AlfalfaGEDB | MsG0480019906.01

M. sativa cultivar ZhongmuNo.1 / MsG0480019906.01

KEGG: K00006
GO: GO:0004367 GO:0005975 GO:0006072 GO:0009331 GO:0016491 GO:0016616 GO:0046168 GO:0051287 GO:0055114
PFAM: PF01210 PF07479

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480019906.01.T02	XP_024630621.1	98.69	458	6	0	1	458	1	458	0	932
MsG0480019906.01.T01	XP_024630621.1	98.69	458	6	0	1	458	1	458	0	932

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480019906.01.T01	Q8S0G4	83.149	451	75	1	6	456	6	455	0	775
MsG0480019906.01.T02	Q8S0G4	83.149	451	75	1	6	456	6	455	0	775

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480019906.01.T01	G7JUR3	98.690	458	6	0	1	458	1	458	0.0	932
MsG0480019906.01.T02	G7JUR3	98.690	458	6	0	1	458	1	458	0.0	932

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0180003689.01	MsG0480019906.01	0.804920	1.713317e-49	8.945316e-47
MsG0180003778.01	MsG0480019906.01	0.833795	4.344559e-56	5.057276e-53
MsG0180005272.01	MsG0480019906.01	0.828954	6.743799e-55	6.804066e-52
MsG0180006076.01	MsG0480019906.01	-0.832119	1.133485e-55	1.254954e-52
MsG0280011331.01	MsG0480019906.01	0.817430	3.311628e-52	2.411252e-49
MsG0380012697.01	MsG0480019906.01	0.813359	2.664560e-51	1.736366e-48
MsG0480019906.01	MsG0480021354.01	0.830282	3.206417e-55	3.362903e-52
MsG0480019906.01	MsG0480021977.01	0.848768	4.965036e-60	9.210012e-57
MsG0480019906.01	MsG0480021987.01	0.818122	2.311343e-52	1.715098e-49
MsG0480019906.01	MsG0480023944.01	0.832884	7.326825e-56	8.298890e-53
MsG0480019906.01	MsG0480023987.01	0.861833	7.772422e-64	2.228424e-60
MsG0480019906.01	MsG0580025071.01	0.826089	3.284337e-54	3.049528e-51
MsG0480019906.01	MsG0580030179.01	0.809503	1.832312e-50	1.077656e-47
MsG0480019906.01	MsG0680032416.01	-0.845766	3.309348e-59	5.574503e-56
MsG0480019906.01	MsG0780036793.01	0.819502	1.122903e-52	8.656728e-50
MsG0480019906.01	MsG0780039234.01	0.808857	2.519922e-50	1.456697e-47
MsG0480019906.01	MsG0780040118.01	0.832644	8.402555e-56	9.449670e-53
MsG0480019906.01	MsG0780040119.01	0.894305	2.794002e-75	2.762258e-71
MsG0480019906.01	MsG0780040323.01	0.803332	3.666753e-49	1.837572e-46
MsG0480019906.01	MsG0780040564.01	0.801294	9.635594e-49	4.585015e-46
MsG0480019906.01	MsG0780040879.01	0.804710	1.895721e-49	9.843311e-47
MsG0480019906.01	MsG0780040905.01	0.858994	5.621065e-63	1.462003e-59
MsG0480019906.01	MsG0780041548.01	0.829050	6.393163e-55	6.468411e-52
MsG0480019906.01	MsG0880046010.01	-0.806180	9.324340e-50	5.027970e-47
MsG0480019906.01	MsG0880046337.01	0.809994	1.436939e-50	8.561922e-48
MsG0380015641.01	MsG0480019906.01	0.857309	1.782572e-62	4.380318e-59
MsG0380015871.01	MsG0480019906.01	0.809299	2.026328e-50	1.185349e-47
MsG0380016156.01	MsG0480019906.01	0.801920	7.169883e-49	3.466066e-46
MsG0380016363.01	MsG0480019906.01	0.809160	2.171087e-50	1.265296e-47
MsG0380016567.01	MsG0480019906.01	0.862727	4.129727e-64	1.221795e-60
MsG0380016865.01	MsG0480019906.01	0.840367	9.077028e-58	1.290139e-54
MsG0380017212.01	MsG0480019906.01	0.812469	4.173103e-51	2.655696e-48
MsG0380017451.01	MsG0480019906.01	0.814639	1.390886e-51	9.383624e-49
MsG0380017660.01	MsG0480019906.01	0.813161	2.944710e-51	1.908413e-48
MsG0280007667.01	MsG0480019906.01	0.800657	1.300465e-48	6.089118e-46
MsG0280008854.01	MsG0480019906.01	0.802220	6.221253e-49	3.030511e-46
MsG0280009108.01	MsG0480019906.01	0.851390	9.154371e-61	1.850146e-57
MsG0280009139.01	MsG0480019906.01	0.824501	7.800782e-54	6.921991e-51
MsG0280009241.01	MsG0480019906.01	0.803104	4.088047e-49	2.036672e-46
MsG0280010240.01	MsG0480019906.01	0.839840	1.245493e-57	1.741370e-54

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	bit score
MsG0480019906.01.T02	MTR_4g043650	98.690	458	6	1	458	1	458	932
MsG0480019906.01.T02	MTR_7g090970	84.444	450	70	8	457	8	457	797
MsG0480019906.01.T02	MTR_7g090970	85.366	410	60	8	417	8	417	733
MsG0480019906.01.T01	MTR_4g043650	98.690	458	6	1	458	1	458	932
MsG0480019906.01.T01	MTR_7g090970	84.444	450	70	8	457	8	457	797
MsG0480019906.01.T01	MTR_7g090970	85.366	410	60	8	417	8	417	733

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480019906.01.T02	AT2G41540	84.000	450	72	0	7	456	12	461	0.0	770
MsG0480019906.01.T02	AT2G41540	84.000	450	72	0	7	456	12	461	0.0	770
MsG0480019906.01.T02	AT2G41540	84.000	450	72	0	7	456	12	461	0.0	770
MsG0480019906.01.T02	AT2G41540	84.000	450	72	0	7	456	12	461	0.0	770
MsG0480019906.01.T02	AT3G07690	82.955	440	75	0	19	458	17	456	0.0	769
MsG0480019906.01.T02	AT3G07690	81.111	450	75	1	19	458	17	466	0.0	760
MsG0480019906.01.T02	AT5G40610	26.988	415	217	20	30	426	48	394	7.39e-15	76.6
MsG0480019906.01.T01	AT2G41540	84.000	450	72	0	7	456	12	461	0.0	770
MsG0480019906.01.T01	AT2G41540	84.000	450	72	0	7	456	12	461	0.0	770
MsG0480019906.01.T01	AT2G41540	84.000	450	72	0	7	456	12	461	0.0	770
MsG0480019906.01.T01	AT2G41540	84.000	450	72	0	7	456	12	461	0.0	770
MsG0480019906.01.T01	AT3G07690	82.955	440	75	0	19	458	17	456	0.0	769
MsG0480019906.01.T01	AT3G07690	81.111	450	75	1	19	458	17	466	0.0	760
MsG0480019906.01.T01	AT5G40610	26.988	415	217	20	30	426	48	394	7.39e-15	76.6

Find 76 sgRNAs with CRISPR-Local

Find 308 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCTTTCTTAGTTTGTATTAA+TGG	0.134992	4:-29376059	MsG0480019906.01.T01:five_prime_UTR
CTTTCTTAGTTTGTATTAAT+GGG	0.164369	4:-29376058	MsG0480019906.01.T01:five_prime_UTR
CATCATCAACTTTCCCCATT+AGG	0.251148	4:+29375828	None:intergenic
GGTTCTCTTCAAAGTGTAAA+TGG	0.275107	4:-29375884	MsG0480019906.01.T01:CDS
ATCATCAACTTTCCCCATTA+GGG	0.290579	4:+29375829	None:intergenic
AACATGCATTGAAGAGAAAA+AGG	0.300503	4:+29376104	None:intergenic
TTGTGTTGGAGGTGGTGCTT+GGG	0.318205	4:-29375789	MsG0480019906.01.T01:CDS
TTTGTGTTGGAGGTGGTGCT+TGG	0.332168	4:-29375790	MsG0480019906.01.T01:CDS
TGAAAGCAAGCTTAATTTGT+TGG	0.333432	4:-29375957	MsG0480019906.01.T01:five_prime_UTR
TCGAGGGGAGATTAGGTGAT+AGG	0.347018	4:-29375580	MsG0480019906.01.T01:CDS
AGTTCCTGTCATTATTTCAT+TGG	0.352790	4:-29375363	MsG0480019906.01.T01:CDS
TGTCATTATTTCATTGGCTA+AGG	0.362222	4:-29375357	MsG0480019906.01.T01:CDS
ATTTGTTGGTGTGGTGTCAT+TGG	0.365094	4:-29375943	MsG0480019906.01.T01:five_prime_UTR
TAAGGGTGTGGAGGCTGAAT+TGG	0.382414	4:-29375339	MsG0480019906.01.T01:CDS
TACACCTGTTTGCCCTTTGA+AGG	0.390970	4:-29375504	MsG0480019906.01.T01:CDS
GAAGGTTGTGACGAATTTGC+AGG	0.392149	4:-29375486	MsG0480019906.01.T01:CDS
ATGTGTTGAGGAGGTTGATT+AGG	0.393435	4:-29375625	MsG0480019906.01.T01:CDS
TTGAAGAAATTAGTAAGTAT+TGG	0.395541	4:-29375400	MsG0480019906.01.T01:CDS
GTTGGTGTGGTGTCATTGGT+TGG	0.396981	4:-29375939	MsG0480019906.01.T01:five_prime_UTR
GCTCTATCAACAGCTCTTCC+TGG	0.408239	4:+29375689	None:intergenic
GATGAGCTTAGAACCCTAAT+GGG	0.411719	4:-29375842	MsG0480019906.01.T01:CDS
TGATGAGCTTAGAACCCTAA+TGG	0.413049	4:-29375843	MsG0480019906.01.T01:CDS
CGAATTTGCAGGAAGCTGTA+TGG	0.426348	4:-29375475	MsG0480019906.01.T01:CDS
AAATATGTCGAGGGGAGATT+AGG	0.426665	4:-29375587	MsG0480019906.01.T01:CDS
GGTGTTATGATCCGCGGCTC+AGG	0.435974	4:+29375314	None:intergenic
TTGGTGTGGTGTCATTGGTT+GGG	0.450973	4:-29375938	MsG0480019906.01.T01:five_prime_UTR
TATTTCATTGGCTAAGGGTG+TGG	0.456675	4:-29375351	MsG0480019906.01.T01:CDS
GTCATTATTTCATTGGCTAA+GGG	0.457401	4:-29375356	MsG0480019906.01.T01:CDS
TAATACAAACTAAGAAAGAA+AGG	0.473727	4:+29376063	None:intergenic
GACTTAAACATCAGTACGCT+TGG	0.474409	4:-29376291	MsG0480019906.01.T02:five_prime_UTR
ACAACCTTCAAAGGGCAAAC+AGG	0.479400	4:+29375500	None:intergenic
GCTATGTTACAAGAGGCTTA+TGG	0.483493	4:-29375752	MsG0480019906.01.T01:CDS
TTGAGAATAGTTTGTGTTGG+AGG	0.502821	4:-29375800	MsG0480019906.01.T01:CDS
AACCATCATGGATACTCAAA+TGG	0.503751	4:-29375905	MsG0480019906.01.T01:CDS
TTCATTGGCTAAGGGTGTGG+AGG	0.505926	4:-29375348	MsG0480019906.01.T01:CDS
AAATTCGTCACAACCTTCAA+AGG	0.506986	4:+29375491	None:intergenic
TAATTTCTTCAAACACCTCA+CGG	0.507384	4:+29375411	None:intergenic
GTTTGAAGTGATTAATTCGA+GGG	0.516179	4:-29375651	MsG0480019906.01.T01:CDS
CCAACACAAACTATTCTCAA+TGG	0.516452	4:+29375803	None:intergenic
TTTCTTAGTTTGTATTAATG+GGG	0.527620	4:-29376057	MsG0480019906.01.T01:five_prime_UTR
ACCTCACGGGTTTCTGTCGA+TGG	0.528482	4:+29375425	None:intergenic
GATGCTGACATTGTGATTAA+CGG	0.537235	4:-29375452	MsG0480019906.01.T01:CDS
AGTATGGGTGGGTGTGTTGT+CGG	0.541935	4:+29376263	None:intergenic
AATTTCTTCAAACACCTCAC+GGG	0.548801	4:+29375412	None:intergenic
CGAGGGGAGATTAGGTGATA+GGG	0.549275	4:-29375579	MsG0480019906.01.T01:CDS
CCATTGAGAATAGTTTGTGT+TGG	0.551150	4:-29375803	MsG0480019906.01.T01:CDS
AACAGAAGAAACAGTATGGG+TGG	0.552754	4:+29376251	None:intergenic
AATACAAACTAAGAAAGAAA+GGG	0.554207	4:+29376064	None:intergenic
AGAATAGTTTGTGTTGGAGG+TGG	0.557952	4:-29375797	MsG0480019906.01.T01:CDS
TGTGTTGGAGGTGGTGCTTG+GGG	0.568789	4:-29375788	MsG0480019906.01.T01:CDS
AATTCGTCACAACCTTCAAA+GGG	0.569811	4:+29375492	None:intergenic
TGAAGTGATTAATTCGAGGG+AGG	0.572910	4:-29375648	MsG0480019906.01.T01:CDS
TGTTTGAAGTGATTAATTCG+AGG	0.574810	4:-29375652	MsG0480019906.01.T01:CDS
GAATTTGCAGGAAGCTGTAT+GGG	0.578928	4:-29375474	MsG0480019906.01.T01:CDS
TTAGCCAATGAAATAATGAC+AGG	0.582773	4:+29375359	None:intergenic
TTTAAGTCGTGAGACTATAA+CGG	0.585254	4:+29376306	None:intergenic
AACCATTTGAGTATCCATGA+TGG	0.585718	4:+29375903	None:intergenic
GTTTACAGCTATGTTACAAG+AGG	0.586719	4:-29375759	MsG0480019906.01.T01:CDS
GGATCAAAGATGAACCATCA+TGG	0.587501	4:-29375917	MsG0480019906.01.T01:exon
GCAAGCTTAATTTGTTGGTG+TGG	0.588337	4:-29375952	MsG0480019906.01.T01:five_prime_UTR
CGAGGGAGGATGTGTTGAGG+AGG	0.589261	4:-29375634	MsG0480019906.01.T01:CDS
TTCAAACAAATGCGTAGCCG+TGG	0.598990	4:+29375667	None:intergenic
ATTAGGATATGGAGAAGACC+AGG	0.601604	4:-29375707	MsG0480019906.01.T01:CDS
TGCGTATTTGAAATATGTCG+AGG	0.602106	4:-29375597	MsG0480019906.01.T01:CDS
TTACAAATCTAAAACAACAA+TGG	0.609126	4:+29376135	None:intergenic
CTGAATTGGTTCCTGAGCCG+CGG	0.610242	4:-29375325	MsG0480019906.01.T01:CDS
GCGTATTTGAAATATGTCGA+GGG	0.611600	4:-29375596	MsG0480019906.01.T01:CDS
ATTCGAGGGAGGATGTGTTG+AGG	0.636238	4:-29375637	MsG0480019906.01.T01:CDS
AGCGTAGGTGTTATGATCCG+CGG	0.638818	4:+29375308	None:intergenic
TCTAAAACAACAATGGAGAG+AGG	0.642235	4:+29376142	None:intergenic
ACAGAAGAAACAGTATGGGT+GGG	0.643902	4:+29376252	None:intergenic
AAGAGCTGTTGATAGAGCCA+CGG	0.655534	4:-29375684	MsG0480019906.01.T01:CDS
GCTCGACTGATCATTAGCGT+AGG	0.663687	4:+29375293	None:intergenic
CGTATTTGAAATATGTCGAG+GGG	0.666107	4:-29375595	MsG0480019906.01.T01:CDS
ATGAGCTTAGAACCCTAATG+GGG	0.672787	4:-29375841	MsG0480019906.01.T01:CDS
GCCATCGACAGAAACCCGTG+AGG	0.775448	4:-29375426	MsG0480019906.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TATTTAATATTCAAAAATGA+GGG	+	Chr4:29374448-29374467	None:intergenic	10.0%
!!!	ATAATATTTTGAATTTTAGT+TGG	-	Chr4:29375988-29376007	MsG0480019906.01.T01:five_prime_UTR	10.0%
!!!	ATTGTTTAAAATTTCATTTT+GGG	-	Chr4:29373701-29373720	MsG0480019906.01.T01:intron	10.0%
!!	ATTTCAATAATATTTCCTAT+TGG	+	Chr4:29375516-29375535	None:intergenic	15.0%
!!	CTATTTAATATTCAAAAATG+AGG	+	Chr4:29374449-29374468	None:intergenic	15.0%
!!!	CATTGTTTAAAATTTCATTT+TGG	-	Chr4:29373700-29373719	MsG0480019906.01.T01:intron	15.0%
!!!	TAGTTAAAATTTCATGTTTT+TGG	-	Chr4:29372141-29372160	MsG0480019906.01.T01:three_prime_UTR	15.0%
!!	AATACAAACTAAGAAAGAAA+GGG	+	Chr4:29372103-29372122	None:intergenic	20.0%
!!	ATTGAAAATATTCTCTATCT+TGG	-	Chr4:29373135-29373154	MsG0480019906.01.T01:CDS	20.0%
!!	TAATACAAACTAAGAAAGAA+AGG	+	Chr4:29372104-29372123	None:intergenic	20.0%
!!	TATAAACAACAATTGAATGT+AGG	+	Chr4:29373527-29373546	None:intergenic	20.0%
!!	TTAAAGAATGTATATGCTAT+TGG	-	Chr4:29373318-29373337	MsG0480019906.01.T01:CDS	20.0%
!!	TTATATAACATCTTCAAGAT+GGG	+	Chr4:29375095-29375114	None:intergenic	20.0%
!!	TTGAAGAAATTAGTAAGTAT+TGG	-	Chr4:29372764-29372783	MsG0480019906.01.T01:intron	20.0%
!!	TTTATATAACATCTTCAAGA+TGG	+	Chr4:29375096-29375115	None:intergenic	20.0%
!!!	AAATAATTACTCCTTTTGAA+TGG	+	Chr4:29374356-29374375	None:intergenic	20.0%
!!!	AAGATAGAGAATATTTTCAA+TGG	+	Chr4:29373136-29373155	None:intergenic	20.0%
!!!	AGATAGAGAATATTTTCAAT+GGG	+	Chr4:29373135-29373154	None:intergenic	20.0%
!!!	ATATATCTTGAACTTTTGAT+TGG	+	Chr4:29375921-29375940	None:intergenic	20.0%
!!!	ATATTCTTTGTTGTAAATCT+CGG	+	Chr4:29373178-29373197	None:intergenic	20.0%
!!!	CTTTCTTAGTTTGTATTAAT+GGG	-	Chr4:29372106-29372125	MsG0480019906.01.T01:three_prime_UTR	20.0%
!!!	TATGTAACTAACTTTTTCTA+TGG	-	Chr4:29375589-29375608	MsG0480019906.01.T01:CDS	20.0%
!!!	TCTTTCTTAGTTTGTATTAA+TGG	-	Chr4:29372105-29372124	MsG0480019906.01.T01:three_prime_UTR	20.0%
!!!	TGTTTTGCCATATATTATTT+GGG	-	Chr4:29373603-29373622	MsG0480019906.01.T01:intron	20.0%
!!!	TTACAAATCTAAAACAACAA+TGG	+	Chr4:29372032-29372051	None:intergenic	20.0%
!!!	TTGTTTTGCCATATATTATT+TGG	-	Chr4:29373602-29373621	MsG0480019906.01.T01:intron	20.0%
!!!	TTTCTTAGTTTGTATTAATG+GGG	-	Chr4:29372107-29372126	MsG0480019906.01.T01:three_prime_UTR	20.0%
!	AAAAAACAGAAGAAACAGTA+TGG	+	Chr4:29371920-29371939	None:intergenic	25.0%
!	AAAAACAGAAGAAACAGTAT+GGG	+	Chr4:29371919-29371938	None:intergenic	25.0%
!	AAAATTCATAAAAGGATTGC+TGG	+	Chr4:29375238-29375257	None:intergenic	25.0%
!	AAACAATAAATTTCATTGCG+CGG	+	Chr4:29372964-29372983	None:intergenic	25.0%
!	AACTATCAAGAAAGACTTAA+AGG	-	Chr4:29374077-29374096	MsG0480019906.01.T01:intron	25.0%
!	AGAAACTAAAATCAAGTCAA+GGG	+	Chr4:29373070-29373089	None:intergenic	25.0%
!	CAAATCTGTCTTTAGTTAAA+AGG	+	Chr4:29375353-29375372	None:intergenic	25.0%
!	CAGTTGAAATTTCATTTAAG+AGG	-	Chr4:29373498-29373517	MsG0480019906.01.T01:CDS	25.0%
!	GAAAAAGTTAGTTACATAAC+TGG	+	Chr4:29375587-29375606	None:intergenic	25.0%
!	GCAATTATATCAAATAAGAC+AGG	+	Chr4:29373479-29373498	None:intergenic	25.0%
!	GGAATATCAAGAAGAATTAT+AGG	-	Chr4:29374051-29374070	MsG0480019906.01.T01:intron	25.0%
!	GTTGGAACAAAATTCATAAA+AGG	+	Chr4:29375246-29375265	None:intergenic	25.0%
!!	AAGTTTTTCTACCATTCAAA+AGG	-	Chr4:29374342-29374361	MsG0480019906.01.T01:intron	25.0%
!!	ATCAATACCATTTGTTAGAA+AGG	-	Chr4:29374217-29374236	MsG0480019906.01.T01:intron	25.0%
!!	ATTTCATTCAAGTTTCTACT+TGG	-	Chr4:29374927-29374946	MsG0480019906.01.T01:CDS	25.0%
!!	CTTAAATGACCATAAACTTT+TGG	+	Chr4:29375859-29375878	None:intergenic	25.0%
!!	GATAGAGAATATTTTCAATG+GGG	+	Chr4:29373134-29373153	None:intergenic	25.0%
!!	GATTTTTATCACTCATCTAT+TGG	-	Chr4:29374722-29374741	MsG0480019906.01.T01:intron	25.0%
!!	TCAATCATCTTTTCTACAAT+AGG	+	Chr4:29373849-29373868	None:intergenic	25.0%
!!	TTATGATGATCGATTTAACA+GGG	-	Chr4:29374628-29374647	MsG0480019906.01.T01:intron	25.0%
!!	TTTATGATGATCGATTTAAC+AGG	-	Chr4:29374627-29374646	MsG0480019906.01.T01:intron	25.0%
!!!	TAAAAGGTGCATTTTAACTA+CGG	+	Chr4:29375337-29375356	None:intergenic	25.0%
!!!	TAGTTTTCTGTTATCGATTT+CGG	-	Chr4:29376190-29376209	MsG0480019906.01.T02:five_prime_UTR	25.0%
!!!	TTTTCTATGGTTTTGATTTG+TGG	-	Chr4:29375602-29375621	MsG0480019906.01.T01:CDS	25.0%
	AAATACCAAGACAACTTTGT+TGG	+	Chr4:29376051-29376070	None:intergenic	30.0%
	AACATGCATTGAAGAGAAAA+AGG	+	Chr4:29372063-29372082	None:intergenic	30.0%
	AACTAAAGACAGATTTGTGT+GGG	-	Chr4:29375356-29375375	MsG0480019906.01.T01:CDS	30.0%
	AAGCTAGGAAAATAAACACA+AGG	+	Chr4:29374382-29374401	None:intergenic	30.0%
	AATCTCGACTTAGATGATTT+GGG	-	Chr4:29373868-29373887	MsG0480019906.01.T01:intron	30.0%
	AATGTTGAACTCTGTTATTC+AGG	-	Chr4:29376072-29376091	MsG0480019906.01.T01:five_prime_UTR	30.0%
	ACATTTAACTGCACTATAAG+AGG	+	Chr4:29374578-29374597	None:intergenic	30.0%
	ACTTATGTAACCTTGTTGAA+AGG	-	Chr4:29374786-29374805	MsG0480019906.01.T01:intron	30.0%
	AGTTCCTGTCATTATTTCAT+TGG	-	Chr4:29372801-29372820	MsG0480019906.01.T01:intron	30.0%
	CACACATAAATAACATCAAG+AGG	+	Chr4:29374526-29374545	None:intergenic	30.0%
	CAGAAACTAAAATCAAGTCA+AGG	+	Chr4:29373071-29373090	None:intergenic	30.0%
	CATTTAACTGCACTATAAGA+GGG	+	Chr4:29374577-29374596	None:intergenic	30.0%
	CTTGTTACTCATGAAGTTAT+GGG	-	Chr4:29373291-29373310	MsG0480019906.01.T01:CDS	30.0%
	GAAAATATTCTCTATCTTGG+AGG	-	Chr4:29373138-29373157	MsG0480019906.01.T01:CDS	30.0%
	TAACTAAAGACAGATTTGTG+TGG	-	Chr4:29375355-29375374	MsG0480019906.01.T01:CDS	30.0%
	TAATTTCTTCAAACACCTCA+CGG	+	Chr4:29372756-29372775	None:intergenic	30.0%
	TCAGTGAATCCTTATATGTA+TGG	-	Chr4:29373767-29373786	MsG0480019906.01.T01:intron	30.0%
	TCATTACTTGCTTTATGATG+TGG	-	Chr4:29372919-29372938	MsG0480019906.01.T01:intron	30.0%
	TCTAGTTAGAATTGTTCAGA+TGG	-	Chr4:29374262-29374281	MsG0480019906.01.T01:intron	30.0%
	TCTGTGATATCGTATTCTTT+AGG	-	Chr4:29375288-29375307	MsG0480019906.01.T01:intron	30.0%
	TCTTGTTACTCATGAAGTTA+TGG	-	Chr4:29373290-29373309	MsG0480019906.01.T01:CDS	30.0%
	TGAATGGTAGAAAAACTTGT+TGG	+	Chr4:29374340-29374359	None:intergenic	30.0%
	TGATATTCCTTTACCTCTAA+TGG	+	Chr4:29374040-29374059	None:intergenic	30.0%
	TTAGCCAATGAAATAATGAC+AGG	+	Chr4:29372808-29372827	None:intergenic	30.0%
	TTTAAGTCGTGAGACTATAA+CGG	+	Chr4:29371861-29371880	None:intergenic	30.0%
	TTTGCCATATATTATTTGGG+AGG	-	Chr4:29373606-29373625	MsG0480019906.01.T01:intron	30.0%
!	AACCATTGGCAAAGTTTTTA+AGG	-	Chr4:29373235-29373254	MsG0480019906.01.T01:intron	30.0%
!	ATTTTCCTAGCTTCAATGAT+TGG	-	Chr4:29374389-29374408	MsG0480019906.01.T01:intron	30.0%
!	CTAGTTCTTCCATACATATA+AGG	+	Chr4:29373779-29373798	None:intergenic	30.0%
!	GTCATTATTTCATTGGCTAA+GGG	-	Chr4:29372808-29372827	MsG0480019906.01.T01:intron	30.0%
!	GTTTGAAGTGATTAATTCGA+GGG	-	Chr4:29372513-29372532	MsG0480019906.01.T01:CDS	30.0%
!	TGTCATTATTTCATTGGCTA+AGG	-	Chr4:29372807-29372826	MsG0480019906.01.T01:intron	30.0%
!	TGTTTGAAGTGATTAATTCG+AGG	-	Chr4:29372512-29372531	MsG0480019906.01.T01:CDS	30.0%
!	TTAGTATTTTTCTTCCATGC+CGG	-	Chr4:29373926-29373945	MsG0480019906.01.T01:intron	30.0%
!	TTTGGAAGATTGTGGTTTTT+GGG	-	Chr4:29372159-29372178	MsG0480019906.01.T01:three_prime_UTR	30.0%
!!	CAGATGAGATTTTGAAAGAT+GGG	-	Chr4:29372617-29372636	MsG0480019906.01.T01:intron	30.0%
!!	TGAAAGCAAGCTTAATTTGT+TGG	-	Chr4:29372207-29372226	MsG0480019906.01.T01:three_prime_UTR	30.0%
!!	TTAGATGATTTGGGTTTTTG+TGG	-	Chr4:29373877-29373896	MsG0480019906.01.T01:intron	30.0%
!!	TTTGGGTTGTTAGAGATTAT+GGG	-	Chr4:29373718-29373737	MsG0480019906.01.T01:intron	30.0%
!!	TTTTAGTTGGTTGTGTCTAT+TGG	-	Chr4:29376001-29376020	MsG0480019906.01.T01:five_prime_UTR	30.0%
!!	TTTTGGAAGATTGTGGTTTT+TGG	-	Chr4:29372158-29372177	MsG0480019906.01.T01:three_prime_UTR	30.0%
!!!	ACAAGGTTTTGATTAGGATA+TGG	-	Chr4:29372446-29372465	MsG0480019906.01.T01:CDS	30.0%
!!!	AGATGGGTTTTGTTTGAATA+TGG	-	Chr4:29372633-29372652	MsG0480019906.01.T01:intron	30.0%
!!!	TTAGAGACAAGGTTTTGATT+AGG	-	Chr4:29372440-29372459	MsG0480019906.01.T01:CDS	30.0%
!!!	TTATGGTAGTTTTAGAGACA+AGG	-	Chr4:29372429-29372448	MsG0480019906.01.T01:CDS	30.0%
!!!	TTCATGTTTTTGGAAGATTG+TGG	-	Chr4:29372151-29372170	MsG0480019906.01.T01:three_prime_UTR	30.0%
!!!	TTTTGGGTTGTTAGAGATTA+TGG	-	Chr4:29373717-29373736	MsG0480019906.01.T01:intron	30.0%
	AAAGTTCACGATTAGAATCC+CGG	+	Chr4:29373948-29373967	None:intergenic	35.0%
	AAATTCGTCACAACCTTCAA+AGG	+	Chr4:29372676-29372695	None:intergenic	35.0%
	AACCATCATGGATACTCAAA+TGG	-	Chr4:29372259-29372278	MsG0480019906.01.T01:three_prime_UTR	35.0%
	AACCATTTGAGTATCCATGA+TGG	+	Chr4:29372264-29372283	None:intergenic	35.0%
	AACTCAACCATTAGAGGTAA+AGG	-	Chr4:29374030-29374049	MsG0480019906.01.T01:intron	35.0%
	AAGCGTGTCAAAAACAACTT+TGG	+	Chr4:29371972-29371991	None:intergenic	35.0%
	AATACGATATCACAGAACAG+CGG	+	Chr4:29375284-29375303	None:intergenic	35.0%
	AATGTATATGCTATTGGAGC+AGG	-	Chr4:29373324-29373343	MsG0480019906.01.T01:CDS	35.0%
	AATTCGTCACAACCTTCAAA+GGG	+	Chr4:29372675-29372694	None:intergenic	35.0%
	AATTTCTTCAAACACCTCAC+GGG	+	Chr4:29372755-29372774	None:intergenic	35.0%
	ACATGCCTAGCTTAAAAGAA+CGG	-	Chr4:29373668-29373687	MsG0480019906.01.T01:intron	35.0%
	AGAAAAATGGAGGAAACCAT+TGG	-	Chr4:29373221-29373240	MsG0480019906.01.T01:intron	35.0%
	AGACTTAAAGGTCAGTGATT+TGG	-	Chr4:29374089-29374108	MsG0480019906.01.T01:intron	35.0%
	AGTTATACCGATAACTACAC+AGG	+	Chr4:29376145-29376164	None:intergenic	35.0%
	ATAATATTTCCTATTGGCGC+AGG	+	Chr4:29375510-29375529	None:intergenic	35.0%
	ATACTTGCCTGTGTAGTTAT+CGG	-	Chr4:29376135-29376154	MsG0480019906.01.T01:five_prime_UTR	35.0%
	ATCATCAACTTTCCCCATTA+GGG	+	Chr4:29372338-29372357	None:intergenic	35.0%
	ATTCATAAAAGGATTGCTGG+AGG	+	Chr4:29375235-29375254	None:intergenic	35.0%
	CAGAAAACTAACTCACAAAC+TGG	+	Chr4:29376180-29376199	None:intergenic	35.0%
	CCAACACAAACTATTCTCAA+TGG	+	Chr4:29372364-29372383	None:intergenic	35.0%
	GAATATGTGGAGCAGAAAAA+TGG	-	Chr4:29373208-29373227	MsG0480019906.01.T01:intron	35.0%
	GAATCTCGACTTAGATGATT+TGG	-	Chr4:29373867-29373886	MsG0480019906.01.T01:intron	35.0%
	GATGCTGACATTGTGATTAA+CGG	-	Chr4:29372712-29372731	MsG0480019906.01.T01:intron	35.0%
	GGTTCTCTTCAAAGTGTAAA+TGG	-	Chr4:29372280-29372299	MsG0480019906.01.T01:three_prime_UTR	35.0%
	GTTGTTAGAGATTATGGGTT+GGG	-	Chr4:29373723-29373742	MsG0480019906.01.T01:intron	35.0%
	GTTTACAGCTATGTTACAAG+AGG	-	Chr4:29372405-29372424	MsG0480019906.01.T01:intron	35.0%
	TAGGCCTCCCAAATAATATA+TGG	+	Chr4:29373613-29373632	None:intergenic	35.0%
	TATGCAAATGCTCGAATATG+TGG	-	Chr4:29373195-29373214	MsG0480019906.01.T01:intron	35.0%
	TGCCTTAAAAACTTTGCCAA+TGG	+	Chr4:29373240-29373259	None:intergenic	35.0%
	TGTGTAGTTATCGGTATAAC+TGG	-	Chr4:29376144-29376163	MsG0480019906.01.T01:five_prime_UTR	35.0%
	TTCATAAAAGGATTGCTGGA+GGG	+	Chr4:29375234-29375253	None:intergenic	35.0%
	TTGAGCTCCTTTCTAACAAA+TGG	+	Chr4:29374227-29374246	None:intergenic	35.0%
	TTGATATTATGCTTTGCAGC+TGG	-	Chr4:29373105-29373124	MsG0480019906.01.T01:CDS	35.0%
	TTTAACTACGGACAAAACTG+TGG	+	Chr4:29375325-29375344	None:intergenic	35.0%
!	AAAATCAGCCTTATCACACT+AGG	+	Chr4:29374180-29374199	None:intergenic	35.0%
!	AGGATCTAAGACATTTAAGC+TGG	+	Chr4:29375036-29375055	None:intergenic	35.0%
!	ATGACCATAAACTTTTGGTG+AGG	+	Chr4:29375854-29375873	None:intergenic	35.0%
!	ATTTTGCCTTCCATCTTGTA+GGG	-	Chr4:29374969-29374988	MsG0480019906.01.T01:CDS	35.0%
!	CCATTGAGAATAGTTTGTGT+TGG	-	Chr4:29372361-29372380	MsG0480019906.01.T01:three_prime_UTR	35.0%
!	CGTATTTGAAATATGTCGAG+GGG	-	Chr4:29372569-29372588	MsG0480019906.01.T01:intron	35.0%
!	CTGTTTTCTCATTCAAAGAG+AGG	+	Chr4:29375172-29375191	None:intergenic	35.0%
!	GCGTATTTGAAATATGTCGA+GGG	-	Chr4:29372568-29372587	MsG0480019906.01.T01:intron	35.0%
!	TAGTATTTTTCTTCCATGCC+GGG	-	Chr4:29373927-29373946	MsG0480019906.01.T01:intron	35.0%
!	TATTTTGCCTTCCATCTTGT+AGG	-	Chr4:29374968-29374987	MsG0480019906.01.T01:CDS	35.0%
!	TCTAAAACAACAATGGAGAG+AGG	+	Chr4:29372025-29372044	None:intergenic	35.0%
!	TGCGTATTTGAAATATGTCG+AGG	-	Chr4:29372567-29372586	MsG0480019906.01.T01:intron	35.0%
!	TTCTTTGTTGTAAATCTCGG+AGG	+	Chr4:29373175-29373194	None:intergenic	35.0%
!	TTGAGAATAGTTTGTGTTGG+AGG	-	Chr4:29372364-29372383	MsG0480019906.01.T01:three_prime_UTR	35.0%
!	TTGTTAGAGATTATGGGTTG+GGG	-	Chr4:29373724-29373743	MsG0480019906.01.T01:intron	35.0%
!!	GCAGATGAGATTTTGAAAGA+TGG	-	Chr4:29372616-29372635	MsG0480019906.01.T01:intron	35.0%
!!!	ATTGGCAAAGTTTTTAAGGC+AGG	-	Chr4:29373239-29373258	MsG0480019906.01.T01:intron	35.0%
	AAAAACCGTTCAGCAGACTT+TGG	-	Chr4:29375412-29375431	MsG0480019906.01.T01:CDS	40.0%
	AAAACCGTTCAGCAGACTTT+GGG	-	Chr4:29375413-29375432	MsG0480019906.01.T01:CDS	40.0%
	AAAGGTCGTAATGCATGGTA+TGG	-	Chr4:29374804-29374823	MsG0480019906.01.T01:intron	40.0%
	AAATATGTCGAGGGGAGATT+AGG	-	Chr4:29372577-29372596	MsG0480019906.01.T01:intron	40.0%
	AAATCATCTCTGATGTGCAG+TGG	+	Chr4:29374707-29374726	None:intergenic	40.0%
	AACAGAAGAAACAGTATGGG+TGG	+	Chr4:29371916-29371935	None:intergenic	40.0%
	AACATGCATTCAAATGCTCG+AGG	+	Chr4:29373003-29373022	None:intergenic	40.0%
	AATCATCTCTGATGTGCAGT+GGG	+	Chr4:29374706-29374725	None:intergenic	40.0%
	ACAGAAGAAACAGTATGGGT+GGG	+	Chr4:29371915-29371934	None:intergenic	40.0%
	ACATAAGTATCAGCCAAGAG+AGG	+	Chr4:29374774-29374793	None:intergenic	40.0%
	ACATGCATTCAAATGCTCGA+GGG	+	Chr4:29373002-29373021	None:intergenic	40.0%
	ACGAACCAATCATTGAAGCT+AGG	+	Chr4:29374397-29374416	None:intergenic	40.0%
	AGGAGAATTGAGCCTTGAAA+TGG	-	Chr4:29374842-29374861	MsG0480019906.01.T01:CDS	40.0%
	ATGAGCTTAGAACCCTAATG+GGG	-	Chr4:29372323-29372342	MsG0480019906.01.T01:three_prime_UTR	40.0%
	ATGATTGCGTTAGAGAGAGT+TGG	-	Chr4:29373816-29373835	MsG0480019906.01.T01:intron	40.0%
	ATGGAAGAACTAGACGAGAT+AGG	-	Chr4:29373786-29373805	MsG0480019906.01.T01:intron	40.0%
	ATTAGGATATGGAGAAGACC+AGG	-	Chr4:29372457-29372476	MsG0480019906.01.T01:CDS	40.0%
	CAACTTTGTTGGAGGAATTC+TGG	+	Chr4:29376040-29376059	None:intergenic	40.0%
	CATAAGTATCAGCCAAGAGA+GGG	+	Chr4:29374773-29374792	None:intergenic	40.0%
	CATCATCAACTTTCCCCATT+AGG	+	Chr4:29372339-29372358	None:intergenic	40.0%
	CTCTCTAACGCAATCATTTC+TGG	+	Chr4:29373813-29373832	None:intergenic	40.0%
	GAATTTGCAGGAAGCTGTAT+GGG	-	Chr4:29372690-29372709	MsG0480019906.01.T01:intron	40.0%
	GACTTAAACATCAGTACGCT+TGG	-	Chr4:29371873-29371892	MsG0480019906.01.T01:three_prime_UTR	40.0%
	GATGAGCTTAGAACCCTAAT+GGG	-	Chr4:29372322-29372341	MsG0480019906.01.T01:three_prime_UTR	40.0%
	GCTATGTTACAAGAGGCTTA+TGG	-	Chr4:29372412-29372431	MsG0480019906.01.T01:intron	40.0%
	GGAGAATTGAGCCTTGAAAT+GGG	-	Chr4:29374843-29374862	MsG0480019906.01.T01:CDS	40.0%
	GGATCAAAGATGAACCATCA+TGG	-	Chr4:29372247-29372266	MsG0480019906.01.T01:three_prime_UTR	40.0%
	GGCTCTGTGCAATCTTAATA+CGG	+	Chr4:29375706-29375725	None:intergenic	40.0%
	GGTTGTTAGAGATTATGGGT+TGG	-	Chr4:29373722-29373741	MsG0480019906.01.T01:intron	40.0%
	GTTACTCATGAAGTTATGGG+TGG	-	Chr4:29373294-29373313	MsG0480019906.01.T01:CDS	40.0%
	TAAATCTCGGAGGCAATGTT+AGG	+	Chr4:29373165-29373184	None:intergenic	40.0%
	TACCAAGACAACTTTGTTGG+AGG	+	Chr4:29376048-29376067	None:intergenic	40.0%
	TATGGACAAAAGTTGGCCAA+AGG	-	Chr4:29374822-29374841	MsG0480019906.01.T01:intron	40.0%
	TATGTGGAGCAGAAAAATGG+AGG	-	Chr4:29373211-29373230	MsG0480019906.01.T01:intron	40.0%
	TGAAGTGATTAATTCGAGGG+AGG	-	Chr4:29372516-29372535	MsG0480019906.01.T01:CDS	40.0%
	TGATGAGCTTAGAACCCTAA+TGG	-	Chr4:29372321-29372340	MsG0480019906.01.T01:three_prime_UTR	40.0%
	TGCATGGTATGGACAAAAGT+TGG	-	Chr4:29374815-29374834	MsG0480019906.01.T01:intron	40.0%
	TGCATTACGACCTTTCAACA+AGG	+	Chr4:29374799-29374818	None:intergenic	40.0%
	TGGAAGAACTAGACGAGATA+GGG	-	Chr4:29373787-29373806	MsG0480019906.01.T01:intron	40.0%
	TGGTTGAGCTAAGGGATTAA+AGG	+	Chr4:29373983-29374002	None:intergenic	40.0%
	TGTTGAAAGGTCGTAATGCA+TGG	-	Chr4:29374799-29374818	MsG0480019906.01.T01:intron	40.0%
	TTAGAATCCTCGTCTCTTGT+GGG	-	Chr4:29375763-29375782	MsG0480019906.01.T01:CDS	40.0%
	TTCAAGGCTCAATTCTCCTT+TGG	+	Chr4:29374841-29374860	None:intergenic	40.0%
	TTCCTCCAACAAAGTTGTCT+TGG	-	Chr4:29376043-29376062	MsG0480019906.01.T01:five_prime_UTR	40.0%
	TTGAGCTAAGGGATTAAAGG+AGG	+	Chr4:29373980-29373999	None:intergenic	40.0%
	TTGGTTGTGTCTATTGGTAC+TGG	-	Chr4:29376007-29376026	MsG0480019906.01.T01:intron	40.0%
	TTGTGGACCTCTTATCTTCA+GGG	-	Chr4:29375619-29375638	MsG0480019906.01.T01:CDS	40.0%
	TTTGTGGACCTCTTATCTTC+AGG	-	Chr4:29375618-29375637	MsG0480019906.01.T01:CDS	40.0%
!	AAGGTCAGTGATTTGGATAG+TGG	-	Chr4:29374096-29374115	MsG0480019906.01.T01:intron	40.0%
!	ACCATAAACTTTTGGTGAGG+TGG	+	Chr4:29375851-29375870	None:intergenic	40.0%
!	AGAATAGTTTGTGTTGGAGG+TGG	-	Chr4:29372367-29372386	MsG0480019906.01.T01:three_prime_UTR	40.0%
!	ATGTGTTGAGGAGGTTGATT+AGG	-	Chr4:29372539-29372558	MsG0480019906.01.T01:intron	40.0%
!	CCATAAACTTTTGGTGAGGT+GGG	+	Chr4:29375850-29375869	None:intergenic	40.0%
!	CTTCACCCCTCTAATCTTTT+AGG	+	Chr4:29373632-29373651	None:intergenic	40.0%
!	GATGATCGATTTAACAGGGA+TGG	-	Chr4:29374632-29374651	MsG0480019906.01.T01:intron	40.0%
!	TATTTCATTGGCTAAGGGTG+TGG	-	Chr4:29372813-29372832	MsG0480019906.01.T01:intron	40.0%
!!	AAAGTAGACTGATTTGCTGG+TGG	+	Chr4:29374682-29374701	None:intergenic	40.0%
!!	AAGTGCCGTTCTTTTAAGCT+AGG	+	Chr4:29373676-29373695	None:intergenic	40.0%
!!	ATTTGTTGGTGTGGTGTCAT+TGG	-	Chr4:29372221-29372240	MsG0480019906.01.T01:three_prime_UTR	40.0%
!!	GATGATTTGGGTTTTTGTGG+AGG	-	Chr4:29373880-29373899	MsG0480019906.01.T01:intron	40.0%
!!	GCAACATGCTTGTTTTCATC+AGG	+	Chr4:29375056-29375075	None:intergenic	40.0%
!!	GCAAGCTTAATTTGTTGGTG+TGG	-	Chr4:29372212-29372231	MsG0480019906.01.T01:three_prime_UTR	40.0%
!!	TCGAAGGTATTAACCGCTTT+GGG	+	Chr4:29375393-29375412	None:intergenic	40.0%
!!	TTCGAAGGTATTAACCGCTT+TGG	+	Chr4:29375394-29375413	None:intergenic	40.0%
	ACAACCTTCAAAGGGCAAAC+AGG	+	Chr4:29372667-29372686	None:intergenic	45.0%
	AGCTCACTTGGTTGAGCTAA+GGG	+	Chr4:29373991-29374010	None:intergenic	45.0%
	ATTCAGGCAAACTTCAGCGA+AGG	-	Chr4:29376088-29376107	MsG0480019906.01.T01:five_prime_UTR	45.0%
	CACAAGAGACGAGGATTCTA+AGG	+	Chr4:29375764-29375783	None:intergenic	45.0%
	CAGGAGCTCAAAAGTTAGGT+AGG	+	Chr4:29375491-29375510	None:intergenic	45.0%
	CCCACCTCACCAAAAGTTTA+TGG	-	Chr4:29375847-29375866	MsG0480019906.01.T01:CDS	45.0%
	CGAATTTGCAGGAAGCTGTA+TGG	-	Chr4:29372689-29372708	MsG0480019906.01.T01:intron	45.0%
	CTTAGAATCCTCGTCTCTTG+TGG	-	Chr4:29375762-29375781	MsG0480019906.01.T01:CDS	45.0%
	CTTATCACACTAGGTGGGAT+CGG	+	Chr4:29374171-29374190	None:intergenic	45.0%
	GAAATGGGTGACAGCATCAA+GGG	-	Chr4:29374858-29374877	MsG0480019906.01.T01:CDS	45.0%
	GAAGAACCAGAGAAACTTGC+AGG	-	Chr4:29374747-29374766	MsG0480019906.01.T01:intron	45.0%
	GAAGGTTGTGACGAATTTGC+AGG	-	Chr4:29372678-29372697	MsG0480019906.01.T01:intron	45.0%
	GCAATCTTAATACGGTCTCG+AGG	+	Chr4:29375698-29375717	None:intergenic	45.0%
	GCTTGAAGTATAGCCTGTAC+TGG	+	Chr4:29375650-29375669	None:intergenic	45.0%
	GGAGATTCCCTGAAGATAAG+AGG	+	Chr4:29375629-29375648	None:intergenic	45.0%
	GGAGGCCTAAAAGATTAGAG+GGG	-	Chr4:29373624-29373643	MsG0480019906.01.T01:intron	45.0%
	GGGAGGCCTAAAAGATTAGA+GGG	-	Chr4:29373623-29373642	MsG0480019906.01.T01:intron	45.0%
	TACACCTGTTTGCCCTTTGA+AGG	-	Chr4:29372660-29372679	MsG0480019906.01.T01:intron	45.0%
	TAGCTCACTTGGTTGAGCTA+AGG	+	Chr4:29373992-29374011	None:intergenic	45.0%
	TGAAATGGGTGACAGCATCA+AGG	-	Chr4:29374857-29374876	MsG0480019906.01.T01:CDS	45.0%
	TGATCCCAAAGTCTGCTGAA+CGG	+	Chr4:29375420-29375439	None:intergenic	45.0%
	TGATGCTGTCACCCATTTCA+AGG	+	Chr4:29374857-29374876	None:intergenic	45.0%
	TGGGAGGCCTAAAAGATTAG+AGG	-	Chr4:29373622-29373641	MsG0480019906.01.T01:intron	45.0%
	TTCAAACAAATGCGTAGCCG+TGG	+	Chr4:29372500-29372519	None:intergenic	45.0%
!	AAGAGCTGTTGATAGAGCCA+CGG	-	Chr4:29372480-29372499	MsG0480019906.01.T01:CDS	45.0%
!	ATCAGCCTTATCACACTAGG+TGG	+	Chr4:29374177-29374196	None:intergenic	45.0%
!	CACAGAGCCATGTGTTTTAC+CGG	-	Chr4:29375717-29375736	MsG0480019906.01.T01:CDS	45.0%
!	CAGATGAACCTGAGCTTTAG+CGG	-	Chr4:29375189-29375208	MsG0480019906.01.T01:intron	45.0%
!	TAAACTTTTGGTGAGGTGGG+AGG	+	Chr4:29375847-29375866	None:intergenic	45.0%
!	TCAGCCTTATCACACTAGGT+GGG	+	Chr4:29374176-29374195	None:intergenic	45.0%
!	TTTTACCGGCCATCTCTTCT+TGG	-	Chr4:29375731-29375750	MsG0480019906.01.T01:CDS	45.0%
!!	ATTATGGGTTGGGGATGAGT+AGG	-	Chr4:29373733-29373752	MsG0480019906.01.T01:intron	45.0%
!!	GGCAAAGTAGACTGATTTGC+TGG	+	Chr4:29374685-29374704	None:intergenic	45.0%
!!	TCTGCTGAACGGTTTTTCGA+AGG	+	Chr4:29375409-29375428	None:intergenic	45.0%
!!	TTATGGGTTGGGGATGAGTA+GGG	-	Chr4:29373734-29373753	MsG0480019906.01.T01:intron	45.0%
!!	TTGGTGTGGTGTCATTGGTT+GGG	-	Chr4:29372226-29372245	MsG0480019906.01.T01:three_prime_UTR	45.0%
!!	TATATAAAATACTAATATTA+AGG	-	Chr4:29375108-29375127	MsG0480019906.01.T01:intron	5.0%
	AAGATGGGACAAAGCTCGAC+AGG	+	Chr4:29375080-29375099	None:intergenic	50.0%
	AGATGGGACAAAGCTCGACA+GGG	+	Chr4:29375079-29375098	None:intergenic	50.0%
	AGCAGAGACTCCCTACAAGA+TGG	+	Chr4:29374982-29375001	None:intergenic	50.0%
	AGTATGGGTGGGTGTGTTGT+CGG	+	Chr4:29371904-29371923	None:intergenic	50.0%
	ATTCGAGGGAGGATGTGTTG+AGG	-	Chr4:29372527-29372546	MsG0480019906.01.T01:CDS	50.0%
	CGAGGGGAGATTAGGTGATA+GGG	-	Chr4:29372585-29372604	MsG0480019906.01.T01:intron	50.0%
	CGATCCCACCTAGTGTGATA+AGG	-	Chr4:29374169-29374188	MsG0480019906.01.T01:intron	50.0%
	CTTCAGGGAATCTCCAGTAC+AGG	-	Chr4:29375634-29375653	MsG0480019906.01.T01:CDS	50.0%
	GAACAGCGGTTCAACAGACT+CGG	+	Chr4:29375270-29375289	None:intergenic	50.0%
	GAGACTCCCTACAAGATGGA+AGG	+	Chr4:29374978-29374997	None:intergenic	50.0%
	GAGATGGCCGGTAAAACACA+TGG	+	Chr4:29375727-29375746	None:intergenic	50.0%
	GCAGGCGCACTTTATAGTGT+GGG	-	Chr4:29373257-29373276	MsG0480019906.01.T01:intron	50.0%
	GCTCGACTGATCATTAGCGT+AGG	+	Chr4:29372874-29372893	None:intergenic	50.0%
	GCTCTATCAACAGCTCTTCC+TGG	+	Chr4:29372478-29372497	None:intergenic	50.0%
	GGCTTACACAAGACCCAAAG+CGG	-	Chr4:29375377-29375396	MsG0480019906.01.T01:CDS	50.0%
	GGGGGTAACTCAACCATTAG+AGG	-	Chr4:29374024-29374043	MsG0480019906.01.T01:intron	50.0%
	TAATGGTTGAGTTACCCCCC+CGG	+	Chr4:29374023-29374042	None:intergenic	50.0%
	TCACGATTAGAATCCCGGCA+TGG	+	Chr4:29373943-29373962	None:intergenic	50.0%
	TCGAGGGGAGATTAGGTGAT+AGG	-	Chr4:29372584-29372603	MsG0480019906.01.T01:intron	50.0%
	TGCAAAACCCACAAGAGACG+AGG	+	Chr4:29375773-29375792	None:intergenic	50.0%
	TTGTGTTGGAGGTGGTGCTT+GGG	-	Chr4:29372375-29372394	MsG0480019906.01.T01:three_prime_UTR	50.0%
	TTTGTGTTGGAGGTGGTGCT+TGG	-	Chr4:29372374-29372393	MsG0480019906.01.T01:three_prime_UTR	50.0%
!	AGCGTAGGTGTTATGATCCG+CGG	+	Chr4:29372859-29372878	None:intergenic	50.0%
!	TAAGGGTGTGGAGGCTGAAT+TGG	-	Chr4:29372825-29372844	MsG0480019906.01.T01:intron	50.0%
!	TTCATTGGCTAAGGGTGTGG+AGG	-	Chr4:29372816-29372835	MsG0480019906.01.T01:intron	50.0%
!	TTTTGAGCTCCTGCGCCAAT+AGG	-	Chr4:29375498-29375517	MsG0480019906.01.T01:CDS	50.0%
!!	GTTGGTGTGGTGTCATTGGT+TGG	-	Chr4:29372225-29372244	MsG0480019906.01.T01:three_prime_UTR	50.0%
	AAGTGAGCTACTCATCCCCC+GGG	-	Chr4:29374002-29374021	MsG0480019906.01.T01:intron	55.0%
	AATGGTTGAGTTACCCCCCC+GGG	+	Chr4:29374022-29374041	None:intergenic	55.0%
	ACCTCACGGGTTTCTGTCGA+TGG	+	Chr4:29372742-29372761	None:intergenic	55.0%
	ACGGTCTCGAGGATCGTTCA+TGG	+	Chr4:29375687-29375706	None:intergenic	55.0%
	ACTAGGTGGGATCGGCTACA+TGG	+	Chr4:29374163-29374182	None:intergenic	55.0%
	AGAGGGCCTGCAAGTTTCTC+TGG	+	Chr4:29374756-29374775	None:intergenic	55.0%
	CAAGGGCAAGGGGATGATTC+AGG	-	Chr4:29374875-29374894	MsG0480019906.01.T01:CDS	55.0%
	CAAGTGAGCTACTCATCCCC+CGG	-	Chr4:29374001-29374020	MsG0480019906.01.T01:intron	55.0%
	CACTTGAGCCGCTAAAGCTC+AGG	+	Chr4:29375200-29375219	None:intergenic	55.0%
	CGGTTCAACAGACTCGGAGT+TGG	+	Chr4:29375264-29375283	None:intergenic	55.0%
	GAAACTTGCAGGCCCTCTCT+TGG	-	Chr4:29374758-29374777	MsG0480019906.01.T01:intron	55.0%
	GATGGGACAAAGCTCGACAG+GGG	+	Chr4:29375078-29375097	None:intergenic	55.0%
	GCTGACCAAGAAGAGATGGC+CGG	+	Chr4:29375739-29375758	None:intergenic	55.0%
	GGCAGGCGCACTTTATAGTG+TGG	-	Chr4:29373256-29373275	MsG0480019906.01.T01:intron	55.0%
	GGCGCAGGAGCTCAAAAGTT+AGG	+	Chr4:29375495-29375514	None:intergenic	55.0%
	GGCTGCTGACCAAGAAGAGA+TGG	+	Chr4:29375743-29375762	None:intergenic	55.0%
	GGTGACAGCATCAAGGGCAA+GGG	-	Chr4:29374864-29374883	MsG0480019906.01.T01:CDS	55.0%
	GTGACAGCATCAAGGGCAAG+GGG	-	Chr4:29374865-29374884	MsG0480019906.01.T01:CDS	55.0%
	TGTGTTGGAGGTGGTGCTTG+GGG	-	Chr4:29372376-29372395	MsG0480019906.01.T01:three_prime_UTR	55.0%
!	CTGAATTGGTTCCTGAGCCG+CGG	-	Chr4:29372839-29372858	MsG0480019906.01.T01:intron	55.0%
	AGTGAGCTACTCATCCCCCG+GGG	-	Chr4:29374003-29374022	MsG0480019906.01.T01:intron	60.0%
	ATGGTTGAGTTACCCCCCCG+GGG	+	Chr4:29374021-29374040	None:intergenic	60.0%
	CGAGGGAGGATGTGTTGAGG+AGG	-	Chr4:29372530-29372549	MsG0480019906.01.T01:intron	60.0%
	CGGGGGATGAGTAGCTCACT+TGG	+	Chr4:29374003-29374022	None:intergenic	60.0%
	GCCATCGACAGAAACCCGTG+AGG	-	Chr4:29372738-29372757	MsG0480019906.01.T01:intron	60.0%
	GGGTGACAGCATCAAGGGCA+AGG	-	Chr4:29374863-29374882	MsG0480019906.01.T01:CDS	60.0%
!	GGTGTTATGATCCGCGGCTC+AGG	+	Chr4:29372853-29372872	None:intergenic	60.0%
	GTGAGCTACTCATCCCCCGG+GGG	-	Chr4:29374004-29374023	MsG0480019906.01.T01:intron	65.0%
	TGAGCTACTCATCCCCCGGG+GGG	-	Chr4:29374005-29374024	MsG0480019906.01.T01:intron	65.0%
	TGGTTGAGTTACCCCCCCGG+GGG	+	Chr4:29374020-29374039	None:intergenic	65.0%
	GAGCTACTCATCCCCCGGGG+GGG	-	Chr4:29374006-29374025	MsG0480019906.01.T01:intron	70.0%

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	29371848	29376338	29371848	ID=MsG0480019906.01;Name=MsG0480019906.01
Chr4	mRNA	29371848	29376208	29371848	ID=MsG0480019906.01.T01;Parent=MsG0480019906.01;Name=MsG0480019906.01.T01;_AED=0.28;_eAED=0.28;_QI=258\|1\|1\|1\|0.8\|0.66\|6\|572\|458
Chr4	exon	29375291	29376022	29375291	ID=MsG0480019906.01.T01:exon:12258;Parent=MsG0480019906.01.T01
Chr4	exon	29376043	29376208	29376043	ID=MsG0480019906.01.T01:exon:12257;Parent=MsG0480019906.01.T01
Chr4	five_prime_UTR	29376043	29376208	29376043	ID=MsG0480019906.01.T01:five_prime_utr;Parent=MsG0480019906.01.T01
Chr4	five_prime_UTR	29375931	29376022	29375931	ID=MsG0480019906.01.T01:five_prime_utr;Parent=MsG0480019906.01.T01
Chr4	CDS	29375291	29375930	29375291	ID=MsG0480019906.01.T01:cds;Parent=MsG0480019906.01.T01
Chr4	CDS	29374841	29375062	29374841	ID=MsG0480019906.01.T01:cds;Parent=MsG0480019906.01.T01
Chr4	CDS	29373290	29373537	29373290	ID=MsG0480019906.01.T01:cds;Parent=MsG0480019906.01.T01
Chr4	CDS	29373057	29373196	29373057	ID=MsG0480019906.01.T01:cds;Parent=MsG0480019906.01.T01
Chr4	CDS	29372420	29372546	29372420	ID=MsG0480019906.01.T01:cds;Parent=MsG0480019906.01.T01
Chr4	three_prime_UTR	29371848	29372419	29371848	ID=MsG0480019906.01.T01:three_prime_utr;Parent=MsG0480019906.01.T01
Chr4	mRNA	29371848	29376338	29371848	ID=MsG0480019906.01.T02;Parent=MsG0480019906.01;Name=MsG0480019906.01.T02;_AED=0.27;_eAED=0.27;_QI=408\|1\|1\|1\|1\|1\|5\|572\|458
Chr4	exon	29375291	29376338	29375291	ID=MsG0480019906.01.T02:exon:12263;Parent=MsG0480019906.01.T02
Chr4	five_prime_UTR	29375931	29376338	29375931	ID=MsG0480019906.01.T02:five_prime_utr;Parent=MsG0480019906.01.T02
Chr4	CDS	29375291	29375930	29375291	ID=MsG0480019906.01.T02:cds;Parent=MsG0480019906.01.T02
Chr4	CDS	29374841	29375062	29374841	ID=MsG0480019906.01.T02:cds;Parent=MsG0480019906.01.T02
Chr4	CDS	29373290	29373537	29373290	ID=MsG0480019906.01.T02:cds;Parent=MsG0480019906.01.T02
Chr4	CDS	29373057	29373196	29373057	ID=MsG0480019906.01.T02:cds;Parent=MsG0480019906.01.T02
Chr4	CDS	29372420	29372546	29372420	ID=MsG0480019906.01.T02:cds;Parent=MsG0480019906.01.T02
Chr4	three_prime_UTR	29371848	29372419	29371848	ID=MsG0480019906.01.T02:three_prime_utr;Parent=MsG0480019906.01.T02

Gene Sequence

>MsG0480019906.01.T02

ATGAACCATCATGGATACTCAAATGGTTCTCTTCAAAGTGTAAATGGTAATTTTGAAGAGAAGCTTGATGAGCTTAGAACCCTAATGGGGAAAGTTGATGATGATCCATTGAGAATAGTTTGTGTTGGAGGTGGTGCTTGGGGTAGTGTGTTTACAGCTATGTTACAAGAGGCTTATGGTAGTTTTAGAGACAAGGTTTTGATTAGGATATGGAGAAGACCAGGAAGAGCTGTTGATAGAGCCACGGCTACGCATTTGTTTGAAGTGATTAATTCGAGGGAGGATGTGTTGAGGAGGTTGATTAGGCGTTGTGCGTATTTGAAATATGTCGAGGGGAGATTAGGTGATAGGGTTCTTCATGCAGATGAGATTTTGAAAGATGGGTTTTGTTTGAATATGGTTGATACACCTGTTTGCCCTTTGAAGGTTGTGACGAATTTGCAGGAAGCTGTATGGGATGCTGACATTGTGATTAACGGTTTGCCATCGACAGAAACCCGTGAGGTGTTTGAAGAAATTAGTAAGTATTGGAAAGAGAGAATCACAGTTCCTGTCATTATTTCATTGGCTAAGGGTGTGGAGGCTGAATTGGTTCCTGAGCCGCGGATCATAACACCTACGCTAATGATCAGTCGAGCAACTGGAGTCCCCATTGAAAATATTCTCTATCTTGGAGGTCCTAACATTGCCTCCGAGATTTACAACAAAGAATATGCAAATGCTCGAATATGTGGAGCAGAAAAATGGAGGAAACCATTGGCAAAGTTTTTAAGGCAGGCGCACTTTATAGTGTGGGATAATGTTGATCTTGTTACTCATGAAGTTATGGGTGGATTAAAGAATGTATATGCTATTGGAGCAGGGATGGTAGCTGCTTTGACGAATGAAAGTGCCACCAGCAAATCAGTCTACTTTGCCCACTGCACATCAGAGATGATTTTTATCACTCATCTATTGGCAGAAGAACCAGAGAAACTTGCAGGCCCTCTCTTGGCTGATACTTATGTAACCTTGTTGAAAGGTCGTAATGCATGGTATGGACAAAAGTTGGCCAAAGGAGAATTGAGCCTTGAAATGGGTGACAGCATCAAGGGCAAGGGGATGATTCAGGGAGTCTCTGCTGTTAAAGCATTCTATGAGCTACTGAGTCTGTCCAGCTTAAATGTCTTAGATCCTGATGAAAACAAGCATGTTGCCCCTGTCGAGCTTTGTCCCATCTTGAAGATGTTATATAAAATACTAATATTAAGGGAATCTCCAGTACAGGCTATACTTCAAGCATTACGAGATGAGACCATGAACGATCCTCGAGACCGTATTAAGATTGCACAGAGCCATGTGTTTTACCGGCCATCTCTTCTTGGTCAGCAGCCTTAG

>MsG0480019906.01.T01

Protein sequence

>MsG0480019906.01.T02

MNHHGYSNGSLQSVNGNFEEKLDELRTLMGKVDDDPLRIVCVGGGAWGSVFTAMLQEAYGSFRDKVLIRIWRRPGRAVDRATATHLFEVINSREDVLRRLIRRCAYLKYVEGRLGDRVLHADEILKDGFCLNMVDTPVCPLKVVTNLQEAVWDADIVINGLPSTETREVFEEISKYWKERITVPVIISLAKGVEAELVPEPRIITPTLMISRATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRQAHFIVWDNVDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQKLAKGELSLEMGDSIKGKGMIQGVSAVKAFYELLSLSSLNVLDPDENKHVAPVELCPILKMLYKILILRESPVQAILQALRDETMNDPRDRIKIAQSHVFYRPSLLGQQP*

>MsG0480019906.01.T01