Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580024415.01.T01 | XP_003611148.1 | 99.258 | 539 | 2 | 2 | 1 | 537 | 1 | 539 | 0 | 1075 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580024415.01.T01 | O82752 | 69.008 | 484 | 143 | 3 | 40 | 516 | 1 | 484 | 0 | 616 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580024415.01.T01 | G7KDH1 | 99.258 | 539 | 2 | 2 | 1 | 537 | 1 | 539 | 0.0 | 1075 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180003240.01 | MsG0580024415.01 | 0.805234 | 1.472826e-49 | 7.751337e-47 |
MsG0280011473.01 | MsG0580024415.01 | 0.816866 | 4.433446e-52 | 3.178578e-49 |
MsG0580024415.01 | MsG0580027073.01 | 0.816921 | 4.309868e-52 | 3.094550e-49 |
MsG0580024415.01 | MsG0580027227.01 | 0.813144 | 2.969967e-51 | 1.923931e-48 |
MsG0580024415.01 | MsG0780039334.01 | 0.828936 | 6.812379e-55 | 6.869649e-52 |
PPI
Gene1 | Gene2 | Type |
---|---|---|
MsG0480019290.01 | MsG0580024415.01 | PPI |
MsG0580024466.01 | MsG0580024415.01 | PPI |
MsG0580024415.01 | MsG0680030296.01 | PPI |
MsG0580024415.01 | MsG0780039979.01 | PPI |
MsG0280007953.01 | MsG0580024415.01 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580024415.01.T01 | MTR_5g010830 | 99.258 | 539 | 2 | 2 | 1 | 537 | 1 | 539 | 0.0 | 1075 |
MsG0580024415.01.T01 | MTR_1g101500 | 67.351 | 536 | 155 | 5 | 1 | 521 | 1 | 531 | 0.0 | 705 |
MsG0580024415.01.T01 | MTR_0039s0080 | 66.085 | 516 | 154 | 4 | 16 | 526 | 3 | 502 | 0.0 | 671 |
MsG0580024415.01.T01 | MTR_5g067460 | 57.529 | 518 | 211 | 2 | 1 | 518 | 1 | 509 | 0.0 | 610 |
MsG0580024415.01.T01 | MTR_3g111020 | 55.827 | 532 | 208 | 5 | 32 | 536 | 13 | 544 | 0.0 | 588 |
MsG0580024415.01.T01 | MTR_6g088805 | 53.066 | 473 | 219 | 1 | 47 | 519 | 10 | 479 | 0.0 | 526 |
MsG0580024415.01.T01 | MTR_8g102430 | 52.632 | 456 | 196 | 2 | 51 | 506 | 10 | 445 | 4.69e-173 | 496 |
MsG0580024415.01.T01 | MTR_4g027920 | 52.371 | 464 | 218 | 2 | 64 | 524 | 156 | 619 | 5.10e-168 | 490 |
MsG0580024415.01.T01 | MTR_6g043810 | 48.049 | 487 | 235 | 5 | 47 | 518 | 6 | 489 | 9.12e-161 | 467 |
MsG0580024415.01.T01 | MTR_6g043810 | 48.049 | 487 | 235 | 5 | 47 | 518 | 16 | 499 | 1.74e-160 | 467 |
MsG0580024415.01.T01 | MTR_2g435930 | 42.770 | 491 | 259 | 5 | 52 | 521 | 5 | 494 | 2.03e-133 | 397 |
MsG0580024415.01.T01 | MTR_6g081410 | 34.483 | 464 | 302 | 1 | 52 | 513 | 13 | 476 | 6.98e-93 | 292 |
MsG0580024415.01.T01 | MTR_5g011540 | 38.210 | 458 | 276 | 4 | 60 | 513 | 39 | 493 | 4.32e-91 | 288 |
MsG0580024415.01.T01 | MTR_6g081810 | 33.263 | 475 | 285 | 3 | 42 | 513 | 5 | 450 | 1.31e-88 | 280 |
MsG0580024415.01.T01 | MTR_8g106670 | 36.283 | 452 | 272 | 7 | 61 | 504 | 9 | 452 | 1.52e-87 | 278 |
MsG0580024415.01.T01 | MTR_6g066380 | 33.753 | 477 | 308 | 3 | 42 | 513 | 5 | 478 | 5.60e-87 | 277 |
MsG0580024415.01.T01 | MTR_6g081780 | 33.407 | 455 | 301 | 1 | 52 | 504 | 13 | 467 | 8.83e-87 | 276 |
MsG0580024415.01.T01 | MTR_6g081400 | 33.626 | 455 | 293 | 3 | 64 | 513 | 15 | 465 | 2.52e-86 | 275 |
MsG0580024415.01.T01 | MTR_6g081300 | 35.227 | 440 | 285 | 0 | 63 | 502 | 9 | 448 | 7.98e-86 | 273 |
MsG0580024415.01.T01 | MTR_1g108840 | 32.895 | 456 | 300 | 2 | 52 | 504 | 29 | 481 | 1.04e-83 | 269 |
MsG0580024415.01.T01 | MTR_1g108810 | 33.913 | 460 | 287 | 6 | 47 | 498 | 18 | 468 | 7.48e-82 | 263 |
MsG0580024415.01.T01 | MTR_6g081240 | 34.325 | 437 | 285 | 2 | 63 | 498 | 9 | 444 | 2.94e-81 | 261 |
MsG0580024415.01.T01 | MTR_6g081310 | 35.664 | 429 | 260 | 4 | 88 | 502 | 20 | 446 | 9.18e-80 | 258 |
MsG0580024415.01.T01 | MTR_6g004220 | 32.700 | 474 | 298 | 8 | 39 | 504 | 4 | 464 | 7.59e-77 | 250 |
MsG0580024415.01.T01 | MTR_2g078930 | 32.657 | 493 | 308 | 5 | 25 | 514 | 16 | 487 | 2.62e-76 | 249 |
MsG0580024415.01.T01 | MTR_6g081390 | 31.674 | 442 | 301 | 1 | 64 | 504 | 12 | 453 | 7.25e-76 | 247 |
MsG0580024415.01.T01 | MTR_7g082810 | 31.770 | 469 | 305 | 6 | 56 | 515 | 13 | 475 | 4.68e-74 | 243 |
MsG0580024415.01.T01 | MTR_6g004220 | 32.135 | 473 | 300 | 8 | 34 | 498 | 6 | 465 | 1.20e-73 | 243 |
MsG0580024415.01.T01 | MTR_2g079020 | 31.864 | 499 | 310 | 6 | 33 | 527 | 18 | 490 | 2.60e-73 | 242 |
MsG0580024415.01.T01 | MTR_2g078970 | 32.484 | 471 | 300 | 5 | 61 | 527 | 28 | 484 | 8.70e-72 | 237 |
MsG0580024415.01.T01 | MTR_2g088400 | 29.730 | 444 | 311 | 1 | 72 | 514 | 60 | 503 | 4.52e-71 | 236 |
MsG0580024415.01.T01 | MTR_1g109060 | 33.406 | 458 | 295 | 4 | 63 | 515 | 23 | 475 | 9.07e-70 | 231 |
MsG0580024415.01.T01 | MTR_2g078960 | 34.086 | 443 | 269 | 5 | 61 | 492 | 30 | 460 | 6.34e-68 | 227 |
MsG0580024415.01.T01 | MTR_4g048000 | 28.222 | 450 | 322 | 1 | 65 | 513 | 65 | 514 | 3.05e-67 | 226 |
MsG0580024415.01.T01 | MTR_8g069470 | 28.932 | 515 | 331 | 10 | 18 | 516 | 16 | 511 | 4.43e-67 | 226 |
MsG0580024415.01.T01 | MTR_1g109060 | 33.030 | 439 | 288 | 2 | 63 | 498 | 23 | 458 | 4.81e-67 | 225 |
MsG0580024415.01.T01 | MTR_1g108990 | 31.866 | 477 | 313 | 6 | 40 | 510 | 1 | 471 | 3.27e-66 | 222 |
MsG0580024415.01.T01 | MTR_2g022980 | 29.099 | 433 | 307 | 0 | 72 | 504 | 56 | 488 | 2.56e-62 | 213 |
MsG0580024415.01.T01 | MTR_2g088400 | 30.151 | 398 | 278 | 0 | 72 | 469 | 60 | 457 | 1.61e-61 | 209 |
MsG0580024415.01.T01 | MTR_1g021740 | 30.112 | 445 | 298 | 5 | 65 | 503 | 36 | 473 | 1.65e-60 | 207 |
MsG0580024415.01.T01 | MTR_7g082800 | 31.750 | 400 | 259 | 5 | 123 | 515 | 1 | 393 | 2.58e-59 | 202 |
MsG0580024415.01.T01 | MTR_6g004220 | 33.077 | 390 | 240 | 8 | 34 | 415 | 6 | 382 | 4.18e-59 | 202 |
MsG0580024415.01.T01 | MTR_5g032720 | 29.075 | 454 | 318 | 3 | 65 | 516 | 37 | 488 | 1.15e-57 | 200 |
MsG0580024415.01.T01 | MTR_6g047610 | 27.984 | 486 | 337 | 4 | 40 | 517 | 1 | 481 | 1.48e-57 | 199 |
MsG0580024415.01.T01 | MTR_8g063590 | 31.567 | 434 | 286 | 7 | 87 | 514 | 76 | 504 | 3.45e-57 | 199 |
MsG0580024415.01.T01 | MTR_5g032750 | 30.108 | 465 | 314 | 6 | 47 | 503 | 14 | 475 | 4.29e-56 | 196 |
MsG0580024415.01.T01 | MTR_1g100180 | 28.958 | 480 | 321 | 7 | 51 | 526 | 34 | 497 | 3.31e-55 | 194 |
MsG0580024415.01.T01 | MTR_6g047640 | 28.747 | 487 | 314 | 6 | 40 | 517 | 1 | 463 | 5.27e-55 | 192 |
MsG0580024415.01.T01 | MTR_7g087410 | 27.887 | 459 | 322 | 3 | 64 | 518 | 31 | 484 | 1.38e-54 | 192 |
MsG0580024415.01.T01 | MTR_5g033100 | 26.719 | 509 | 347 | 7 | 18 | 519 | 21 | 510 | 3.74e-54 | 191 |
MsG0580024415.01.T01 | MTR_5g090290 | 31.333 | 450 | 297 | 5 | 87 | 531 | 69 | 511 | 4.32e-54 | 192 |
MsG0580024415.01.T01 | MTR_6g047640 | 29.158 | 487 | 331 | 5 | 40 | 517 | 1 | 482 | 5.15e-53 | 187 |
MsG0580024415.01.T01 | MTR_6g047590 | 28.298 | 470 | 324 | 4 | 40 | 501 | 1 | 465 | 3.23e-52 | 185 |
MsG0580024415.01.T01 | MTR_7g087400 | 26.696 | 457 | 325 | 4 | 64 | 516 | 30 | 480 | 2.89e-51 | 182 |
MsG0580024415.01.T01 | MTR_3g099700 | 25.646 | 503 | 355 | 7 | 31 | 520 | 6 | 502 | 4.47e-49 | 177 |
MsG0580024415.01.T01 | MTR_6g004220 | 33.538 | 325 | 201 | 6 | 34 | 354 | 6 | 319 | 4.68e-48 | 170 |
MsG0580024415.01.T01 | MTR_7g087410 | 26.768 | 396 | 289 | 1 | 123 | 518 | 1 | 395 | 3.97e-47 | 169 |
MsG0580024415.01.T01 | MTR_3g099720 | 24.795 | 488 | 359 | 3 | 34 | 514 | 4 | 490 | 8.33e-47 | 171 |
MsG0580024415.01.T01 | MTR_6g027200 | 25.702 | 463 | 323 | 3 | 64 | 516 | 36 | 487 | 1.18e-45 | 167 |
MsG0580024415.01.T01 | MTR_6g027190 | 26.569 | 478 | 322 | 6 | 53 | 516 | 13 | 475 | 1.06e-43 | 162 |
MsG0580024415.01.T01 | MTR_7g087430 | 27.089 | 395 | 287 | 1 | 123 | 517 | 1 | 394 | 9.27e-43 | 157 |
MsG0580024415.01.T01 | MTR_7g087370 | 24.528 | 477 | 321 | 5 | 44 | 516 | 10 | 451 | 1.64e-42 | 158 |
MsG0580024415.01.T01 | MTR_2g078990 | 29.630 | 324 | 210 | 5 | 208 | 527 | 4 | 313 | 1.49e-37 | 141 |
MsG0580024415.01.T01 | MTR_5g087930 | 28.715 | 397 | 260 | 4 | 81 | 476 | 43 | 417 | 3.26e-37 | 143 |
MsG0580024415.01.T01 | MTR_5g090280 | 26.995 | 426 | 268 | 6 | 126 | 520 | 4 | 417 | 5.40e-26 | 110 |
MsG0580024415.01.T01 | MTR_2g079030 | 32.159 | 227 | 140 | 5 | 303 | 527 | 319 | 533 | 1.33e-25 | 110 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580024415.01.T01 | AT4G23030 | 69.008 | 484 | 143 | 3 | 40 | 516 | 1 | 484 | 0.0 | 616 |
MsG0580024415.01.T01 | AT1G58340 | 62.335 | 454 | 171 | 0 | 54 | 507 | 47 | 500 | 0.0 | 558 |
MsG0580024415.01.T01 | AT4G29140 | 56.118 | 474 | 204 | 2 | 62 | 535 | 53 | 522 | 0.0 | 553 |
MsG0580024415.01.T01 | AT5G52050 | 55.556 | 495 | 208 | 4 | 34 | 518 | 5 | 497 | 0.0 | 547 |
MsG0580024415.01.T01 | AT5G19700 | 53.469 | 490 | 217 | 1 | 23 | 512 | 5 | 483 | 0.0 | 542 |
MsG0580024415.01.T01 | AT2G38510 | 50.218 | 458 | 227 | 1 | 64 | 520 | 5 | 462 | 3.06e-169 | 488 |
MsG0580024415.01.T01 | AT1G71870 | 46.735 | 490 | 243 | 3 | 47 | 518 | 6 | 495 | 1.93e-156 | 456 |
MsG0580024415.01.T01 | AT5G49130 | 46.004 | 463 | 232 | 3 | 63 | 509 | 24 | 484 | 8.48e-134 | 398 |
MsG0580024415.01.T01 | AT4G22790 | 40.851 | 470 | 264 | 10 | 56 | 518 | 21 | 483 | 1.33e-92 | 292 |
MsG0580024415.01.T01 | AT1G71140 | 33.839 | 461 | 292 | 6 | 54 | 509 | 18 | 470 | 3.74e-82 | 265 |
MsG0580024415.01.T01 | AT5G52450 | 33.874 | 493 | 299 | 7 | 39 | 522 | 11 | 485 | 8.26e-82 | 263 |
MsG0580024415.01.T01 | AT2G04070 | 34.316 | 475 | 306 | 4 | 40 | 510 | 1 | 473 | 2.10e-81 | 262 |
MsG0580024415.01.T01 | AT2G34360 | 34.016 | 488 | 290 | 10 | 37 | 514 | 5 | 470 | 6.41e-81 | 261 |
MsG0580024415.01.T01 | AT1G73700 | 34.232 | 482 | 305 | 4 | 39 | 516 | 3 | 476 | 9.58e-81 | 260 |
MsG0580024415.01.T01 | AT2G04080 | 33.262 | 469 | 306 | 3 | 40 | 504 | 1 | 466 | 3.61e-80 | 259 |
MsG0580024415.01.T01 | AT2G04050 | 34.395 | 471 | 296 | 4 | 44 | 510 | 12 | 473 | 3.42e-78 | 254 |
MsG0580024415.01.T01 | AT2G04080 | 32.903 | 465 | 305 | 3 | 40 | 500 | 1 | 462 | 9.58e-77 | 250 |
MsG0580024415.01.T01 | AT1G15150 | 31.360 | 456 | 309 | 2 | 65 | 518 | 31 | 484 | 1.49e-75 | 247 |
MsG0580024415.01.T01 | AT2G04040 | 32.506 | 443 | 293 | 2 | 65 | 504 | 27 | 466 | 1.52e-75 | 247 |
MsG0580024415.01.T01 | AT1G15170 | 33.933 | 445 | 284 | 4 | 65 | 504 | 34 | 473 | 1.31e-74 | 244 |
MsG0580024415.01.T01 | AT1G15160 | 31.590 | 478 | 319 | 3 | 47 | 518 | 9 | 484 | 2.75e-74 | 244 |
MsG0580024415.01.T01 | AT2G04090 | 32.506 | 443 | 293 | 2 | 65 | 504 | 30 | 469 | 1.11e-72 | 239 |
MsG0580024415.01.T01 | AT2G04100 | 32.506 | 443 | 293 | 2 | 65 | 504 | 30 | 469 | 1.82e-72 | 239 |
MsG0580024415.01.T01 | AT1G66760 | 32.495 | 477 | 304 | 7 | 36 | 504 | 1 | 467 | 3.17e-72 | 238 |
MsG0580024415.01.T01 | AT1G64820 | 31.590 | 478 | 306 | 6 | 61 | 523 | 25 | 496 | 5.56e-72 | 238 |
MsG0580024415.01.T01 | AT1G61890 | 28.827 | 503 | 346 | 6 | 18 | 516 | 2 | 496 | 2.20e-71 | 237 |
MsG0580024415.01.T01 | AT3G23550 | 33.260 | 454 | 292 | 3 | 47 | 497 | 18 | 463 | 7.72e-71 | 234 |
MsG0580024415.01.T01 | AT2G04100 | 32.494 | 437 | 289 | 2 | 65 | 498 | 30 | 463 | 8.50e-70 | 231 |
MsG0580024415.01.T01 | AT1G66760 | 32.272 | 471 | 301 | 7 | 36 | 498 | 1 | 461 | 8.50e-70 | 231 |
MsG0580024415.01.T01 | AT1G66780 | 31.878 | 458 | 302 | 4 | 52 | 504 | 22 | 474 | 2.48e-68 | 228 |
MsG0580024415.01.T01 | AT2G34360 | 31.134 | 485 | 266 | 8 | 37 | 514 | 5 | 428 | 3.89e-68 | 226 |
MsG0580024415.01.T01 | AT1G11670 | 29.213 | 445 | 311 | 2 | 62 | 504 | 47 | 489 | 5.08e-68 | 228 |
MsG0580024415.01.T01 | AT1G15180 | 31.799 | 478 | 316 | 4 | 31 | 504 | 3 | 474 | 5.23e-68 | 227 |
MsG0580024415.01.T01 | AT1G61890 | 28.660 | 485 | 336 | 5 | 18 | 498 | 2 | 480 | 1.17e-67 | 227 |
MsG0580024415.01.T01 | AT3G23560 | 34.845 | 419 | 263 | 5 | 63 | 476 | 37 | 450 | 3.16e-67 | 225 |
MsG0580024415.01.T01 | AT3G21690 | 27.079 | 469 | 338 | 1 | 47 | 515 | 38 | 502 | 1.84e-64 | 218 |
MsG0580024415.01.T01 | AT4G21910 | 27.701 | 509 | 342 | 5 | 24 | 513 | 2 | 503 | 7.38e-64 | 217 |
MsG0580024415.01.T01 | AT4G21910 | 27.701 | 509 | 342 | 5 | 24 | 513 | 2 | 503 | 7.38e-64 | 217 |
MsG0580024415.01.T01 | AT4G21910 | 29.111 | 450 | 317 | 2 | 65 | 513 | 57 | 505 | 2.16e-62 | 213 |
MsG0580024415.01.T01 | AT4G21910 | 29.111 | 450 | 317 | 2 | 65 | 513 | 57 | 505 | 2.16e-62 | 213 |
MsG0580024415.01.T01 | AT3G59030 | 29.630 | 459 | 315 | 2 | 61 | 515 | 47 | 501 | 4.70e-62 | 212 |
MsG0580024415.01.T01 | AT3G26590 | 27.983 | 461 | 325 | 4 | 65 | 523 | 45 | 500 | 5.49e-62 | 212 |
MsG0580024415.01.T01 | AT1G61890 | 30.402 | 398 | 277 | 0 | 65 | 462 | 47 | 444 | 1.80e-61 | 210 |
MsG0580024415.01.T01 | AT1G15170 | 34.097 | 349 | 220 | 4 | 161 | 504 | 11 | 354 | 1.76e-59 | 201 |
MsG0580024415.01.T01 | AT1G23300 | 28.235 | 510 | 339 | 9 | 18 | 518 | 5 | 496 | 5.08e-59 | 204 |
MsG0580024415.01.T01 | AT5G38030 | 27.991 | 443 | 310 | 5 | 65 | 503 | 45 | 482 | 9.74e-59 | 203 |
MsG0580024415.01.T01 | AT4G00350 | 26.233 | 507 | 362 | 4 | 13 | 518 | 44 | 539 | 3.71e-57 | 200 |
MsG0580024415.01.T01 | AT4G21903 | 28.205 | 429 | 306 | 2 | 88 | 515 | 76 | 503 | 1.23e-56 | 197 |
MsG0580024415.01.T01 | AT3G23560 | 34.682 | 346 | 219 | 3 | 63 | 405 | 37 | 378 | 4.91e-56 | 194 |
MsG0580024415.01.T01 | AT1G12950 | 27.578 | 446 | 310 | 5 | 65 | 504 | 67 | 505 | 5.13e-56 | 196 |
MsG0580024415.01.T01 | AT5G10420 | 31.140 | 456 | 302 | 5 | 65 | 512 | 38 | 489 | 1.22e-55 | 194 |
MsG0580024415.01.T01 | AT3G26590 | 27.595 | 395 | 281 | 3 | 126 | 518 | 4 | 395 | 1.78e-55 | 192 |
MsG0580024415.01.T01 | AT1G47530 | 26.316 | 475 | 337 | 6 | 37 | 503 | 3 | 472 | 2.84e-55 | 193 |
MsG0580024415.01.T01 | AT1G15150 | 30.833 | 360 | 245 | 2 | 161 | 518 | 11 | 368 | 3.73e-55 | 190 |
MsG0580024415.01.T01 | AT4G21903 | 28.571 | 392 | 279 | 1 | 126 | 516 | 4 | 395 | 3.94e-54 | 188 |
MsG0580024415.01.T01 | AT5G44050 | 30.512 | 449 | 292 | 8 | 65 | 503 | 40 | 478 | 7.35e-54 | 190 |
MsG0580024415.01.T01 | AT4G21903 | 27.703 | 444 | 308 | 4 | 88 | 531 | 76 | 506 | 1.44e-53 | 189 |
MsG0580024415.01.T01 | AT1G66760 | 30.923 | 401 | 263 | 5 | 36 | 430 | 1 | 393 | 2.58e-52 | 183 |
MsG0580024415.01.T01 | AT5G65380 | 30.258 | 466 | 306 | 9 | 47 | 502 | 18 | 474 | 3.35e-52 | 185 |
MsG0580024415.01.T01 | AT1G33090 | 30.193 | 467 | 304 | 8 | 65 | 517 | 36 | 494 | 2.89e-51 | 183 |
MsG0580024415.01.T01 | AT4G25640 | 29.011 | 455 | 317 | 2 | 64 | 514 | 33 | 485 | 2.99e-51 | 182 |
MsG0580024415.01.T01 | AT4G25640 | 29.011 | 455 | 317 | 2 | 64 | 514 | 33 | 485 | 4.83e-51 | 182 |
MsG0580024415.01.T01 | AT1G33100 | 28.726 | 463 | 316 | 6 | 65 | 517 | 33 | 491 | 1.93e-50 | 181 |
MsG0580024415.01.T01 | AT1G33110 | 28.205 | 468 | 322 | 8 | 39 | 498 | 7 | 468 | 6.02e-49 | 176 |
MsG0580024415.01.T01 | AT1G33080 | 26.767 | 467 | 334 | 4 | 37 | 498 | 5 | 468 | 1.32e-47 | 173 |
MsG0580024415.01.T01 | AT1G33080 | 26.767 | 467 | 334 | 4 | 37 | 498 | 5 | 468 | 2.92e-47 | 172 |
MsG0580024415.01.T01 | AT3G59030 | 30.749 | 374 | 251 | 2 | 61 | 430 | 47 | 416 | 1.36e-46 | 168 |
MsG0580024415.01.T01 | AT1G47530 | 26.440 | 382 | 272 | 5 | 127 | 504 | 5 | 381 | 5.26e-46 | 166 |
MsG0580024415.01.T01 | AT5G17700 | 26.105 | 475 | 333 | 9 | 39 | 504 | 7 | 472 | 5.58e-45 | 166 |
MsG0580024415.01.T01 | AT5G17700 | 26.105 | 475 | 333 | 9 | 39 | 504 | 7 | 472 | 5.58e-45 | 166 |
MsG0580024415.01.T01 | AT3G03620 | 26.596 | 470 | 330 | 7 | 64 | 526 | 36 | 497 | 1.25e-43 | 162 |
MsG0580024415.01.T01 | AT3G03620 | 26.596 | 470 | 330 | 7 | 64 | 526 | 36 | 497 | 1.25e-43 | 162 |
MsG0580024415.01.T01 | AT4G25640 | 28.784 | 403 | 285 | 1 | 64 | 466 | 33 | 433 | 4.51e-43 | 160 |
MsG0580024415.01.T01 | AT1G66760 | 31.563 | 339 | 216 | 6 | 168 | 498 | 3 | 333 | 1.82e-41 | 152 |
MsG0580024415.01.T01 | AT1G33110 | 27.569 | 399 | 279 | 6 | 39 | 431 | 7 | 401 | 1.67e-34 | 135 |
MsG0580024415.01.T01 | AT1G15180 | 32.308 | 260 | 170 | 2 | 161 | 417 | 11 | 267 | 3.17e-34 | 134 |
MsG0580024415.01.T01 | AT5G17700 | 25.978 | 358 | 251 | 7 | 39 | 388 | 7 | 358 | 1.19e-29 | 121 |
MsG0580024415.01.T01 | AT2G04066 | 32.258 | 124 | 82 | 1 | 381 | 504 | 40 | 161 | 2.88e-14 | 71.2 |
Find 94 sgRNAs with CRISPR-Local
Find 122 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTATTTACATTTGGGTTTC+TGG | 0.044651 | 5:+4593301 | MsG0580024415.01.T01:CDS |
AGGTTTGTGGTTTGGTCTTA+TGG | 0.195458 | 5:+4593921 | MsG0580024415.01.T01:CDS |
TTTCCTTCTTCTTTGAGTTT+TGG | 0.208924 | 5:+4593535 | MsG0580024415.01.T01:CDS |
TGTTTGAATGTTGGGGATTT+AGG | 0.209468 | 5:-4592650 | None:intergenic |
TTAGGCGCAAATATAAATTT+AGG | 0.214567 | 5:+4593832 | MsG0580024415.01.T01:CDS |
CCTATTTGTGGTCAAGCTTT+TGG | 0.243633 | 5:+4592899 | MsG0580024415.01.T01:CDS |
TTGACAAGAAAATAGTTTAT+AGG | 0.246031 | 5:-4593205 | None:intergenic |
GGTTACAATGTTGTTTGTTT+TGG | 0.270469 | 5:+4593963 | MsG0580024415.01.T01:CDS |
TTTCGCTGATTATTTACATT+TGG | 0.272638 | 5:+4593293 | MsG0580024415.01.T01:CDS |
ACATGCAACTGTTGCATCTA+TGG | 0.280637 | 5:+4593477 | MsG0580024415.01.T01:CDS |
TTCGCTGATTATTTACATTT+GGG | 0.298088 | 5:+4593294 | MsG0580024415.01.T01:CDS |
TTTATATTTGCGCCTAATTT+CGG | 0.301593 | 5:-4593826 | None:intergenic |
GTTTGAATGTTGGGGATTTA+GGG | 0.310488 | 5:-4592649 | None:intergenic |
TCTTGTCAATGTTCTTCAAT+TGG | 0.313344 | 5:+4593219 | MsG0580024415.01.T01:CDS |
ATTGGATTTGCAAACATAAC+AGG | 0.318839 | 5:+4592839 | MsG0580024415.01.T01:CDS |
GGAATAAGAGGAATCGCTTT+AGG | 0.319468 | 5:+4593241 | MsG0580024415.01.T01:CDS |
AAAGTAGCACTATATGTTAA+AGG | 0.335752 | 5:-4593163 | None:intergenic |
CTTGTCAATGTTCTTCAATT+GGG | 0.346715 | 5:+4593220 | MsG0580024415.01.T01:CDS |
GTTTGGTTGAGTTTCTTTGC+TGG | 0.349890 | 5:+4593886 | MsG0580024415.01.T01:CDS |
GATTTCAAAGGTTTGTGGTT+TGG | 0.352902 | 5:+4593913 | MsG0580024415.01.T01:CDS |
TCAATGGTGTTACCGATTAT+AGG | 0.360217 | 5:+4593739 | MsG0580024415.01.T01:CDS |
GTTCTTCAATTGGGAATAAG+AGG | 0.367653 | 5:+4593229 | MsG0580024415.01.T01:CDS |
CCAAAAGCTTGACCACAAAT+AGG | 0.369074 | 5:-4592899 | None:intergenic |
CGTTTGCTATATCTTCTTGT+TGG | 0.374870 | 5:-4593042 | None:intergenic |
TGCTATGTTTGAAATATGTT+TGG | 0.394695 | 5:-4592711 | None:intergenic |
ATCATTTCAATGTTGTTCCT+TGG | 0.403969 | 5:+4592776 | MsG0580024415.01.T01:CDS |
CCTCTGCTTGTTTCAAAGGA+TGG | 0.406928 | 5:+4593353 | MsG0580024415.01.T01:CDS |
AATGATTGTGCTACAAGATC+AGG | 0.410062 | 5:-4593094 | None:intergenic |
TTGTGGATATATTATTTGTT+TGG | 0.410448 | 5:-4592574 | None:intergenic |
AGCAATTCCAAGCTGCATTT+CGG | 0.410449 | 5:+4593393 | MsG0580024415.01.T01:CDS |
CTCTGGTCTTGCCATGGGAA+TGG | 0.412093 | 5:+4592874 | MsG0580024415.01.T01:CDS |
AATAATTGCTTTAACATCAA+TGG | 0.417803 | 5:+4593723 | MsG0580024415.01.T01:CDS |
ATTTCCTCTGCTTGTTTCAA+AGG | 0.418055 | 5:+4593349 | MsG0580024415.01.T01:CDS |
GAATCGCTTTAGGTTCCGTT+TGG | 0.418185 | 5:+4593251 | MsG0580024415.01.T01:CDS |
GCTAAAAGATTCAAACTCCT+TGG | 0.419870 | 5:+4592923 | MsG0580024415.01.T01:CDS |
GGAACGGCGAGGCCGAAATT+AGG | 0.422373 | 5:+4593814 | MsG0580024415.01.T01:CDS |
ATATGTTAAAGGAAGTGTTA+TGG | 0.428714 | 5:-4593152 | None:intergenic |
AAACTCAACCAAACTGCAAC+AGG | 0.430260 | 5:-4593877 | None:intergenic |
AGCTCACATAGTCCTATAAT+CGG | 0.440906 | 5:-4593751 | None:intergenic |
GCAGGTGGGTCACTTGCCAT+TGG | 0.441197 | 5:+4592821 | MsG0580024415.01.T01:CDS |
CATTCTCTCTGGTCTTGCCA+TGG | 0.443498 | 5:+4592868 | MsG0580024415.01.T01:CDS |
GCAAAACTTGCAGCAATAGT+TGG | 0.450295 | 5:+4593607 | MsG0580024415.01.T01:CDS |
TTTGGTGTTTCAACAAGAGT+TGG | 0.450548 | 5:+4593553 | MsG0580024415.01.T01:CDS |
GATGTTAAAGCAATTATTTG+TGG | 0.453850 | 5:-4593718 | None:intergenic |
TGGGAATGCCTGTTGCAGTT+TGG | 0.457141 | 5:+4593869 | MsG0580024415.01.T01:CDS |
GTTGGTGAGCTTGCTTTAGC+AGG | 0.461842 | 5:+4592803 | MsG0580024415.01.T01:CDS |
ATCAACGGTGTTAACATGTC+AGG | 0.462592 | 5:-4592626 | None:intergenic |
AAGGAACAACATTGAAATGA+TGG | 0.463159 | 5:-4592774 | None:intergenic |
TTTGCTGGATTTGATTTCAA+AGG | 0.464102 | 5:+4593901 | MsG0580024415.01.T01:CDS |
GATTTGATTTCAAAGGTTTG+TGG | 0.465351 | 5:+4593908 | MsG0580024415.01.T01:CDS |
ATTCTCTCTGGTCTTGCCAT+GGG | 0.465845 | 5:+4592869 | MsG0580024415.01.T01:CDS |
GGCTGCTCAAGGTTCATGTA+TGG | 0.465974 | 5:+4593942 | MsG0580024415.01.T01:CDS |
TTAAAGGAAGTGTTATGGAT+TGG | 0.467103 | 5:-4593147 | None:intergenic |
CGGTTTGTCTCGAATGGTGG+TGG | 0.469476 | 5:+4593413 | MsG0580024415.01.T01:CDS |
CATGGCAAGACCAGAGAGAA+TGG | 0.471209 | 5:-4592867 | None:intergenic |
GCATTTCGGTTTGTCTCGAA+TGG | 0.473600 | 5:+4593407 | MsG0580024415.01.T01:CDS |
CCAAATGTTTCTAACAGAAA+AGG | 0.479393 | 5:-4593674 | None:intergenic |
TTCAAACATAGCATTACCTA+TGG | 0.482369 | 5:+4592721 | MsG0580024415.01.T01:CDS |
AATATGTTTGGCTTCATTGA+GGG | 0.484804 | 5:-4592699 | None:intergenic |
TTCAAGTGAAGAAGAACAAG+AGG | 0.495983 | 5:+4594041 | MsG0580024415.01.T01:CDS |
ACAGGTTACTCCATTCTCTC+TGG | 0.501242 | 5:+4592857 | MsG0580024415.01.T01:CDS |
TTTGGTCTTATGGCTGCTCA+AGG | 0.501334 | 5:+4593931 | MsG0580024415.01.T01:CDS |
ACACCACAAACAGTTGTTTG+TGG | 0.502053 | 5:-4593784 | None:intergenic |
GTGAGCTTGCTTTAGCAGGT+GGG | 0.506427 | 5:+4592807 | MsG0580024415.01.T01:CDS |
ACAAGAGTTGGAAATGAACT+TGG | 0.513291 | 5:+4593565 | MsG0580024415.01.T01:CDS |
AAATATGTTTGGCTTCATTG+AGG | 0.523182 | 5:-4592700 | None:intergenic |
ATTATAGGACTATGTGAGCT+TGG | 0.533869 | 5:+4593754 | MsG0580024415.01.T01:CDS |
AATAAACCTGTTAAAACCAT+AGG | 0.534613 | 5:-4592737 | None:intergenic |
CTTCGAAGATAGATTCTCAA+AGG | 0.539810 | 5:-4593124 | None:intergenic |
CATGCAACTGTTGCATCTAT+GGG | 0.545154 | 5:+4593478 | MsG0580024415.01.T01:CDS |
TGTCCACAAACAACTGTTTG+TGG | 0.548402 | 5:+4593781 | MsG0580024415.01.T01:CDS |
ACACCAAAACTCAAAGAAGA+AGG | 0.550180 | 5:-4593538 | None:intergenic |
AGACAAACCGAAATGCAGCT+TGG | 0.556967 | 5:-4593400 | None:intergenic |
CTGGAACACACAAGAAAACA+TGG | 0.559518 | 5:+4593320 | MsG0580024415.01.T01:CDS |
TTCTTTGCATTGTTAAACCA+AGG | 0.562087 | 5:-4592940 | None:intergenic |
GGTGAGCTTGCTTTAGCAGG+TGG | 0.562489 | 5:+4592806 | MsG0580024415.01.T01:CDS |
CCATCCTTTGAAACAAGCAG+AGG | 0.563274 | 5:-4593353 | None:intergenic |
GTTATTGCTTTCATACAAAG+TGG | 0.571039 | 5:-4592549 | None:intergenic |
ATGTTGTTCCTTGGTCGTGT+TGG | 0.573577 | 5:+4592785 | MsG0580024415.01.T01:CDS |
TGTTATGTTTGCAAATCCAA+TGG | 0.576457 | 5:-4592837 | None:intergenic |
TTCGAAGATAGATTCTCAAA+GGG | 0.581553 | 5:-4593123 | None:intergenic |
GAGGTTGAAATTCGTCCAAA+CGG | 0.590488 | 5:-4593266 | None:intergenic |
GTTGGGGATTTAGGGATCAA+CGG | 0.596686 | 5:-4592641 | None:intergenic |
TTTCGGTTTGTCTCGAATGG+TGG | 0.608886 | 5:+4593410 | MsG0580024415.01.T01:CDS |
ATGGGAATGGAACCTATTTG+TGG | 0.610601 | 5:+4592887 | MsG0580024415.01.T01:CDS |
AAATCAAGCAGAGAGAGCTA+AGG | 0.614779 | 5:+4594002 | MsG0580024415.01.T01:CDS |
ACAAATAGGTTCCATTCCCA+TGG | 0.616628 | 5:-4592885 | None:intergenic |
ACACACAAGAAAACATGGAG+TGG | 0.626414 | 5:+4593325 | MsG0580024415.01.T01:CDS |
ATTATCAACTCAAGTTCATG+TGG | 0.629140 | 5:+4594075 | MsG0580024415.01.T01:CDS |
CAAGCTCACCAACACGACCA+AGG | 0.635498 | 5:-4592793 | None:intergenic |
TTCATACAAAGTGGAGACAG+AGG | 0.650487 | 5:-4592540 | None:intergenic |
ATAGATGCAACAGTTGCATG+TGG | 0.665559 | 5:-4593475 | None:intergenic |
TGATGATGATAACTTGCACA+TGG | 0.742527 | 5:-4592513 | None:intergenic |
AAATAATCAGCGAAACAACG+AGG | 0.748054 | 5:-4593285 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAATTGCTTTAACATCAA+TGG | + | Chr5:4593723-4593742 | MsG0580024415.01.T01:CDS | 20.0% |
!! | TTGACAAGAAAATAGTTTAT+AGG | - | Chr5:4593208-4593227 | None:intergenic | 20.0% |
!! | TTGTGGATATATTATTTGTT+TGG | - | Chr5:4592577-4592596 | None:intergenic | 20.0% |
!!! | AAGAGATTATTACTTTTATG+TGG | + | Chr5:4593019-4593038 | MsG0580024415.01.T01:CDS | 20.0% |
!!! | CAATTTTCATTTCATTCTTA+TGG | + | Chr5:4592987-4593006 | MsG0580024415.01.T01:CDS | 20.0% |
! | AAAAATGTATATCAATGCAG+TGG | - | Chr5:4593518-4593537 | None:intergenic | 25.0% |
! | AAAGTAGCACTATATGTTAA+AGG | - | Chr5:4593166-4593185 | None:intergenic | 25.0% |
! | AATAAACCTGTTAAAACCAT+AGG | - | Chr5:4592740-4592759 | None:intergenic | 25.0% |
! | GATGTTAAAGCAATTATTTG+TGG | - | Chr5:4593721-4593740 | None:intergenic | 25.0% |
! | TTAGGCGCAAATATAAATTT+AGG | + | Chr5:4593832-4593851 | MsG0580024415.01.T01:CDS | 25.0% |
! | TTTATATTTGCGCCTAATTT+CGG | - | Chr5:4593829-4593848 | None:intergenic | 25.0% |
!! | AAATCATGATTTTGCTTTGT+GGG | + | Chr5:4593440-4593459 | MsG0580024415.01.T01:CDS | 25.0% |
!! | ATTATTTACATTTGGGTTTC+TGG | + | Chr5:4593301-4593320 | MsG0580024415.01.T01:CDS | 25.0% |
!! | CTTTTCTGTTAGAAACATTT+GGG | + | Chr5:4593675-4593694 | MsG0580024415.01.T01:CDS | 25.0% |
!! | TGCTATGTTTGAAATATGTT+TGG | - | Chr5:4592714-4592733 | None:intergenic | 25.0% |
!! | TTCGCTGATTATTTACATTT+GGG | + | Chr5:4593294-4593313 | MsG0580024415.01.T01:CDS | 25.0% |
!! | TTTCGCTGATTATTTACATT+TGG | + | Chr5:4593293-4593312 | MsG0580024415.01.T01:CDS | 25.0% |
!!! | ATATGTTAAAGGAAGTGTTA+TGG | - | Chr5:4593155-4593174 | None:intergenic | 25.0% |
!!! | ATTATTCTGTGTTTTGATTG+TGG | - | Chr5:4592600-4592619 | None:intergenic | 25.0% |
!!! | TCTTTTGTTGTTTGAATGTT+GGG | - | Chr5:4592661-4592680 | None:intergenic | 25.0% |
!!! | TTAGGTTGTTTTTATCTTGT+GGG | + | Chr5:4593850-4593869 | MsG0580024415.01.T01:CDS | 25.0% |
!!! | TTCTTTTGTTGTTTGAATGT+TGG | - | Chr5:4592662-4592681 | None:intergenic | 25.0% |
!!! | TTTAGGTTGTTTTTATCTTG+TGG | + | Chr5:4593849-4593868 | MsG0580024415.01.T01:CDS | 25.0% |
AAGGAACAACATTGAAATGA+TGG | - | Chr5:4592777-4592796 | None:intergenic | 30.0% | |
ATCATTTCAATGTTGTTCCT+TGG | + | Chr5:4592776-4592795 | MsG0580024415.01.T01:CDS | 30.0% | |
ATTATCAACTCAAGTTCATG+TGG | + | Chr5:4594075-4594094 | MsG0580024415.01.T01:CDS | 30.0% | |
ATTGGATTTGCAAACATAAC+AGG | + | Chr5:4592839-4592858 | MsG0580024415.01.T01:CDS | 30.0% | |
CTTGTCAATGTTCTTCAATT+GGG | + | Chr5:4593220-4593239 | MsG0580024415.01.T01:CDS | 30.0% | |
GTTATTGCTTTCATACAAAG+TGG | - | Chr5:4592552-4592571 | None:intergenic | 30.0% | |
TCTTGTCAATGTTCTTCAAT+TGG | + | Chr5:4593219-4593238 | MsG0580024415.01.T01:CDS | 30.0% | |
TGTTATGTTTGCAAATCCAA+TGG | - | Chr5:4592840-4592859 | None:intergenic | 30.0% | |
TTCAAACATAGCATTACCTA+TGG | + | Chr5:4592721-4592740 | MsG0580024415.01.T01:CDS | 30.0% | |
TTCGAAGATAGATTCTCAAA+GGG | - | Chr5:4593126-4593145 | None:intergenic | 30.0% | |
TTCTTTGCATTGTTAAACCA+AGG | - | Chr5:4592943-4592962 | None:intergenic | 30.0% | |
! | AAATATGTTTGGCTTCATTG+AGG | - | Chr5:4592703-4592722 | None:intergenic | 30.0% |
! | AATATGTTTGGCTTCATTGA+GGG | - | Chr5:4592702-4592721 | None:intergenic | 30.0% |
! | CCAAATGTTTCTAACAGAAA+AGG | - | Chr5:4593677-4593696 | None:intergenic | 30.0% |
! | CCTTTTCTGTTAGAAACATT+TGG | + | Chr5:4593674-4593693 | MsG0580024415.01.T01:CDS | 30.0% |
! | GAAATCATGATTTTGCTTTG+TGG | + | Chr5:4593439-4593458 | MsG0580024415.01.T01:CDS | 30.0% |
! | GATTTGATTTCAAAGGTTTG+TGG | + | Chr5:4593908-4593927 | MsG0580024415.01.T01:CDS | 30.0% |
! | TTTGCTGGATTTGATTTCAA+AGG | + | Chr5:4593901-4593920 | MsG0580024415.01.T01:CDS | 30.0% |
!! | GGTTACAATGTTGTTTGTTT+TGG | + | Chr5:4593963-4593982 | MsG0580024415.01.T01:CDS | 30.0% |
!! | TTAAAGGAAGTGTTATGGAT+TGG | - | Chr5:4593150-4593169 | None:intergenic | 30.0% |
!! | TTTCCTTCTTCTTTGAGTTT+TGG | + | Chr5:4593535-4593554 | MsG0580024415.01.T01:CDS | 30.0% |
!!! | ACTCTGTTTCAGTTTTGTTT+TGG | + | Chr5:4593630-4593649 | MsG0580024415.01.T01:CDS | 30.0% |
!!! | CTCTGTTTCAGTTTTGTTTT+GGG | + | Chr5:4593631-4593650 | MsG0580024415.01.T01:CDS | 30.0% |
!!! | CTTTTGTTGTTTGAATGTTG+GGG | - | Chr5:4592660-4592679 | None:intergenic | 30.0% |
!!! | TGTTTTGGTTCGTACAAATT+GGG | + | Chr5:4593978-4593997 | MsG0580024415.01.T01:CDS | 30.0% |
!!! | TTGTTTTGGTTCGTACAAAT+TGG | + | Chr5:4593977-4593996 | MsG0580024415.01.T01:CDS | 30.0% |
AAATAATCAGCGAAACAACG+AGG | - | Chr5:4593288-4593307 | None:intergenic | 35.0% | |
AATGATTGTGCTACAAGATC+AGG | - | Chr5:4593097-4593116 | None:intergenic | 35.0% | |
ACAAGAGTTGGAAATGAACT+TGG | + | Chr5:4593565-4593584 | MsG0580024415.01.T01:CDS | 35.0% | |
ACACCAAAACTCAAAGAAGA+AGG | - | Chr5:4593541-4593560 | None:intergenic | 35.0% | |
AGAAAAGGCGAAAAACAAAG+CGG | - | Chr5:4593662-4593681 | None:intergenic | 35.0% | |
AGCTCACATAGTCCTATAAT+CGG | - | Chr5:4593754-4593773 | None:intergenic | 35.0% | |
ATTATAGGACTATGTGAGCT+TGG | + | Chr5:4593754-4593773 | MsG0580024415.01.T01:CDS | 35.0% | |
ATTTCCTCTGCTTGTTTCAA+AGG | + | Chr5:4593349-4593368 | MsG0580024415.01.T01:CDS | 35.0% | |
CTTCGAAGATAGATTCTCAA+AGG | - | Chr5:4593127-4593146 | None:intergenic | 35.0% | |
GATTTCAAAGGTTTGTGGTT+TGG | + | Chr5:4593913-4593932 | MsG0580024415.01.T01:CDS | 35.0% | |
GCTAAAAGATTCAAACTCCT+TGG | + | Chr5:4592923-4592942 | MsG0580024415.01.T01:CDS | 35.0% | |
GTTCTTCAATTGGGAATAAG+AGG | + | Chr5:4593229-4593248 | MsG0580024415.01.T01:CDS | 35.0% | |
GTTTGAATGTTGGGGATTTA+GGG | - | Chr5:4592652-4592671 | None:intergenic | 35.0% | |
TGTTTGAATGTTGGGGATTT+AGG | - | Chr5:4592653-4592672 | None:intergenic | 35.0% | |
TTCAAGTGAAGAAGAACAAG+AGG | + | Chr5:4594041-4594060 | MsG0580024415.01.T01:CDS | 35.0% | |
!! | AACTGTTTGTGGTGTTTTGA+GGG | + | Chr5:4593792-4593811 | MsG0580024415.01.T01:CDS | 35.0% |
!! | CGTTTGCTATATCTTCTTGT+TGG | - | Chr5:4593045-4593064 | None:intergenic | 35.0% |
!! | TCAATGGTGTTACCGATTAT+AGG | + | Chr5:4593739-4593758 | MsG0580024415.01.T01:CDS | 35.0% |
!! | TTTGGTGTTTCAACAAGAGT+TGG | + | Chr5:4593553-4593572 | MsG0580024415.01.T01:CDS | 35.0% |
!!! | CTGCAAGTTTTGCTTTTTGT+GGG | - | Chr5:4593600-4593619 | None:intergenic | 35.0% |
!!! | GCATTACCTATGGTTTTAAC+AGG | + | Chr5:4592731-4592750 | MsG0580024415.01.T01:CDS | 35.0% |
AAACTCAACCAAACTGCAAC+AGG | - | Chr5:4593880-4593899 | None:intergenic | 40.0% | |
AAATCAAGCAGAGAGAGCTA+AGG | + | Chr5:4594002-4594021 | MsG0580024415.01.T01:CDS | 40.0% | |
ACAAATAGGTTCCATTCCCA+TGG | - | Chr5:4592888-4592907 | None:intergenic | 40.0% | |
ACACACAAGAAAACATGGAG+TGG | + | Chr5:4593325-4593344 | MsG0580024415.01.T01:CDS | 40.0% | |
ACACCACAAACAGTTGTTTG+TGG | - | Chr5:4593787-4593806 | None:intergenic | 40.0% | |
ACATGCAACTGTTGCATCTA+TGG | + | Chr5:4593477-4593496 | MsG0580024415.01.T01:CDS | 40.0% | |
AGCAATTCCAAGCTGCATTT+CGG | + | Chr5:4593393-4593412 | MsG0580024415.01.T01:CDS | 40.0% | |
ATAGATGCAACAGTTGCATG+TGG | - | Chr5:4593478-4593497 | None:intergenic | 40.0% | |
ATGGGAATGGAACCTATTTG+TGG | + | Chr5:4592887-4592906 | MsG0580024415.01.T01:CDS | 40.0% | |
ATTGAGGGCGAGAGAAAAAT+GGG | - | Chr5:4592687-4592706 | None:intergenic | 40.0% | |
CATGCAACTGTTGCATCTAT+GGG | + | Chr5:4593478-4593497 | MsG0580024415.01.T01:CDS | 40.0% | |
CCAAAAGCTTGACCACAAAT+AGG | - | Chr5:4592902-4592921 | None:intergenic | 40.0% | |
CTGGAACACACAAGAAAACA+TGG | + | Chr5:4593320-4593339 | MsG0580024415.01.T01:CDS | 40.0% | |
GAGGTTGAAATTCGTCCAAA+CGG | - | Chr5:4593269-4593288 | None:intergenic | 40.0% | |
GCAAAACTTGCAGCAATAGT+TGG | + | Chr5:4593607-4593626 | MsG0580024415.01.T01:CDS | 40.0% | |
GGAATAAGAGGAATCGCTTT+AGG | + | Chr5:4593241-4593260 | MsG0580024415.01.T01:CDS | 40.0% | |
GTTTGGTTGAGTTTCTTTGC+TGG | + | Chr5:4593886-4593905 | MsG0580024415.01.T01:CDS | 40.0% | |
TGTCCACAAACAACTGTTTG+TGG | + | Chr5:4593781-4593800 | MsG0580024415.01.T01:CDS | 40.0% | |
TTCATACAAAGTGGAGACAG+AGG | - | Chr5:4592543-4592562 | None:intergenic | 40.0% | |
! | ATCAACGGTGTTAACATGTC+AGG | - | Chr5:4592629-4592648 | None:intergenic | 40.0% |
! | CAACTGTTTGTGGTGTTTTG+AGG | + | Chr5:4593791-4593810 | MsG0580024415.01.T01:CDS | 40.0% |
! | CCTATTTGTGGTCAAGCTTT+TGG | + | Chr5:4592899-4592918 | MsG0580024415.01.T01:CDS | 40.0% |
!! | ACTGTTTGTGGTGTTTTGAG+GGG | + | Chr5:4593793-4593812 | MsG0580024415.01.T01:CDS | 40.0% |
!! | AGGTTTGTGGTTTGGTCTTA+TGG | + | Chr5:4593921-4593940 | MsG0580024415.01.T01:CDS | 40.0% |
!!! | CTGTGTTTTGATTGTGGTTG+TGG | - | Chr5:4592594-4592613 | None:intergenic | 40.0% |
!!! | GCTGCAAGTTTTGCTTTTTG+TGG | - | Chr5:4593601-4593620 | None:intergenic | 40.0% |
ACAGGTTACTCCATTCTCTC+TGG | + | Chr5:4592857-4592876 | MsG0580024415.01.T01:CDS | 45.0% | |
AGACAAACCGAAATGCAGCT+TGG | - | Chr5:4593403-4593422 | None:intergenic | 45.0% | |
ATGTTGTTCCTTGGTCGTGT+TGG | + | Chr5:4592785-4592804 | MsG0580024415.01.T01:CDS | 45.0% | |
CATTGAGGGCGAGAGAAAAA+TGG | - | Chr5:4592688-4592707 | None:intergenic | 45.0% | |
CCTCTGCTTGTTTCAAAGGA+TGG | + | Chr5:4593353-4593372 | MsG0580024415.01.T01:CDS | 45.0% | |
GTTGGGGATTTAGGGATCAA+CGG | - | Chr5:4592644-4592663 | None:intergenic | 45.0% | |
! | GAATCGCTTTAGGTTCCGTT+TGG | + | Chr5:4593251-4593270 | MsG0580024415.01.T01:CDS | 45.0% |
! | GCATTTCGGTTTGTCTCGAA+TGG | + | Chr5:4593407-4593426 | MsG0580024415.01.T01:CDS | 45.0% |
! | TTTCGGTTTGTCTCGAATGG+TGG | + | Chr5:4593410-4593429 | MsG0580024415.01.T01:CDS | 45.0% |
!! | ATTCTCTCTGGTCTTGCCAT+GGG | + | Chr5:4592869-4592888 | MsG0580024415.01.T01:CDS | 45.0% |
!! | CCATCCTTTGAAACAAGCAG+AGG | - | Chr5:4593356-4593375 | None:intergenic | 45.0% |
!! | TTTGGTCTTATGGCTGCTCA+AGG | + | Chr5:4593931-4593950 | MsG0580024415.01.T01:CDS | 45.0% |
!!! | TTGTGGTGTTTTGAGGGGAA+CGG | + | Chr5:4593798-4593817 | MsG0580024415.01.T01:CDS | 45.0% |
CATGGCAAGACCAGAGAGAA+TGG | - | Chr5:4592870-4592889 | None:intergenic | 50.0% | |
GGCTGCTCAAGGTTCATGTA+TGG | + | Chr5:4593942-4593961 | MsG0580024415.01.T01:CDS | 50.0% | |
TGGGAATGCCTGTTGCAGTT+TGG | + | Chr5:4593869-4593888 | MsG0580024415.01.T01:CDS | 50.0% | |
! | GTGAGCTTGCTTTAGCAGGT+GGG | + | Chr5:4592807-4592826 | MsG0580024415.01.T01:CDS | 50.0% |
! | GTTGGTGAGCTTGCTTTAGC+AGG | + | Chr5:4592803-4592822 | MsG0580024415.01.T01:CDS | 50.0% |
!! | CATTCTCTCTGGTCTTGCCA+TGG | + | Chr5:4592868-4592887 | MsG0580024415.01.T01:CDS | 50.0% |
CAAGCTCACCAACACGACCA+AGG | - | Chr5:4592796-4592815 | None:intergenic | 55.0% | |
CGGTTTGTCTCGAATGGTGG+TGG | + | Chr5:4593413-4593432 | MsG0580024415.01.T01:CDS | 55.0% | |
! | GGTGAGCTTGCTTTAGCAGG+TGG | + | Chr5:4592806-4592825 | MsG0580024415.01.T01:CDS | 55.0% |
!! | CTCTGGTCTTGCCATGGGAA+TGG | + | Chr5:4592874-4592893 | MsG0580024415.01.T01:CDS | 55.0% |
GCAGGTGGGTCACTTGCCAT+TGG | + | Chr5:4592821-4592840 | MsG0580024415.01.T01:CDS | 60.0% | |
GGAACGGCGAGGCCGAAATT+AGG | + | Chr5:4593814-4593833 | MsG0580024415.01.T01:CDS | 60.0% | |
!!! | GTGTTTTGAGGGGAACGGCG+AGG | + | Chr5:4593803-4593822 | MsG0580024415.01.T01:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr5 | gene | 4592515 | 4594128 | 4592515 | ID=MsG0580024415.01;Name=MsG0580024415.01 |
Chr5 | mRNA | 4592515 | 4594128 | 4592515 | ID=MsG0580024415.01.T01;Parent=MsG0580024415.01;Name=MsG0580024415.01.T01;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|537 |
Chr5 | exon | 4592515 | 4594128 | 4592515 | ID=MsG0580024415.01.T01:exon:2296;Parent=MsG0580024415.01.T01 |
Chr5 | CDS | 4592515 | 4594128 | 4592515 | ID=MsG0580024415.01.T01:cds;Parent=MsG0580024415.01.T01 |
Gene Sequence |
Protein sequence |