AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580024749.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024749.01.T01 MTR_5g015790 76.809 539 17 4 1 431 1 539 0.0 801
MsG0580024749.01.T01 MTR_1g106430 52.294 545 139 10 1 430 1 539 1.95e-174 502
MsG0580024749.01.T01 MTR_1g014070 51.708 439 135 6 1 362 1 439 8.17e-137 406
MsG0580024749.01.T01 MTR_5g032780 37.454 542 189 11 1 397 1 537 6.92e-102 317
MsG0580024749.01.T01 MTR_8g069330 39.469 527 199 12 1 412 1 522 2.56e-95 298
MsG0580024749.01.T01 MTR_4g134210 39.080 435 193 9 1 367 1 431 1.76e-92 291
MsG0580024749.01.T01 MTR_2g027410 35.681 426 210 9 1 367 1 421 4.56e-77 250
MsG0580024749.01.T01 MTR_4g093850 32.484 471 204 7 5 362 23 492 4.95e-75 247
MsG0580024749.01.T01 MTR_2g048390 36.344 454 193 9 1 360 1 452 1.53e-74 240
MsG0580024749.01.T01 MTR_2g018750 30.797 552 246 14 1 427 1 541 1.41e-62 213
MsG0580024749.01.T01 MTR_2g084595 33.806 423 191 7 27 360 23 445 1.97e-61 206
MsG0580024749.01.T01 MTR_2g084595 33.882 425 192 7 27 362 23 447 3.12e-61 210
MsG0580024749.01.T01 MTR_8g090220 30.698 430 215 10 11 362 38 462 4.74e-61 207
MsG0580024749.01.T01 MTR_8g090220 30.698 430 215 10 11 362 38 462 2.09e-60 207
MsG0580024749.01.T01 MTR_2g027410 35.694 353 165 7 73 367 1 349 6.06e-60 203
MsG0580024749.01.T01 MTR_1g064360 32.106 489 222 13 1 382 1 486 3.55e-59 203
MsG0580024749.01.T01 MTR_4g022330 32.388 423 206 9 19 362 21 442 3.76e-58 201
MsG0580024749.01.T01 MTR_1g094850 32.962 449 210 12 1 362 1 445 1.52e-57 199
MsG0580024749.01.T01 MTR_4g095430 32.039 412 202 7 24 362 10 416 6.74e-57 197
MsG0580024749.01.T01 MTR_5g016060 31.504 419 213 7 24 368 37 455 7.03e-55 192
MsG0580024749.01.T01 MTR_1g082690 34.133 375 206 9 28 362 59 432 1.39e-54 190
MsG0580024749.01.T01 MTR_4g093850 46.354 192 101 2 5 195 23 213 1.35e-53 187
MsG0580024749.01.T01 MTR_2g009340 49.162 179 89 2 5 182 23 200 5.24e-51 183
MsG0580024749.01.T01 MTR_2g009340 34.706 170 76 2 228 362 330 499 2.60e-23 103
MsG0580024749.01.T01 MTR_1g088885 30.340 412 213 7 25 362 34 445 3.39e-50 180
MsG0580024749.01.T01 MTR_3g062540 31.714 391 215 7 24 362 21 411 1.07e-49 177
MsG0580024749.01.T01 MTR_8g078900 30.735 449 201 11 22 360 15 463 3.25e-47 169
MsG0580024749.01.T01 MTR_8g078900 30.820 451 202 11 22 362 15 465 4.33e-47 172
MsG0580024749.01.T01 MTR_7g073980 31.068 412 212 11 23 362 29 440 3.15e-45 166
MsG0580024749.01.T01 MTR_5g075640 31.078 399 212 9 26 362 24 421 6.33e-44 162
MsG0580024749.01.T01 MTR_7g108290 29.384 422 208 9 25 362 34 449 1.04e-43 162
MsG0580024749.01.T01 MTR_8g078900 29.885 435 195 11 38 362 1 435 1.83e-41 155
MsG0580024749.01.T01 MTR_3g062540 30.978 368 202 7 47 362 2 369 3.46e-41 153
MsG0580024749.01.T01 MTR_5g075640 30.423 378 200 9 47 362 2 378 6.98e-36 139
MsG0580024749.01.T01 MTR_8g078900 30.526 380 175 10 72 362 46 425 2.25e-35 138
MsG0580024749.01.T01 MTR_8g078900 30.105 382 178 10 68 360 42 423 2.68e-35 135
MsG0580024749.01.T01 MTR_5g016060 28.375 363 186 7 103 391 3 365 1.92e-31 126
MsG0580024749.01.T01 MTR_2g102730 34.021 194 98 4 199 362 51 244 1.12e-22 100
MsG0580024749.01.T01 MTR_4g011530 35.417 192 96 5 199 362 73 264 1.26e-22 100
MsG0580024749.01.T01 MTR_4g045767 24.409 381 233 10 36 362 14 393 2.46e-20 94.0
MsG0580024749.01.T01 MTR_1g105870 34.586 133 84 1 31 160 35 167 1.11e-19 88.6
MsG0580024749.01.T01 MTR_2g010890 25.309 324 184 8 94 362 3 323 1.44e-12 69.7
MsG0580024749.01.T01 MTR_1g035720 33.607 122 74 5 30 148 6 123 1.83e-12 69.3
MsG0580024749.01.T01 MTR_1g035720 30.935 139 82 2 238 362 272 410 1.17e-11 67.0
MsG0580024749.01.T01 MTR_4g074190 28.415 183 107 4 238 400 276 454 2.74e-12 68.9
MsG0580024749.01.T01 MTR_4g074190 28.313 166 99 2 238 386 230 392 2.74e-12 68.9
MsG0580024749.01.T01 MTR_4g074190 28.571 140 83 1 238 360 276 415 2.31e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024749.01.T01 AT2G14820 49.632 544 157 9 1 430 1 541 4.49e-166 481
MsG0580024749.01.T01 AT2G14820 49.632 544 157 9 1 430 1 541 4.49e-166 481
MsG0580024749.01.T01 AT5G67440 51.644 517 131 13 1 416 1 499 3.75e-161 467
MsG0580024749.01.T01 AT5G67440 51.644 517 131 13 1 416 1 499 3.75e-161 467
MsG0580024749.01.T01 AT4G37590 48.399 531 152 15 1 431 1 509 2.26e-149 437
MsG0580024749.01.T01 AT2G23050 49.241 461 149 8 1 381 1 456 2.86e-133 392
MsG0580024749.01.T01 AT5G67440 48.529 476 126 13 42 416 5 462 1.23e-132 393
MsG0580024749.01.T01 AT4G31820 45.921 429 165 7 1 367 1 424 3.52e-115 349
MsG0580024749.01.T01 AT1G67900 36.749 566 203 15 1 417 1 560 5.71e-94 296
MsG0580024749.01.T01 AT1G67900 36.749 566 203 15 1 417 1 560 5.71e-94 296
MsG0580024749.01.T01 AT1G67900 36.749 566 203 15 1 417 1 560 5.71e-94 296
MsG0580024749.01.T01 AT1G67900 36.749 566 203 15 1 417 1 560 5.71e-94 296
MsG0580024749.01.T01 AT1G67900 36.749 566 203 15 1 417 1 560 5.71e-94 296
MsG0580024749.01.T01 AT1G67900 36.749 566 203 15 1 417 1 560 5.71e-94 296
MsG0580024749.01.T01 AT4G31820 43.351 376 146 7 54 367 1 371 9.84e-87 274
MsG0580024749.01.T01 AT5G47800 35.011 437 209 9 1 367 1 432 1.69e-80 259
MsG0580024749.01.T01 AT5G47800 35.011 437 209 9 1 367 1 432 1.69e-80 259
MsG0580024749.01.T01 AT5G47800 35.011 437 209 9 1 367 1 432 1.69e-80 259
MsG0580024749.01.T01 AT5G47800 35.011 437 209 9 1 367 114 545 2.88e-79 258
MsG0580024749.01.T01 AT2G23050 43.478 345 116 7 111 381 1 340 5.40e-75 239
MsG0580024749.01.T01 AT5G03250 34.505 455 203 11 1 362 1 453 4.69e-70 232
MsG0580024749.01.T01 AT1G30440 31.238 541 225 11 1 401 1 534 6.98e-68 228
MsG0580024749.01.T01 AT3G26490 38.710 341 151 9 1 290 1 334 9.75e-67 221
MsG0580024749.01.T01 AT3G26490 38.710 341 151 9 1 290 1 334 2.11e-66 223
MsG0580024749.01.T01 AT3G26490 38.710 341 151 9 1 290 1 334 2.11e-66 223
MsG0580024749.01.T01 AT3G26490 38.710 341 151 9 1 290 1 334 2.11e-66 223
MsG0580024749.01.T01 AT5G10250 32.346 405 220 6 11 362 35 438 7.44e-61 208
MsG0580024749.01.T01 AT5G67385 33.990 406 199 9 24 362 22 425 4.39e-59 203
MsG0580024749.01.T01 AT5G13600 33.111 450 207 8 1 362 1 444 4.47e-59 203
MsG0580024749.01.T01 AT5G10250 31.354 421 218 7 11 362 35 453 5.17e-59 204
MsG0580024749.01.T01 AT2G47860 31.084 415 209 6 21 360 31 443 9.57e-56 191
MsG0580024749.01.T01 AT2G47860 31.477 413 206 6 25 362 35 445 3.26e-55 194
MsG0580024749.01.T01 AT3G08660 33.085 402 189 8 23 360 30 415 6.33e-55 188
MsG0580024749.01.T01 AT3G08660 33.170 407 186 8 23 362 30 417 7.63e-55 192
MsG0580024749.01.T01 AT5G48800 32.518 409 199 8 22 362 36 435 9.82e-55 192
MsG0580024749.01.T01 AT5G64330 45.918 196 102 3 7 199 33 227 2.24e-52 186
MsG0580024749.01.T01 AT5G64330 57.143 56 24 0 307 362 501 556 7.39e-12 67.8
MsG0580024749.01.T01 AT5G64330 45.918 196 102 3 7 199 33 227 4.84e-52 186
MsG0580024749.01.T01 AT5G64330 57.143 56 24 0 307 362 501 556 5.11e-12 68.6
MsG0580024749.01.T01 AT3G44820 30.217 460 212 10 8 362 5 460 1.71e-51 184
MsG0580024749.01.T01 AT3G49970 34.722 360 192 9 40 362 7 360 1.71e-51 181
MsG0580024749.01.T01 AT3G49970 34.722 360 192 9 40 362 7 360 1.71e-51 181
MsG0580024749.01.T01 AT1G03010 31.678 423 202 8 25 362 7 427 1.02e-50 181
MsG0580024749.01.T01 AT1G03010 31.616 427 205 8 21 362 29 453 1.07e-50 181
MsG0580024749.01.T01 AT2G47860 29.452 438 209 7 21 360 31 466 1.26e-50 178
MsG0580024749.01.T01 AT1G03010 31.678 423 202 8 25 362 34 454 1.52e-50 181
MsG0580024749.01.T01 AT2G30520 32.915 398 204 8 24 362 27 420 1.73e-50 180
MsG0580024749.01.T01 AT2G47860 29.817 436 206 7 25 362 35 468 2.28e-50 181
MsG0580024749.01.T01 AT5G66560 30.983 468 192 12 22 360 14 479 1.40e-49 175
MsG0580024749.01.T01 AT5G66560 30.704 469 196 11 22 362 14 481 1.75e-49 179
MsG0580024749.01.T01 AT5G67385 32.723 382 188 9 48 362 1 380 4.00e-48 173
MsG0580024749.01.T01 AT5G67385 32.723 382 188 9 48 362 1 380 4.00e-48 173
MsG0580024749.01.T01 AT5G67385 32.723 382 188 9 48 362 1 380 4.00e-48 173
MsG0580024749.01.T01 AT5G67385 32.723 382 188 9 48 362 1 380 4.00e-48 173
MsG0580024749.01.T01 AT3G50840 32.921 404 204 10 22 362 11 410 2.46e-47 171
MsG0580024749.01.T01 AT3G08570 30.935 417 206 10 23 362 30 441 7.17e-47 171
MsG0580024749.01.T01 AT3G08660 32.527 372 173 8 54 362 1 357 2.09e-45 165
MsG0580024749.01.T01 AT5G66560 30.377 451 185 11 40 362 3 452 6.17e-45 166
MsG0580024749.01.T01 AT2G30520 32.267 375 191 8 47 362 2 372 1.40e-42 157
MsG0580024749.01.T01 AT2G30520 32.267 375 191 8 47 362 2 372 1.40e-42 157
MsG0580024749.01.T01 AT5G66560 32.275 378 172 9 68 362 66 442 1.29e-41 156
MsG0580024749.01.T01 AT5G64330 45.882 170 82 4 37 199 2 168 1.42e-41 155
MsG0580024749.01.T01 AT5G64330 57.143 56 24 0 307 362 442 497 7.09e-12 67.8
MsG0580024749.01.T01 AT3G50840 31.481 378 192 10 48 362 1 374 1.80e-36 140
MsG0580024749.01.T01 AT3G50840 31.481 378 192 10 48 362 1 374 1.80e-36 140
MsG0580024749.01.T01 AT5G03250 27.251 422 174 11 111 406 1 415 3.05e-31 125
MsG0580024749.01.T01 AT2G47860 27.829 327 161 5 111 362 1 327 3.10e-26 111
MsG0580024749.01.T01 AT2G47860 27.829 327 161 5 111 362 1 327 3.10e-26 111
MsG0580024749.01.T01 AT5G48130 37.179 156 90 3 25 176 37 188 7.39e-25 107
MsG0580024749.01.T01 AT5G17580 25.598 418 248 6 14 369 7 423 2.55e-23 102
MsG0580024749.01.T01 AT5G17580 25.990 404 236 6 28 369 6 408 3.50e-22 99.4
MsG0580024749.01.T01 AT3G22104 25.450 389 229 12 28 362 5 386 5.45e-22 98.6
MsG0580024749.01.T01 AT1G52770 35.897 156 81 3 226 362 99 254 6.01e-21 95.1
MsG0580024749.01.T01 AT3G15570 33.537 164 90 2 223 367 101 264 1.39e-19 91.3
MsG0580024749.01.T01 AT1G50280 22.199 473 279 12 29 414 5 475 8.21e-19 89.4
MsG0580024749.01.T01 AT1G50280 22.717 427 248 10 68 414 18 442 1.33e-18 88.2
MsG0580024749.01.T01 AT3G03510 26.781 351 221 12 76 394 4 350 1.60e-17 84.7
MsG0580024749.01.T01 AT3G22104 32.143 168 99 3 210 362 144 311 1.92e-14 75.5
MsG0580024749.01.T01 AT3G22104 32.143 168 99 3 210 362 144 311 1.92e-14 75.5
MsG0580024749.01.T01 AT3G22104 32.143 168 99 3 210 362 144 311 1.92e-14 75.5
MsG0580024749.01.T01 AT3G19850 27.451 102 74 0 68 169 52 153 2.57e-11 65.9

Find 157 sgRNAs with CRISPR-Local

Find 305 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGATATTGTTTCAGGTTTA+TGG 0.106681 5:-9187122 None:intergenic
TGCCATTGACATGTATTTAA+AGG 0.151112 5:+9191106 MsG0580024749.01.T01:CDS
CCACTTTCTCTCTCAACTTA+TGG 0.174156 5:-9186866 None:intergenic
GGTGATTTGAAAAGCTATTT+TGG 0.174997 5:+9188114 MsG0580024749.01.T01:five_prime_UTR
CACAAAGAATAGATTATTAT+TGG 0.178237 5:+9190633 MsG0580024749.01.T01:CDS
GAAAACACAGATATTGTTTC+AGG 0.209047 5:-9187129 None:intergenic
CGGTTTATTGCCGGTAGATA+TGG 0.212856 5:+9190666 MsG0580024749.01.T01:CDS
TTTATCTTGGCCGGTCTCTT+TGG 0.239494 5:+9187848 MsG0580024749.01.T01:five_prime_UTR
CACAAACTCTTAACCAAGTT+TGG 0.239988 5:-9188086 None:intergenic
GAACATGTTGCTTACTAAAA+TGG 0.270449 5:-9187880 None:intergenic
AAAATTATGTTTCTGAATCT+TGG 0.287780 5:-9187671 None:intergenic
AAGTGGGAACATTCTGAAAT+TGG 0.292864 5:+9186883 MsG0580024749.01.T01:five_prime_UTR
AGATCAAAGTAGAAGATAAA+AGG 0.321417 5:-9188031 None:intergenic
AAAGAAACACAAACGTTTGT+TGG 0.323977 5:-9187091 None:intergenic
TGAATGTTGAGTATGGAATT+TGG 0.329924 5:+9187553 MsG0580024749.01.T01:five_prime_UTR
CTGATCTTCCCGGTTCCATC+AGG 0.334384 5:+9191425 MsG0580024749.01.T01:CDS
CAAAAGATGAGGCTTGAAAA+AGG 0.364405 5:-9186970 None:intergenic
AAAATGATGGAGATAATGTT+AGG 0.372524 5:+9188199 MsG0580024749.01.T01:CDS
GAAAGGGAAAAGGAAAAGTT+AGG 0.375628 5:+9186802 MsG0580024749.01.T01:five_prime_UTR
GACTATTGTCGGTTTATTGC+CGG 0.376124 5:+9190657 MsG0580024749.01.T01:CDS
CGAAGTATTGATACCATCTT+GGG 0.377920 5:-9190943 None:intergenic
CGACCATGGAAGAAGTGATT+TGG 0.379163 5:-9190270 None:intergenic
CAAACTTGGTTAAGAGTTTG+TGG 0.383904 5:+9188087 MsG0580024749.01.T01:five_prime_UTR
ATGCAATGCCCTGATGGAAC+CGG 0.384464 5:-9191434 None:intergenic
ATTCACATCCACGACATTCC+TGG 0.387097 5:+9190035 MsG0580024749.01.T01:CDS
ATTGAAAGTGGCTATTCAAC+TGG 0.388498 5:+9190720 MsG0580024749.01.T01:CDS
AAGGTTGCCTGGTTTCAATA+AGG 0.390063 5:+9190588 MsG0580024749.01.T01:CDS
CGGCCAAGATAAACCATGTT+AGG 0.398977 5:-9187838 None:intergenic
GCACATATTTCAAAAGCAAC+AGG 0.406384 5:-9190062 None:intergenic
ATCTAACTAGCCTTGGTTTG+TGG 0.408714 5:+9187969 MsG0580024749.01.T01:five_prime_UTR
TCTAACTAGCCTTGGTTTGT+GGG 0.409928 5:+9187970 MsG0580024749.01.T01:five_prime_UTR
TGGTTAAGAGTTTGTGGAGT+AGG 0.420229 5:+9188093 MsG0580024749.01.T01:five_prime_UTR
AGGTTGCCTGGTTTCAATAA+GGG 0.420841 5:+9190589 MsG0580024749.01.T01:CDS
TCTCCTAACATGGTTTATCT+TGG 0.424055 5:+9187835 MsG0580024749.01.T01:five_prime_UTR
CTGACATAGTCGTTAATGTT+GGG 0.428946 5:+9189751 MsG0580024749.01.T01:CDS
TAGTGTGTGAATGTTGAGTA+TGG 0.431493 5:+9187546 MsG0580024749.01.T01:five_prime_UTR
ACGAGCACTCCTGATCTTCC+CGG 0.435726 5:+9191415 MsG0580024749.01.T01:CDS
CTCGCTGAAGTTATTGAAAG+TGG 0.436588 5:+9190708 MsG0580024749.01.T01:CDS
CAATACTTCGAGCAAGATAA+AGG 0.437574 5:+9190956 MsG0580024749.01.T01:CDS
CATATATTTGTTCAGGTATG+TGG 0.437799 5:+9189713 MsG0580024749.01.T01:intron
AAACTGAGAAGAGGCAGATT+AGG 0.438663 5:-9191023 None:intergenic
TCGAAGTATTGATACCATCT+TGG 0.439224 5:-9190944 None:intergenic
GGTTTATTGCCGGTAGATAT+GGG 0.439454 5:+9190667 MsG0580024749.01.T01:CDS
CTGATGGAACCGGGAAGATC+AGG 0.442940 5:-9191424 None:intergenic
CTTGGTTTGTGGGAAAGATT+CGG 0.444335 5:+9187980 MsG0580024749.01.T01:five_prime_UTR
AAGATGAAGTTTATGAAACT+TGG 0.446570 5:+9188156 MsG0580024749.01.T01:exon
CCATAAGTTGAGAGAGAAAG+TGG 0.447068 5:+9186866 MsG0580024749.01.T01:five_prime_UTR
GTGGTTCTCACGGTAGTTCA+AGG 0.447533 5:+9191461 MsG0580024749.01.T01:CDS
AAATTTCATCTAACTAGCCT+TGG 0.450635 5:+9187962 MsG0580024749.01.T01:five_prime_UTR
AAAAGCTCCCATCGGAAAAT+GGG 0.457088 5:+9190390 MsG0580024749.01.T01:CDS
TTATTATTGGAGACTATTGT+CGG 0.461332 5:+9190646 MsG0580024749.01.T01:CDS
AGTGGTCATACACATATAAC+AGG 0.463792 5:+9190366 MsG0580024749.01.T01:CDS
GATGTACGAGACCATTGAAA+AGG 0.472920 5:+9190163 MsG0580024749.01.T01:CDS
ATCCCATTCCTCTTCTGTGT+TGG 0.473339 5:-9191494 None:intergenic
GTTGGTAATGTCTCCTAACA+TGG 0.479028 5:+9187825 MsG0580024749.01.T01:five_prime_UTR
GCCTATCCTCCGCATCAGTT+CGG 0.483793 5:-9190764 None:intergenic
CTAACATGGTTTATCTTGGC+CGG 0.484256 5:+9187839 MsG0580024749.01.T01:five_prime_UTR
CCGTAGCCTCCTCAAGCCTC+TGG 0.484339 5:-9190786 None:intergenic
TTCCTCTTCTGTGTTGGTCG+TGG 0.488018 5:-9191488 None:intergenic
GTGGTGTCTAAATCCATTGT+TGG 0.491175 5:+9187628 MsG0580024749.01.T01:five_prime_UTR
ATGAATGTGTTTGTGTGTGT+TGG 0.492957 5:+9187788 MsG0580024749.01.T01:five_prime_UTR
ATGTACGAGACCATTGAAAA+GGG 0.494912 5:+9190164 MsG0580024749.01.T01:CDS
AACCTTTAAATACATGTCAA+TGG 0.499724 5:-9191108 None:intergenic
GAGAAACAAAGAAAGGGAAA+AGG 0.500089 5:+9186792 MsG0580024749.01.T01:five_prime_UTR
CATAGCTACCAAGGCTTCGA+TGG 0.501566 5:+9190328 MsG0580024749.01.T01:CDS
GGGAACATTCTGAAATTGGT+TGG 0.502141 5:+9186887 MsG0580024749.01.T01:five_prime_UTR
GCTTCAACAACATCATCATC+AGG 0.503463 5:+9191388 MsG0580024749.01.T01:CDS
ATATGTGCAAAGTTCTGTTA+TGG 0.503531 5:+9190077 MsG0580024749.01.T01:CDS
GACCAACACAGAAGAGGAAT+GGG 0.506254 5:+9191492 MsG0580024749.01.T01:CDS
TGAACTACCGTGAGAACCAC+CGG 0.506443 5:-9191458 None:intergenic
ACCGGGATGCAATGCCCTGA+TGG 0.507424 5:-9191440 None:intergenic
TCCTGAAAATGCTGGAGTTG+AGG 0.508475 5:-9190214 None:intergenic
TATGACCACTCCACCTTGGA+TGG 0.511110 5:-9190353 None:intergenic
TCAAAAGCAACAGGTCCTCC+AGG 0.511400 5:-9190053 None:intergenic
CATCGAAGCCTTGGTAGCTA+TGG 0.511487 5:-9190327 None:intergenic
TTTAATAGAGAGTGGGGCGG+TGG 0.512625 5:+9187691 MsG0580024749.01.T01:five_prime_UTR
CGACCAACACAGAAGAGGAA+TGG 0.512670 5:+9191491 MsG0580024749.01.T01:CDS
CAGGTATGTGGCAACTGAGC+TGG 0.513876 5:+9189725 MsG0580024749.01.T01:intron
GGTTAATGAGAAACAAAGAA+AGG 0.515408 5:+9186785 None:intergenic
AAAGGGAAAAGGAAAAGTTA+GGG 0.515501 5:+9186803 MsG0580024749.01.T01:five_prime_UTR
TTTCCAGCTCCTGAAAATGC+TGG 0.516969 5:-9190222 None:intergenic
CAACCAAATCACTTCTTCCA+TGG 0.518084 5:+9190267 MsG0580024749.01.T01:CDS
GGATGGATCCATCGAAGCCT+TGG 0.518873 5:-9190336 None:intergenic
GTTAATGAGAAACAAAGAAA+GGG 0.524317 5:+9186786 None:intergenic
TCCATCAGGGCATTGCATCC+CGG 0.525817 5:+9191439 MsG0580024749.01.T01:CDS
TACACCTCTAGAAGGTTGCC+TGG 0.530328 5:+9190577 MsG0580024749.01.T01:CDS
ATCTTAAGTTCCTCCGACCA+TGG 0.530439 5:-9190284 None:intergenic
TGCAATGCCCTGATGGAACC+GGG 0.532513 5:-9191433 None:intergenic
AGGAAAGCTTGATACCAAAT+CGG 0.533858 5:-9191057 None:intergenic
AAGACGTAAAAGTTCTGAAA+GGG 0.539502 5:+9191533 MsG0580024749.01.T01:CDS
CCAGAGGCTTGAGGAGGCTA+CGG 0.540725 5:+9190786 MsG0580024749.01.T01:CDS
TTGCCGGTAGATATGGGAAG+TGG 0.543251 5:+9190673 MsG0580024749.01.T01:CDS
TTGCATCCCGGTGGTTCTCA+CGG 0.551268 5:+9191451 MsG0580024749.01.T01:CDS
GAAGACGTAAAAGTTCTGAA+AGG 0.557949 5:+9191532 MsG0580024749.01.T01:CDS
TCCGAACTGATGCGGAGGAT+AGG 0.560564 5:+9190763 MsG0580024749.01.T01:CDS
GGGAAAGATTCGGTCATACA+AGG 0.565114 5:+9187990 MsG0580024749.01.T01:five_prime_UTR
TGCAAAGTTCTGTTATGGTA+TGG 0.567366 5:+9190082 MsG0580024749.01.T01:CDS
TCTTTGTGATATCACCACTC+TGG 0.567643 5:-9190618 None:intergenic
AGTTGCAGCTCGCTGTGCAG+CGG 0.570192 5:+9190130 MsG0580024749.01.T01:CDS
TAAGTGCGTACACCTCTAGA+AGG 0.571808 5:+9190569 MsG0580024749.01.T01:CDS
AGACCGTCATGAGACTGTCT+AGG 0.573268 5:-9191077 None:intergenic
GTGGTGTCAGATAGAACTAG+TGG 0.574514 5:+9187710 MsG0580024749.01.T01:five_prime_UTR
GTAACAAAGTCCAAAGAGAC+CGG 0.578877 5:-9187858 None:intergenic
GAGGATAGGCCAGAGGCTTG+AGG 0.582061 5:+9190777 MsG0580024749.01.T01:CDS
TGATCTTCCCGGTTCCATCA+GGG 0.583101 5:+9191426 MsG0580024749.01.T01:CDS
TTATGTTATGCAGGAACACA+TGG 0.584749 5:+9191223 MsG0580024749.01.T01:intron
CAAAGGAATGGCAAAAGATG+AGG 0.585917 5:-9186981 None:intergenic
ACATGAACCAATCAAAGGAA+TGG 0.586672 5:-9186993 None:intergenic
TCTGACATAGTCGTTAATGT+TGG 0.590158 5:+9189750 MsG0580024749.01.T01:CDS
TGTGTTTGTGTAGCTAGCTG+TGG 0.593299 5:+9186915 MsG0580024749.01.T01:five_prime_UTR
GTTTGTGTAGCTAGCTGTGG+TGG 0.597001 5:+9186918 MsG0580024749.01.T01:five_prime_UTR
AAAATGGGAACGAAGCACAC+TGG 0.598218 5:+9190405 MsG0580024749.01.T01:CDS
GTTAGTTTCAAACACAGATG+AGG 0.598340 5:+9190001 MsG0580024749.01.T01:CDS
CAAATCACTTCTTCCATGGT+CGG 0.598798 5:+9190271 MsG0580024749.01.T01:CDS
TGGTGTCAGATAGAACTAGT+GGG 0.601505 5:+9187711 MsG0580024749.01.T01:five_prime_UTR
GAGCCACTTCCCATATCTAC+CGG 0.602916 5:-9190676 None:intergenic
AGAAGAGGAATGGGATGCTG+TGG 0.608026 5:+9191501 MsG0580024749.01.T01:CDS
GGCTTCGATGGATCCATCCA+AGG 0.608155 5:+9190340 MsG0580024749.01.T01:CDS
GAGGCTTGAGGAGGCTACGG+TGG 0.609045 5:+9190789 MsG0580024749.01.T01:CDS
AAACTACATGAACCAATCAA+AGG 0.610942 5:-9186998 None:intergenic
CGAATCTTTCCCACAAACCA+AGG 0.613263 5:-9187979 None:intergenic
GGAGATCAGAAGCCCCAAGA+TGG 0.614219 5:+9190930 MsG0580024749.01.T01:intron
AGGAGTTCAAAGAAGGGACA+TGG 0.614723 5:+9187514 MsG0580024749.01.T01:intron
TGACATAGTCGTTAATGTTG+GGG 0.615279 5:+9189752 MsG0580024749.01.T01:CDS
CGGTGAGATCCGAACTGATG+CGG 0.621378 5:+9190755 MsG0580024749.01.T01:CDS
CAGGTCCTCCAGGAATGTCG+TGG 0.625588 5:-9190043 None:intergenic
TGGATCCATCCAAGGTGGAG+TGG 0.627703 5:+9190348 MsG0580024749.01.T01:CDS
TGTGTATGACCACTCCACCT+TGG 0.631504 5:-9190357 None:intergenic
TACCACGACCAACACAGAAG+AGG 0.634888 5:+9191486 MsG0580024749.01.T01:CDS
ATGTTCACAAAACTGAGAAG+AGG 0.639567 5:-9191032 None:intergenic
GGGAACGAAGCACACTGGAA+CGG 0.640951 5:+9190410 MsG0580024749.01.T01:CDS
AATAAGGGTGTTATCCAGAG+TGG 0.642711 5:+9190604 MsG0580024749.01.T01:CDS
TATCGAGTCCATAGCTACCA+AGG 0.646357 5:+9190319 MsG0580024749.01.T01:CDS
TAGCTATGGACTCGATACAA+TGG 0.647840 5:-9190313 None:intergenic
ATCACTTCTTCCATGGTCGG+AGG 0.648232 5:+9190274 MsG0580024749.01.T01:CDS
GGTGTCAGATAGAACTAGTG+GGG 0.648820 5:+9187712 MsG0580024749.01.T01:five_prime_UTR
GAAACCAGGCAACCTTCTAG+AGG 0.650655 5:-9190581 None:intergenic
GATATGGGAAGTGGCTCATG+CGG 0.650973 5:+9190682 MsG0580024749.01.T01:CDS
TCAACTGGATTGTGAAGTGT+CGG 0.651439 5:+9190735 MsG0580024749.01.T01:CDS
ACATAACATAAACATAAACA+AGG 0.655758 5:-9187024 None:intergenic
GAACTACCGTGAGAACCACC+GGG 0.662467 5:-9191457 None:intergenic
GATAGGCCAGAGGCTTGAGG+AGG 0.663205 5:+9190780 MsG0580024749.01.T01:CDS
ATCAGGGCATTGCATCCCGG+TGG 0.664334 5:+9191442 MsG0580024749.01.T01:CDS
TGAGATCCGAACTGATGCGG+AGG 0.666675 5:+9190758 MsG0580024749.01.T01:CDS
ATAACACCCTTATTGAAACC+AGG 0.668210 5:-9190595 None:intergenic
CATAAGTTGAGAGAGAAAGT+GGG 0.674517 5:+9186867 MsG0580024749.01.T01:five_prime_UTR
TTTCCTAGACAGTCTCATGA+CGG 0.681338 5:+9191074 MsG0580024749.01.T01:CDS
AAGGGAAAAGGAAAAGTTAG+GGG 0.686514 5:+9186804 MsG0580024749.01.T01:five_prime_UTR
GATCACGTGCAATCTCAGCA+AGG 0.693796 5:-9191001 None:intergenic
TGATGCGGAGGATAGGCCAG+AGG 0.699869 5:+9190770 MsG0580024749.01.T01:CDS
GTGGCTGTCATCAAAAGATG+AGG 0.704835 5:+9186937 MsG0580024749.01.T01:five_prime_UTR
TCAACAACATCATCATCAGG+AGG 0.705468 5:+9191391 MsG0580024749.01.T01:CDS
GAAGTATTGATACCATCTTG+GGG 0.713277 5:-9190942 None:intergenic
CACATCCACGACATTCCTGG+AGG 0.714031 5:+9190038 MsG0580024749.01.T01:CDS
GTGTCAGATAGAACTAGTGG+GGG 0.721905 5:+9187713 MsG0580024749.01.T01:five_prime_UTR
AGGGAAAAGGAAAAGTTAGG+GGG 0.722276 5:+9186805 MsG0580024749.01.T01:five_prime_UTR
TTCGATGGATCCATCCAAGG+TGG 0.725031 5:+9190343 MsG0580024749.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTACAAAATAAAGTTTAA+CGG + Chr5:9188645-9188664 MsG0580024749.01.T01:intron 10.0%
!! ACATATTAAATACAAAATTA+AGG - Chr5:9189579-9189598 None:intergenic 10.0%
!! TATTAAATACAAAATTAAGG+CGG - Chr5:9189576-9189595 None:intergenic 15.0%
!! TTGTATACAATAATTACAAA+AGG - Chr5:9189847-9189866 None:intergenic 15.0%
!!! AAAATTTAAAATAAGAGGAT+CGG - Chr5:9189238-9189257 None:intergenic 15.0%
!! AAACATGTTAAATACATGTA+TGG - Chr5:9191145-9191164 None:intergenic 20.0%
!! ACATAACATAAACATAAACA+AGG - Chr5:9187027-9187046 None:intergenic 20.0%
!! ATGAAACATAAAAATCAACA+TGG - Chr5:9187246-9187265 None:intergenic 20.0%
!! ATTAAATACAAAATTAAGGC+GGG - Chr5:9189575-9189594 None:intergenic 20.0%
!! CACAAAGAATAGATTATTAT+TGG + Chr5:9190633-9190652 MsG0580024749.01.T01:CDS 20.0%
!! TATCTATAGTGAAAAATTCT+TGG - Chr5:9189160-9189179 None:intergenic 20.0%
!! TCAAATAATCAAATCTAAAC+AGG + Chr5:9188769-9188788 MsG0580024749.01.T01:intron 20.0%
!! TGAAACATAAAAATCAACAT+GGG - Chr5:9187245-9187264 None:intergenic 20.0%
!! TTATACATAAGCACTTATAT+TGG - Chr5:9188610-9188629 None:intergenic 20.0%
!!! AAAATTATGTTTCTGAATCT+TGG - Chr5:9187674-9187693 None:intergenic 20.0%
!!! AACATAATTTTAATAGAGAG+TGG + Chr5:9187683-9187702 MsG0580024749.01.T01:five_prime_UTR 20.0%
!!! AAGCATTTTTTTTAATCCAA+TGG + Chr5:9187382-9187401 MsG0580024749.01.T01:intron 20.0%
!!! ACATAATTTTAATAGAGAGT+GGG + Chr5:9187684-9187703 MsG0580024749.01.T01:five_prime_UTR 20.0%
!!! ATTAAGTTGTTTATTGAAAC+AGG - Chr5:9188578-9188597 None:intergenic 20.0%
!!! ATTTCATTCACTGTTTTTTA+CGG + Chr5:9189356-9189375 MsG0580024749.01.T01:intron 20.0%
!!! CGTAAAATTTTATCTACATA+AGG + Chr5:9189776-9189795 MsG0580024749.01.T01:CDS 20.0%
!!! GTGTGAAAATTTAAAATAAG+AGG - Chr5:9189243-9189262 None:intergenic 20.0%
!!! TTAAGTTGTTTATTGAAACA+GGG - Chr5:9188577-9188596 None:intergenic 20.0%
!!! TTAGTATTATTTTGTCATGA+TGG + Chr5:9188367-9188386 MsG0580024749.01.T01:intron 20.0%
!!! TTTGAATCATATGTTATTTC+AGG + Chr5:9188244-9188263 MsG0580024749.01.T01:intron 20.0%
! AACCTTTAAATACATGTCAA+TGG - Chr5:9191111-9191130 None:intergenic 25.0%
! AAGAAGATATATCTGAACTA+TGG - Chr5:9188866-9188885 None:intergenic 25.0%
! AAGATGAAGTTTATGAAACT+TGG + Chr5:9188156-9188175 MsG0580024749.01.T01:exon 25.0%
! AGATCAAAGTAGAAGATAAA+AGG - Chr5:9188034-9188053 None:intergenic 25.0%
! ATAGTGAAAAATTCTTGGAA+AGG - Chr5:9189155-9189174 None:intergenic 25.0%
! ATGCTTTATGTCTACAAAAT+AGG + Chr5:9187448-9187467 MsG0580024749.01.T01:intron 25.0%
! ATTGTTCGTAAATATGCAAA+AGG - Chr5:9189468-9189487 None:intergenic 25.0%
! CATTCAAAATTAATGTGAAG+TGG + Chr5:9189690-9189709 MsG0580024749.01.T01:intron 25.0%
! GATAAATCTGAAAAGAAAGA+TGG - Chr5:9189117-9189136 None:intergenic 25.0%
! GGAAATAAGAAAACAACTTA+TGG + Chr5:9188718-9188737 MsG0580024749.01.T01:intron 25.0%
! TTATTATTGGAGACTATTGT+CGG + Chr5:9190646-9190665 MsG0580024749.01.T01:CDS 25.0%
!! AAAATGATGGAGATAATGTT+AGG + Chr5:9188199-9188218 MsG0580024749.01.T01:CDS 25.0%
!! AAACAATATCTGTGTTTTCT+AGG + Chr5:9187133-9187152 MsG0580024749.01.T01:five_prime_UTR 25.0%
!! ATTACAAAAGGTGTATTCTT+TGG - Chr5:9189835-9189854 None:intergenic 25.0%
!! GGAAAGGAAAATTATTTTCA+AGG - Chr5:9189139-9189158 None:intergenic 25.0%
!! TTTTCTGTTTTATCCAAACT+TGG + Chr5:9188073-9188092 MsG0580024749.01.T01:five_prime_UTR 25.0%
!!! AAACAAAAGACAGCATTTTT+TGG - Chr5:9187492-9187511 None:intergenic 25.0%
!!! CATAATTTTAATAGAGAGTG+GGG + Chr5:9187685-9187704 MsG0580024749.01.T01:five_prime_UTR 25.0%
!!! TTTTGGAGCTTTTTTCTTTT+TGG + Chr5:9188131-9188150 MsG0580024749.01.T01:five_prime_UTR 25.0%
AAACATAAGAAACCAACCAA+TGG - Chr5:9188309-9188328 None:intergenic 30.0%
AAACTACATGAACCAATCAA+AGG - Chr5:9187001-9187020 None:intergenic 30.0%
AAAGAAACACAAACGTTTGT+TGG - Chr5:9187094-9187113 None:intergenic 30.0%
AAAGGGAAAAGGAAAAGTTA+GGG + Chr5:9186803-9186822 MsG0580024749.01.T01:five_prime_UTR 30.0%
AACATATGATTCAAAGCAAG+AGG - Chr5:9188239-9188258 None:intergenic 30.0%
ACATAAGCACTTATATTGGA+AGG - Chr5:9188606-9188625 None:intergenic 30.0%
ATATATCTGAACTATGGAGA+TGG - Chr5:9188860-9188879 None:intergenic 30.0%
ATATGTGCAAAGTTCTGTTA+TGG + Chr5:9190077-9190096 MsG0580024749.01.T01:CDS 30.0%
ATGTGGTTTGATTATCCTTT+AGG + Chr5:9189904-9189923 MsG0580024749.01.T01:intron 30.0%
ATTACGTAATCCTCAATTTG+AGG - Chr5:9188796-9188815 None:intergenic 30.0%
CATATATTTGTTCAGGTATG+TGG + Chr5:9189713-9189732 MsG0580024749.01.T01:intron 30.0%
CATGTTAAATACATGTATGG+TGG - Chr5:9191142-9191161 None:intergenic 30.0%
CTTTATGTCTACAAAATAGG+TGG + Chr5:9187451-9187470 MsG0580024749.01.T01:intron 30.0%
GAAAACACAGATATTGTTTC+AGG - Chr5:9187132-9187151 None:intergenic 30.0%
GAGTATGAGAAAAAAGAAGA+GGG - Chr5:9187069-9187088 None:intergenic 30.0%
GTGAGATAGAAATGTATCAT+TGG - Chr5:9188896-9188915 None:intergenic 30.0%
TAGCATTATCATATATGCTG+AGG - Chr5:9188469-9188488 None:intergenic 30.0%
TAGTACATAACACACATTGA+TGG - Chr5:9189328-9189347 None:intergenic 30.0%
TATATCTGAACTATGGAGAT+GGG - Chr5:9188859-9188878 None:intergenic 30.0%
TATATGCTGAGGAACTAATT+AGG - Chr5:9188458-9188477 None:intergenic 30.0%
TATCCTTGACTGATAAAGAA+TGG - Chr5:9188831-9188850 None:intergenic 30.0%
TGAATGTTGAGTATGGAATT+TGG + Chr5:9187553-9187572 MsG0580024749.01.T01:five_prime_UTR 30.0%
TGAGTATGAGAAAAAAGAAG+AGG - Chr5:9187070-9187089 None:intergenic 30.0%
TGCCATTGACATGTATTTAA+AGG + Chr5:9191106-9191125 MsG0580024749.01.T01:CDS 30.0%
! AAATTTCATCTAACTAGCCT+TGG + Chr5:9187962-9187981 MsG0580024749.01.T01:five_prime_UTR 30.0%
! ACAAGCAATAGTATGTTTTC+TGG - Chr5:9189607-9189626 None:intergenic 30.0%
! CCTGATTCTTTTCAAAATGA+TGG + Chr5:9188186-9188205 MsG0580024749.01.T01:CDS 30.0%
! GAAAAGAATATGTAGGTTGA+TGG + Chr5:9191264-9191283 MsG0580024749.01.T01:intron 30.0%
! GAACATGTTGCTTACTAAAA+TGG - Chr5:9187883-9187902 None:intergenic 30.0%
! GGTGATTTGAAAAGCTATTT+TGG + Chr5:9188114-9188133 MsG0580024749.01.T01:five_prime_UTR 30.0%
! TCACAAGTTGGAATAATGAT+GGG - Chr5:9187291-9187310 None:intergenic 30.0%
! TGTTAACTTTTGCTTCTTTC+TGG - Chr5:9188970-9188989 None:intergenic 30.0%
! TTTAAATTTTCACACGACAG+TGG + Chr5:9189248-9189267 MsG0580024749.01.T01:intron 30.0%
!! AACACCAACTAGTTTGATTT+TGG - Chr5:9189384-9189403 None:intergenic 30.0%
!! AAGACGTAAAAGTTCTGAAA+GGG + Chr5:9191533-9191552 MsG0580024749.01.T01:CDS 30.0%
!! CAGATATTGTTTCAGGTTTA+TGG - Chr5:9187125-9187144 None:intergenic 30.0%
!! CCATCATTTTGAAAAGAATC+AGG - Chr5:9188189-9188208 None:intergenic 30.0%
!! TTTTGTTGTGTTTCCAACAA+TGG - Chr5:9187644-9187663 None:intergenic 30.0%
!!! AAATGCTGTCTTTTGTTTTC+AGG + Chr5:9187494-9187513 MsG0580024749.01.T01:intron 30.0%
!!! GTGTTTTGTTTGTTACTTTG+TGG + Chr5:9187609-9187628 MsG0580024749.01.T01:five_prime_UTR 30.0%
!!! TTGGAGATAGTTTGTTTTGT+TGG + Chr5:9187807-9187826 MsG0580024749.01.T01:five_prime_UTR 30.0%
AACTAATGGTTCCAAAGGAT+TGG + Chr5:9190444-9190463 MsG0580024749.01.T01:intron 35.0%
AAGAAAGATGGAACACTATG+TGG - Chr5:9189105-9189124 None:intergenic 35.0%
AAGGGAAAAGGAAAAGTTAG+GGG + Chr5:9186804-9186823 MsG0580024749.01.T01:five_prime_UTR 35.0%
ACAACCAATGGAAATGTTTC+CGG + Chr5:9190527-9190546 MsG0580024749.01.T01:intron 35.0%
ACATGAACCAATCAAAGGAA+TGG - Chr5:9186996-9187015 None:intergenic 35.0%
ACTTCAACCGAACTGAATTT+CGG + Chr5:9191188-9191207 MsG0580024749.01.T01:intron 35.0%
AGCAGATATTGATCAGGTAA+AGG - Chr5:9189942-9189961 None:intergenic 35.0%
AGGAAAGCTTGATACCAAAT+CGG - Chr5:9191060-9191079 None:intergenic 35.0%
AGTGGTCATACACATATAAC+AGG + Chr5:9190366-9190385 MsG0580024749.01.T01:CDS 35.0%
ATAACACCCTTATTGAAACC+AGG - Chr5:9190598-9190617 None:intergenic 35.0%
ATGAATGTGTTTGTGTGTGT+TGG + Chr5:9187788-9187807 MsG0580024749.01.T01:five_prime_UTR 35.0%
ATGTACGAGACCATTGAAAA+GGG + Chr5:9190164-9190183 MsG0580024749.01.T01:CDS 35.0%
ATGTTCACAAAACTGAGAAG+AGG - Chr5:9191035-9191054 None:intergenic 35.0%
ATTCCAACTTGTGACCAATT+GGG + Chr5:9187297-9187316 MsG0580024749.01.T01:intron 35.0%
ATTGAAAGTGGCTATTCAAC+TGG + Chr5:9190720-9190739 MsG0580024749.01.T01:CDS 35.0%
CAAAAGATGAGGCTTGAAAA+AGG - Chr5:9186973-9186992 None:intergenic 35.0%
CAAACTTGGTTAAGAGTTTG+TGG + Chr5:9188087-9188106 MsG0580024749.01.T01:five_prime_UTR 35.0%
CAAATATGCGTTTCAGCAAT+TGG + Chr5:9189521-9189540 MsG0580024749.01.T01:intron 35.0%
CAATACTTCGAGCAAGATAA+AGG + Chr5:9190956-9190975 MsG0580024749.01.T01:CDS 35.0%
CACAAAACCAAATATGGCTA+TGG - Chr5:9189438-9189457 None:intergenic 35.0%
CACAAACTCTTAACCAAGTT+TGG - Chr5:9188089-9188108 None:intergenic 35.0%
CTCACACTATTATGTTATGC+AGG + Chr5:9191214-9191233 MsG0580024749.01.T01:intron 35.0%
CTGACATAGTCGTTAATGTT+GGG + Chr5:9189751-9189770 MsG0580024749.01.T01:CDS 35.0%
CTGTCAACTATTACAACCAA+TGG + Chr5:9190515-9190534 MsG0580024749.01.T01:intron 35.0%
GAAACAACTAATGGTTCCAA+AGG + Chr5:9190439-9190458 MsG0580024749.01.T01:intron 35.0%
GAAAGGGAAAAGGAAAAGTT+AGG + Chr5:9186802-9186821 MsG0580024749.01.T01:five_prime_UTR 35.0%
GAAGTGGCATATATTTGTTC+AGG + Chr5:9189706-9189725 MsG0580024749.01.T01:intron 35.0%
GAGAAACAAAGAAAGGGAAA+AGG + Chr5:9186792-9186811 MsG0580024749.01.T01:five_prime_UTR 35.0%
GCAAAAGTTAACATTGTCAC+AGG + Chr5:9188977-9188996 MsG0580024749.01.T01:intron 35.0%
GCACATATTTCAAAAGCAAC+AGG - Chr5:9190065-9190084 None:intergenic 35.0%
GTGAGAGGAAAAGAATATGT+AGG + Chr5:9191257-9191276 MsG0580024749.01.T01:intron 35.0%
GTTCCATTCTTTATCAGTCA+AGG + Chr5:9188825-9188844 MsG0580024749.01.T01:intron 35.0%
TAAGAAACCAACCAATGGAT+TGG - Chr5:9188304-9188323 None:intergenic 35.0%
TAGTGTGTGAATGTTGAGTA+TGG + Chr5:9187546-9187565 MsG0580024749.01.T01:five_prime_UTR 35.0%
TATTCCAACTTGTGACCAAT+TGG + Chr5:9187296-9187315 MsG0580024749.01.T01:intron 35.0%
TCTCCTAACATGGTTTATCT+TGG + Chr5:9187835-9187854 MsG0580024749.01.T01:five_prime_UTR 35.0%
TCTGACATAGTCGTTAATGT+TGG + Chr5:9189750-9189769 MsG0580024749.01.T01:CDS 35.0%
TGACATAGTCGTTAATGTTG+GGG + Chr5:9189752-9189771 MsG0580024749.01.T01:CDS 35.0%
TGCAAAGTTCTGTTATGGTA+TGG + Chr5:9190082-9190101 MsG0580024749.01.T01:CDS 35.0%
TTATGTTATGCAGGAACACA+TGG + Chr5:9191223-9191242 MsG0580024749.01.T01:intron 35.0%
TTGATTTCCTTCCAATCCAT+TGG + Chr5:9188290-9188309 MsG0580024749.01.T01:intron 35.0%
! CATAAGTTGAGAGAGAAAGT+GGG + Chr5:9186867-9186886 MsG0580024749.01.T01:five_prime_UTR 35.0%
! CATTGGTTGTAATAGTTGAC+AGG - Chr5:9190517-9190536 None:intergenic 35.0%
! CGTAAACTTTTGGACAAAAG+TGG - Chr5:9189972-9189991 None:intergenic 35.0%
! CTTTTGCAAGCGTAAACTTT+TGG - Chr5:9189982-9190001 None:intergenic 35.0%
! GATGAGATTTCCCTTTTCAA+TGG - Chr5:9190177-9190196 None:intergenic 35.0%
! GTCACAAGTTGGAATAATGA+TGG - Chr5:9187292-9187311 None:intergenic 35.0%
! GTTAGTTTCAAACACAGATG+AGG + Chr5:9190001-9190020 MsG0580024749.01.T01:CDS 35.0%
! TCTTTTGCCATTCCTTTGAT+TGG + Chr5:9186986-9187005 MsG0580024749.01.T01:five_prime_UTR 35.0%
!! AACTTTTGCTTCTTTCTGGT+TGG - Chr5:9188966-9188985 None:intergenic 35.0%
!! AAGTGGGAACATTCTGAAAT+TGG + Chr5:9186883-9186902 MsG0580024749.01.T01:five_prime_UTR 35.0%
!! AATTTTAATAGAGAGTGGGG+CGG + Chr5:9187688-9187707 MsG0580024749.01.T01:five_prime_UTR 35.0%
!! CGAAGTATTGATACCATCTT+GGG - Chr5:9190946-9190965 None:intergenic 35.0%
!! GAAGACGTAAAAGTTCTGAA+AGG + Chr5:9191532-9191551 MsG0580024749.01.T01:CDS 35.0%
!! GAAGTATTGATACCATCTTG+GGG - Chr5:9190945-9190964 None:intergenic 35.0%
!! GTTTTCAGGAGTTCAAAGAA+GGG + Chr5:9187508-9187527 MsG0580024749.01.T01:intron 35.0%
!! TCGAAGTATTGATACCATCT+TGG - Chr5:9190947-9190966 None:intergenic 35.0%
!! TGTTTTCAGGAGTTCAAAGA+AGG + Chr5:9187507-9187526 MsG0580024749.01.T01:intron 35.0%
!!! GACATAAAGCATCGTTTTTG+TGG - Chr5:9187440-9187459 None:intergenic 35.0%
AAAAAGCTCCCATCGGAAAA+TGG + Chr5:9190389-9190408 MsG0580024749.01.T01:CDS 40.0%
AAAAGCTCCCATCGGAAAAT+GGG + Chr5:9190390-9190409 MsG0580024749.01.T01:CDS 40.0%
AAACTGAGAAGAGGCAGATT+AGG - Chr5:9191026-9191045 None:intergenic 40.0%
AACTGCAGCAGATATTGATC+AGG - Chr5:9189948-9189967 None:intergenic 40.0%
AAGGTTGCCTGGTTTCAATA+AGG + Chr5:9190588-9190607 MsG0580024749.01.T01:CDS 40.0%
ACTGCTTTCATAAGCAATCC+TGG + Chr5:9188686-9188705 MsG0580024749.01.T01:intron 40.0%
AGGGAAAAGGAAAAGTTAGG+GGG + Chr5:9186805-9186824 MsG0580024749.01.T01:five_prime_UTR 40.0%
AGGTTCAATAAGCAGCCTAA+AGG - Chr5:9189922-9189941 None:intergenic 40.0%
AGGTTGCCTGGTTTCAATAA+GGG + Chr5:9190589-9190608 MsG0580024749.01.T01:CDS 40.0%
AGTGTGACCATAGCCATATT+TGG + Chr5:9189428-9189447 MsG0580024749.01.T01:intron 40.0%
AGTTGCATCTCTGACAAGTT+CGG + Chr5:9189004-9189023 MsG0580024749.01.T01:intron 40.0%
ATGGAATCAGCAAAAGTGAG+AGG + Chr5:9191242-9191261 MsG0580024749.01.T01:intron 40.0%
CAAAACACACACACACTTTC+TGG - Chr5:9187597-9187616 None:intergenic 40.0%
CAAAGGAATGGCAAAAGATG+AGG - Chr5:9186984-9187003 None:intergenic 40.0%
CAAATCACTTCTTCCATGGT+CGG + Chr5:9190271-9190290 MsG0580024749.01.T01:CDS 40.0%
CAACCAAATCACTTCTTCCA+TGG + Chr5:9190267-9190286 MsG0580024749.01.T01:CDS 40.0%
CAACCAATGGAAATGTTTCC+GGG + Chr5:9190528-9190547 MsG0580024749.01.T01:intron 40.0%
CCACTTTCTCTCTCAACTTA+TGG - Chr5:9186869-9186888 None:intergenic 40.0%
CTAAACAGGTCCTCAAATTG+AGG + Chr5:9188783-9188802 MsG0580024749.01.T01:intron 40.0%
CTAACATGGTTTATCTTGGC+CGG + Chr5:9187839-9187858 MsG0580024749.01.T01:five_prime_UTR 40.0%
CTCGCTGAAGTTATTGAAAG+TGG + Chr5:9190708-9190727 MsG0580024749.01.T01:CDS 40.0%
CTCGCTTATAGAGATCAAGT+TGG - Chr5:9190493-9190512 None:intergenic 40.0%
GAAGCTCTTGTTGGAGTTAA+GGG - Chr5:9188929-9188948 None:intergenic 40.0%
GACACGTTATACACTACCAT+TGG - Chr5:9187401-9187420 None:intergenic 40.0%
GATGTACGAGACCATTGAAA+AGG + Chr5:9190163-9190182 MsG0580024749.01.T01:CDS 40.0%
GCAGGACACAAAACCAAATA+TGG - Chr5:9189444-9189463 None:intergenic 40.0%
GCTCGCTACATAAGTTTATG+TGG + Chr5:9189887-9189906 MsG0580024749.01.T01:intron 40.0%
GCTTCAACAACATCATCATC+AGG + Chr5:9191388-9191407 MsG0580024749.01.T01:CDS 40.0%
GGCTCCAAAATCAAACTAGT+TGG + Chr5:9189377-9189396 MsG0580024749.01.T01:intron 40.0%
GGTTTATTGCCGGTAGATAT+GGG + Chr5:9190667-9190686 MsG0580024749.01.T01:CDS 40.0%
GTAACAAAGTCCAAAGAGAC+CGG - Chr5:9187861-9187880 None:intergenic 40.0%
GTGGTGTCTAAATCCATTGT+TGG + Chr5:9187628-9187647 MsG0580024749.01.T01:five_prime_UTR 40.0%
TAACAGGAAAAAGCTCCCAT+CGG + Chr5:9190382-9190401 MsG0580024749.01.T01:CDS 40.0%
TAATGGTTCCAAAGGATTGG+TGG + Chr5:9190447-9190466 MsG0580024749.01.T01:intron 40.0%
TAGCTATGGACTCGATACAA+TGG - Chr5:9190316-9190335 None:intergenic 40.0%
TCAACAACATCATCATCAGG+AGG + Chr5:9191391-9191410 MsG0580024749.01.T01:CDS 40.0%
TCAACTGGATTGTGAAGTGT+CGG + Chr5:9190735-9190754 MsG0580024749.01.T01:CDS 40.0%
TCTTTGTGATATCACCACTC+TGG - Chr5:9190621-9190640 None:intergenic 40.0%
TGAGTCTCCGAAATTCAGTT+CGG - Chr5:9191198-9191217 None:intergenic 40.0%
TGCATTGAAACCAACCCAAT+TGG - Chr5:9187314-9187333 None:intergenic 40.0%
TGGTTAAGAGTTTGTGGAGT+AGG + Chr5:9188093-9188112 MsG0580024749.01.T01:five_prime_UTR 40.0%
TGTAGATGCTGAGTTACAGT+TGG + Chr5:9189071-9189090 MsG0580024749.01.T01:intron 40.0%
TGTTGGAGTTAAGGGAGAAT+AGG - Chr5:9188921-9188940 None:intergenic 40.0%
TTCAGTTCGGTTGAAGTCAT+TGG - Chr5:9191185-9191204 None:intergenic 40.0%
TTTCCTAGACAGTCTCATGA+CGG + Chr5:9191074-9191093 MsG0580024749.01.T01:CDS 40.0%
TTTCCTTCCAATCCATTGGT+TGG + Chr5:9188294-9188313 MsG0580024749.01.T01:intron 40.0%
! AATGGTTCCAAAGGATTGGT+GGG + Chr5:9190448-9190467 MsG0580024749.01.T01:intron 40.0%
! CCATAAGTTGAGAGAGAAAG+TGG + Chr5:9186866-9186885 MsG0580024749.01.T01:five_prime_UTR 40.0%
! CGTAAATATGCAAAAGGTGC+AGG - Chr5:9189462-9189481 None:intergenic 40.0%
! TGGTGTCAGATAGAACTAGT+GGG + Chr5:9187711-9187730 MsG0580024749.01.T01:five_prime_UTR 40.0%
!! AAACCAACCAATGGATTGGA+AGG - Chr5:9188300-9188319 None:intergenic 40.0%
!! AATAAGGGTGTTATCCAGAG+TGG + Chr5:9190604-9190623 MsG0580024749.01.T01:CDS 40.0%
!! ACACTCTGAAGTTTGGTTCA+GGG - Chr5:9189413-9189432 None:intergenic 40.0%
!! ATCTAACTAGCCTTGGTTTG+TGG + Chr5:9187969-9187988 MsG0580024749.01.T01:five_prime_UTR 40.0%
!! CTTGGTTTGTGGGAAAGATT+CGG + Chr5:9187980-9187999 MsG0580024749.01.T01:five_prime_UTR 40.0%
!! GACTATTGTCGGTTTATTGC+CGG + Chr5:9190657-9190676 MsG0580024749.01.T01:CDS 40.0%
!! GGGAACATTCTGAAATTGGT+TGG + Chr5:9186887-9186906 MsG0580024749.01.T01:five_prime_UTR 40.0%
!! GTTGGTAATGTCTCCTAACA+TGG + Chr5:9187825-9187844 MsG0580024749.01.T01:five_prime_UTR 40.0%
!! TATGGTCACACTCTGAAGTT+TGG - Chr5:9189420-9189439 None:intergenic 40.0%
!! TCTAACTAGCCTTGGTTTGT+GGG + Chr5:9187970-9187989 MsG0580024749.01.T01:five_prime_UTR 40.0%
!! TTTTGTGAACATCGCCGATT+TGG + Chr5:9191043-9191062 MsG0580024749.01.T01:CDS 40.0%
AAAATGGGAACGAAGCACAC+TGG + Chr5:9190405-9190424 MsG0580024749.01.T01:CDS 45.0%
AAATGTTTCCGGGCAGTTGT+CGG + Chr5:9190538-9190557 MsG0580024749.01.T01:intron 45.0%
ACAAGAGCTTCCATCTCACT+AGG + Chr5:9188938-9188957 MsG0580024749.01.T01:intron 45.0%
ACACGAGCATCAATCTTCGA+TGG + Chr5:9190894-9190913 MsG0580024749.01.T01:intron 45.0%
ACCTGTACAACGACACGTAA+AGG - Chr5:9191346-9191365 None:intergenic 45.0%
AGGAGTTCAAAGAAGGGACA+TGG + Chr5:9187514-9187533 MsG0580024749.01.T01:intron 45.0%
AGTGAGATGGAAGCTCTTGT+TGG - Chr5:9188938-9188957 None:intergenic 45.0%
ATCCCATTCCTCTTCTGTGT+TGG - Chr5:9191497-9191516 None:intergenic 45.0%
ATCTTAAGTTCCTCCGACCA+TGG - Chr5:9190287-9190306 None:intergenic 45.0%
ATTCACATCCACGACATTCC+TGG + Chr5:9190035-9190054 MsG0580024749.01.T01:CDS 45.0%
CAACCCAATTGGTCACAAGT+TGG - Chr5:9187303-9187322 None:intergenic 45.0%
CAACTTGTGACCAATTGGGT+TGG + Chr5:9187301-9187320 MsG0580024749.01.T01:intron 45.0%
CAAGAGCTTCCATCTCACTA+GGG + Chr5:9188939-9188958 MsG0580024749.01.T01:intron 45.0%
CGAATCTTTCCCACAAACCA+AGG - Chr5:9187982-9188001 None:intergenic 45.0%
CGACCATGGAAGAAGTGATT+TGG - Chr5:9190273-9190292 None:intergenic 45.0%
CGGCCAAGATAAACCATGTT+AGG - Chr5:9187841-9187860 None:intergenic 45.0%
CGGTGTGAGGAAACAACTAA+TGG + Chr5:9190430-9190449 MsG0580024749.01.T01:intron 45.0%
CGGTTTATTGCCGGTAGATA+TGG + Chr5:9190666-9190685 MsG0580024749.01.T01:CDS 45.0%
CTTATTTCCAGAAGCTCTCC+AGG - Chr5:9188707-9188726 None:intergenic 45.0%
GAAAAGGAAAAGTTAGGGGG+TGG + Chr5:9186808-9186827 MsG0580024749.01.T01:five_prime_UTR 45.0%
GACCAACACAGAAGAGGAAT+GGG + Chr5:9191492-9191511 MsG0580024749.01.T01:CDS 45.0%
GGAAGCTCTTGTTGGAGTTA+AGG - Chr5:9188930-9188949 None:intergenic 45.0%
GGTGTCAGATAGAACTAGTG+GGG + Chr5:9187712-9187731 MsG0580024749.01.T01:five_prime_UTR 45.0%
GTGGCTGTCATCAAAAGATG+AGG + Chr5:9186937-9186956 MsG0580024749.01.T01:five_prime_UTR 45.0%
GTGTCAGATAGAACTAGTGG+GGG + Chr5:9187713-9187732 MsG0580024749.01.T01:five_prime_UTR 45.0%
TAAGTGCGTACACCTCTAGA+AGG + Chr5:9190569-9190588 MsG0580024749.01.T01:CDS 45.0%
TATCGAGTCCATAGCTACCA+AGG + Chr5:9190319-9190338 MsG0580024749.01.T01:CDS 45.0%
TCCTGAAAATGCTGGAGTTG+AGG - Chr5:9190217-9190236 None:intergenic 45.0%
TGTGTTTGTGTAGCTAGCTG+TGG + Chr5:9186915-9186934 MsG0580024749.01.T01:five_prime_UTR 45.0%
TTCGATGGAAGACGAATTGC+AGG + Chr5:9190909-9190928 MsG0580024749.01.T01:intron 45.0%
TTTATCTTGGCCGGTCTCTT+TGG + Chr5:9187848-9187867 MsG0580024749.01.T01:five_prime_UTR 45.0%
TTTCCAGCTCCTGAAAATGC+TGG - Chr5:9190225-9190244 None:intergenic 45.0%
! CTTCGTTCCCATTTTCCGAT+GGG - Chr5:9190400-9190419 None:intergenic 45.0%
! GGGAAAGATTCGGTCATACA+AGG + Chr5:9187990-9188009 MsG0580024749.01.T01:five_prime_UTR 45.0%
! GTGGTGTCAGATAGAACTAG+TGG + Chr5:9187710-9187729 MsG0580024749.01.T01:five_prime_UTR 45.0%
! TCCTCAACTCCAGCATTTTC+AGG + Chr5:9190213-9190232 MsG0580024749.01.T01:CDS 45.0%
! TCCTTTACGTGTCGTTGTAC+AGG + Chr5:9191342-9191361 MsG0580024749.01.T01:intron 45.0%
!! CACACTCTGAAGTTTGGTTC+AGG - Chr5:9189414-9189433 None:intergenic 45.0%
!! TATGTAGGTTGATGGACTGC+AGG + Chr5:9191272-9191291 MsG0580024749.01.T01:intron 45.0%
!!! CTTTTGATTTGTGCGTCAGC+TGG + Chr5:9190817-9190836 MsG0580024749.01.T01:CDS 45.0%
AAGCAATCCTGGAGAGCTTC+TGG + Chr5:9188697-9188716 MsG0580024749.01.T01:intron 50.0%
AAGGAAAAGTTAGGGGGTGG+TGG + Chr5:9186811-9186830 MsG0580024749.01.T01:five_prime_UTR 50.0%
AGAAGAGGAATGGGATGCTG+TGG + Chr5:9191501-9191520 MsG0580024749.01.T01:CDS 50.0%
AGACCGTCATGAGACTGTCT+AGG - Chr5:9191080-9191099 None:intergenic 50.0%
AGGAAAAGTTAGGGGGTGGT+GGG + Chr5:9186812-9186831 MsG0580024749.01.T01:five_prime_UTR 50.0%
ATCACTTCTTCCATGGTCGG+AGG + Chr5:9190274-9190293 MsG0580024749.01.T01:CDS 50.0%
ATGCAATGCCCTGATGGAAC+CGG - Chr5:9191437-9191456 None:intergenic 50.0%
CATAGCTACCAAGGCTTCGA+TGG + Chr5:9190328-9190347 MsG0580024749.01.T01:CDS 50.0%
CGACCAACACAGAAGAGGAA+TGG + Chr5:9191491-9191510 MsG0580024749.01.T01:CDS 50.0%
CTGCCCGGAAACATTTCCAT+TGG - Chr5:9190534-9190553 None:intergenic 50.0%
GAAACCAGGCAACCTTCTAG+AGG - Chr5:9190584-9190603 None:intergenic 50.0%
GAGCCACTTCCCATATCTAC+CGG - Chr5:9190679-9190698 None:intergenic 50.0%
GATATGGGAAGTGGCTCATG+CGG + Chr5:9190682-9190701 MsG0580024749.01.T01:CDS 50.0%
GATCACGTGCAATCTCAGCA+AGG - Chr5:9191004-9191023 None:intergenic 50.0%
GTGGTTCTCACGGTAGTTCA+AGG + Chr5:9191461-9191480 MsG0580024749.01.T01:CDS 50.0%
GTTTGTGTAGCTAGCTGTGG+TGG + Chr5:9186918-9186937 MsG0580024749.01.T01:five_prime_UTR 50.0%
TACCACGACCAACACAGAAG+AGG + Chr5:9191486-9191505 MsG0580024749.01.T01:CDS 50.0%
TATGACCACTCCACCTTGGA+TGG - Chr5:9190356-9190375 None:intergenic 50.0%
TCAAAAGCAACAGGTCCTCC+AGG - Chr5:9190056-9190075 None:intergenic 50.0%
TCTTCCACCCACCAATCCTT+TGG - Chr5:9190458-9190477 None:intergenic 50.0%
TGAACTACCGTGAGAACCAC+CGG - Chr5:9191461-9191480 None:intergenic 50.0%
TGATCTTCCCGGTTCCATCA+GGG + Chr5:9191426-9191445 MsG0580024749.01.T01:CDS 50.0%
TGCATGCAGTGCAGAATGAG+CGG + Chr5:9191317-9191336 MsG0580024749.01.T01:intron 50.0%
TGTGTATGACCACTCCACCT+TGG - Chr5:9190360-9190379 None:intergenic 50.0%
TTCGATGGATCCATCCAAGG+TGG + Chr5:9190343-9190362 MsG0580024749.01.T01:CDS 50.0%
TTGCCGGTAGATATGGGAAG+TGG + Chr5:9190673-9190692 MsG0580024749.01.T01:CDS 50.0%
TTTAATAGAGAGTGGGGCGG+TGG + Chr5:9187691-9187710 MsG0580024749.01.T01:five_prime_UTR 50.0%
! CATCGAAGCCTTGGTAGCTA+TGG - Chr5:9190330-9190349 None:intergenic 50.0%
! GCTTCGTTCCCATTTTCCGA+TGG - Chr5:9190401-9190420 None:intergenic 50.0%
! TACACCTCTAGAAGGTTGCC+TGG + Chr5:9190577-9190596 MsG0580024749.01.T01:CDS 50.0%
! TTCCTCTTCTGTGTTGGTCG+TGG - Chr5:9191491-9191510 None:intergenic 50.0%
!! ACTCCAGCATTTTCAGGAGC+TGG + Chr5:9190219-9190238 MsG0580024749.01.T01:CDS 50.0%
AAGCACACTGGAACGGTGTG+AGG + Chr5:9190417-9190436 MsG0580024749.01.T01:intron 55.0%
ACGAGCACTCCTGATCTTCC+CGG + Chr5:9191415-9191434 MsG0580024749.01.T01:CDS 55.0%
CACATCCACGACATTCCTGG+AGG + Chr5:9190038-9190057 MsG0580024749.01.T01:CDS 55.0%
CAGGTATGTGGCAACTGAGC+TGG + Chr5:9189725-9189744 MsG0580024749.01.T01:intron 55.0%
CGGTGAGATCCGAACTGATG+CGG + Chr5:9190755-9190774 MsG0580024749.01.T01:CDS 55.0%
CTGATCTTCCCGGTTCCATC+AGG + Chr5:9191425-9191444 MsG0580024749.01.T01:CDS 55.0%
CTGATGGAACCGGGAAGATC+AGG - Chr5:9191427-9191446 None:intergenic 55.0%
CTGGTTGGACCCTAGTGAGA+TGG - Chr5:9188951-9188970 None:intergenic 55.0%
GAACTACCGTGAGAACCACC+GGG - Chr5:9191460-9191479 None:intergenic 55.0%
GCCTATCCTCCGCATCAGTT+CGG - Chr5:9190767-9190786 None:intergenic 55.0%
GGAAAAGTTAGGGGGTGGTG+GGG + Chr5:9186813-9186832 MsG0580024749.01.T01:five_prime_UTR 55.0%
GGAGATCAGAAGCCCCAAGA+TGG + Chr5:9190930-9190949 MsG0580024749.01.T01:intron 55.0%
GGATGGATCCATCGAAGCCT+TGG - Chr5:9190339-9190358 None:intergenic 55.0%
GGCTTCGATGGATCCATCCA+AGG + Chr5:9190340-9190359 MsG0580024749.01.T01:CDS 55.0%
GGGAACGAAGCACACTGGAA+CGG + Chr5:9190410-9190429 MsG0580024749.01.T01:CDS 55.0%
TCCGAACTGATGCGGAGGAT+AGG + Chr5:9190763-9190782 MsG0580024749.01.T01:CDS 55.0%
TGAGATCCGAACTGATGCGG+AGG + Chr5:9190758-9190777 MsG0580024749.01.T01:CDS 55.0%
TGCAATGCCCTGATGGAACC+GGG - Chr5:9191436-9191455 None:intergenic 55.0%
TGGATCCATCCAAGGTGGAG+TGG + Chr5:9190348-9190367 MsG0580024749.01.T01:CDS 55.0%
TTGCATCCCGGTGGTTCTCA+CGG + Chr5:9191451-9191470 MsG0580024749.01.T01:CDS 55.0%
! GAAAAGTTAGGGGGTGGTGG+GGG + Chr5:9186814-9186833 MsG0580024749.01.T01:five_prime_UTR 55.0%
! GGTTCCAAAGGATTGGTGGG+TGG + Chr5:9190451-9190470 MsG0580024749.01.T01:intron 55.0%
!! TCCATCAGGGCATTGCATCC+CGG + Chr5:9191439-9191458 MsG0580024749.01.T01:CDS 55.0%
ACCGGGATGCAATGCCCTGA+TGG - Chr5:9191443-9191462 None:intergenic 60.0%
AGTTGCAGCTCGCTGTGCAG+CGG + Chr5:9190130-9190149 MsG0580024749.01.T01:CDS 60.0%
CAGGTCCTCCAGGAATGTCG+TGG - Chr5:9190046-9190065 None:intergenic 60.0%
GAGCTTCTCCGACAACTGCC+CGG - Chr5:9190549-9190568 None:intergenic 60.0%
!! ATCAGGGCATTGCATCCCGG+TGG + Chr5:9191442-9191461 MsG0580024749.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 9186792 9191570 9186792 ID=MsG0580024749.01;Name=MsG0580024749.01
Chr5 mRNA 9186792 9191570 9186792 ID=MsG0580024749.01.T01;Parent=MsG0580024749.01;Name=MsG0580024749.01.T01;_AED=0.29;_eAED=0.29;_QI=1006|0.57|0.37|1|0.85|0.75|8|0|435
Chr5 exon 9186792 9187154 9186792 ID=MsG0580024749.01.T01:exon:26417;Parent=MsG0580024749.01.T01
Chr5 exon 9187516 9188220 9187516 ID=MsG0580024749.01.T01:exon:26418;Parent=MsG0580024749.01.T01
Chr5 exon 9189728 9189797 9189728 ID=MsG0580024749.01.T01:exon:26419;Parent=MsG0580024749.01.T01
Chr5 exon 9189966 9190431 9189966 ID=MsG0580024749.01.T01:exon:26420;Parent=MsG0580024749.01.T01
Chr5 exon 9190554 9190838 9190554 ID=MsG0580024749.01.T01:exon:26421;Parent=MsG0580024749.01.T01
Chr5 exon 9190931 9191127 9190931 ID=MsG0580024749.01.T01:exon:26422;Parent=MsG0580024749.01.T01
Chr5 exon 9191236 9191256 9191236 ID=MsG0580024749.01.T01:exon:26423;Parent=MsG0580024749.01.T01
Chr5 exon 9191364 9191570 9191364 ID=MsG0580024749.01.T01:exon:26424;Parent=MsG0580024749.01.T01
Chr5 five_prime_UTR 9186792 9187154 9186792 ID=MsG0580024749.01.T01:five_prime_utr;Parent=MsG0580024749.01.T01
Chr5 five_prime_UTR 9187516 9188158 9187516 ID=MsG0580024749.01.T01:five_prime_utr;Parent=MsG0580024749.01.T01
Chr5 CDS 9188159 9188220 9188159 ID=MsG0580024749.01.T01:cds;Parent=MsG0580024749.01.T01
Chr5 CDS 9189728 9189797 9189728 ID=MsG0580024749.01.T01:cds;Parent=MsG0580024749.01.T01
Chr5 CDS 9189966 9190431 9189966 ID=MsG0580024749.01.T01:cds;Parent=MsG0580024749.01.T01
Chr5 CDS 9190554 9190838 9190554 ID=MsG0580024749.01.T01:cds;Parent=MsG0580024749.01.T01
Chr5 CDS 9190931 9191127 9190931 ID=MsG0580024749.01.T01:cds;Parent=MsG0580024749.01.T01
Chr5 CDS 9191236 9191256 9191236 ID=MsG0580024749.01.T01:cds;Parent=MsG0580024749.01.T01
Chr5 CDS 9191364 9191570 9191364 ID=MsG0580024749.01.T01:cds;Parent=MsG0580024749.01.T01
Gene Sequence

>MsG0580024749.01.T01

ATGAAGTTTATGAAACTTGGATCTAAGCCTGATTCTTTTCAAAATGATGGAGATAATGTTAGGTATGTGGCAACTGAGCTGGCATCTGACATAGTCGTTAATGTTGGGGACGTAAAATTTTATCTACATAAGTTTCCACTTTTGTCCAAAAGTTTACGCTTGCAAAAGTTAGTTTCAAACACAGATGAGGAGAATGACGAAATTCACATCCACGACATTCCTGGAGGACCTGTTGCTTTTGAAATATGTGCAAAGTTCTGTTATGGTATGGTTGTCACTCTAAATGCATACAATGTAGTTGCAGCTCGCTGTGCAGCGGAGTATCTTGAGATGTACGAGACCATTGAAAAGGGAAATCTCATCTACAAGATTGAAGTTTTCCTCAACTCCAGCATTTTCAGGAGCTGGAAAGATTCTATTATTGTTCTACAAACAACCAAATCACTTCTTCCATGGTCGGAGGAACTTAAGATCGTGAGCCATTGTATCGAGTCCATAGCTACCAAGGCTTCGATGGATCCATCCAAGGTGGAGTGGTCATACACATATAACAGGAAAAAGCTCCCATCGGAAAATGGGAACGAAGCACACTGGAACGTTGTCGGAGAAGCTCTAAGTGCGTACACCTCTAGAAGGTTGCCTGGTTTCAATAAGGGTGTTATCCAGAGTGGTGATATCACAAAGAATAGATTATTATTGGAGACTATTGTCGGTTTATTGCCGGTAGATATGGGAAGTGGCTCATGCGGTTTCTCGCTGAAGTTATTGAAAGTGGCTATTCAACTGGATTGTGAAGTGTCGGTGAGATCCGAACTGATGCGGAGGATAGGCCAGAGGCTTGAGGAGGCTACGGTGGCTGATCTTTTGATTTGTGCGTCAGCTGGAGATCAGAAGCCCCAAGATGGTATCAATACTTCGAGCAAGATAAAGGTTGCAAAGCTTGTCGATAGCTACCTTGCTGAGATTGCACGTGATCCTAATCTGCCTCTTCTCAGTTTTGTGAACATCGCCGATTTGGTATCAAGCTTTCCTAGACAGTCTCATGACGGTCTTTATCGTGCCATTGACATGTATTTAAAGGAACACATGGAATCAGCAAAAGTTCTCTTCTTTGAGCAGATGAGAGCTTCAACAACATCATCATCAGGAGGCACGAGCACTCCTGATCTTCCCGGTTCCATCAGGGCATTGCATCCCGGTGGTTCTCACGGTAGTTCAAGGTCTACCACGACCAACACAGAAGAGGAATGGGATGCTGTGGCAACAGCAGAAGACGTAAAAGTTCTGAAAGGGAACTCGCCGCACTAA
Protein sequence

>MsG0580024749.01.T01

MKFMKLGSKPDSFQNDGDNVRYVATELASDIVVNVGDVKFYLHKFPLLSKSLRLQKLVSNTDEENDEIHIHDIPGGPVAFEICAKFCYGMVVTLNAYNVVAARCAAEYLEMYETIEKGNLIYKIEVFLNSSIFRSWKDSIIVLQTTKSLLPWSEELKIVSHCIESIATKASMDPSKVEWSYTYNRKKLPSENGNEAHWNVVGEALSAYTSRRLPGFNKGVIQSGDITKNRLLLETIVGLLPVDMGSGSCGFSLKLLKVAIQLDCEVSVRSELMRRIGQRLEEATVADLLICASAGDQKPQDGINTSSKIKVAKLVDSYLAEIARDPNLPLLSFVNIADLVSSFPRQSHDGLYRAIDMYLKEHMESAKVLFFEQMRASTTSSSGGTSTPDLPGSIRALHPGGSHGSSRSTTTNTEEEWDAVATAEDVKVLKGNSPH*