GGG 0.399527 4:-66835730 MsG0480021987.01.T01:CDS
AGTTTCCCATTCACCGTCTT+GGG 0.399757 4:+66834031 None:intergenic
ACCATCATAGTCCAACAAAA+TGG 0.400346 4:+66834818 None:intergenic
TGAATATATTGTTTGTAGAC+AGG 0.403035 4:-66835246 MsG0480021987.01.T01:CDS
CTTTGCGGCAACAGGCTCAT+TGG 0.407919 4:+66833818 None:intergenic
CAATGGGATCGGGGTCGGGG+AGG 0.407950 4:-66836555 MsG0480021987.01.T01:CDS
TTCCTGCTGCAGTCGTATGT+TGG 0.414477 4:-66835780 MsG0480021987.01.T01:CDS
TGAACGAAAGGAAAGTGCTT+TGG 0.417964 4:-66833922 MsG0480021987.01.T01:CDS
AGCAGGATCAACAGAGTGTT+TGG 0.419750 4:-66835398 MsG0480021987.01.T01:CDS
CTTCTTTGGGCTATTCGCAT+TGG 0.422173 4:+66835199 None:intergenic
GAAAGGAAAGTGCTTTGGTT+TGG 0.425700 4:-66833917 MsG0480021987.01.T01:CDS
ATCGTCAATACCAAGCAAAA+TGG 0.428223 4:+66835586 None:intergenic
TAAAAGTTTGCCAAAACATC+AGG 0.429012 4:+66836175 None:intergenic
TTTATGATGGCTTCTGCAAA+AGG 0.429950 4:-66836156 MsG0480021987.01.T01:CDS
CTCAGAGGTGGATGATGATC+AGG 0.430895 4:-66836479 MsG0480021987.01.T01:CDS
GGTGGTCCCAAGACGGTGAA+TGG 0.434178 4:-66834037 MsG0480021987.01.T01:CDS
AAAGCTCTCAATTGATGCTA+TGG 0.434592 4:-66834871 MsG0480021987.01.T01:CDS
TCTTAGCTTTCAAAGGTAGC+TGG 0.435142 4:+66836392 None:intergenic
AAACGCCTTCTTAGAAAAGT+TGG 0.435169 4:+66835953 None:intergenic
TTCTGGGAATTTCCCAGCAA+TGG 0.440101 4:-66836572 MsG0480021987.01.T01:CDS
TCTGTATTTGCTTGCACGGT+TGG 0.440122 4:-66832582 MsG0480021987.01.T01:CDS
GGTGTTCTCCATCGCTTAGT+GGG 0.441085 4:-66835148 MsG0480021987.01.T01:CDS
TGGGGAATAGGTCTTAGCTT+TGG 0.442950 4:-66834927 MsG0480021987.01.T01:CDS
GTTAACCCTGCTAGAGGTAA+AGG 0.443791 4:-66835464 MsG0480021987.01.T01:CDS
GGGTGTTCTCCATCGCTTAG+TGG 0.443816 4:-66835149 MsG0480021987.01.T01:CDS
GATCTGTCAATAAACACAAT+AGG 0.448371 4:+66835359 None:intergenic
TGATGTATCACAGTATTTGC+TGG 0.449009 4:-66836230 MsG0480021987.01.T01:CDS
TGTATCCCTTTACCTCTAGC+AGG 0.449011 4:+66835458 None:intergenic
TGCGGCATGAAAAGCATTAT+CGG 0.451086 4:-66835040 MsG0480021987.01.T01:CDS
GTGTTATTGTCACAGCTGTA+AGG 0.453106 4:-66835292 MsG0480021987.01.T01:CDS
CTTGGAATTGCTGCAGAACA+TGG 0.454255 4:-66834642 MsG0480021987.01.T01:CDS
GTATTAAGATCATGCCTGTT+GGG 0.456048 4:-66835697 MsG0480021987.01.T01:CDS
GAACATAGGCTTCCCACAAA+TGG 0.459768 4:+66836068 None:intergenic
CCCAGCAATGGGATCGGGGT+CGG 0.460165 4:-66836560 MsG0480021987.01.T01:CDS
TCTGGGAATTTCCCAGCAAT+GGG 0.460266 4:-66836571 MsG0480021987.01.T01:CDS
GATAAACTGACCACTCTTTG+CGG 0.461574 4:+66833803 None:intergenic
TCAGGCAGTAAGTGTTTCTT+CGG 0.462017 4:-66836461 MsG0480021987.01.T01:CDS
CATTGTTAGTGGACGGGGTA+GGG 0.464339 4:-66834700 MsG0480021987.01.T01:CDS
TGCTGAAACAACACCCCAAA+TGG 0.466478 4:-66835514 MsG0480021987.01.T01:CDS
TAAAAGGTTTGTATACGATC+TGG 0.467408 4:+66836603 None:intergenic
AAATTTGAAGATTCTGGCTA+TGG 0.469132 4:-66835543 MsG0480021987.01.T01:CDS
CAGTCAAAGAGGGGTTATCT+AGG 0.470100 4:-66835746 MsG0480021987.01.T01:CDS
GCAGTTGCTTCAACATTCCA+TGG 0.470653 4:+66835110 None:intergenic
CACCATGCATAGAAGAATCT+GGG 0.476735 4:-66832470 MsG0480021987.01.T01:CDS
AATGGGATCGGGGTCGGGGA+GGG 0.477370 4:-66836554 MsG0480021987.01.T01:CDS
ACCGCTTTGATCGCCATTTG+TGG 0.477691 4:-66836081 MsG0480021987.01.T01:CDS
ACCCAAATATAATCATCCTC+CGG 0.481751 4:+66836001 None:intergenic
CGATCAGAAGAAATAGTTGA+CGG 0.482348 4:+66836433 None:intergenic
TGCTTCTGTATTTGCTTGCA+CGG 0.482357 4:-66832586 MsG0480021987.01.T01:CDS
AAGTTTCCCATTCACCGTCT+TGG 0.485112 4:+66834030 None:intergenic
ATATAGGACTCTTCCTGTTA+GGG 0.485478 4:-66835876 MsG0480021987.01.T01:CDS
CAGCTTGTTTGCCAGAACAT+AGG 0.487233 4:+66836054 None:intergenic
CCGAGGGTTATGAGTGTCCC+GGG 0.488412 4:-66836508 MsG0480021987.01.T01:CDS
AGCAAATACAGAAGCATTGG+AGG 0.488464 4:+66832593 None:intergenic
TATATCTCCGATGATGGAAA+GGG 0.489420 4:+66835896 None:intergenic
CGACCCATGTGAATCCCAAC+AGG 0.490514 4:+66835683 None:intergenic
ACCCAACATACGACTGCAGC+AGG 0.490840 4:+66835778 None:intergenic
AATGACTGAAAGTGACAAAC+AGG 0.491293 4:-66832703 MsG0480021987.01.T01:CDS
CCGCTTTGATCGCCATTTGT+GGG 0.494408 4:-66836080 MsG0480021987.01.T01:CDS
GTCCTATATATCTCCGATGA+TGG 0.496938 4:+66835890 None:intergenic
GCCGAGGGTTATGAGTGTCC+CGG 0.498721 4:-66836509 MsG0480021987.01.T01:CDS
AACTTTCTTCTATTTCAGAA+TGG 0.500344 4:+66835423 None:intergenic
TTTGTGGGAAGCCTATGTTC+TGG 0.500908 4:-66836065 MsG0480021987.01.T01:CDS
CTACAAACAATATATTCATA+AGG 0.502334 4:+66835251 None:intergenic
GATATGGAGGTTCTGTATGT+TGG 0.504909 4:-66836289 MsG0480021987.01.T01:CDS
GTAGGGATAGCTTAAGTGAA+TGG 0.505507 4:-66834683 MsG0480021987.01.T01:CDS
TCCACCTCTGAGACAATCCC+CGG 0.508028 4:+66836490 None:intergenic
CCCAAATATAATCATCCTCC+GGG 0.508556 4:+66836002 None:intergenic
GCATAGCCCCTTTCCATCAT+CGG 0.508587 4:-66835903 MsG0480021987.01.T01:CDS
GCTGACTTTGTCCTGTGTGT+TGG 0.508603 4:-66832681 MsG0480021987.01.T01:CDS
AAAGAGGGGTTATCTAGGAT+TGG 0.508611 4:-66835741 MsG0480021987.01.T01:CDS
GAATTTCCCAGCAATGGGAT+CGG 0.509309 4:-66836566 MsG0480021987.01.T01:CDS
GATAAACAAAGAAAATGAAA+AGG 0.509859 4:+66832317 None:intergenic
TGCTTTGGTTTGGCAATACA+GGG 0.511440 4:-66833907 MsG0480021987.01.T01:CDS
GATGTCGGATGAGGAGTGTA+AGG 0.511899 4:-66835642 MsG0480021987.01.T01:CDS
AACAGAGTGTTTGGACGACC+TGG 0.514305 4:-66835389 MsG0480021987.01.T01:CDS
GAGCTCAAACAGCAATTTGA+AGG 0.515176 4:-66835614 MsG0480021987.01.T01:CDS
CAGCTCTTCCTTGCCATTTG+GGG 0.515782 4:+66835501 None:intergenic
TTAACCCTGCTAGAGGTAAA+GGG 0.516128 4:-66835463 MsG0480021987.01.T01:CDS
AAGAACGAAGGCGGATGCCG+AGG 0.520114 4:-66836525 MsG0480021987.01.T01:CDS
CAATACAGGGATGCCGACCT+TGG 0.520176 4:-66833894 MsG0480021987.01.T01:CDS
TCATTGTTAGTGGACGGGGT+AGG 0.521156 4:-66834701 MsG0480021987.01.T01:CDS
AGACATGGAGAGGGCTTGCA+CGG 0.522594 4:-66834970 MsG0480021987.01.T01:CDS
ATATATCTCCGATGATGGAA+AGG 0.524519 4:+66835895 None:intergenic
AGAGATATGACCTCTTTGCT+TGG 0.525145 4:+66834762 None:intergenic
GCAAGCAAATACAGAAGCAT+TGG 0.525460 4:+66832590 None:intergenic
GTGGTCCCAAGACGGTGAAT+GGG 0.525548 4:-66834036 MsG0480021987.01.T01:CDS
TTACAAGAGGGCAAAGAGTA+GGG 0.528130 4:-66834841 MsG0480021987.01.T01:CDS
TATTGTGTTTATTGACAGAT+CGG 0.528425 4:-66835357 MsG0480021987.01.T01:CDS
CTGTTGGGATTCACATGGGT+CGG 0.529805 4:-66835682 MsG0480021987.01.T01:CDS
TTGCTATTACAGCTTAAGGA+TGG 0.530659 4:-66836322 MsG0480021987.01.T01:CDS
AGAACGAAGGCGGATGCCGA+GGG 0.530953 4:-66836524 MsG0480021987.01.T01:CDS
AGCTTACGTCACGGACCGAT+AGG 0.533544 4:+66837612 None:intergenic
TAGCTTTGGATTTAGAGTTG+TGG 0.534487 4:-66834913 MsG0480021987.01.T01:CDS
TTGTGATTTAAAATTCCTAT+CGG 0.536022 4:-66837627 MsG0480021987.01.T01:CDS
CTTACAAGAGGGCAAAGAGT+AGG 0.537232 4:-66834842 MsG0480021987.01.T01:CDS
GATACATCATCTTGTTCAGC+GGG 0.537461 4:+66836244 None:intergenic
ACATCAGGAGGCAGAAAAGT+GGG 0.540834 4:+66836190 None:intergenic
GGGCTATCCGTGTCAATCCA+TGG 0.541240 4:-66835127 MsG0480021987.01.T01:CDS
ACGTAGTTTCTTGCAAGACA+TGG 0.542110 4:-66834985 MsG0480021987.01.T01:CDS
AAGTTGGCAGCACCATCAAA+TGG 0.542653 4:+66835969 None:intergenic
GAATATATTGTTTGTAGACA+GGG 0.549934 4:-66835245 MsG0480021987.01.T01:CDS
TGTTATGAGGATGTCGGATG+AGG 0.553523 4:-66835651 MsG0480021987.01.T01:CDS
AGTATTAAGATCATGCCTGT+TGG 0.555153 4:-66835698 MsG0480021987.01.T01:CDS
AAATAGAAGAAAGTTGCAGC+AGG 0.559745 4:-66835415 MsG0480021987.01.T01:CDS
CCGACCCCGATCCCATTGCT+GGG 0.564119 4:+66836560 None:intergenic
AAACAAGCTGTTCTTTCAGA+AGG 0.565229 4:-66836041 MsG0480021987.01.T01:CDS
CCCGGGACACTCATAACCCT+CGG 0.570549 4:+66836508 None:intergenic
ATTGTCACAGCTGTAAGGGA+TGG 0.572045 4:-66835287 MsG0480021987.01.T01:CDS
CTTGAATCCAAACTTGACTG+AGG 0.572634 4:-66832440 MsG0480021987.01.T01:exon
TCCCCAGATTCTTCTATGCA+TGG 0.572909 4:+66832468 None:intergenic
AACATCAGGAGGCAGAAAAG+TGG 0.573267 4:+66836189 None:intergenic
GAAGCCATTTCAATGAGTGA+TGG 0.574264 4:-66835074 MsG0480021987.01.T01:CDS
GAGCCTGTTGCCGCAAAGAG+TGG 0.574335 4:-66833813 MsG0480021987.01.T01:CDS
TTGTCACAGCTGTAAGGGAT+GGG 0.578214 4:-66835286 MsG0480021987.01.T01:CDS
CCCGGGGATTGTCTCAGAGG+TGG 0.578255 4:-66836491 MsG0480021987.01.T01:CDS
TCTAGAGTATCAGTCAAAGA+GGG 0.581200 4:-66835756 MsG0480021987.01.T01:CDS
TATCGTTGAAGTGAAGCCCC+AGG 0.581315 4:-66833784 MsG0480021987.01.T01:intron
GCATTGCAGGATGTGAGCAA+AGG 0.581846 4:-66832753 MsG0480021987.01.T01:intron
CATGCCTGTTGGGATTCACA+TGG 0.583402 4:-66835687 MsG0480021987.01.T01:CDS
GTCGGATTGAATCTGTTATG+AGG 0.584194 4:-66835664 MsG0480021987.01.T01:CDS
CAGTCAAGTTTGGATTCAAG+AGG 0.585127 4:+66832443 None:intergenic
AATATTCTTTGCGACAATTG+GGG 0.592899 4:-66832367 MsG0480021987.01.T01:three_prime_UTR
TGGTTCCAGTATTGAACGAA+AGG 0.595735 4:-66833934 MsG0480021987.01.T01:CDS
CTATGGTTTCAGCTTACAAG+AGG 0.596832 4:-66834854 MsG0480021987.01.T01:CDS
AGAAAAGAGAGGACAACAAA+GGG 0.596911 4:-66836372 MsG0480021987.01.T01:CDS
AAGAAAAGAGAGGACAACAA+AGG 0.597247 4:-66836373 MsG0480021987.01.T01:CDS
GTCTAGAGTATCAGTCAAAG+AGG 0.599688 4:-66835757 MsG0480021987.01.T01:CDS
AGAAGATCCAAAACCAAGGT+CGG 0.600676 4:+66833881 None:intergenic
ATTTCCCAGCAATGGGATCG+GGG 0.601478 4:-66836564 MsG0480021987.01.T01:CDS
CAACATTCCATGGATTGACA+CGG 0.605906 4:+66835120 None:intergenic
CTATATACAGAGGCAACTGA+TGG 0.609983 4:-66833954 MsG0480021987.01.T01:CDS
CGGATAGCCCCACTAAGCGA+TGG 0.610821 4:+66835140 None:intergenic
TAATAAGAGTCCAAGCAAAG+AGG 0.616472 4:-66834772 MsG0480021987.01.T01:CDS
TGTCCCGGGGATTGTCTCAG+AGG 0.616643 4:-66836494 MsG0480021987.01.T01:CDS
GTATCCCTTTACCTCTAGCA+GGG 0.618579 4:+66835459 None:intergenic
TGACAATAACACACTCAGCA+AGG 0.622584 4:+66835303 None:intergenic
GGATGAGGAGTGTAAGGCAA+GGG 0.623073 4:-66835636 MsG0480021987.01.T01:CDS
CAGATAGTTAACCCTGCTAG+AGG 0.623112 4:-66835470 MsG0480021987.01.T01:CDS
TAGTTAGTAGTGCAATCTCA+AGG 0.623819 4:-66832626 MsG0480021987.01.T01:CDS
CAGAACATGGATACTTCTTG+AGG 0.624436 4:-66834629 MsG0480021987.01.T01:intron
AAACAACACCCCAAATGGCA+AGG 0.628534 4:-66835509 MsG0480021987.01.T01:CDS
TTTCTTGCAAGACATGGAGA+GGG 0.628667 4:-66834979 MsG0480021987.01.T01:CDS
GACGGTGAATGGGAAACTTG+TGG 0.631275 4:-66834026 MsG0480021987.01.T01:CDS
GTGATGGAGAGAAGCAGTTG+CGG 0.631761 4:-66835058 MsG0480021987.01.T01:CDS
GTGTTCTCCATCGCTTAGTG+GGG 0.632837 4:-66835147 MsG0480021987.01.T01:CDS
GTATGTCAGCACTCATGACG+TGG 0.632870 4:-66835018 MsG0480021987.01.T01:CDS
ATCTGTCATCACCAACACAC+AGG 0.635325 4:+66832670 None:intergenic
TGGATTTCCAGAAGATATGG+AGG 0.636676 4:-66836302 MsG0480021987.01.T01:CDS
TAGGACTCTTCCTGTTAGGG+AGG 0.637903 4:-66835873 MsG0480021987.01.T01:CDS
AAAGAGAGGACAACAAAGGG+TGG 0.638553 4:-66836369 MsG0480021987.01.T01:CDS
CGGATGAGGAGTGTAAGGCA+AGG 0.638820 4:-66835637 MsG0480021987.01.T01:CDS
TTTGAAAGCTAAGAAAAGAG+AGG 0.639677 4:-66836383 MsG0480021987.01.T01:CDS
GTTTCTTGCAAGACATGGAG+AGG 0.640852 4:-66834980 MsG0480021987.01.T01:CDS
AAGTTTGCCAAAACATCAGG+AGG 0.642149 4:+66836178 None:intergenic
ATGCCTGTTGGGATTCACAT+GGG 0.644963 4:-66835686 MsG0480021987.01.T01:CDS
GGTAGTTGAAATAATAAACC+CGG 0.646249 4:-66836020 MsG0480021987.01.T01:CDS
AACACAATAGGTTCATAACC+AGG 0.652850 4:+66835371 None:intergenic
CATCAGGAGGCAGAAAAGTG+GGG 0.652893 4:+66836191 None:intergenic
GAATGTTGAAGCAACTGCGG+AGG 0.653258 4:-66835105 MsG0480021987.01.T01:CDS
TGATACATCATCTTGTTCAG+CGG 0.658366 4:+66836243 None:intergenic
ATATCTCCGATGATGGAAAG+GGG 0.659124 4:+66835897 None:intergenic
CCACCTCTGAGACAATCCCC+GGG 0.659546 4:+66836491 None:intergenic
TGTTATTGTCACAGCTGTAA+GGG 0.659939 4:-66835291 MsG0480021987.01.T01:CDS
TGAATCTGTTATGAGGATGT+CGG 0.662042 4:-66835657 MsG0480021987.01.T01:CDS
ACAAATGGCGATCAAAGCGG+TGG 0.668272 4:+66836083 None:intergenic
ACCATGCATAGAAGAATCTG+GGG 0.671869 4:-66832469 MsG0480021987.01.T01:CDS
TATGGTTTCAGCTTACAAGA+GGG 0.681078 4:-66834853 MsG0480021987.01.T01:CDS
TGTAATGAAACTATATACAG+AGG 0.682097 4:-66833964 MsG0480021987.01.T01:CDS
GGAGGGAGTTTAAAGAACGA+AGG 0.685276 4:-66836537 MsG0480021987.01.T01:CDS
CTAGAGTATCAGTCAAAGAG+GGG 0.688713 4:-66835755 MsG0480021987.01.T01:CDS
ATGGAATGTTGAAGCAACTG+CGG 0.690516 4:-66835108 MsG0480021987.01.T01:CDS
TAGGATTGGAATATTACGGG+AGG 0.692571 4:-66835727 MsG0480021987.01.T01:CDS
CGAGGGTTATGAGTGTCCCG+GGG 0.699920 4:-66836507 MsG0480021987.01.T01:CDS
GGGAGTTTAAAGAACGAAGG+CGG 0.701696 4:-66836534 MsG0480021987.01.T01:CDS
CCCACAAATGGCGATCAAAG+CGG 0.706904 4:+66836080 None:intergenic
TGGTGATGACAGATCAGATG+AGG 0.713489 4:-66832661 MsG0480021987.01.T01:CDS
TGTGAGCAAAGGCTTAGTTG+CGG 0.713566 4:-66832742 MsG0480021987.01.T01:CDS
CCTGAGAAGATCCAAAACCA+AGG 0.716480 4:+66833877 None:intergenic
AGTTGAAATAATAAACCCGG+AGG 0.724497 4:-66836017 MsG0480021987.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATGTGAAAATAATATTTT+AGG - Chr4:66835356-66835375 MsG0480021987.01.T01:CDS 10.0%
!! TATTGAATGAAATATAAAAG+TGG + Chr4:66832468-66832487 None:intergenic 15.0%
!! TTAAAATTGAAAACAGAAAA+TGG + Chr4:66836309-66836328 None:intergenic 15.0%
!! TTGTAATATCAGAATTTATT+GGG - Chr4:66834722-66834741 MsG0480021987.01.T01:CDS 15.0%
!!! AAATTTCTGTTCTAATTTTT+TGG - Chr4:66836888-66836907 MsG0480021987.01.T01:intron 15.0%
!!! AACTTTTTAAAATGAAAACA+AGG + Chr4:66836346-66836365 None:intergenic 15.0%
!!! GTAAAAATTGAAACTTTTAT+TGG - Chr4:66832909-66832928 MsG0480021987.01.T01:intron 15.0%
!!! TTGTTTTTACCATATAATTT+TGG - Chr4:66837031-66837050 MsG0480021987.01.T01:intron 15.0%
!! AATAAATATGCTAGAATCTT+TGG - Chr4:66837380-66837399 MsG0480021987.01.T01:intron 20.0%
!! CTACAAACAATATATTCATA+AGG + Chr4:66834643-66834662 None:intergenic 20.0%
!! CTTGTAATATCAGAATTTAT+TGG - Chr4:66834721-66834740 MsG0480021987.01.T01:CDS 20.0%
!! GATAAACAAAGAAAATGAAA+AGG + Chr4:66837577-66837596 None:intergenic 20.0%
!! TAAATTGAAATTCATGTGTA+TGG - Chr4:66835543-66835562 MsG0480021987.01.T01:CDS 20.0%
!! TTACTAAATTCTGATATCAT+TGG - Chr4:66834055-66834074 MsG0480021987.01.T01:intron 20.0%
!!! AAATCAAATTGCTATTTAAC+AGG + Chr4:66836514-66836533 None:intergenic 20.0%
!!! AACAATGAAAACAACATTTT+TGG + Chr4:66835178-66835197 None:intergenic 20.0%
!!! ACAATGAAAACAACATTTTT+GGG + Chr4:66835177-66835196 None:intergenic 20.0%
!!! GTTCTCTTCTTTTTATAATT+TGG - Chr4:66835802-66835821 MsG0480021987.01.T01:CDS 20.0%
!!! TGGAACATTTTCTTATTAAA+TGG + Chr4:66836801-66836820 None:intergenic 20.0%
!!! TTCATTCTTTTGTATCAAAA+GGG - Chr4:66832704-66832723 MsG0480021987.01.T01:CDS 20.0%
!!! TTGTGATTTAAAATTCCTAT+CGG - Chr4:66832264-66832283 MsG0480021987.01.T01:three_prime_UTR 20.0%
!!! TTTCATTCTTTTGTATCAAA+AGG - Chr4:66832703-66832722 MsG0480021987.01.T01:CDS 20.0%
!!! TTTTTTTTTTCTTTCTACCA+TGG - Chr4:66836775-66836794 MsG0480021987.01.T01:intron 20.0%
! AAAAAAACATCACCTAAATC+AGG + Chr4:66837482-66837501 None:intergenic 25.0%
! AAATTAGAACAGAAATTTGC+AGG + Chr4:66836886-66836905 None:intergenic 25.0%
! AACCGAAAAAAGAAAAAACT+AGG + Chr4:66832590-66832609 None:intergenic 25.0%
! AACTTTCTTCTATTTCAGAA+TGG + Chr4:66834471-66834490 None:intergenic 25.0%
! AATATGTACAGAAATCCAAA+AGG - Chr4:66836455-66836474 MsG0480021987.01.T01:CDS 25.0%
! ACCGAAAAAAGAAAAAACTA+GGG + Chr4:66832589-66832608 None:intergenic 25.0%
! AGATAATACTTTGCTTTACT+TGG + Chr4:66837342-66837361 None:intergenic 25.0%
! AGCTTAGATAGCAATATTAA+GGG - Chr4:66836271-66836290 MsG0480021987.01.T01:CDS 25.0%
! AGGTATAAATTTGAAGATTC+TGG - Chr4:66834342-66834361 MsG0480021987.01.T01:intron 25.0%
! ATATCAAGAAAGAGAACATT+TGG + Chr4:66835770-66835789 None:intergenic 25.0%
! CAATATATTCATAAGGAGTT+AGG + Chr4:66834636-66834655 None:intergenic 25.0%
! GAATATATTGTTTGTAGACA+GGG - Chr4:66834646-66834665 MsG0480021987.01.T01:CDS 25.0%
! GTGTTAAAGCCAAAATTATA+TGG + Chr4:66837043-66837062 None:intergenic 25.0%
! TAATATTCTTTGCGACAATT+GGG - Chr4:66837523-66837542 MsG0480021987.01.T01:intron 25.0%
! TAGAGAAATTGTATATACCT+GGG + Chr4:66836127-66836146 None:intergenic 25.0%
! TATCAAGAAAGAGAACATTT+GGG + Chr4:66835769-66835788 None:intergenic 25.0%
! TATTGTGTTTATTGACAGAT+CGG - Chr4:66834534-66834553 MsG0480021987.01.T01:intron 25.0%
! TCAAAGTTAACAATAGGAAA+TGG + Chr4:66836388-66836407 None:intergenic 25.0%
! TCTGTATATAGTTTCATTAC+AGG + Chr4:66835928-66835947 None:intergenic 25.0%
! TGAATATATTGTTTGTAGAC+AGG - Chr4:66834645-66834664 MsG0480021987.01.T01:CDS 25.0%
! TGTAATGAAACTATATACAG+AGG - Chr4:66835927-66835946 MsG0480021987.01.T01:CDS 25.0%
! TGTTATATCTTACGTAAAGT+TGG + Chr4:66836736-66836755 None:intergenic 25.0%
! TTATAAAAAGAAGAGAACAC+AGG + Chr4:66835800-66835819 None:intergenic 25.0%
!! AAAGGGAAAATTGAACTTTT+AGG - Chr4:66832721-66832740 MsG0480021987.01.T01:CDS 25.0%
!! AAGTAAAGCAAAGTATTATC+TGG - Chr4:66837341-66837360 MsG0480021987.01.T01:intron 25.0%
!! ATTTTCTTATTAAATGGCCA+TGG + Chr4:66836795-66836814 None:intergenic 25.0%
!! CAATGAAAACAACATTTTTG+GGG + Chr4:66835176-66835195 None:intergenic 25.0%
!! CTGTTTTCAAAGTTAACAAT+AGG + Chr4:66836394-66836413 None:intergenic 25.0%
!! GTATACAAACCTTTTAGATT+TGG - Chr4:66833295-66833314 MsG0480021987.01.T01:intron 25.0%
!! TAACAATTTGAGCATTTTTC+AGG - Chr4:66835833-66835852 MsG0480021987.01.T01:CDS 25.0%
!! TATCTAGGATTGGAATATTA+CGG - Chr4:66834160-66834179 MsG0480021987.01.T01:intron 25.0%
!!! AAAGTGTTTTAAAGTCCAAT+TGG - Chr4:66835502-66835521 MsG0480021987.01.T01:CDS 25.0%
!!! AATGTTGTTTTCATTGTTAG+TGG - Chr4:66835180-66835199 MsG0480021987.01.T01:CDS 25.0%
!!! ACCCTAGTTTTTTCTTTTTT+CGG - Chr4:66832585-66832604 MsG0480021987.01.T01:CDS 25.0%
!!! AGTTTTTTAGAGAAGCTTTT+TGG - Chr4:66836961-66836980 MsG0480021987.01.T01:intron 25.0%
!!! ATTGAGAGCTTTTTAAAGTT+AGG + Chr4:66835012-66835031 None:intergenic 25.0%
!!! GTTTTAGGTGTATAGAATTT+GGG - Chr4:66832869-66832888 MsG0480021987.01.T01:intron 25.0%
!!! TAGCTTTAGATAACATTGTT+AGG + Chr4:66836683-66836702 None:intergenic 25.0%
!!! TGAGTGTGTTTTTTTTTTGT+TGG - Chr4:66833134-66833153 MsG0480021987.01.T01:intron 25.0%
!!! TTGAGAGCTTTTTAAAGTTA+GGG + Chr4:66835011-66835030 None:intergenic 25.0%
!!! TTTTAGGTGTATAGAATTTG+GGG - Chr4:66832870-66832889 MsG0480021987.01.T01:intron 25.0%
AAAAACCATTAATCACCAAC+AGG + Chr4:66833182-66833201 None:intergenic 30.0%
AAATTGAAAACTGACCTTGT+TGG + Chr4:66832686-66832705 None:intergenic 30.0%
AATATTCTTTGCGACAATTG+GGG - Chr4:66837524-66837543 MsG0480021987.01.T01:intron 30.0%
ACAGCATCATTTATGTCTAA+AGG + Chr4:66836935-66836954 None:intergenic 30.0%
ACCTTCTTAGAAAAAGATGT+TGG - Chr4:66834944-66834963 MsG0480021987.01.T01:CDS 30.0%
AGACAAGGATAAAATAGATC+AGG + Chr4:66836843-66836862 None:intergenic 30.0%
AGAGAAAGAAAGAGAAAGAA+GGG - Chr4:66832538-66832557 MsG0480021987.01.T01:CDS 30.0%
AGAGAAATTGTATATACCTG+GGG + Chr4:66836126-66836145 None:intergenic 30.0%
AGTATACATGAACAAATACC+AGG + Chr4:66832833-66832852 None:intergenic 30.0%
CAAACAATATATCACTCAAC+AGG + Chr4:66835664-66835683 None:intergenic 30.0%
CCTTCTTAGAAAAAGATGTT+GGG - Chr4:66834945-66834964 MsG0480021987.01.T01:CDS 30.0%
CTTCTTAGAAAAAGATGTTG+GGG - Chr4:66834946-66834965 MsG0480021987.01.T01:CDS 30.0%
GAGCTTAGATAGCAATATTA+AGG - Chr4:66836270-66836289 MsG0480021987.01.T01:CDS 30.0%
GATAAAATAGATCAGGTTCT+TGG + Chr4:66836836-66836855 None:intergenic 30.0%
GATCTGTCAATAAACACAAT+AGG + Chr4:66834535-66834554 None:intergenic 30.0%
GGTAGTTGAAATAATAAACC+CGG - Chr4:66833871-66833890 MsG0480021987.01.T01:CDS 30.0%
GTAATATTCTTTGCGACAAT+TGG - Chr4:66837522-66837541 MsG0480021987.01.T01:intron 30.0%
GTAGAGAAATTGTATATACC+TGG + Chr4:66836128-66836147 None:intergenic 30.0%
TAAAAGGTTTGTATACGATC+TGG + Chr4:66833291-66833310 None:intergenic 30.0%
TAAAAGTTTGCCAAAACATC+AGG + Chr4:66833719-66833738 None:intergenic 30.0%
TAAAGCATACACTATCCAAT+TGG + Chr4:66835520-66835539 None:intergenic 30.0%
TACAGTACAAGTTCATAGTA+TGG + Chr4:66835387-66835406 None:intergenic 30.0%
TTATCTAATGTTTCGTACAG+TGG + Chr4:66832323-66832342 None:intergenic 30.0%
TTTACTCCCTGTAAAAAACT+TGG - Chr4:66835231-66835250 MsG0480021987.01.T01:CDS 30.0%
TTTATGTCTAAAGGAACAAC+AGG + Chr4:66836926-66836945 None:intergenic 30.0%
TTTGAAAGCTAAGAAAAGAG+AGG - Chr4:66833508-66833527 MsG0480021987.01.T01:intron 30.0%
TTTGCTTGGACTCTTATTAA+TGG + Chr4:66835118-66835137 None:intergenic 30.0%
! AAATTTGAAGATTCTGGCTA+TGG - Chr4:66834348-66834367 MsG0480021987.01.T01:intron 30.0%
! ATCTAGGATTGGAATATTAC+GGG - Chr4:66834161-66834180 MsG0480021987.01.T01:intron 30.0%
! ATGAATCATCATTTTCCCAA+AGG + Chr4:66837106-66837125 None:intergenic 30.0%
! ATTGTGATGTAACTCGTTTT+AGG - Chr4:66832854-66832873 MsG0480021987.01.T01:intron 30.0%
! CAATGTTATCTAAAGCTAGT+AGG - Chr4:66836685-66836704 MsG0480021987.01.T01:intron 30.0%
! CTCTTATTAATGGAGTTTTG+TGG + Chr4:66835108-66835127 None:intergenic 30.0%
! GACGATATGGACATTTTTAA+AGG - Chr4:66834322-66834341 MsG0480021987.01.T01:intron 30.0%
! GATCTATTTTATCCTTGTCT+TGG - Chr4:66836843-66836862 MsG0480021987.01.T01:intron 30.0%
! GGTAACTTGTAATGAAAAAG+TGG + Chr4:66833770-66833789 None:intergenic 30.0%
! GTAATGATGTATCTGCATTT+TGG - Chr4:66832953-66832972 MsG0480021987.01.T01:intron 30.0%
! TGAATCATCATTTTCCCAAA+GGG + Chr4:66837105-66837124 None:intergenic 30.0%
! TGGCTTTTATCAGTTGAAAA+CGG + Chr4:66833791-66833810 None:intergenic 30.0%
! TTGTTTTCATTGTTAGTGGA+CGG - Chr4:66835184-66835203 MsG0480021987.01.T01:CDS 30.0%
!! CGAAGTCATTTTATAGGAAA+TGG + Chr4:66836601-66836620 None:intergenic 30.0%
!! CGTTTTAACAGGGTTAAAAT+GGG - Chr4:66833956-66833975 MsG0480021987.01.T01:CDS 30.0%
!! CGTTTTAGGTGTATAGAATT+TGG - Chr4:66832868-66832887 MsG0480021987.01.T01:intron 30.0%
!! GGTTTTCGAAGTCATTTTAT+AGG + Chr4:66836607-66836626 None:intergenic 30.0%
!! GTTTTGGCAAACTTTTATGA+TGG - Chr4:66833722-66833741 MsG0480021987.01.T01:intron 30.0%
!! TCTCTTTTCTTAGCTTTCAA+AGG + Chr4:66833509-66833528 None:intergenic 30.0%
!! TTCTTTGCTATTACAGCTTA+AGG - Chr4:66833565-66833584 MsG0480021987.01.T01:intron 30.0%
!!! AGAACTGTGTATTTTTTGGA+AGG - Chr4:66833250-66833269 MsG0480021987.01.T01:intron 30.0%
!!! AGATCATCTAGAAAGTGTTT+TGG - Chr4:66836050-66836069 MsG0480021987.01.T01:CDS 30.0%
!!! AGCAATTCCAAGTTTTTTAC+AGG + Chr4:66835241-66835260 None:intergenic 30.0%
!!! GCAATTCCAAGTTTTTTACA+GGG + Chr4:66835240-66835259 None:intergenic 30.0%
!!! TAGGCAACTTTTTCAGTAAT+TGG + Chr4:66834562-66834581 None:intergenic 30.0%
!!! TATGATTGTTTTTGTCCTGT+TGG - Chr4:66833164-66833183 MsG0480021987.01.T01:intron 30.0%
AAACAAGCTGTTCTTTCAGA+AGG - Chr4:66833850-66833869 MsG0480021987.01.T01:CDS 35.0%
AAACGCCTTCTTAGAAAAGT+TGG + Chr4:66833941-66833960 None:intergenic 35.0%
AAAGCTCTCAATTGATGCTA+TGG - Chr4:66835020-66835039 MsG0480021987.01.T01:CDS 35.0%
AAATAGAAGAAAGTTGCAGC+AGG - Chr4:66834476-66834495 MsG0480021987.01.T01:intron 35.0%
AACACAATAGGTTCATAACC+AGG + Chr4:66834523-66834542 None:intergenic 35.0%
AAGAAAAGAGAGGACAACAA+AGG - Chr4:66833518-66833537 MsG0480021987.01.T01:intron 35.0%
AAGCCTGTGATAACAGAAAA+TGG - Chr4:66836424-66836443 MsG0480021987.01.T01:CDS 35.0%
AATAACTTCCTTTCATCCCT+AGG - Chr4:66835451-66835470 MsG0480021987.01.T01:CDS 35.0%
AATGACTGAAAGTGACAAAC+AGG - Chr4:66837188-66837207 MsG0480021987.01.T01:intron 35.0%
AATGTCAGATATCCAAGACA+AGG + Chr4:66836858-66836877 None:intergenic 35.0%
ACCATCATAGTCCAACAAAA+TGG + Chr4:66835076-66835095 None:intergenic 35.0%
ACCCAAATATAATCATCCTC+CGG + Chr4:66833893-66833912 None:intergenic 35.0%
ACTTTCCTTTCGTTCAATAC+TGG + Chr4:66835965-66835984 None:intergenic 35.0%
AGAAAAAGATGTTGGGGAAT+AGG - Chr4:66834952-66834971 MsG0480021987.01.T01:CDS 35.0%
AGAAAAGAGAGGACAACAAA+GGG - Chr4:66833519-66833538 MsG0480021987.01.T01:intron 35.0%
AGCCTGTGATAACAGAAAAT+GGG - Chr4:66836425-66836444 MsG0480021987.01.T01:CDS 35.0%
AGTATTAAGATCATGCCTGT+TGG - Chr4:66834193-66834212 MsG0480021987.01.T01:intron 35.0%
AGTTGAAATAATAAACCCGG+AGG - Chr4:66833874-66833893 MsG0480021987.01.T01:CDS 35.0%
ATATAGGACTCTTCCTGTTA+GGG - Chr4:66834015-66834034 MsG0480021987.01.T01:CDS 35.0%
ATCGTCAATACCAAGCAAAA+TGG + Chr4:66834308-66834327 None:intergenic 35.0%
ATTACAAGCATGCTCTTCTT+TGG + Chr4:66834709-66834728 None:intergenic 35.0%
CGATCAGAAGAAATAGTTGA+CGG + Chr4:66833461-66833480 None:intergenic 35.0%
CTGCATTCAGACAAGAAAAA+TGG + Chr4:66835423-66835442 None:intergenic 35.0%
GAAAATGTTCCATCTAACCA+TGG - Chr4:66836809-66836828 MsG0480021987.01.T01:intron 35.0%
GAGAGAAAGAAAGAGAAAGA+AGG - Chr4:66832537-66832556 MsG0480021987.01.T01:CDS 35.0%
GGTTCATGATTACCATTTGA+TGG - Chr4:66833910-66833929 MsG0480021987.01.T01:CDS 35.0%
GTAAAAACAAACTGCTATGC+TGG + Chr4:66837021-66837040 None:intergenic 35.0%
GTATTAAGATCATGCCTGTT+GGG - Chr4:66834194-66834213 MsG0480021987.01.T01:intron 35.0%
TAATAAGAGTCCAAGCAAAG+AGG - Chr4:66835119-66835138 MsG0480021987.01.T01:CDS 35.0%
TAGTTAGTAGTGCAATCTCA+AGG - Chr4:66837265-66837284 MsG0480021987.01.T01:intron 35.0%
TATATAGGACTCTTCCTGTT+AGG - Chr4:66834014-66834033 MsG0480021987.01.T01:CDS 35.0%
TATGGTTTCAGCTTACAAGA+GGG - Chr4:66835038-66835057 MsG0480021987.01.T01:CDS 35.0%
TCTTATACCATTTGCATTGC+AGG - Chr4:66837125-66837144 MsG0480021987.01.T01:intron 35.0%
TGAATCTGTTATGAGGATGT+CGG - Chr4:66834234-66834253 MsG0480021987.01.T01:intron 35.0%
TGAGAACATCAGTTGTCTTA+TGG - Chr4:66835617-66835636 MsG0480021987.01.T01:CDS 35.0%
TGATACATCATCTTGTTCAG+CGG + Chr4:66833651-66833670 None:intergenic 35.0%
TGATGTATCACAGTATTTGC+TGG - Chr4:66833661-66833680 MsG0480021987.01.T01:intron 35.0%
TGGATTGAAGCAATGGTTAT+TGG + Chr4:66832666-66832685 None:intergenic 35.0%
TGTTATTGTCACAGCTGTAA+GGG - Chr4:66834600-66834619 MsG0480021987.01.T01:intron 35.0%
TTACAAGCATGCTCTTCTTT+GGG + Chr4:66834708-66834727 None:intergenic 35.0%
TTCCATCATCGGAGATATAT+AGG - Chr4:66833999-66834018 MsG0480021987.01.T01:CDS 35.0%
TTTATGATGGCTTCTGCAAA+AGG - Chr4:66833735-66833754 MsG0480021987.01.T01:intron 35.0%
! AACTTGCTTTCACCATGTTT+CGG + Chr4:66836629-66836648 None:intergenic 35.0%
! AGAGAATGTGTACGTTTTGT+TGG - Chr4:66833069-66833088 MsG0480021987.01.T01:intron 35.0%
! AGCAATATTAAGGGCATGAT+TGG - Chr4:66836280-66836299 MsG0480021987.01.T01:CDS 35.0%
! CAAAGAGGTCATATCTCTTT+TGG - Chr4:66835134-66835153 MsG0480021987.01.T01:CDS 35.0%
! GAAGGAAAAACCATTTTGCT+TGG - Chr4:66834295-66834314 MsG0480021987.01.T01:intron 35.0%
! GAATCATCATTTTCCCAAAG+GGG + Chr4:66837104-66837123 None:intergenic 35.0%
! GTAATTGCTCTGATTTTGGA+TGG - Chr4:66835887-66835906 MsG0480021987.01.T01:CDS 35.0%
! TCTAGAGTATCAGTCAAAGA+GGG - Chr4:66834135-66834154 MsG0480021987.01.T01:intron 35.0%
! TGTGGTAATTGCTCTGATTT+TGG - Chr4:66835883-66835902 MsG0480021987.01.T01:CDS 35.0%
! TTCCCATTTTCTGTTATCAC+AGG + Chr4:66836430-66836449 None:intergenic 35.0%
! TTGCTATTACAGCTTAAGGA+TGG - Chr4:66833569-66833588 MsG0480021987.01.T01:intron 35.0%
!! AACCTTTTAGATTTGGCTTC+TGG - Chr4:66833302-66833321 MsG0480021987.01.T01:intron 35.0%
!! ACCTTTTAGATTTGGCTTCT+GGG - Chr4:66833303-66833322 MsG0480021987.01.T01:intron 35.0%
!! ATATATCTCCGATGATGGAA+AGG + Chr4:66833999-66834018 None:intergenic 35.0%
!! CCCAACATCTTTTTCTAAGA+AGG + Chr4:66834948-66834967 None:intergenic 35.0%
!! CTAAAATGCATTCTGGAGTT+TGG - Chr4:66836220-66836239 MsG0480021987.01.T01:CDS 35.0%
!! CTCCAGAATGCATTTTAGAA+AGG + Chr4:66836218-66836237 None:intergenic 35.0%
!! GCGTTTTAACAGGGTTAAAA+TGG - Chr4:66833955-66833974 MsG0480021987.01.T01:CDS 35.0%
!! GTCCTTTCTAAAATGCATTC+TGG - Chr4:66836213-66836232 MsG0480021987.01.T01:CDS 35.0%
!! TAGCTTTGGATTTAGAGTTG+TGG - Chr4:66834978-66834997 MsG0480021987.01.T01:CDS 35.0%
!! TATATCTCCGATGATGGAAA+GGG + Chr4:66833998-66834017 None:intergenic 35.0%
!! TGTTTTCATTGTTAGTGGAC+GGG - Chr4:66835185-66835204 MsG0480021987.01.T01:CDS 35.0%
!! TTTGCTTGGTATTGACGATA+TGG - Chr4:66834309-66834328 MsG0480021987.01.T01:intron 35.0%
!! TTTGTCCTGTTGGTGATTAA+TGG - Chr4:66833174-66833193 MsG0480021987.01.T01:intron 35.0%
!!! CAATTTGAGCATTTTTCAGG+TGG - Chr4:66835836-66835855 MsG0480021987.01.T01:CDS 35.0%
!!! GTGGAGAACTGTGTATTTTT+TGG - Chr4:66833246-66833265 MsG0480021987.01.T01:intron 35.0%
!!! GTTTAATGCGTTTTTTTGCC+TGG - Chr4:66832812-66832831 MsG0480021987.01.T01:intron 35.0%
!!! TCTAAGAAGGCGTTTTAACA+GGG - Chr4:66833946-66833965 MsG0480021987.01.T01:CDS 35.0%
!!! TTCTAAGAAGGCGTTTTAAC+AGG - Chr4:66833945-66833964 MsG0480021987.01.T01:CDS 35.0%
AAGTTTGCCAAAACATCAGG+AGG + Chr4:66833716-66833735 None:intergenic 40.0%
AATAGCTCTTGTTCAGACCT+AGG + Chr4:66835471-66835490 None:intergenic 40.0%
ACAACTGATGTTCTCAACTC+TGG + Chr4:66835613-66835632 None:intergenic 40.0%
ACCATGCATAGAAGAATCTG+GGG - Chr4:66837422-66837441 MsG0480021987.01.T01:intron 40.0%
ACCATTGCTTCAATCCAACA+AGG - Chr4:66832669-66832688 MsG0480021987.01.T01:CDS 40.0%
ACCCGGAGGATGATTATATT+TGG - Chr4:66833888-66833907 MsG0480021987.01.T01:CDS 40.0%
ACCTTGTTGGATTGAAGCAA+TGG + Chr4:66832673-66832692 None:intergenic 40.0%
ACGTAGTTTCTTGCAAGACA+TGG - Chr4:66834906-66834925 MsG0480021987.01.T01:CDS 40.0%
ACTGAGGTTTCTCCTGATTT+AGG - Chr4:66837467-66837486 MsG0480021987.01.T01:intron 40.0%
ACTTGCTTTCACCATGTTTC+GGG + Chr4:66836628-66836647 None:intergenic 40.0%
AGAAATCCAAAAGGTCCCTA+GGG - Chr4:66836464-66836483 MsG0480021987.01.T01:CDS 40.0%
AGAAGATCCAAAACCAAGGT+CGG + Chr4:66836013-66836032 None:intergenic 40.0%
AGAGATATGACCTCTTTGCT+TGG + Chr4:66835132-66835151 None:intergenic 40.0%
ATAGCTCTTGTTCAGACCTA+GGG + Chr4:66835470-66835489 None:intergenic 40.0%
ATGGAATGTTGAAGCAACTG+CGG - Chr4:66834783-66834802 MsG0480021987.01.T01:CDS 40.0%
ATGTCTAAAGGAACAACAGG+AGG + Chr4:66836923-66836942 None:intergenic 40.0%
ATGTTGAAGAGCTTACGTCA+CGG + Chr4:66832291-66832310 None:intergenic 40.0%
CAACAAATTCCCGACAACTA+AGG + Chr4:66836712-66836731 None:intergenic 40.0%
CACCATGCATAGAAGAATCT+GGG - Chr4:66837421-66837440 MsG0480021987.01.T01:intron 40.0%
CAGAACATGGATACTTCTTG+AGG - Chr4:66835262-66835281 MsG0480021987.01.T01:CDS 40.0%
CAGTAGCAGATTGAGATTGA+AGG + Chr4:66832640-66832659 None:intergenic 40.0%
CAGTCAAGTTTGGATTCAAG+AGG + Chr4:66837451-66837470 None:intergenic 40.0%
CCCAAATATAATCATCCTCC+GGG + Chr4:66833892-66833911 None:intergenic 40.0%
CCCGGAGGATGATTATATTT+GGG - Chr4:66833889-66833908 MsG0480021987.01.T01:CDS 40.0%
CTATATACAGAGGCAACTGA+TGG - Chr4:66835937-66835956 MsG0480021987.01.T01:CDS 40.0%
CTATGGTTTCAGCTTACAAG+AGG - Chr4:66835037-66835056 MsG0480021987.01.T01:CDS 40.0%
CTCTCCATCACTCATTGAAA+TGG + Chr4:66834824-66834843 None:intergenic 40.0%
CTGAACAAGAGCTATTACGT+GGG - Chr4:66835475-66835494 MsG0480021987.01.T01:CDS 40.0%
CTTGAATCCAAACTTGACTG+AGG - Chr4:66837451-66837470 MsG0480021987.01.T01:intron 40.0%
GAAACATGGTGAAAGCAAGT+TGG - Chr4:66836628-66836647 MsG0480021987.01.T01:CDS 40.0%
GAAGCCATTTCAATGAGTGA+TGG - Chr4:66834817-66834836 MsG0480021987.01.T01:CDS 40.0%
GACGAGCATAATCGAAAGTA+TGG + Chr4:66834084-66834103 None:intergenic 40.0%
GAGCTCAAACAGCAATTTGA+AGG - Chr4:66834277-66834296 MsG0480021987.01.T01:intron 40.0%
GATAAACTGACCACTCTTTG+CGG + Chr4:66836091-66836110 None:intergenic 40.0%
GATACATCATCTTGTTCAGC+GGG + Chr4:66833650-66833669 None:intergenic 40.0%
GATATGGAGGTTCTGTATGT+TGG - Chr4:66833602-66833621 MsG0480021987.01.T01:intron 40.0%
GATCAATGCAGATCCATACA+TGG + Chr4:66835712-66835731 None:intergenic 40.0%
GCTTCTGCAAAAGGCAATTA+TGG - Chr4:66833744-66833763 MsG0480021987.01.T01:intron 40.0%
GTAGGGATAGCTTAAGTGAA+TGG - Chr4:66835208-66835227 MsG0480021987.01.T01:CDS 40.0%
GTCCTATATATCTCCGATGA+TGG + Chr4:66834004-66834023 None:intergenic 40.0%
GTCGGATTGAATCTGTTATG+AGG - Chr4:66834227-66834246 MsG0480021987.01.T01:intron 40.0%
GTGATCGTTTGTTTCCAGAA+GGG - Chr4:66832982-66833001 MsG0480021987.01.T01:intron 40.0%
GTTTGTAGACAGGGAATATC+TGG - Chr4:66834655-66834674 MsG0480021987.01.T01:CDS 40.0%
TACAGAACCTCCATATCTTC+TGG + Chr4:66833599-66833618 None:intergenic 40.0%
TAGGATTGGAATATTACGGG+AGG - Chr4:66834164-66834183 MsG0480021987.01.T01:intron 40.0%
TATTGTGCTACAACCCCTTT+GGG - Chr4:66837088-66837107 MsG0480021987.01.T01:intron 40.0%
TCACCATGCATAGAAGAATC+TGG - Chr4:66837420-66837439 MsG0480021987.01.T01:intron 40.0%
TCAGGCAGTAAGTGTTTCTT+CGG - Chr4:66833430-66833449 MsG0480021987.01.T01:intron 40.0%
TCCCAGAAGCCAAATCTAAA+AGG + Chr4:66833307-66833326 None:intergenic 40.0%
TCTGAACAAGAGCTATTACG+TGG - Chr4:66835474-66835493 MsG0480021987.01.T01:CDS 40.0%
TGAACAAGAGCTATTACGTG+GGG - Chr4:66835476-66835495 MsG0480021987.01.T01:CDS 40.0%
TGACAATAACACACTCAGCA+AGG + Chr4:66834591-66834610 None:intergenic 40.0%
TGCTTCTGTATTTGCTTGCA+CGG - Chr4:66837305-66837324 MsG0480021987.01.T01:intron 40.0%
TGGATTTCCAGAAGATATGG+AGG - Chr4:66833589-66833608 MsG0480021987.01.T01:intron 40.0%
TGTGATCGTTTGTTTCCAGA+AGG - Chr4:66832981-66833000 MsG0480021987.01.T01:intron 40.0%
TTAACCCTGCTAGAGGTAAA+GGG - Chr4:66834428-66834447 MsG0480021987.01.T01:intron 40.0%
TTACAAGAGGGCAAAGAGTA+GGG - Chr4:66835050-66835069 MsG0480021987.01.T01:CDS 40.0%
TTATTGTGCTACAACCCCTT+TGG - Chr4:66837087-66837106 MsG0480021987.01.T01:intron 40.0%
TTCGCATTGGAACTTGATTC+AGG + Chr4:66834682-66834701 None:intergenic 40.0%
TTGATCACTTCCTCCATGTA+TGG - Chr4:66835696-66835715 MsG0480021987.01.T01:CDS 40.0%
TTTAGTATCTCCTCCCTAAC+AGG + Chr4:66834031-66834050 None:intergenic 40.0%
TTTCTTGCAAGACATGGAGA+GGG - Chr4:66834912-66834931 MsG0480021987.01.T01:CDS 40.0%
! AAAGAGGGGTTATCTAGGAT+TGG - Chr4:66834150-66834169 MsG0480021987.01.T01:intron 40.0%
! CAACATTCCATGGATTGACA+CGG + Chr4:66834774-66834793 None:intergenic 40.0%
! CTAGAGTATCAGTCAAAGAG+GGG - Chr4:66834136-66834155 MsG0480021987.01.T01:intron 40.0%
! GCAAGCAAATACAGAAGCAT+TGG + Chr4:66837304-66837323 None:intergenic 40.0%
! GGATGGATTTCCAGAAGATA+TGG - Chr4:66833586-66833605 MsG0480021987.01.T01:intron 40.0%
! GTCTAGAGTATCAGTCAAAG+AGG - Chr4:66834134-66834153 MsG0480021987.01.T01:intron 40.0%
! GTGTTATTGTCACAGCTGTA+AGG - Chr4:66834599-66834618 MsG0480021987.01.T01:intron 40.0%
! TCTTAGCTTTCAAAGGTAGC+TGG + Chr4:66833502-66833521 None:intergenic 40.0%
! TGGTTCCAGTATTGAACGAA+AGG - Chr4:66835957-66835976 MsG0480021987.01.T01:CDS 40.0%
! TTGCAGAGTGTAGAGTTTTG+TGG - Chr4:66833227-66833246 MsG0480021987.01.T01:intron 40.0%
! TTTTCTGCCTCCTGATGTTT+TGG - Chr4:66833706-66833725 MsG0480021987.01.T01:intron 40.0%
! TTTTGGATCTTCTCAGGCTA+AGG - Chr4:66836020-66836039 MsG0480021987.01.T01:CDS 40.0%
!! AAAGAGTAGGGCCATTTTGT+TGG - Chr4:66835062-66835081 MsG0480021987.01.T01:CDS 40.0%
!! ACAAAGGGTGGAGTTTTAGT+TGG - Chr4:66833534-66833553 MsG0480021987.01.T01:intron 40.0%
!! AGCAAATACAGAAGCATTGG+AGG + Chr4:66837301-66837320 None:intergenic 40.0%
!! ATATCTCCGATGATGGAAAG+GGG + Chr4:66833997-66834016 None:intergenic 40.0%
!! GAAAGGAAAGTGCTTTGGTT+TGG - Chr4:66835974-66835993 MsG0480021987.01.T01:CDS 40.0%
!! GCCATTTTGTTGGACTATGA+TGG - Chr4:66835072-66835091 MsG0480021987.01.T01:CDS 40.0%
!! GTTTTCATTGTTAGTGGACG+GGG - Chr4:66835186-66835205 MsG0480021987.01.T01:CDS 40.0%
!! TGAACGAAAGGAAAGTGCTT+TGG - Chr4:66835969-66835988 MsG0480021987.01.T01:CDS 40.0%
!! TGCGGCATGAAAAGCATTAT+CGG - Chr4:66834851-66834870 MsG0480021987.01.T01:CDS 40.0%
!! TGCTGCCAACTTTTCTAAGA+AGG - Chr4:66833933-66833952 MsG0480021987.01.T01:CDS 40.0%
!! TGCTTTGGTTTGGCAATACA+GGG - Chr4:66835984-66836003 MsG0480021987.01.T01:CDS 40.0%
!!! GTGGAGTTTTAGTTGGAATG+AGG - Chr4:66833541-66833560 MsG0480021987.01.T01:intron 40.0%
AAACAACACCCCAAATGGCA+AGG - Chr4:66834382-66834401 MsG0480021987.01.T01:intron 45.0%
AAAGAGAGGACAACAAAGGG+TGG - Chr4:66833522-66833541 MsG0480021987.01.T01:intron 45.0%
AACAGCTCTTCCTTGCCATT+TGG + Chr4:66834395-66834414 None:intergenic 45.0%
AACATCAGGAGGCAGAAAAG+TGG + Chr4:66833705-66833724 None:intergenic 45.0%
AAGTTGGCAGCACCATCAAA+TGG + Chr4:66833925-66833944 None:intergenic 45.0%
AAGTTTCCCATTCACCGTCT+TGG + Chr4:66835864-66835883 None:intergenic 45.0%
AATTTCCCAGCAATGGGATC+GGG - Chr4:66833326-66833345 MsG0480021987.01.T01:intron 45.0%
ACACTCAGCAAGGCTGTAAT+AGG + Chr4:66834581-66834600 None:intergenic 45.0%
ACATCAGGAGGCAGAAAAGT+GGG + Chr4:66833704-66833723 None:intergenic 45.0%
AGTTTATGCTCTGACCCTTC+TGG + Chr4:66832999-66833018 None:intergenic 45.0%
AGTTTCCCATTCACCGTCTT+GGG + Chr4:66835863-66835882 None:intergenic 45.0%
ATCTGTCATCACCAACACAC+AGG + Chr4:66837224-66837243 None:intergenic 45.0%
ATGCCTGTTGGGATTCACAT+GGG - Chr4:66834205-66834224 MsG0480021987.01.T01:intron 45.0%
ATTGTCACAGCTGTAAGGGA+TGG - Chr4:66834604-66834623 MsG0480021987.01.T01:intron 45.0%
CAATGCAGATCCATACATGG+AGG + Chr4:66835709-66835728 None:intergenic 45.0%
CAGAAATCCAAAAGGTCCCT+AGG - Chr4:66836463-66836482 MsG0480021987.01.T01:CDS 45.0%
CAGATAGTTAACCCTGCTAG+AGG - Chr4:66834421-66834440 MsG0480021987.01.T01:intron 45.0%
CAGTCAAAGAGGGGTTATCT+AGG - Chr4:66834145-66834164 MsG0480021987.01.T01:intron 45.0%
CCTGAGAAGATCCAAAACCA+AGG + Chr4:66836017-66836036 None:intergenic 45.0%
CTAGTAGGTCCTTAGTTGTC+GGG - Chr4:66836700-66836719 MsG0480021987.01.T01:intron 45.0%
CTCACATCCTGCAATGCAAA+TGG + Chr4:66837135-66837154 None:intergenic 45.0%
CTCTAGCAGGGTTAACTATC+TGG + Chr4:66834423-66834442 None:intergenic 45.0%
CTGAAACCAATCAGACCCTA+GGG + Chr4:66836482-66836501 None:intergenic 45.0%
CTTACAAGAGGGCAAAGAGT+AGG - Chr4:66835049-66835068 MsG0480021987.01.T01:CDS 45.0%
CTTCTTTGGGCTATTCGCAT+TGG + Chr4:66834695-66834714 None:intergenic 45.0%
CTTGGAATTGCTGCAGAACA+TGG - Chr4:66835249-66835268 MsG0480021987.01.T01:CDS 45.0%
GAACATAGGCTTCCCACAAA+TGG + Chr4:66833826-66833845 None:intergenic 45.0%
GAATTTCCCAGCAATGGGAT+CGG - Chr4:66833325-66833344 MsG0480021987.01.T01:intron 45.0%
GACTTCGAAAACCCGAAACA+TGG - Chr4:66836614-66836633 MsG0480021987.01.T01:CDS 45.0%
GCAGTTGCTTCAACATTCCA+TGG + Chr4:66834784-66834803 None:intergenic 45.0%
GCTAGTAGGTCCTTAGTTGT+CGG - Chr4:66836699-66836718 MsG0480021987.01.T01:intron 45.0%
GGAGAAACCTCAGTCAAGTT+TGG + Chr4:66837461-66837480 None:intergenic 45.0%
GGAGGGAGTTTAAAGAACGA+AGG - Chr4:66833354-66833373 MsG0480021987.01.T01:intron 45.0%
GGGAGTTTAAAGAACGAAGG+CGG - Chr4:66833357-66833376 MsG0480021987.01.T01:intron 45.0%
GTATCCCTTTACCTCTAGCA+GGG + Chr4:66834435-66834454 None:intergenic 45.0%
GTTAACCCTGCTAGAGGTAA+AGG - Chr4:66834427-66834446 MsG0480021987.01.T01:intron 45.0%
GTTCTTGGTCCATGGTTAGA+TGG + Chr4:66836821-66836840 None:intergenic 45.0%
GTTTCTTGCAAGACATGGAG+AGG - Chr4:66834911-66834930 MsG0480021987.01.T01:CDS 45.0%
TAGATCAGGTTCTTGGTCCA+TGG + Chr4:66836829-66836848 None:intergenic 45.0%
TCCCCAGATTCTTCTATGCA+TGG + Chr4:66837426-66837445 None:intergenic 45.0%
TCTGGGAATTTCCCAGCAAT+GGG - Chr4:66833320-66833339 MsG0480021987.01.T01:intron 45.0%
TCTGTATTTGCTTGCACGGT+TGG - Chr4:66837309-66837328 MsG0480021987.01.T01:intron 45.0%
TGCTGAAACAACACCCCAAA+TGG - Chr4:66834377-66834396 MsG0480021987.01.T01:intron 45.0%
TGGGGAATAGGTCTTAGCTT+TGG - Chr4:66834964-66834983 MsG0480021987.01.T01:CDS 45.0%
TGTATCCCTTTACCTCTAGC+AGG + Chr4:66834436-66834455 None:intergenic 45.0%
TGTGAGCAAAGGCTTAGTTG+CGG - Chr4:66837149-66837168 MsG0480021987.01.T01:intron 45.0%
TGTTATGAGGATGTCGGATG+AGG - Chr4:66834240-66834259 MsG0480021987.01.T01:intron 45.0%
TGTTCAGACCTAGGGATGAA+AGG + Chr4:66835462-66835481 None:intergenic 45.0%
TTGTCACAGCTGTAAGGGAT+GGG - Chr4:66834605-66834624 MsG0480021987.01.T01:intron 45.0%
TTTGTGGGAAGCCTATGTTC+TGG - Chr4:66833826-66833845 MsG0480021987.01.T01:CDS 45.0%
! ACAGCTCTTCCTTGCCATTT+GGG + Chr4:66834394-66834413 None:intergenic 45.0%
! AGCAGGATCAACAGAGTGTT+TGG - Chr4:66834493-66834512 MsG0480021987.01.T01:intron 45.0%
! CAGCTTGTTTGCCAGAACAT+AGG + Chr4:66833840-66833859 None:intergenic 45.0%
! CGAGAATCGTTGCGTTTTGA+TGG - Chr4:66832790-66832809 MsG0480021987.01.T01:intron 45.0%
! TCTGAAACCAATCAGACCCT+AGG + Chr4:66836483-66836502 None:intergenic 45.0%
! TGGTGATGACAGATCAGATG+AGG - Chr4:66837230-66837249 MsG0480021987.01.T01:intron 45.0%
! TTCTGGGAATTTCCCAGCAA+TGG - Chr4:66833319-66833338 MsG0480021987.01.T01:intron 45.0%
!! GTGCTTTGGTTTGGCAATAC+AGG - Chr4:66835983-66836002 MsG0480021987.01.T01:CDS 45.0%
!!! CCTTGGTTTTGGATCTTCTC+AGG - Chr4:66836014-66836033 MsG0480021987.01.T01:CDS 45.0%
!!! TTTTTCAGGTGGTCCCAAGA+CGG - Chr4:66835847-66835866 MsG0480021987.01.T01:CDS 45.0%
AAAGGTCCCTAGGGTCTGAT+TGG - Chr4:66836473-66836492 MsG0480021987.01.T01:CDS 50.0%
ACAAATGGCGATCAAAGCGG+TGG + Chr4:66833811-66833830 None:intergenic 50.0%
ACCGCTTTGATCGCCATTTG+TGG - Chr4:66833810-66833829 MsG0480021987.01.T01:CDS 50.0%
ACTCAACAGGAACTTCTCCC+TGG + Chr4:66835651-66835670 None:intergenic 50.0%
ATTTCCCAGCAATGGGATCG+GGG - Chr4:66833327-66833346 MsG0480021987.01.T01:intron 50.0%
CATCAGGAGGCAGAAAAGTG+GGG + Chr4:66833703-66833722 None:intergenic 50.0%
CATGCCTGTTGGGATTCACA+TGG - Chr4:66834204-66834223 MsG0480021987.01.T01:intron 50.0%
CCCACAAATGGCGATCAAAG+CGG + Chr4:66833814-66833833 None:intergenic 50.0%
CCGCTTTGATCGCCATTTGT+GGG - Chr4:66833811-66833830 MsG0480021987.01.T01:CDS 50.0%
CTCAGAGGTGGATGATGATC+AGG - Chr4:66833412-66833431 MsG0480021987.01.T01:intron 50.0%
CTGTTGGGATTCACATGGGT+CGG - Chr4:66834209-66834228 MsG0480021987.01.T01:intron 50.0%
GAATGTTGAAGCAACTGCGG+AGG - Chr4:66834786-66834805 MsG0480021987.01.T01:CDS 50.0%
GACGGTGAATGGGAAACTTG+TGG - Chr4:66835865-66835884 MsG0480021987.01.T01:CDS 50.0%
GCATAGCCCCTTTCCATCAT+CGG - Chr4:66833988-66834007 MsG0480021987.01.T01:CDS 50.0%
GCATTGCAGGATGTGAGCAA+AGG - Chr4:66837138-66837157 MsG0480021987.01.T01:intron 50.0%
GGTGTTCTCCATCGCTTAGT+GGG - Chr4:66834743-66834762 MsG0480021987.01.T01:CDS 50.0%
GTATGTCAGCACTCATGACG+TGG - Chr4:66834873-66834892 MsG0480021987.01.T01:CDS 50.0%
GTCTTATGGCAGTCATGCCA+GGG - Chr4:66835631-66835650 MsG0480021987.01.T01:CDS 50.0%
GTGTTCTCCATCGCTTAGTG+GGG - Chr4:66834744-66834763 MsG0480021987.01.T01:CDS 50.0%
TAGGACTCTTCCTGTTAGGG+AGG - Chr4:66834018-66834037 MsG0480021987.01.T01:CDS 50.0%
TATCGTTGAAGTGAAGCCCC+AGG - Chr4:66836107-66836126 MsG0480021987.01.T01:CDS 50.0%
TCCTGCTGCAGTCGTATGTT+GGG - Chr4:66834112-66834131 MsG0480021987.01.T01:intron 50.0%
TGTCTTATGGCAGTCATGCC+AGG - Chr4:66835630-66835649 MsG0480021987.01.T01:CDS 50.0%
TTCCTGCTGCAGTCGTATGT+TGG - Chr4:66834111-66834130 MsG0480021987.01.T01:intron 50.0%
! AACAGAGTGTTTGGACGACC+TGG - Chr4:66834502-66834521 MsG0480021987.01.T01:intron 50.0%
! ATCAGACCCTAGGGACCTTT+TGG + Chr4:66836473-66836492 None:intergenic 50.0%
! CAGCTCTTCCTTGCCATTTG+GGG + Chr4:66834393-66834412 None:intergenic 50.0%
! CATTGTTAGTGGACGGGGTA+GGG - Chr4:66835191-66835210 MsG0480021987.01.T01:CDS 50.0%
! GATGTCGGATGAGGAGTGTA+AGG - Chr4:66834249-66834268 MsG0480021987.01.T01:intron 50.0%
! GCTGACTTTGTCCTGTGTGT+TGG - Chr4:66837210-66837229 MsG0480021987.01.T01:intron 50.0%
! GGATGAGGAGTGTAAGGCAA+GGG - Chr4:66834255-66834274 MsG0480021987.01.T01:intron 50.0%
! GTGATGGAGAGAAGCAGTTG+CGG - Chr4:66834833-66834852 MsG0480021987.01.T01:CDS 50.0%
! TCATTGTTAGTGGACGGGGT+AGG - Chr4:66835190-66835209 MsG0480021987.01.T01:CDS 50.0%
ACCCAACATACGACTGCAGC+AGG + Chr4:66834116-66834135 None:intergenic 55.0%
AGACATGGAGAGGGCTTGCA+CGG - Chr4:66834921-66834940 MsG0480021987.01.T01:CDS 55.0%
AGCTTACGTCACGGACCGAT+AGG + Chr4:66832282-66832301 None:intergenic 55.0%
CAATACAGGGATGCCGACCT+TGG - Chr4:66835997-66836016 MsG0480021987.01.T01:CDS 55.0%
CGACCCATGTGAATCCCAAC+AGG + Chr4:66834211-66834230 None:intergenic 55.0%
CTTTGCGGCAACAGGCTCAT+TGG + Chr4:66836076-66836095 None:intergenic 55.0%
GCACTCATGACGTGGCTTAC+TGG - Chr4:66834881-66834900 MsG0480021987.01.T01:CDS 55.0%
GGGCTATCCGTGTCAATCCA+TGG - Chr4:66834764-66834783 MsG0480021987.01.T01:CDS 55.0%
GGGTGTTCTCCATCGCTTAG+TGG - Chr4:66834742-66834761 MsG0480021987.01.T01:CDS 55.0%
GTGGTCCCAAGACGGTGAAT+GGG - Chr4:66835855-66835874 MsG0480021987.01.T01:CDS 55.0%
TGACCACTCTTTGCGGCAAC+AGG + Chr4:66836084-66836103 None:intergenic 55.0%
! AGGGATGCCGACCTTGGTTT+TGG - Chr4:66836003-66836022 MsG0480021987.01.T01:CDS 55.0%
! CGGATGAGGAGTGTAAGGCA+AGG - Chr4:66834254-66834273 MsG0480021987.01.T01:intron 55.0%
!! TCCACCTCTGAGACAATCCC+CGG + Chr4:66833404-66833423 None:intergenic 55.0%
AAGAACGAAGGCGGATGCCG+AGG - Chr4:66833366-66833385 MsG0480021987.01.T01:intron 60.0%
AGAACGAAGGCGGATGCCGA+GGG - Chr4:66833367-66833386 MsG0480021987.01.T01:intron 60.0%
CCCGGGACACTCATAACCCT+CGG + Chr4:66833386-66833405 None:intergenic 60.0%
CCGAGGGTTATGAGTGTCCC+GGG - Chr4:66833383-66833402 MsG0480021987.01.T01:intron 60.0%
CGAGGGTTATGAGTGTCCCG+GGG - Chr4:66833384-66833403 MsG0480021987.01.T01:intron 60.0%
CGGATAGCCCCACTAAGCGA+TGG + Chr4:66834754-66834773 None:intergenic 60.0%
GAGCCTGTTGCCGCAAAGAG+TGG - Chr4:66836078-66836097 MsG0480021987.01.T01:CDS 60.0%
GCCGAGGGTTATGAGTGTCC+CGG - Chr4:66833382-66833401 MsG0480021987.01.T01:intron 60.0%
GGTGGTCCCAAGACGGTGAA+TGG - Chr4:66835854-66835873 MsG0480021987.01.T01:CDS 60.0%
TGTCCCGGGGATTGTCTCAG+AGG - Chr4:66833397-66833416 MsG0480021987.01.T01:intron 60.0%
!! CCACCTCTGAGACAATCCCC+GGG + Chr4:66833403-66833422 None:intergenic 60.0%
AATGGGATCGGGGTCGGGGA+GGG - Chr4:66833337-66833356 MsG0480021987.01.T01:intron 65.0%
CAGCAATGGGATCGGGGTCG+GGG - Chr4:66833333-66833352 MsG0480021987.01.T01:intron 65.0%
CCAGCAATGGGATCGGGGTC+GGG - Chr4:66833332-66833351 MsG0480021987.01.T01:intron 65.0%
CCCAGCAATGGGATCGGGGT+CGG - Chr4:66833331-66833350 MsG0480021987.01.T01:intron 65.0%
CCCGGGGATTGTCTCAGAGG+TGG - Chr4:66833400-66833419 MsG0480021987.01.T01:intron 65.0%
CCGACCCCGATCCCATTGCT+GGG + Chr4:66833334-66833353 None:intergenic 65.0%
CAATGGGATCGGGGTCGGGG+AGG - Chr4:66833336-66833355 MsG0480021987.01.T01:intron 70.0%
CCCGACCCCGATCCCATTGC+TGG + Chr4:66833335-66833354 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 66832247 66837666 66832247 ID=MsG0480021987.01;Name=MsG0480021987.01
Chr4 mRNA 66832247 66837666 66832247 ID=MsG0480021987.01.T01;Parent=MsG0480021987.01;Name=MsG0480021987.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0.66|0.75|1|0.66|0.5|4|211|893
Chr4 exon 66832247 66832766 66832247 ID=MsG0480021987.01.T01:exon:20971;Parent=MsG0480021987.01.T01
Chr4 exon 66833785 66834058 66833785 ID=MsG0480021987.01.T01:exon:20970;Parent=MsG0480021987.01.T01
Chr4 exon 66834630 66836680 66834630 ID=MsG0480021987.01.T01:exon:20969;Parent=MsG0480021987.01.T01
Chr4 exon 66837619 66837666 66837619 ID=MsG0480021987.01.T01:exon:20968;Parent=MsG0480021987.01.T01
Chr4 CDS 66837619 66837666 66837619 ID=MsG0480021987.01.T01:cds;Parent=MsG0480021987.01.T01
Chr4 CDS 66834630 66836680 66834630 ID=MsG0480021987.01.T01:cds;Parent=MsG0480021987.01.T01
Chr4 CDS 66833785 66834058 66833785 ID=MsG0480021987.01.T01:cds;Parent=MsG0480021987.01.T01
Chr4 CDS 66832458 66832766 66832458 ID=MsG0480021987.01.T01:cds;Parent=MsG0480021987.01.T01
Chr4 three_prime_UTR 66832247 66832457 66832247 ID=MsG0480021987.01.T01:three_prime_utr;Parent=MsG0480021987.01.T01
Gene Sequence

>MsG0480021987.01.T01

ATGAAAATTGTGAAGAATTGTGATTTAAAATTCCTATCGGTCCGTGACAGTGTAGAGTTTTGTGGAGAACTGTGTATTTTTTGGAAGGACGTAAAGATGATGTCCAGATCGTATACAAACCTTTTAGATTTGGCTTCTGGGAATTTCCCAGCAATGGGATCGGGGTCGGGGAGGGAGTTTAAAGAACGAAGGCGGATGCCGAGGGTTATGAGTGTCCCGGGGATTGTCTCAGAGGTGGATGATGATCAGGCAGTAAGTGTTTCTTCGGATAATCCGTCAACTATTTCTTCTGATCGAATTATCATTGTAGCAAACCAGCTACCTTTGAAAGCTAAGAAAAGAGAGGACAACAAAGGGTGGAGTTTTAGTTGGAATGAGGATTCTTTGCTATTACAGCTTAAGGATGGATTTCCAGAAGATATGGAGGTTCTGTATGTTGGATCTTTGCGCGTTGACATTGATCCCGCTGAACAAGATGATGTATCACAGTATTTGCTGGAGAAATTCAAATGTGTCCCCACTTTTCTGCCTCCTGATGTTTTGGCAAACTTTTATGATGGCTTCTGCAAAAGGCAATTATGGCCACTTTTTCATTACAAGTTACCGTTTTCAACTGATAAAAGCCACCGCTTTGATCGCCATTTGTGGGAAGCCTATGTTCTGGCAAACAAGCTGTTCTTTCAGAAGGTAGTTGAAATAATAAACCCGGAGGATGATTATATTTGGGTTCATGATTACCATTTGATGGTGCTGCCAACTTTTCTAAGAAGGCGTTTTAACAGGGTTAAAATGGGATTTTTCTTGCATAGCCCCTTTCCATCATCGGAGATATATAGGACTCTTCCTGTTAGGGAGGAGATACTAAAAGCTTTACTAAATTCTGATATCATTGGATTCCATACTTTCGATTATGCTCGTCATTTTCTTTCCTGCTGCAGTCGTATGTTGGGTCTAGAGTATCAGTCAAAGAGGGGTTATCTAGGATTGGAATATTACGGGAGGACTATCAGTATTAAGATCATGCCTGTTGGGATTCACATGGGTCGGATTGAATCTGTTATGAGGATGTCGGATGAGGAGTGTAAGGCAAGGGAGCTCAAACAGCAATTTGAAGGAAAAACCATTTTGCTTGGTATTGACGATATGGACATTTTTAAAGGTATAAATTTGAAGATTCTGGCTATGGAGCAGATGCTGAAACAACACCCCAAATGGCAAGGAAGAGCTGTTTTAGTCCAGATAGTTAACCCTGCTAGAGGTAAAGGGATACATGTAGATGAAATCCATTCTGAAATAGAAGAAAGTTGCAGCAGGATCAACAGAGTGTTTGGACGACCTGGTTATGAACCTATTGTGTTTATTGACAGATCGGTTCCAATTACTGAAAAAGTTGCCTATTACAGCCTTGCTGAGTGTGTTATTGTCACAGCTGTAAGGGATGGGATGAACCTAACTCCTTATGAATATATTGTTTGTAGACAGGGAATATCTGGTCCTGAATCAAGTTCCAATGCGAATAGCCCAAAGAAGAGCATGCTTGTAATATCAGAATTTATTGGGTGTTCTCCATCGCTTAGTGGGGCTATCCGTGTCAATCCATGGAATGTTGAAGCAACTGCGGAGGCAATGAATGAAGCCATTTCAATGAGTGATGGAGAGAAGCAGTTGCGGCATGAAAAGCATTATCGGTATGTCAGCACTCATGACGTGGCTTACTGGTCACGTAGTTTCTTGCAAGACATGGAGAGGGCTTGCACGGACCTTCTTAGAAAAAGATGTTGGGGAATAGGTCTTAGCTTTGGATTTAGAGTTGTGGCTCTTGACCCTAACTTTAAAAAGCTCTCAATTGATGCTATGGTTTCAGCTTACAAGAGGGCAAAGAGTAGGGCCATTTTGTTGGACTATGATGGTACTGTGATGCCACAAAACTCCATTAATAAGAGTCCAAGCAAAGAGGTCATATCTCTTTTGGAAAGTCTCTGTGCAGACCCCAAAAATGTTGTTTTCATTGTTAGTGGACGGGGTAGGGATAGCTTAAGTGAATGGTTTACTCCCTGTAAAAAACTTGGAATTGCTGCAGAACATGGATACTTCTTGAGGTGGTCCCAAGACGGTGAATGGGAAACTTGTGGTAATTGCTCTGATTTTGGATGGATGCAGATTGCTGAACCTGTAATGAAACTATATACAGAGGCAACTGATGGTTCCAGTATTGAACGAAAGGAAAGTGCTTTGGTTTGGCAATACAGGGATGCCGACCTTGGTTTTGGATCTTCTCAGGCTAAGGAAATGTTAGATCATCTAGAAAGTGTTTTGGCCAATGAGCCTGTTGCCGCAAAGAGTGGTCAGTTTATCGTTGAAGTGAAGCCCCAGGATGTGAGCAAAGGCTTAGTTGCGGACAAGATATTTTCGTCAATGACTGAAAGTGACAAACAGGCTGACTTTGTCCTGTGTGTTGGTGATGACAGATCAGATGAGGACATGTTTGAAATAGTTAGTAGTGCAATCTCAAGGAATATTCTTTCCTCCAATGCTTCTGTATTTGCTTGCACGGTTGGACAAAAGCCAAGTAAAGCAAAGTATTATCTGGATGATACTTCTGAAGTAATAAATATGCTAGAATCTTTGGCTGAAGAATCAGATTCTTCACCATGCATAGAAGAATCTGGGGATTCCTCTTGA
Protein sequence

>MsG0480021987.01.T01

MKIVKNCDLKFLSVRDSVEFCGELCIFWKDVKMMSRSYTNLLDLASGNFPAMGSGSGREFKERRRMPRVMSVPGIVSEVDDDQAVSVSSDNPSTISSDRIIIVANQLPLKAKKREDNKGWSFSWNEDSLLLQLKDGFPEDMEVLYVGSLRVDIDPAEQDDVSQYLLEKFKCVPTFLPPDVLANFYDGFCKRQLWPLFHYKLPFSTDKSHRFDRHLWEAYVLANKLFFQKVVEIINPEDDYIWVHDYHLMVLPTFLRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGIHMGRIESVMRMSDEECKARELKQQFEGKTILLGIDDMDIFKGINLKILAMEQMLKQHPKWQGRAVLVQIVNPARGKGIHVDEIHSEIEESCSRINRVFGRPGYEPIVFIDRSVPITEKVAYYSLAECVIVTAVRDGMNLTPYEYIVCRQGISGPESSSNANSPKKSMLVISEFIGCSPSLSGAIRVNPWNVEATAEAMNEAISMSDGEKQLRHEKHYRYVSTHDVAYWSRSFLQDMERACTDLLRKRCWGIGLSFGFRVVALDPNFKKLSIDAMVSAYKRAKSRAILLDYDGTVMPQNSINKSPSKEVISLLESLCADPKNVVFIVSGRGRDSLSEWFTPCKKLGIAAEHGYFLRWSQDGEWETCGNCSDFGWMQIAEPVMKLYTEATDGSSIERKESALVWQYRDADLGFGSSQAKEMLDHLESVLANEPVAAKSGQFIVEVKPQDVSKGLVADKIFSSMTESDKQADFVLCVGDDRSDEDMFEIVSSAISRNILSSNASVFACTVGQKPSKAKYYLDDTSEVINMLESLAEESDSSPCIEESGDSS*