Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024466.01.T01 | XP_003611216.1 | 82.474 | 485 | 11 | 2 | 7 | 417 | 27 | 511 | 0 | 754 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024466.01.T01 | O49660 | 49.16 | 476 | 164 | 4 | 2 | 399 | 5 | 480 | 5.79E-148 | 432 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024466.01.T01 | G7KG46 | 82.474 | 485 | 11 | 2 | 7 | 417 | 27 | 511 | 0.0 | 754 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000440.01 | MsG0580024466.01 | 0.809840 | 1.551256e-50 | 9.205555e-48 |
| MsG0380012658.01 | MsG0580024466.01 | 0.803835 | 2.884357e-49 | 1.464335e-46 |
| MsG0580024466.01 | MsG0680030719.01 | 0.806701 | 7.238664e-50 | 3.955434e-47 |
| MsG0580024466.01 | MsG0880044715.01 | -0.803305 | 3.714389e-49 | 1.860134e-46 |
| MsG0580024466.01 | MsG0880046148.01 | 0.805602 | 1.233478e-49 | 6.553093e-47 |
| MsG0380017579.01 | MsG0580024466.01 | 0.824126 | 9.557642e-54 | 8.390645e-51 |
| MsG0280009398.01 | MsG0580024466.01 | 0.825275 | 5.122899e-54 | 4.647916e-51 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0580024466.01 | MsG0580024415.01 | PPI |
| MsG0480019290.01 | MsG0580024466.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024466.01.T01 | MTR_5g011540 | 82.474 | 485 | 11 | 2 | 7 | 417 | 27 | 511 | 0.0 | 754 |
| MsG0580024466.01.T01 | MTR_5g010830 | 36.132 | 393 | 225 | 2 | 5 | 371 | 47 | 439 | 5.01e-78 | 251 |
| MsG0580024466.01.T01 | MTR_1g101500 | 38.308 | 402 | 211 | 4 | 5 | 371 | 39 | 438 | 8.64e-78 | 251 |
| MsG0580024466.01.T01 | MTR_0039s0080 | 36.041 | 394 | 226 | 3 | 4 | 371 | 19 | 412 | 1.13e-77 | 250 |
| MsG0580024466.01.T01 | MTR_5g067460 | 36.364 | 374 | 212 | 3 | 24 | 371 | 56 | 429 | 1.38e-77 | 251 |
| MsG0580024466.01.T01 | MTR_6g043810 | 36.667 | 390 | 213 | 3 | 16 | 371 | 26 | 415 | 5.88e-77 | 248 |
| MsG0580024466.01.T01 | MTR_6g043810 | 36.667 | 390 | 213 | 3 | 16 | 371 | 16 | 405 | 6.51e-77 | 247 |
| MsG0580024466.01.T01 | MTR_3g111020 | 36.816 | 402 | 221 | 5 | 1 | 371 | 26 | 425 | 8.69e-77 | 248 |
| MsG0580024466.01.T01 | MTR_6g088805 | 34.555 | 382 | 227 | 4 | 13 | 371 | 17 | 398 | 5.54e-69 | 226 |
| MsG0580024466.01.T01 | MTR_4g027920 | 32.808 | 381 | 228 | 1 | 21 | 373 | 154 | 534 | 1.78e-67 | 226 |
| MsG0580024466.01.T01 | MTR_8g102430 | 34.048 | 373 | 204 | 4 | 23 | 371 | 23 | 377 | 3.46e-64 | 213 |
| MsG0580024466.01.T01 | MTR_2g435930 | 31.401 | 414 | 226 | 6 | 8 | 371 | 4 | 409 | 9.85e-60 | 202 |
| MsG0580024466.01.T01 | MTR_1g108810 | 32.316 | 393 | 239 | 3 | 2 | 367 | 12 | 404 | 1.02e-57 | 196 |
| MsG0580024466.01.T01 | MTR_6g081410 | 33.756 | 394 | 223 | 5 | 7 | 367 | 9 | 397 | 2.65e-53 | 185 |
| MsG0580024466.01.T01 | MTR_6g081810 | 33.508 | 382 | 230 | 7 | 1 | 370 | 1 | 370 | 5.16e-53 | 183 |
| MsG0580024466.01.T01 | MTR_6g081780 | 31.980 | 394 | 230 | 4 | 7 | 367 | 9 | 397 | 5.67e-50 | 176 |
| MsG0580024466.01.T01 | MTR_1g108840 | 30.769 | 377 | 223 | 4 | 23 | 367 | 41 | 411 | 2.74e-49 | 174 |
| MsG0580024466.01.T01 | MTR_2g078930 | 29.843 | 382 | 230 | 4 | 18 | 367 | 38 | 413 | 1.75e-46 | 167 |
| MsG0580024466.01.T01 | MTR_6g004220 | 32.383 | 386 | 231 | 7 | 10 | 367 | 11 | 394 | 1.83e-46 | 166 |
| MsG0580024466.01.T01 | MTR_6g004220 | 32.383 | 386 | 231 | 7 | 10 | 367 | 18 | 401 | 2.11e-46 | 167 |
| MsG0580024466.01.T01 | MTR_6g004220 | 33.243 | 367 | 215 | 7 | 10 | 348 | 18 | 382 | 3.67e-46 | 165 |
| MsG0580024466.01.T01 | MTR_7g082810 | 30.280 | 393 | 234 | 7 | 10 | 369 | 7 | 392 | 4.21e-46 | 166 |
| MsG0580024466.01.T01 | MTR_8g106670 | 30.239 | 377 | 235 | 5 | 18 | 367 | 7 | 382 | 8.19e-46 | 165 |
| MsG0580024466.01.T01 | MTR_6g066380 | 31.081 | 370 | 223 | 3 | 31 | 370 | 35 | 402 | 1.25e-44 | 162 |
| MsG0580024466.01.T01 | MTR_2g079020 | 29.843 | 382 | 230 | 6 | 18 | 367 | 32 | 407 | 6.87e-44 | 160 |
| MsG0580024466.01.T01 | MTR_2g078960 | 30.053 | 376 | 237 | 3 | 18 | 367 | 28 | 403 | 3.15e-42 | 155 |
| MsG0580024466.01.T01 | MTR_6g081300 | 29.412 | 374 | 232 | 4 | 23 | 367 | 10 | 380 | 3.49e-41 | 152 |
| MsG0580024466.01.T01 | MTR_2g078970 | 29.396 | 381 | 231 | 4 | 18 | 366 | 26 | 400 | 7.85e-40 | 149 |
| MsG0580024466.01.T01 | MTR_6g081400 | 28.000 | 375 | 243 | 2 | 21 | 368 | 13 | 387 | 6.74e-39 | 145 |
| MsG0580024466.01.T01 | MTR_6g081310 | 29.640 | 361 | 210 | 6 | 48 | 367 | 21 | 378 | 1.10e-37 | 142 |
| MsG0580024466.01.T01 | MTR_2g088400 | 27.979 | 386 | 244 | 5 | 24 | 380 | 53 | 433 | 4.06e-37 | 140 |
| MsG0580024466.01.T01 | MTR_2g022980 | 27.273 | 418 | 258 | 7 | 3 | 380 | 18 | 429 | 5.30e-37 | 141 |
| MsG0580024466.01.T01 | MTR_2g088400 | 27.979 | 386 | 244 | 5 | 24 | 380 | 53 | 433 | 8.34e-37 | 140 |
| MsG0580024466.01.T01 | MTR_6g081390 | 28.125 | 384 | 231 | 6 | 21 | 368 | 10 | 384 | 1.51e-36 | 139 |
| MsG0580024466.01.T01 | MTR_6g004220 | 34.130 | 293 | 163 | 7 | 10 | 274 | 18 | 308 | 1.99e-35 | 133 |
| MsG0580024466.01.T01 | MTR_1g108990 | 29.839 | 372 | 233 | 4 | 23 | 367 | 25 | 395 | 7.47e-35 | 135 |
| MsG0580024466.01.T01 | MTR_4g048000 | 27.132 | 387 | 246 | 4 | 24 | 380 | 65 | 445 | 1.78e-34 | 134 |
| MsG0580024466.01.T01 | MTR_1g109060 | 28.267 | 375 | 239 | 3 | 23 | 369 | 24 | 396 | 2.30e-33 | 130 |
| MsG0580024466.01.T01 | MTR_1g109060 | 28.267 | 375 | 239 | 3 | 23 | 369 | 24 | 396 | 2.60e-33 | 130 |
| MsG0580024466.01.T01 | MTR_7g082800 | 29.968 | 317 | 186 | 4 | 82 | 367 | 1 | 312 | 3.13e-33 | 129 |
| MsG0580024466.01.T01 | MTR_6g081240 | 28.571 | 378 | 230 | 7 | 23 | 367 | 10 | 380 | 9.05e-33 | 128 |
| MsG0580024466.01.T01 | MTR_1g021740 | 26.044 | 407 | 264 | 7 | 5 | 380 | 15 | 415 | 3.17e-31 | 125 |
| MsG0580024466.01.T01 | MTR_5g032720 | 26.344 | 372 | 247 | 4 | 34 | 380 | 47 | 416 | 2.05e-28 | 117 |
| MsG0580024466.01.T01 | MTR_5g033100 | 27.518 | 407 | 247 | 9 | 3 | 367 | 25 | 425 | 2.38e-27 | 114 |
| MsG0580024466.01.T01 | MTR_6g027200 | 28.226 | 372 | 238 | 6 | 23 | 367 | 36 | 405 | 4.91e-26 | 110 |
| MsG0580024466.01.T01 | MTR_8g063590 | 25.698 | 358 | 231 | 5 | 43 | 369 | 73 | 426 | 1.08e-25 | 109 |
| MsG0580024466.01.T01 | MTR_6g027190 | 27.957 | 372 | 239 | 7 | 23 | 367 | 24 | 393 | 2.86e-25 | 107 |
| MsG0580024466.01.T01 | MTR_8g069470 | 26.842 | 380 | 244 | 8 | 17 | 367 | 45 | 419 | 5.23e-25 | 107 |
| MsG0580024466.01.T01 | MTR_7g087400 | 26.494 | 385 | 247 | 5 | 13 | 367 | 20 | 398 | 1.10e-24 | 106 |
| MsG0580024466.01.T01 | MTR_1g100180 | 24.422 | 389 | 263 | 6 | 18 | 380 | 39 | 422 | 1.98e-24 | 105 |
| MsG0580024466.01.T01 | MTR_5g032750 | 25.558 | 403 | 270 | 4 | 6 | 380 | 16 | 416 | 2.16e-24 | 105 |
| MsG0580024466.01.T01 | MTR_7g087410 | 27.005 | 374 | 240 | 5 | 23 | 367 | 31 | 400 | 3.15e-24 | 104 |
| MsG0580024466.01.T01 | MTR_5g090290 | 24.485 | 388 | 263 | 4 | 20 | 380 | 43 | 427 | 1.39e-22 | 100 |
| MsG0580024466.01.T01 | MTR_6g047610 | 25.500 | 400 | 258 | 11 | 11 | 380 | 20 | 409 | 6.74e-22 | 97.8 |
| MsG0580024466.01.T01 | MTR_6g047590 | 24.557 | 395 | 268 | 8 | 11 | 380 | 20 | 409 | 8.16e-22 | 97.8 |
| MsG0580024466.01.T01 | MTR_3g099700 | 25.123 | 406 | 261 | 5 | 8 | 380 | 31 | 426 | 2.12e-21 | 96.7 |
| MsG0580024466.01.T01 | MTR_5g087930 | 28.214 | 280 | 180 | 5 | 48 | 307 | 51 | 329 | 4.05e-20 | 92.4 |
| MsG0580024466.01.T01 | MTR_7g087430 | 27.010 | 311 | 202 | 3 | 82 | 367 | 1 | 311 | 2.07e-19 | 89.7 |
| MsG0580024466.01.T01 | MTR_7g087370 | 25.385 | 390 | 226 | 8 | 8 | 367 | 15 | 369 | 4.54e-18 | 86.3 |
| MsG0580024466.01.T01 | MTR_7g087410 | 26.299 | 308 | 202 | 3 | 85 | 367 | 4 | 311 | 1.06e-17 | 84.7 |
| MsG0580024466.01.T01 | MTR_3g099720 | 24.810 | 395 | 268 | 6 | 4 | 370 | 20 | 413 | 1.06e-17 | 85.5 |
| MsG0580024466.01.T01 | MTR_6g047640 | 25.686 | 401 | 264 | 9 | 6 | 380 | 18 | 410 | 3.86e-16 | 80.5 |
| MsG0580024466.01.T01 | MTR_6g047640 | 24.938 | 401 | 248 | 11 | 6 | 380 | 18 | 391 | 7.63e-16 | 79.7 |
| MsG0580024466.01.T01 | MTR_2g079030 | 30.435 | 138 | 84 | 2 | 236 | 367 | 319 | 450 | 3.77e-15 | 77.8 |
| MsG0580024466.01.T01 | MTR_2g078990 | 32.331 | 133 | 90 | 0 | 235 | 367 | 98 | 230 | 4.40e-14 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580024466.01.T01 | AT4G22790 | 49.160 | 476 | 164 | 4 | 2 | 399 | 5 | 480 | 5.90e-149 | 432 |
| MsG0580024466.01.T01 | AT4G29140 | 34.005 | 397 | 232 | 6 | 4 | 371 | 34 | 429 | 1.25e-72 | 237 |
| MsG0580024466.01.T01 | AT5G19700 | 36.387 | 382 | 217 | 2 | 16 | 371 | 28 | 409 | 2.92e-71 | 233 |
| MsG0580024466.01.T01 | AT1G58340 | 37.666 | 377 | 209 | 2 | 23 | 373 | 57 | 433 | 1.24e-70 | 232 |
| MsG0580024466.01.T01 | AT1G71870 | 34.250 | 400 | 220 | 3 | 15 | 371 | 15 | 414 | 4.98e-70 | 229 |
| MsG0580024466.01.T01 | AT5G52050 | 32.888 | 374 | 219 | 3 | 30 | 371 | 41 | 414 | 2.81e-67 | 222 |
| MsG0580024466.01.T01 | AT4G23030 | 36.480 | 392 | 219 | 4 | 10 | 371 | 15 | 406 | 4.27e-67 | 222 |
| MsG0580024466.01.T01 | AT5G49130 | 33.249 | 397 | 225 | 3 | 15 | 371 | 17 | 413 | 7.87e-61 | 205 |
| MsG0580024466.01.T01 | AT2G38510 | 30.079 | 379 | 236 | 2 | 21 | 371 | 3 | 380 | 1.49e-60 | 204 |
| MsG0580024466.01.T01 | AT1G66760 | 31.888 | 392 | 241 | 4 | 4 | 369 | 8 | 399 | 1.23e-53 | 185 |
| MsG0580024466.01.T01 | AT1G66760 | 31.646 | 395 | 244 | 4 | 1 | 369 | 5 | 399 | 1.47e-53 | 186 |
| MsG0580024466.01.T01 | AT2G04040 | 32.626 | 377 | 224 | 3 | 21 | 369 | 24 | 398 | 2.64e-52 | 182 |
| MsG0580024466.01.T01 | AT1G66760 | 30.928 | 388 | 238 | 4 | 4 | 363 | 8 | 393 | 6.08e-51 | 176 |
| MsG0580024466.01.T01 | AT1G64820 | 31.266 | 387 | 232 | 4 | 13 | 369 | 18 | 400 | 4.47e-48 | 171 |
| MsG0580024466.01.T01 | AT2G04070 | 30.867 | 392 | 241 | 3 | 4 | 367 | 7 | 396 | 1.78e-47 | 169 |
| MsG0580024466.01.T01 | AT2G04080 | 30.000 | 390 | 247 | 3 | 4 | 367 | 7 | 396 | 2.75e-47 | 169 |
| MsG0580024466.01.T01 | AT2G04080 | 30.000 | 390 | 247 | 3 | 4 | 367 | 7 | 396 | 3.65e-47 | 168 |
| MsG0580024466.01.T01 | AT1G15150 | 30.423 | 378 | 227 | 3 | 21 | 367 | 28 | 400 | 1.13e-46 | 167 |
| MsG0580024466.01.T01 | AT2G04100 | 29.973 | 377 | 234 | 3 | 21 | 369 | 27 | 401 | 1.66e-46 | 166 |
| MsG0580024466.01.T01 | AT2G04100 | 29.973 | 377 | 234 | 3 | 21 | 369 | 27 | 401 | 2.77e-46 | 166 |
| MsG0580024466.01.T01 | AT1G15160 | 31.054 | 351 | 206 | 3 | 48 | 367 | 55 | 400 | 4.22e-46 | 166 |
| MsG0580024466.01.T01 | AT1G71140 | 29.744 | 390 | 243 | 5 | 9 | 370 | 12 | 398 | 4.38e-46 | 166 |
| MsG0580024466.01.T01 | AT5G52450 | 30.971 | 381 | 227 | 4 | 18 | 367 | 20 | 395 | 1.26e-45 | 164 |
| MsG0580024466.01.T01 | AT1G15170 | 31.467 | 375 | 221 | 3 | 24 | 367 | 34 | 403 | 5.72e-45 | 162 |
| MsG0580024466.01.T01 | AT2G04050 | 30.576 | 399 | 244 | 5 | 1 | 368 | 1 | 397 | 1.78e-44 | 161 |
| MsG0580024466.01.T01 | AT1G66780 | 32.471 | 348 | 209 | 4 | 48 | 369 | 59 | 406 | 3.15e-44 | 160 |
| MsG0580024466.01.T01 | AT1G73700 | 28.718 | 390 | 249 | 3 | 4 | 367 | 7 | 393 | 1.04e-43 | 159 |
| MsG0580024466.01.T01 | AT2G04090 | 28.117 | 377 | 241 | 3 | 21 | 369 | 27 | 401 | 1.41e-42 | 156 |
| MsG0580024466.01.T01 | AT1G15180 | 30.871 | 379 | 226 | 2 | 20 | 367 | 31 | 404 | 1.88e-42 | 155 |
| MsG0580024466.01.T01 | AT2G34360 | 27.467 | 375 | 238 | 3 | 20 | 367 | 23 | 390 | 1.03e-39 | 148 |
| MsG0580024466.01.T01 | AT1G61890 | 27.649 | 387 | 244 | 5 | 24 | 380 | 47 | 427 | 8.11e-38 | 143 |
| MsG0580024466.01.T01 | AT1G61890 | 27.649 | 387 | 244 | 5 | 24 | 380 | 47 | 427 | 9.21e-38 | 143 |
| MsG0580024466.01.T01 | AT1G61890 | 27.649 | 387 | 244 | 5 | 24 | 380 | 47 | 427 | 3.61e-37 | 141 |
| MsG0580024466.01.T01 | AT2G34360 | 28.205 | 351 | 224 | 6 | 20 | 367 | 23 | 348 | 7.10e-37 | 140 |
| MsG0580024466.01.T01 | AT1G11670 | 25.831 | 391 | 246 | 5 | 24 | 380 | 50 | 430 | 4.94e-36 | 138 |
| MsG0580024466.01.T01 | AT3G23550 | 27.394 | 376 | 237 | 4 | 23 | 367 | 30 | 400 | 1.13e-34 | 134 |
| MsG0580024466.01.T01 | AT3G23560 | 27.114 | 343 | 224 | 2 | 18 | 334 | 33 | 375 | 7.90e-33 | 128 |
| MsG0580024466.01.T01 | AT1G15170 | 29.720 | 286 | 165 | 3 | 113 | 367 | 4 | 284 | 8.63e-33 | 127 |
| MsG0580024466.01.T01 | AT3G23560 | 27.114 | 343 | 224 | 2 | 18 | 334 | 33 | 375 | 2.45e-32 | 128 |
| MsG0580024466.01.T01 | AT4G21910 | 26.494 | 385 | 250 | 5 | 24 | 380 | 55 | 434 | 2.90e-31 | 125 |
| MsG0580024466.01.T01 | AT4G21910 | 26.494 | 385 | 250 | 5 | 24 | 380 | 55 | 434 | 2.90e-31 | 125 |
| MsG0580024466.01.T01 | AT1G15150 | 29.021 | 286 | 167 | 3 | 113 | 367 | 4 | 284 | 1.00e-30 | 121 |
| MsG0580024466.01.T01 | AT1G47530 | 26.119 | 402 | 270 | 4 | 4 | 380 | 15 | 414 | 1.05e-30 | 123 |
| MsG0580024466.01.T01 | AT5G10420 | 28.342 | 374 | 237 | 4 | 34 | 380 | 48 | 417 | 1.38e-30 | 123 |
| MsG0580024466.01.T01 | AT3G26590 | 26.546 | 388 | 250 | 5 | 13 | 367 | 28 | 413 | 4.84e-30 | 121 |
| MsG0580024466.01.T01 | AT4G21910 | 26.684 | 386 | 248 | 6 | 24 | 380 | 57 | 436 | 6.68e-30 | 121 |
| MsG0580024466.01.T01 | AT4G21910 | 26.684 | 386 | 248 | 6 | 24 | 380 | 57 | 436 | 6.68e-30 | 121 |
| MsG0580024466.01.T01 | AT3G21690 | 26.494 | 385 | 251 | 3 | 24 | 380 | 52 | 432 | 1.56e-29 | 120 |
| MsG0580024466.01.T01 | AT4G00350 | 23.773 | 387 | 267 | 3 | 5 | 367 | 73 | 455 | 4.94e-29 | 119 |
| MsG0580024466.01.T01 | AT1G15180 | 28.996 | 269 | 155 | 2 | 113 | 350 | 4 | 267 | 7.03e-28 | 114 |
| MsG0580024466.01.T01 | AT4G21903 | 24.930 | 357 | 235 | 4 | 52 | 380 | 81 | 432 | 6.57e-27 | 112 |
| MsG0580024466.01.T01 | AT4G21903 | 24.930 | 357 | 235 | 4 | 52 | 380 | 81 | 432 | 1.17e-26 | 112 |
| MsG0580024466.01.T01 | AT4G25640 | 24.165 | 389 | 261 | 4 | 1 | 355 | 1 | 389 | 1.76e-26 | 111 |
| MsG0580024466.01.T01 | AT4G25640 | 24.422 | 389 | 260 | 4 | 1 | 355 | 1 | 389 | 1.93e-26 | 111 |
| MsG0580024466.01.T01 | AT1G12950 | 26.835 | 395 | 242 | 9 | 23 | 380 | 62 | 446 | 2.59e-26 | 111 |
| MsG0580024466.01.T01 | AT4G25640 | 24.165 | 389 | 261 | 4 | 1 | 355 | 1 | 389 | 3.41e-26 | 110 |
| MsG0580024466.01.T01 | AT5G38030 | 24.700 | 417 | 264 | 8 | 4 | 380 | 18 | 424 | 1.26e-25 | 108 |
| MsG0580024466.01.T01 | AT3G26590 | 27.742 | 310 | 195 | 3 | 85 | 367 | 4 | 311 | 5.38e-25 | 106 |
| MsG0580024466.01.T01 | AT5G44050 | 27.763 | 371 | 235 | 6 | 26 | 369 | 46 | 410 | 7.10e-25 | 106 |
| MsG0580024466.01.T01 | AT5G65380 | 25.310 | 403 | 264 | 6 | 8 | 380 | 21 | 416 | 9.21e-25 | 106 |
| MsG0580024466.01.T01 | AT4G21903 | 25.000 | 324 | 211 | 3 | 85 | 380 | 4 | 323 | 5.61e-24 | 103 |
| MsG0580024466.01.T01 | AT1G33110 | 29.396 | 364 | 228 | 6 | 31 | 367 | 43 | 404 | 8.32e-24 | 103 |
| MsG0580024466.01.T01 | AT1G33090 | 27.249 | 389 | 252 | 5 | 21 | 380 | 29 | 415 | 9.14e-24 | 103 |
| MsG0580024466.01.T01 | AT1G33110 | 29.775 | 356 | 213 | 8 | 31 | 355 | 43 | 392 | 2.05e-23 | 101 |
| MsG0580024466.01.T01 | AT1G33100 | 27.586 | 377 | 242 | 7 | 31 | 380 | 40 | 412 | 7.91e-23 | 100 |
| MsG0580024466.01.T01 | AT1G66760 | 28.782 | 271 | 167 | 4 | 125 | 369 | 1 | 271 | 1.50e-21 | 95.5 |
| MsG0580024466.01.T01 | AT3G59030 | 23.288 | 365 | 244 | 6 | 48 | 382 | 75 | 433 | 2.37e-20 | 93.6 |
| MsG0580024466.01.T01 | AT1G47530 | 25.545 | 321 | 212 | 4 | 85 | 380 | 4 | 322 | 2.48e-20 | 92.4 |
| MsG0580024466.01.T01 | AT1G33080 | 27.198 | 364 | 236 | 6 | 31 | 367 | 43 | 404 | 2.97e-20 | 93.2 |
| MsG0580024466.01.T01 | AT3G59030 | 23.669 | 338 | 224 | 5 | 48 | 355 | 75 | 408 | 5.70e-20 | 91.7 |
| MsG0580024466.01.T01 | AT5G17700 | 25.538 | 372 | 248 | 8 | 23 | 367 | 33 | 402 | 6.27e-20 | 92.0 |
| MsG0580024466.01.T01 | AT5G17700 | 25.538 | 372 | 248 | 8 | 23 | 367 | 33 | 402 | 6.27e-20 | 92.0 |
| MsG0580024466.01.T01 | AT1G33080 | 27.198 | 364 | 236 | 6 | 31 | 367 | 43 | 404 | 1.26e-19 | 91.3 |
| MsG0580024466.01.T01 | AT5G17700 | 25.833 | 360 | 238 | 8 | 23 | 355 | 33 | 390 | 1.60e-19 | 90.5 |
| MsG0580024466.01.T01 | AT3G03620 | 25.323 | 387 | 260 | 8 | 8 | 367 | 21 | 405 | 9.12e-19 | 88.6 |
| MsG0580024466.01.T01 | AT3G03620 | 25.323 | 387 | 260 | 8 | 8 | 367 | 21 | 405 | 9.12e-19 | 88.6 |
| MsG0580024466.01.T01 | AT1G23300 | 24.595 | 370 | 238 | 6 | 31 | 367 | 51 | 412 | 7.74e-18 | 85.9 |
Find 103 sgRNAs with CRISPR-Local
Find 144 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGGCTGCAAGGGGAATTT+GGG | 0.166621 | 5:+5301809 | MsG0580024466.01.T01:CDS |
| TTCACTTTCGCTAACGTTAC+TGG | 0.209280 | 5:+5300972 | MsG0580024466.01.T01:CDS |
| TGGTGGCTGCAAGGGGAATT+TGG | 0.224291 | 5:+5301808 | MsG0580024466.01.T01:CDS |
| AGCTTAGCCGGTGGCGCGCT+CGG | 0.247230 | 5:+5300948 | MsG0580024466.01.T01:CDS |
| GAAATTCTAGTCTTGCTTAC+TGG | 0.273403 | 5:+5301573 | MsG0580024466.01.T01:CDS |
| CTTCCTACCATGTTTAGTTC+TGG | 0.293099 | 5:+5301293 | MsG0580024466.01.T01:CDS |
| TGAAGCCACATGAAAGTAAT+AGG | 0.326554 | 5:-5301125 | None:intergenic |
| CATGATAGGGGCACTATAAA+TGG | 0.328539 | 5:+5301846 | MsG0580024466.01.T01:CDS |
| CAAGAAATTTCCACTGTTGC+TGG | 0.340485 | 5:+5301182 | MsG0580024466.01.T01:CDS |
| TTTGAGAGTAGTATGTTAAC+AGG | 0.351355 | 5:-5301338 | None:intergenic |
| CCATGAGCCTGTCCACAAAT+AGG | 0.351874 | 5:-5301032 | None:intergenic |
| CACAGGGAACTTCTTTAACT+TGG | 0.357675 | 5:-5302174 | None:intergenic |
| GACAATTGTATTGTTGCTAT+TGG | 0.359414 | 5:+5301094 | MsG0580024466.01.T01:CDS |
| GCTTAGCCGGTGGCGCGCTC+GGG | 0.363500 | 5:+5300949 | MsG0580024466.01.T01:CDS |
| AGAGTATTATGGATTGGATT+AGG | 0.376619 | 5:+5301493 | MsG0580024466.01.T01:CDS |
| TGCTGTTGTGATTGCTGTCT+TGG | 0.380543 | 5:-5300901 | None:intergenic |
| CAGTGGAAATTTCTTGTTGT+TGG | 0.381992 | 5:-5301175 | None:intergenic |
| TTTCTCAGTGATGCTGTCAT+TGG | 0.384106 | 5:+5301662 | MsG0580024466.01.T01:CDS |
| GCTAAATTCATCAACATCAT+TGG | 0.390023 | 5:-5300870 | None:intergenic |
| ATTAGGCTAATCAAGCTATC+TGG | 0.398009 | 5:+5301510 | MsG0580024466.01.T01:CDS |
| GGCAACTCTTCAGCCATGAT+AGG | 0.398212 | 5:+5301832 | MsG0580024466.01.T01:CDS |
| GTGGCTGCAAGGGGAATTTG+GGG | 0.399284 | 5:+5301810 | MsG0580024466.01.T01:CDS |
| TCAGAGGAGCTAAGAGTTCA+AGG | 0.400477 | 5:+5300834 | MsG0580024466.01.T01:CDS |
| ACTGGCTTCTCTGTCTTGAA+TGG | 0.406137 | 5:+5300990 | MsG0580024466.01.T01:CDS |
| CGCAGGTTGCACCGGCAGCT+TGG | 0.414906 | 5:+5301782 | MsG0580024466.01.T01:CDS |
| GCTTGGTGATGGTGGCTGCA+AGG | 0.424849 | 5:+5301799 | MsG0580024466.01.T01:CDS |
| CGCAAACGCCAAGCAAGCAT+TGG | 0.427319 | 5:+5301602 | MsG0580024466.01.T01:CDS |
| CGCCAAGCTCGTTTGAGACA+CGG | 0.430905 | 5:-5301701 | None:intergenic |
| TGGGTTTGTAATGGTGGAGG+AGG | 0.431977 | 5:-5300777 | None:intergenic |
| CTTGGTGATGGTGGCTGCAA+GGG | 0.432045 | 5:+5301800 | MsG0580024466.01.T01:CDS |
| TATTATTAGTATTCATTGCT+AGG | 0.432752 | 5:+5302101 | MsG0580024466.01.T01:intron |
| AGGGACAGCTCGACCTTGGT+TGG | 0.445218 | 5:+5301947 | MsG0580024466.01.T01:CDS |
| TGGTACTTCTGCGTCATCAC+AGG | 0.449230 | 5:-5302191 | None:intergenic |
| CATTTATAGTGCCCCTATCA+TGG | 0.457544 | 5:-5301845 | None:intergenic |
| ACCGGTACGCTCGGTCGGCT+TGG | 0.459703 | 5:-5301728 | None:intergenic |
| TAAAACTCCCAATGCTTGCT+TGG | 0.462126 | 5:-5301610 | None:intergenic |
| TCTAGAGAATCGAAAGGTAT+TGG | 0.462933 | 5:+5301443 | MsG0580024466.01.T01:intron |
| ACTTGCTAATATTTGTGCCT+TGG | 0.463290 | 5:-5302146 | None:intergenic |
| CGGTCAGCGCGTGTGTCTCT+AGG | 0.465994 | 5:+5301747 | MsG0580024466.01.T01:CDS |
| TCTGAAAGCAGCGTCTTCGC+TGG | 0.467091 | 5:-5300816 | None:intergenic |
| CGTGGAAAGAAGGAGGATGG+TGG | 0.478669 | 5:+5301466 | MsG0580024466.01.T01:CDS |
| ATGGTGGGATCAGAGTATTA+TGG | 0.479182 | 5:+5301482 | MsG0580024466.01.T01:CDS |
| CTAGGTGAGCTCAGCTTAGC+CGG | 0.481845 | 5:+5300936 | MsG0580024466.01.T01:CDS |
| GCAACTCTTCAGCCATGATA+GGG | 0.483823 | 5:+5301833 | MsG0580024466.01.T01:CDS |
| AGTGACATAACAAACAAATC+AGG | 0.486224 | 5:-5301227 | None:intergenic |
| GAATGGTCTCTGTGGTGCCA+TGG | 0.486890 | 5:+5301007 | MsG0580024466.01.T01:CDS |
| TTGTTGTCTCAACACATGTA+TGG | 0.488430 | 5:+5301536 | MsG0580024466.01.T01:CDS |
| GGGACAGCTCGACCTTGGTT+GGG | 0.495004 | 5:+5301948 | MsG0580024466.01.T01:CDS |
| GGGATCAGAGTATTATGGAT+TGG | 0.495416 | 5:+5301487 | MsG0580024466.01.T01:CDS |
| ACCCGTGTCTCAAACGAGCT+TGG | 0.500843 | 5:+5301699 | MsG0580024466.01.T01:CDS |
| CCTATTTGTGGACAGGCTCA+TGG | 0.501376 | 5:+5301032 | MsG0580024466.01.T01:CDS |
| TATTCATTGCTAGGATAAAG+TGG | 0.503924 | 5:+5302110 | MsG0580024466.01.T01:CDS |
| GCCAAGCTCGTTTGAGACAC+GGG | 0.510977 | 5:-5301700 | None:intergenic |
| AGTGAACCCGAGCGCGCCAC+CGG | 0.515331 | 5:-5300955 | None:intergenic |
| AAGGTATTGGCGTGGAAAGA+AGG | 0.518806 | 5:+5301456 | MsG0580024466.01.T01:CDS |
| GCAAACGCCAAGCAAGCATT+GGG | 0.519010 | 5:+5301603 | MsG0580024466.01.T01:CDS |
| AGCCACCATCACCAAGCTGC+CGG | 0.520002 | 5:-5301793 | None:intergenic |
| CACGCGCTGACCGGTACGCT+CGG | 0.520838 | 5:-5301737 | None:intergenic |
| CATGGAACCTATTTGTGGAC+AGG | 0.523239 | 5:+5301025 | MsG0580024466.01.T01:CDS |
| TTGCACCGGCAGCTTGGTGA+TGG | 0.528564 | 5:+5301788 | MsG0580024466.01.T01:CDS |
| TTCGAGGGACAGCTCGACCT+TGG | 0.533695 | 5:+5301943 | MsG0580024466.01.T01:CDS |
| CACCGGCAGCTTGGTGATGG+TGG | 0.540745 | 5:+5301791 | MsG0580024466.01.T01:CDS |
| CTAGAGACACACGCGCTGAC+CGG | 0.547309 | 5:-5301746 | None:intergenic |
| AGCGAAGACGCTGCTTTCAG+AGG | 0.548362 | 5:+5300818 | MsG0580024466.01.T01:CDS |
| TGATGTTGATGAATTTAGCT+TGG | 0.549712 | 5:+5300874 | MsG0580024466.01.T01:CDS |
| GTTTGTGGAGGCATAGTTCG+AGG | 0.549958 | 5:+5301927 | MsG0580024466.01.T01:CDS |
| ATGCCTCCACAAACTGCCAA+TGG | 0.550253 | 5:-5301918 | None:intergenic |
| TGGCGTGGAAAGAAGGAGGA+TGG | 0.552982 | 5:+5301463 | MsG0580024466.01.T01:CDS |
| AATGGTGGAGGAGGTGACAT+TGG | 0.553401 | 5:-5300768 | None:intergenic |
| AATGTTGTTGATGGCTCTAG+TGG | 0.559949 | 5:+5301881 | MsG0580024466.01.T01:CDS |
| CGCTGACCGGTACGCTCGGT+CGG | 0.568556 | 5:-5301733 | None:intergenic |
| CTTGCTTGGCGTTTGCGAGG+TGG | 0.568986 | 5:-5301596 | None:intergenic |
| GGTGCCATGGAACCTATTTG+TGG | 0.570180 | 5:+5301020 | MsG0580024466.01.T01:CDS |
| GTGGAAAGAAGGAGGATGGT+GGG | 0.570875 | 5:+5301467 | MsG0580024466.01.T01:CDS |
| CTGTCCACAAATAGGTTCCA+TGG | 0.574641 | 5:-5301024 | None:intergenic |
| CAATTCCTATTACTTTCATG+TGG | 0.579908 | 5:+5301120 | MsG0580024466.01.T01:CDS |
| ACCAAGCCGACCGAGCGTAC+CGG | 0.581822 | 5:+5301727 | MsG0580024466.01.T01:CDS |
| TTTCCATTGGCAGTTTGTGG+AGG | 0.586502 | 5:+5301915 | MsG0580024466.01.T01:CDS |
| TGGCTGCAAGGGGAATTTGG+GGG | 0.591531 | 5:+5301811 | MsG0580024466.01.T01:CDS |
| AACATAAGTACCAGCAACAG+TGG | 0.598946 | 5:-5301192 | None:intergenic |
| GTGGGTGGAAGAAGCTGCCA+AGG | 0.602858 | 5:+5302129 | MsG0580024466.01.T01:CDS |
| TTGGTGATGGTGGCTGCAAG+GGG | 0.610161 | 5:+5301801 | MsG0580024466.01.T01:CDS |
| ATGCTTGCTTGGCGTTTGCG+AGG | 0.612886 | 5:-5301599 | None:intergenic |
| ACACCAGAACTAAACATGGT+AGG | 0.622764 | 5:-5301296 | None:intergenic |
| TTTAATTCTAGAGAATCGAA+AGG | 0.625448 | 5:+5301437 | MsG0580024466.01.T01:intron |
| GGTACTTCTGCGTCATCACA+GGG | 0.629425 | 5:-5302190 | None:intergenic |
| GTATTGGCGTGGAAAGAAGG+AGG | 0.632332 | 5:+5301459 | MsG0580024466.01.T01:CDS |
| ATTCATTGCTAGGATAAAGT+GGG | 0.633439 | 5:+5302111 | MsG0580024466.01.T01:CDS |
| CAACTCTTCAGCCATGATAG+GGG | 0.633765 | 5:+5301834 | MsG0580024466.01.T01:CDS |
| GGTGAGCTCAGCTTAGCCGG+TGG | 0.638224 | 5:+5300939 | MsG0580024466.01.T01:CDS |
| TTTGTGGAGGCATAGTTCGA+GGG | 0.638241 | 5:+5301928 | MsG0580024466.01.T01:CDS |
| GACACGGGTGGAAACACAAG+TGG | 0.646609 | 5:-5301685 | None:intergenic |
| TGCTACACCAGAACTAAACA+TGG | 0.651792 | 5:-5301300 | None:intergenic |
| CATTGCTAGGATAAAGTGGG+TGG | 0.653404 | 5:+5302114 | MsG0580024466.01.T01:CDS |
| TCTGTCTTGAATGGTCTCTG+TGG | 0.655881 | 5:+5300999 | MsG0580024466.01.T01:CDS |
| AGAATCGAAAGGTATTGGCG+TGG | 0.660271 | 5:+5301448 | MsG0580024466.01.T01:CDS |
| TCAACACATGTATGGAGTGG+TGG | 0.666907 | 5:+5301544 | MsG0580024466.01.T01:CDS |
| TCATGAGAAGTGTCTTGTGA+AGG | 0.670945 | 5:-5301073 | None:intergenic |
| ATAGTCAAAGTTCAACACAA+TGG | 0.680940 | 5:-5301634 | None:intergenic |
| GTCTCAACACATGTATGGAG+TGG | 0.690627 | 5:+5301541 | MsG0580024466.01.T01:CDS |
| AAGCTCGTTTGAGACACGGG+TGG | 0.702539 | 5:-5301697 | None:intergenic |
| TGACGCAGAAGTACCAACTG+AGG | 0.735542 | 5:+5302198 | MsG0580024466.01.T01:CDS |
| TTTGCATACATACCCAACCA+AGG | 0.735927 | 5:-5301960 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTATTAGTATTCATTGCT+AGG | + | Chr5:5302101-5302120 | MsG0580024466.01.T01:intron | 20.0% |
| !!! | CTCTAGAATTAAAACATAAA+TGG | - | Chr5:5301430-5301449 | None:intergenic | 20.0% |
| !!! | GACAAAATTTTGATTCATTT+TGG | + | Chr5:5301152-5301171 | MsG0580024466.01.T01:CDS | 20.0% |
| ! | AAAAAAGACAATGTTGTTGA+TGG | + | Chr5:5301872-5301891 | MsG0580024466.01.T01:CDS | 25.0% |
| !! | TTTAATTCTAGAGAATCGAA+AGG | + | Chr5:5301437-5301456 | MsG0580024466.01.T01:intron | 25.0% |
| AGTGACATAACAAACAAATC+AGG | - | Chr5:5301230-5301249 | None:intergenic | 30.0% | |
| ATACTACTCTCAAAAACCAT+GGG | + | Chr5:5301347-5301366 | MsG0580024466.01.T01:CDS | 30.0% | |
| ATAGTCAAAGTTCAACACAA+TGG | - | Chr5:5301637-5301656 | None:intergenic | 30.0% | |
| ATTCATTGCTAGGATAAAGT+GGG | + | Chr5:5302111-5302130 | MsG0580024466.01.T01:CDS | 30.0% | |
| CAATTCCTATTACTTTCATG+TGG | + | Chr5:5301120-5301139 | MsG0580024466.01.T01:CDS | 30.0% | |
| GACAATTGTATTGTTGCTAT+TGG | + | Chr5:5301094-5301113 | MsG0580024466.01.T01:CDS | 30.0% | |
| GCTAAATTCATCAACATCAT+TGG | - | Chr5:5300873-5300892 | None:intergenic | 30.0% | |
| TATTCATTGCTAGGATAAAG+TGG | + | Chr5:5302110-5302129 | MsG0580024466.01.T01:CDS | 30.0% | |
| TTTGAGAGTAGTATGTTAAC+AGG | - | Chr5:5301341-5301360 | None:intergenic | 30.0% | |
| ! | GATTATTGTTGTTGTTCTTC+TGG | + | Chr5:5301404-5301423 | MsG0580024466.01.T01:intron | 30.0% |
| ! | TGATGTTGATGAATTTAGCT+TGG | + | Chr5:5300874-5300893 | MsG0580024466.01.T01:CDS | 30.0% |
| !! | AGAGTATTATGGATTGGATT+AGG | + | Chr5:5301493-5301512 | MsG0580024466.01.T01:CDS | 30.0% |
| !! | GGAGTTGTTTAATTTTCCAT+TGG | + | Chr5:5301902-5301921 | MsG0580024466.01.T01:CDS | 30.0% |
| !!! | TCACATTTTTGGGTTTGTAA+TGG | - | Chr5:5300789-5300808 | None:intergenic | 30.0% |
| ATTAGGCTAATCAAGCTATC+TGG | + | Chr5:5301510-5301529 | MsG0580024466.01.T01:CDS | 35.0% | |
| CATACTACTCTCAAAAACCA+TGG | + | Chr5:5301346-5301365 | MsG0580024466.01.T01:CDS | 35.0% | |
| TGAAGCCACATGAAAGTAAT+AGG | - | Chr5:5301128-5301147 | None:intergenic | 35.0% | |
| TTGGGTATGTATGCAAATCT+AGG | + | Chr5:5301966-5301985 | MsG0580024466.01.T01:intron | 35.0% | |
| TTGTTGTCTCAACACATGTA+TGG | + | Chr5:5301536-5301555 | MsG0580024466.01.T01:CDS | 35.0% | |
| ! | AATTTTCCATTGGCAGTTTG+TGG | + | Chr5:5301912-5301931 | MsG0580024466.01.T01:CDS | 35.0% |
| ! | ACTTGCTAATATTTGTGCCT+TGG | - | Chr5:5302149-5302168 | None:intergenic | 35.0% |
| ! | AGAGCTCAAGTAAGCTTTTA+AGG | - | Chr5:5301261-5301280 | None:intergenic | 35.0% |
| ! | AGCAATCACAACAGCATTTT+TGG | + | Chr5:5300908-5300927 | MsG0580024466.01.T01:CDS | 35.0% |
| ! | CAGTGGAAATTTCTTGTTGT+TGG | - | Chr5:5301178-5301197 | None:intergenic | 35.0% |
| ! | GAGCTCAAGTAAGCTTTTAA+GGG | - | Chr5:5301260-5301279 | None:intergenic | 35.0% |
| ! | GCAATCACAACAGCATTTTT+GGG | + | Chr5:5300909-5300928 | MsG0580024466.01.T01:CDS | 35.0% |
| ! | TCTAGAGAATCGAAAGGTAT+TGG | + | Chr5:5301443-5301462 | MsG0580024466.01.T01:intron | 35.0% |
| ! | TGGATTTGCGTCACATTTTT+GGG | - | Chr5:5300799-5300818 | None:intergenic | 35.0% |
| !! | GAAATTCTAGTCTTGCTTAC+TGG | + | Chr5:5301573-5301592 | MsG0580024466.01.T01:CDS | 35.0% |
| !!! | CATTTTTGGGTTTGTAATGG+TGG | - | Chr5:5300786-5300805 | None:intergenic | 35.0% |
| AAAAACCATGGGTCTAAGAG+GGG | + | Chr5:5301358-5301377 | MsG0580024466.01.T01:intron | 40.0% | |
| AACATAAGTACCAGCAACAG+TGG | - | Chr5:5301195-5301214 | None:intergenic | 40.0% | |
| AAGGCAAAAACAACACCAAG+GGG | - | Chr5:5302013-5302032 | None:intergenic | 40.0% | |
| ACACCAGAACTAAACATGGT+AGG | - | Chr5:5301299-5301318 | None:intergenic | 40.0% | |
| ATCAGTTATCCAAACAGCCA+TGG | - | Chr5:5301387-5301406 | None:intergenic | 40.0% | |
| CAAAAACCATGGGTCTAAGA+GGG | + | Chr5:5301357-5301376 | MsG0580024466.01.T01:intron | 40.0% | |
| CAAGAAATTTCCACTGTTGC+TGG | + | Chr5:5301182-5301201 | MsG0580024466.01.T01:CDS | 40.0% | |
| CACAGGGAACTTCTTTAACT+TGG | - | Chr5:5302177-5302196 | None:intergenic | 40.0% | |
| CATTTATAGTGCCCCTATCA+TGG | - | Chr5:5301848-5301867 | None:intergenic | 40.0% | |
| CTCTTCTTTGGACTTCTTAC+TGG | + | Chr5:5302058-5302077 | MsG0580024466.01.T01:intron | 40.0% | |
| GAAGGCAAAAACAACACCAA+GGG | - | Chr5:5302014-5302033 | None:intergenic | 40.0% | |
| GGTATGTATGCAAATCTAGG+CGG | + | Chr5:5301969-5301988 | MsG0580024466.01.T01:intron | 40.0% | |
| GTATGTATGCAAATCTAGGC+GGG | + | Chr5:5301970-5301989 | MsG0580024466.01.T01:intron | 40.0% | |
| TAAAACTCCCAATGCTTGCT+TGG | - | Chr5:5301613-5301632 | None:intergenic | 40.0% | |
| TCAAAAACCATGGGTCTAAG+AGG | + | Chr5:5301356-5301375 | MsG0580024466.01.T01:intron | 40.0% | |
| TGAAGGCAAAAACAACACCA+AGG | - | Chr5:5302015-5302034 | None:intergenic | 40.0% | |
| TGCTACACCAGAACTAAACA+TGG | - | Chr5:5301303-5301322 | None:intergenic | 40.0% | |
| TTCACTTTCGCTAACGTTAC+TGG | + | Chr5:5300972-5300991 | MsG0580024466.01.T01:CDS | 40.0% | |
| TTTCTCAGTGATGCTGTCAT+TGG | + | Chr5:5301662-5301681 | MsG0580024466.01.T01:CDS | 40.0% | |
| TTTGCATACATACCCAACCA+AGG | - | Chr5:5301963-5301982 | None:intergenic | 40.0% | |
| ! | ATGGTGGGATCAGAGTATTA+TGG | + | Chr5:5301482-5301501 | MsG0580024466.01.T01:CDS | 40.0% |
| ! | CTAGGAATAGCTTTTATCGC+AGG | + | Chr5:5301765-5301784 | MsG0580024466.01.T01:CDS | 40.0% |
| ! | CTGGATTTGCGTCACATTTT+TGG | - | Chr5:5300800-5300819 | None:intergenic | 40.0% |
| ! | CTTCCTACCATGTTTAGTTC+TGG | + | Chr5:5301293-5301312 | MsG0580024466.01.T01:CDS | 40.0% |
| ! | GGGATCAGAGTATTATGGAT+TGG | + | Chr5:5301487-5301506 | MsG0580024466.01.T01:CDS | 40.0% |
| !! | AATGTTGTTGATGGCTCTAG+TGG | + | Chr5:5301881-5301900 | MsG0580024466.01.T01:CDS | 40.0% |
| !! | CATGATAGGGGCACTATAAA+TGG | + | Chr5:5301846-5301865 | MsG0580024466.01.T01:CDS | 40.0% |
| !! | TCATGAGAAGTGTCTTGTGA+AGG | - | Chr5:5301076-5301095 | None:intergenic | 40.0% |
| !!! | ATCTAGGCGGGTTTTATTTC+TGG | + | Chr5:5301982-5302001 | MsG0580024466.01.T01:intron | 40.0% |
| !!! | TTTTGGGTTTGTAATGGTGG+AGG | - | Chr5:5300783-5300802 | None:intergenic | 40.0% |
| CAACTCTTCAGCCATGATAG+GGG | + | Chr5:5301834-5301853 | MsG0580024466.01.T01:CDS | 45.0% | |
| CATGGAACCTATTTGTGGAC+AGG | + | Chr5:5301025-5301044 | MsG0580024466.01.T01:CDS | 45.0% | |
| CATTGCTAGGATAAAGTGGG+TGG | + | Chr5:5302114-5302133 | MsG0580024466.01.T01:CDS | 45.0% | |
| CTGTCCACAAATAGGTTCCA+TGG | - | Chr5:5301027-5301046 | None:intergenic | 45.0% | |
| GCAACTCTTCAGCCATGATA+GGG | + | Chr5:5301833-5301852 | MsG0580024466.01.T01:CDS | 45.0% | |
| GTCCAAAGAAGAGTCCAACA+AGG | - | Chr5:5302051-5302070 | None:intergenic | 45.0% | |
| GTCTCAACACATGTATGGAG+TGG | + | Chr5:5301541-5301560 | MsG0580024466.01.T01:CDS | 45.0% | |
| TCAACACATGTATGGAGTGG+TGG | + | Chr5:5301544-5301563 | MsG0580024466.01.T01:CDS | 45.0% | |
| TCAGAGGAGCTAAGAGTTCA+AGG | + | Chr5:5300834-5300853 | MsG0580024466.01.T01:CDS | 45.0% | |
| TCTGTCTTGAATGGTCTCTG+TGG | + | Chr5:5300999-5301018 | MsG0580024466.01.T01:CDS | 45.0% | |
| TGCTGTTGTGATTGCTGTCT+TGG | - | Chr5:5300904-5300923 | None:intergenic | 45.0% | |
| TTTCCATTGGCAGTTTGTGG+AGG | + | Chr5:5301915-5301934 | MsG0580024466.01.T01:CDS | 45.0% | |
| TTTGCCTTCAAGCTTCGTCT+TGG | + | Chr5:5302025-5302044 | MsG0580024466.01.T01:intron | 45.0% | |
| ! | ACTGGCTTCTCTGTCTTGAA+TGG | + | Chr5:5300990-5301009 | MsG0580024466.01.T01:CDS | 45.0% |
| ! | TCATTTTCACGAGCCTCAGT+TGG | - | Chr5:5302214-5302233 | None:intergenic | 45.0% |
| ! | TTTGTGGAGGCATAGTTCGA+GGG | + | Chr5:5301928-5301947 | MsG0580024466.01.T01:CDS | 45.0% |
| !! | AAGGTATTGGCGTGGAAAGA+AGG | + | Chr5:5301456-5301475 | MsG0580024466.01.T01:CDS | 45.0% |
| !! | AGAATCGAAAGGTATTGGCG+TGG | + | Chr5:5301448-5301467 | MsG0580024466.01.T01:CDS | 45.0% |
| !!! | ACAGCATTTTTGGGTCGACT+AGG | + | Chr5:5300918-5300937 | MsG0580024466.01.T01:CDS | 45.0% |
| AAGGCCAAGACGAAGCTTGA+AGG | - | Chr5:5302032-5302051 | None:intergenic | 50.0% | |
| ATGCCTCCACAAACTGCCAA+TGG | - | Chr5:5301921-5301940 | None:intergenic | 50.0% | |
| CCATGAGCCTGTCCACAAAT+AGG | - | Chr5:5301035-5301054 | None:intergenic | 50.0% | |
| CCTATTTGTGGACAGGCTCA+TGG | + | Chr5:5301032-5301051 | MsG0580024466.01.T01:CDS | 50.0% | |
| GCAAACGCCAAGCAAGCATT+GGG | + | Chr5:5301603-5301622 | MsG0580024466.01.T01:CDS | 50.0% | |
| GGCAACTCTTCAGCCATGAT+AGG | + | Chr5:5301832-5301851 | MsG0580024466.01.T01:CDS | 50.0% | |
| GGTACTTCTGCGTCATCACA+GGG | - | Chr5:5302193-5302212 | None:intergenic | 50.0% | |
| GTGGAAAGAAGGAGGATGGT+GGG | + | Chr5:5301467-5301486 | MsG0580024466.01.T01:CDS | 50.0% | |
| TGGTACTTCTGCGTCATCAC+AGG | - | Chr5:5302194-5302213 | None:intergenic | 50.0% | |
| ! | GCTTTTATCGCAGGTTGCAC+CGG | + | Chr5:5301774-5301793 | MsG0580024466.01.T01:CDS | 50.0% |
| ! | GGTGCCATGGAACCTATTTG+TGG | + | Chr5:5301020-5301039 | MsG0580024466.01.T01:CDS | 50.0% |
| ! | GTATTGGCGTGGAAAGAAGG+AGG | + | Chr5:5301459-5301478 | MsG0580024466.01.T01:CDS | 50.0% |
| ! | GTTTGTGGAGGCATAGTTCG+AGG | + | Chr5:5301927-5301946 | MsG0580024466.01.T01:CDS | 50.0% |
| ! | TGGGTTTGTAATGGTGGAGG+AGG | - | Chr5:5300780-5300799 | None:intergenic | 50.0% |
| !! | AAGCTTCGTCTTGGCCTTGT+TGG | + | Chr5:5302034-5302053 | MsG0580024466.01.T01:intron | 50.0% |
| !! | GGCCTTGTTGGACTCTTCTT+TGG | + | Chr5:5302046-5302065 | MsG0580024466.01.T01:intron | 50.0% |
| !! | TGACGCAGAAGTACCAACTG+AGG | + | Chr5:5302198-5302217 | MsG0580024466.01.T01:CDS | 50.0% |
| !! | TTATTTCTGGCTCTGCCCCT+TGG | + | Chr5:5301995-5302014 | MsG0580024466.01.T01:intron | 50.0% |
| ACCCGTGTCTCAAACGAGCT+TGG | + | Chr5:5301699-5301718 | MsG0580024466.01.T01:CDS | 55.0% | |
| ATGCTTGCTTGGCGTTTGCG+AGG | - | Chr5:5301602-5301621 | None:intergenic | 55.0% | |
| CGCAAACGCCAAGCAAGCAT+TGG | + | Chr5:5301602-5301621 | MsG0580024466.01.T01:CDS | 55.0% | |
| CGTGGAAAGAAGGAGGATGG+TGG | + | Chr5:5301466-5301485 | MsG0580024466.01.T01:CDS | 55.0% | |
| CTAGGTGAGCTCAGCTTAGC+CGG | + | Chr5:5300936-5300955 | MsG0580024466.01.T01:CDS | 55.0% | |
| GACACGGGTGGAAACACAAG+TGG | - | Chr5:5301688-5301707 | None:intergenic | 55.0% | |
| GAGGGGTTTCCATGGCTGTT+TGG | + | Chr5:5301375-5301394 | MsG0580024466.01.T01:intron | 55.0% | |
| GGAAACCCCTCTTAGACCCA+TGG | - | Chr5:5301366-5301385 | None:intergenic | 55.0% | |
| GGGTCTAAGAGGGGTTTCCA+TGG | + | Chr5:5301367-5301386 | MsG0580024466.01.T01:intron | 55.0% | |
| GGTGGCTGCAAGGGGAATTT+GGG | + | Chr5:5301809-5301828 | MsG0580024466.01.T01:CDS | 55.0% | |
| GTGGCTGCAAGGGGAATTTG+GGG | + | Chr5:5301810-5301829 | MsG0580024466.01.T01:CDS | 55.0% | |
| TCTGAAAGCAGCGTCTTCGC+TGG | - | Chr5:5300819-5300838 | None:intergenic | 55.0% | |
| TGGCGTGGAAAGAAGGAGGA+TGG | + | Chr5:5301463-5301482 | MsG0580024466.01.T01:CDS | 55.0% | |
| TGGCTGCAAGGGGAATTTGG+GGG | + | Chr5:5301811-5301830 | MsG0580024466.01.T01:CDS | 55.0% | |
| TGGTGGCTGCAAGGGGAATT+TGG | + | Chr5:5301808-5301827 | MsG0580024466.01.T01:CDS | 55.0% | |
| ! | AAGCTCGTTTGAGACACGGG+TGG | - | Chr5:5301700-5301719 | None:intergenic | 55.0% |
| ! | AGCGAAGACGCTGCTTTCAG+AGG | + | Chr5:5300818-5300837 | MsG0580024466.01.T01:CDS | 55.0% |
| ! | CGCCAAGCTCGTTTGAGACA+CGG | - | Chr5:5301704-5301723 | None:intergenic | 55.0% |
| ! | GAATGGTCTCTGTGGTGCCA+TGG | + | Chr5:5301007-5301026 | MsG0580024466.01.T01:CDS | 55.0% |
| ! | GCCAAGCTCGTTTGAGACAC+GGG | - | Chr5:5301703-5301722 | None:intergenic | 55.0% |
| !! | CTTGGTGATGGTGGCTGCAA+GGG | + | Chr5:5301800-5301819 | MsG0580024466.01.T01:CDS | 55.0% |
| !! | TTGGTGATGGTGGCTGCAAG+GGG | + | Chr5:5301801-5301820 | MsG0580024466.01.T01:CDS | 55.0% |
| AGCCACCATCACCAAGCTGC+CGG | - | Chr5:5301796-5301815 | None:intergenic | 60.0% | |
| AGGGACAGCTCGACCTTGGT+TGG | + | Chr5:5301947-5301966 | MsG0580024466.01.T01:CDS | 60.0% | |
| CTTGCTTGGCGTTTGCGAGG+TGG | - | Chr5:5301599-5301618 | None:intergenic | 60.0% | |
| GGGACAGCTCGACCTTGGTT+GGG | + | Chr5:5301948-5301967 | MsG0580024466.01.T01:CDS | 60.0% | |
| GTGGGTGGAAGAAGCTGCCA+AGG | + | Chr5:5302129-5302148 | MsG0580024466.01.T01:CDS | 60.0% | |
| TTCGAGGGACAGCTCGACCT+TGG | + | Chr5:5301943-5301962 | MsG0580024466.01.T01:CDS | 60.0% | |
| ! | CTAGAGACACACGCGCTGAC+CGG | - | Chr5:5301749-5301768 | None:intergenic | 60.0% |
| ! | TTGCACCGGCAGCTTGGTGA+TGG | + | Chr5:5301788-5301807 | MsG0580024466.01.T01:CDS | 60.0% |
| !! | GCTTGGTGATGGTGGCTGCA+AGG | + | Chr5:5301799-5301818 | MsG0580024466.01.T01:CDS | 60.0% |
| ACCAAGCCGACCGAGCGTAC+CGG | + | Chr5:5301727-5301746 | MsG0580024466.01.T01:CDS | 65.0% | |
| CGGTCAGCGCGTGTGTCTCT+AGG | + | Chr5:5301747-5301766 | MsG0580024466.01.T01:CDS | 65.0% | |
| GGTGAGCTCAGCTTAGCCGG+TGG | + | Chr5:5300939-5300958 | MsG0580024466.01.T01:CDS | 65.0% | |
| !! | CACCGGCAGCTTGGTGATGG+TGG | + | Chr5:5301791-5301810 | MsG0580024466.01.T01:CDS | 65.0% |
| ACCGGTACGCTCGGTCGGCT+TGG | - | Chr5:5301731-5301750 | None:intergenic | 70.0% | |
| AGCTTAGCCGGTGGCGCGCT+CGG | + | Chr5:5300948-5300967 | MsG0580024466.01.T01:CDS | 70.0% | |
| AGTGAACCCGAGCGCGCCAC+CGG | - | Chr5:5300958-5300977 | None:intergenic | 70.0% | |
| CGCTGACCGGTACGCTCGGT+CGG | - | Chr5:5301736-5301755 | None:intergenic | 70.0% | |
| ! | CACGCGCTGACCGGTACGCT+CGG | - | Chr5:5301740-5301759 | None:intergenic | 70.0% |
| ! | CGCAGGTTGCACCGGCAGCT+TGG | + | Chr5:5301782-5301801 | MsG0580024466.01.T01:CDS | 70.0% |
| GCTTAGCCGGTGGCGCGCTC+GGG | + | Chr5:5300949-5300968 | MsG0580024466.01.T01:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 5300771 | 5302243 | 5300771 | ID=MsG0580024466.01;Name=MsG0580024466.01 |
| Chr5 | mRNA | 5300771 | 5302243 | 5300771 | ID=MsG0580024466.01.T01;Parent=MsG0580024466.01;Name=MsG0580024466.01.T01;_AED=0.22;_eAED=0.22;_QI=0|0|0|1|1|1|3|0|417 |
| Chr5 | exon | 5300771 | 5301368 | 5300771 | ID=MsG0580024466.01.T01:exon:19020;Parent=MsG0580024466.01.T01 |
| Chr5 | exon | 5301448 | 5301969 | 5301448 | ID=MsG0580024466.01.T01:exon:19021;Parent=MsG0580024466.01.T01 |
| Chr5 | exon | 5302110 | 5302243 | 5302110 | ID=MsG0580024466.01.T01:exon:19022;Parent=MsG0580024466.01.T01 |
| Chr5 | CDS | 5300771 | 5301368 | 5300771 | ID=MsG0580024466.01.T01:cds;Parent=MsG0580024466.01.T01 |
| Chr5 | CDS | 5301448 | 5301969 | 5301448 | ID=MsG0580024466.01.T01:cds;Parent=MsG0580024466.01.T01 |
| Chr5 | CDS | 5302110 | 5302243 | 5302110 | ID=MsG0580024466.01.T01:cds;Parent=MsG0580024466.01.T01 |
| Gene Sequence |
| Protein sequence |
