AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004989.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004989.01.T01 MTR_1g090740 77.494 431 51 6 45 464 1 396 0.0 617
MsG0180004989.01.T01 MTR_7g113200 45.427 328 152 6 56 378 171 476 9.75e-95 295
MsG0180004989.01.T01 MTR_7g113200 45.427 328 152 6 56 378 171 476 2.34e-93 297
MsG0180004989.01.T01 MTR_4g119100 34.848 330 185 7 57 378 81 388 2.27e-45 169
MsG0180004989.01.T01 MTR_4g119100 34.848 330 185 7 57 378 82 389 2.91e-45 169
MsG0180004989.01.T01 MTR_4g119100 34.848 330 185 7 57 378 82 389 3.26e-45 168
MsG0180004989.01.T01 MTR_2g019860 31.307 329 202 6 55 378 72 381 1.57e-41 158
MsG0180004989.01.T01 MTR_1g084120 35.263 190 109 7 195 378 78 259 1.65e-24 107
MsG0180004989.01.T01 MTR_1g084120 31.016 187 122 5 195 378 128 310 1.84e-19 92.0
MsG0180004989.01.T01 MTR_1g084120 29.075 227 140 8 195 417 28 237 1.79e-16 82.8
MsG0180004989.01.T01 MTR_1g084120 27.179 195 125 4 137 330 138 316 1.16e-14 77.0
MsG0180004989.01.T01 MTR_4g109680 29.126 206 119 6 137 334 87 273 3.16e-22 100
MsG0180004989.01.T01 MTR_4g109680 31.387 137 87 3 204 334 36 171 1.31e-14 76.6
MsG0180004989.01.T01 MTR_4g109680 27.027 185 122 4 123 306 123 295 4.29e-11 65.9
MsG0180004989.01.T01 MTR_2g036510 33.152 184 108 8 194 369 295 471 1.60e-13 73.2
MsG0180004989.01.T01 MTR_4g132120 31.148 122 83 1 195 316 336 456 2.29e-13 73.2
MsG0180004989.01.T01 MTR_8g105590 27.072 181 123 5 194 369 315 491 1.20e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004989.01.T01 AT5G04420 48.307 443 177 7 39 464 2 409 7.83e-128 382
MsG0180004989.01.T01 AT5G04420 48.307 443 177 7 39 464 2 409 7.83e-128 382
MsG0180004989.01.T01 AT5G04420 48.307 443 177 7 39 464 2 409 7.83e-128 382
MsG0180004989.01.T01 AT3G05420 41.063 414 213 9 56 463 169 557 2.16e-95 303
MsG0180004989.01.T01 AT3G05420 41.063 414 213 9 56 463 168 556 2.27e-95 302
MsG0180004989.01.T01 AT5G27630 39.310 435 229 12 56 484 169 574 4.29e-92 294
MsG0180004989.01.T01 AT5G27630 44.817 328 159 5 56 378 169 479 5.71e-92 291
MsG0180004989.01.T01 AT5G27630 44.817 328 159 5 56 378 169 479 9.06e-92 293
MsG0180004989.01.T01 AT5G27630 44.817 328 159 5 56 378 169 479 9.40e-92 293
MsG0180004989.01.T01 AT5G18590 29.805 359 221 6 32 378 32 371 9.34e-38 147
MsG0180004989.01.T01 AT5G18590 29.805 359 221 6 32 378 32 371 9.34e-38 147
MsG0180004989.01.T01 AT1G18610 25.993 277 164 7 126 378 76 335 2.66e-21 97.4
MsG0180004989.01.T01 AT1G18610 26.667 255 165 7 69 319 75 311 3.00e-14 75.5
MsG0180004989.01.T01 AT1G18610 27.619 210 134 7 204 405 36 235 6.94e-13 71.2
MsG0180004989.01.T01 AT1G18610 27.273 176 116 6 239 412 18 183 1.99e-11 66.6
MsG0180004989.01.T01 AT1G18610 25.993 277 164 7 126 378 76 335 2.66e-21 97.4
MsG0180004989.01.T01 AT1G18610 26.667 255 165 7 69 319 75 311 3.00e-14 75.5
MsG0180004989.01.T01 AT1G18610 27.619 210 134 7 204 405 36 235 6.94e-13 71.2
MsG0180004989.01.T01 AT1G18610 27.273 176 116 6 239 412 18 183 1.99e-11 66.6
MsG0180004989.01.T01 AT1G74150 22.034 295 199 8 195 483 109 378 4.43e-17 84.3
MsG0180004989.01.T01 AT1G74150 33.880 183 107 6 195 370 59 234 5.15e-16 81.3
MsG0180004989.01.T01 AT1G74150 28.788 198 123 6 130 322 111 295 7.46e-12 68.2
MsG0180004989.01.T01 AT1G74150 21.727 359 233 12 131 483 78 394 7.06e-17 84.0
MsG0180004989.01.T01 AT1G74150 29.747 158 102 4 204 355 33 187 2.22e-14 75.9
MsG0180004989.01.T01 AT1G74150 21.727 359 233 12 131 483 78 394 7.22e-17 84.0
MsG0180004989.01.T01 AT1G74150 29.747 158 102 4 204 355 33 187 2.08e-14 76.3
MsG0180004989.01.T01 AT1G74150 24.180 244 162 6 131 368 78 304 3.93e-16 81.6
MsG0180004989.01.T01 AT1G74150 29.747 158 102 4 204 355 33 187 2.00e-14 76.3
MsG0180004989.01.T01 AT1G74150 28.934 197 122 6 131 322 128 311 1.73e-11 67.0
MsG0180004989.01.T01 AT4G04670 23.676 321 220 7 73 389 270 569 1.35e-14 77.0
MsG0180004989.01.T01 AT1G68050 29.648 199 119 9 185 369 289 480 3.33e-13 72.4
MsG0180004989.01.T01 AT1G74150 34.328 134 81 4 194 322 14 145 2.96e-11 65.5
MsG0180004989.01.T01 AT1G74150 21.032 252 173 7 233 483 2 228 9.77e-11 63.9
MsG0180004989.01.T01 AT1G74150 34.328 134 81 4 194 322 14 145 2.96e-11 65.5
MsG0180004989.01.T01 AT1G74150 21.032 252 173 7 233 483 2 228 9.77e-11 63.9

Find 146 sgRNAs with CRISPR-Local

Find 453 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTATAGATACTAACCTTTA+AGG 0.083065 1:+85289736 None:intergenic
AAGAACTTACATATGATAAT+TGG 0.170068 1:-85290499 MsG0180004989.01.T01:CDS
TAAAGAAGAAAAGAGGTTAT+TGG 0.262402 1:-85284957 MsG0180004989.01.T01:CDS
ATGTTTAAGACCAGGGTTTC+AGG 0.262450 1:+85286960 None:intergenic
AATGCCACTAAAAGTGATTT+TGG 0.267019 1:-85284435 MsG0180004989.01.T01:three_prime_UTR
GGACACTTCTGATACCTTAA+AGG 0.272012 1:-85289750 MsG0180004989.01.T01:CDS
CAATTTGTCCCTGACTGATT+GGG 0.276138 1:+85284757 None:intergenic
GAAACATATCTGTTTGCTTT+TGG 0.282847 1:-85286124 MsG0180004989.01.T01:CDS
CCGCCCACCTGCTCGCTATA+AGG 0.289459 1:-85290453 MsG0180004989.01.T01:intron
GTTTGAGTTATTAAGACTTC+TGG 0.290966 1:-85289255 MsG0180004989.01.T01:CDS
TCACAGTTTGCAAGTCTAAT+AGG 0.321039 1:+85288540 None:intergenic
CGCAAAGTGTCCGTTTGCCT+TGG 0.343729 1:+85285151 None:intergenic
ACAATTTGTCCCTGACTGAT+TGG 0.346092 1:+85284756 None:intergenic
ATTGGGTACATTACTGTAAC+TGG 0.349386 1:-85290481 MsG0180004989.01.T01:CDS
GACAGAGTTCTGGTGGAGTT+TGG 0.351710 1:-85284498 MsG0180004989.01.T01:three_prime_UTR
CAATATACATACTAATATAA+TGG 0.352034 1:+85284168 None:intergenic
AGTTTGGCGATTGTTTGGTT+GGG 0.357722 1:-85284482 MsG0180004989.01.T01:three_prime_UTR
ACTAAATAACATAAAACATT+TGG 0.358700 1:+85284376 None:intergenic
ACTCCCAAGTCATCTGTAAA+TGG 0.365726 1:-85285018 MsG0180004989.01.T01:CDS
TGCCACATCTGGTCACAATA+TGG 0.375410 1:-85289960 MsG0180004989.01.T01:intron
GATGTTGAGCTCCAACTTGA+TGG 0.376597 1:-85284286 MsG0180004989.01.T01:three_prime_UTR
TAAACATGTCGAAACTTGTT+TGG 0.377544 1:-85286944 MsG0180004989.01.T01:CDS
GAAGTTGGATTTCATGCAAC+TGG 0.379660 1:-85285049 MsG0180004989.01.T01:CDS
TAAGACTTCTGGAAGTGTTC+CGG 0.385440 1:-85289244 MsG0180004989.01.T01:intron
CTAAAGCTAAAAGCTGATAC+TGG 0.386047 1:-85290019 MsG0180004989.01.T01:CDS
GGGGAGAAACTACTTATTCT+TGG 0.386469 1:-85289785 MsG0180004989.01.T01:CDS
AGAGATCAAGATGCTTTAAC+TGG 0.390033 1:-85284730 MsG0180004989.01.T01:three_prime_UTR
GAGTTTGGCGATTGTTTGGT+TGG 0.390375 1:-85284483 MsG0180004989.01.T01:three_prime_UTR
GCATTCCTTGCTACAGAGCT+TGG 0.392047 1:-85284340 MsG0180004989.01.T01:three_prime_UTR
TTATTCTTGGTGGCAGTTCA+AGG 0.395862 1:-85289772 MsG0180004989.01.T01:CDS
GCTGATACTGGAAAAGATAA+TGG 0.398474 1:-85290007 MsG0180004989.01.T01:CDS
GCTGCAGCGGCTGCAGCAGC+CGG 0.402190 1:+85285108 None:intergenic
TCGGCATTTATCGGATGTTC+AGG 0.402211 1:-85290146 MsG0180004989.01.T01:intron
GTATCACTATTGATGAAAAC+TGG 0.404474 1:-85287397 MsG0180004989.01.T01:CDS
TTCAGGAACCCCAATCAGTC+AGG 0.407828 1:-85284766 MsG0180004989.01.T01:intron
TATTGTTTGCTGGTGAAGAT+AGG 0.410603 1:-85288832 MsG0180004989.01.T01:CDS
TCGTAATGGTCGGCATTTAT+CGG 0.414181 1:-85290155 MsG0180004989.01.T01:CDS
GAAGTCTTAATAACTCAAAC+TGG 0.415429 1:+85289258 None:intergenic
GAGAATCTGCCTGCCACATC+TGG 0.415971 1:-85289971 MsG0180004989.01.T01:CDS
TCAAGAGTTATATTGTTTGC+TGG 0.420352 1:-85288842 MsG0180004989.01.T01:CDS
GCCGGTGGACTGGAAAATCT+TGG 0.421467 1:+85285126 None:intergenic
GTTTGGCGATTGTTTGGTTG+GGG 0.422005 1:-85284481 MsG0180004989.01.T01:three_prime_UTR
TAGCGGCGGGGAAGGGTTGG+TGG 0.434184 1:-85289069 MsG0180004989.01.T01:CDS
GGCTGCAGCAGCCGGTGGAC+TGG 0.437652 1:+85285116 None:intergenic
TTGCAGCGTGCTCCATCTCC+TGG 0.437877 1:+85284530 None:intergenic
AATTGTCAATTACAGAAGTC+AGG 0.438333 1:-85284934 MsG0180004989.01.T01:CDS
AAAGGAGAATCAGAGAGAAA+TGG 0.438995 1:-85290540 MsG0180004989.01.T01:CDS
ATCACCTTGATTGTCACTTC+AGG 0.439632 1:+85290590 None:intergenic
GAAGCATTAAAGAAGAAAAG+AGG 0.443346 1:-85284964 MsG0180004989.01.T01:CDS
GAGAAATGGAAGTCAACAAT+TGG 0.443435 1:-85290526 MsG0180004989.01.T01:CDS
CGTACTGTAACAAGTATTCC+TGG 0.446848 1:-85290566 MsG0180004989.01.T01:CDS
GCAAAGTGTCCGTTTGCCTT+GGG 0.449039 1:+85285152 None:intergenic
GGTGGAGTTTGGCGATTGTT+TGG 0.453020 1:-85284487 MsG0180004989.01.T01:three_prime_UTR
AGAACTTACATATGATAATT+GGG 0.453526 1:-85290498 MsG0180004989.01.T01:CDS
GCAGCGGCTGCAGCAGCCGG+TGG 0.454566 1:+85285111 None:intergenic
AACCCTTGTAGCGGCGGGGA+AGG 0.456290 1:-85289077 MsG0180004989.01.T01:intron
AGACAAAACACATACAATCA+TGG 0.457387 1:+85290708 None:intergenic
AATGCAGTCTGTGGAAGATC+AGG 0.457540 1:-85284585 MsG0180004989.01.T01:three_prime_UTR
GCAGCTGCATGATCATATCT+AGG 0.458106 1:+85288632 None:intergenic
AACAAGTATTCCTGGACAAA+AGG 0.461113 1:-85290558 MsG0180004989.01.T01:CDS
TGGACTGCAACTTTCAAAGA+TGG 0.466071 1:-85284266 MsG0180004989.01.T01:three_prime_UTR
CATTCCTTGCTACAGAGCTT+GGG 0.468402 1:-85284339 MsG0180004989.01.T01:three_prime_UTR
ATTGTCTAAATCTGAGAAGT+TGG 0.468518 1:-85285064 MsG0180004989.01.T01:CDS
ACTGCTCAGAGACAGAGTTC+TGG 0.470751 1:-85284508 MsG0180004989.01.T01:three_prime_UTR
TGTTTAAGACCAGGGTTTCA+GGG 0.480013 1:+85286961 None:intergenic
AACAGGTTGCCCTGAAACCC+TGG 0.483820 1:-85286970 MsG0180004989.01.T01:intron
GATACCAGCATGTCCAGCCC+TGG 0.484536 1:+85287415 None:intergenic
GGAAATTTCTGCAGATTAGG+TGG 0.485711 1:-85289808 MsG0180004989.01.T01:intron
CTCATTTGGTTCAGATGGAA+TGG 0.487551 1:-85287472 MsG0180004989.01.T01:intron
AAGATCAGGTACAGGCTCTT+CGG 0.491991 1:-85284571 MsG0180004989.01.T01:three_prime_UTR
TCTCCCAGGGCTGGACATGC+TGG 0.492069 1:-85287419 MsG0180004989.01.T01:CDS
TTTGGCGATTGTTTGGTTGG+GGG 0.492470 1:-85284480 MsG0180004989.01.T01:three_prime_UTR
AATCAGTCAGGGACAAATTG+TGG 0.493670 1:-85284754 MsG0180004989.01.T01:three_prime_UTR
ATGACCATTTACAGATGACT+TGG 0.494402 1:+85285014 None:intergenic
GAAATTTCTGCAGATTAGGT+GGG 0.494691 1:-85289807 MsG0180004989.01.T01:intron
GATCATGCAGCTGCTATACA+TGG 0.499932 1:-85288623 MsG0180004989.01.T01:CDS
AATCACCTTGAGATTGTGGT+TGG 0.503457 1:+85287447 None:intergenic
CCGGTGGACTGGAAAATCTT+GGG 0.503646 1:+85285127 None:intergenic
GTCTGCTCAGGAGTGATTGA+TGG 0.504816 1:-85286148 MsG0180004989.01.T01:CDS
ACTAAATCACCTTGAGATTG+TGG 0.509422 1:+85287443 None:intergenic
GGTATAGCAATGAGGTATGC+AGG 0.512573 1:-85286087 MsG0180004989.01.T01:CDS
TATTCTTGGTGGCAGTTCAA+GGG 0.512969 1:-85289771 MsG0180004989.01.T01:CDS
GCATGATCATATCTAGGAGC+TGG 0.514015 1:+85288638 None:intergenic
ATCAGTCAGGGACAAATTGT+GGG 0.515915 1:-85284753 MsG0180004989.01.T01:three_prime_UTR
GACAAAACACATACAATCAT+GGG 0.517618 1:+85290709 None:intergenic
AGGGCCGAAAATTCTAAGCT+TGG 0.518467 1:-85284914 MsG0180004989.01.T01:CDS
AATTTGTCCCTGACTGATTG+GGG 0.519360 1:+85284758 None:intergenic
GCCGAAAATTCTAAGCTTGG+AGG 0.520505 1:-85284911 MsG0180004989.01.T01:CDS
TTGTAGCGGCGGGGAAGGGT+TGG 0.520821 1:-85289072 MsG0180004989.01.T01:intron
GATGAAAACTGGTTCATAGT+TGG 0.525260 1:-85287386 MsG0180004989.01.T01:CDS
AAAGTTGCAGTCCATCAAGT+TGG 0.528372 1:+85284275 None:intergenic
TCGATCTTGAAAGTATGACT+TGG 0.528585 1:-85288778 MsG0180004989.01.T01:CDS
GTAATTACCTCACTGGAAAG+TGG 0.528687 1:+85286891 None:intergenic
CAGGGTCTTAGTGTCTGCTC+AGG 0.530675 1:-85286160 MsG0180004989.01.T01:CDS
TATAGCGAGCAGGTGGGCGG+CGG 0.536344 1:+85290456 None:intergenic
AAATAAACCTTATAGCGAGC+AGG 0.536488 1:+85290446 None:intergenic
GCAGAAAGTAATTACCTCAC+TGG 0.537653 1:+85286884 None:intergenic
ATCACCTTGAGATTGTGGTT+GGG 0.539244 1:+85287448 None:intergenic
GTCTGTGGAAGATCAGGTAC+AGG 0.541261 1:-85284579 MsG0180004989.01.T01:three_prime_UTR
TGTGGGACAGTCTGCAACAC+TGG 0.541663 1:-85288870 MsG0180004989.01.T01:CDS
CGATCTTGAAAGTATGACTT+GGG 0.542678 1:-85288777 MsG0180004989.01.T01:CDS
AGATAATGGCAACAGTTCAC+AGG 0.549134 1:-85289993 MsG0180004989.01.T01:CDS
TTGCTGGTGAAGATAGGAGA+AGG 0.550729 1:-85288826 MsG0180004989.01.T01:CDS
GATTTAGTATCTCCCAGGGC+TGG 0.552233 1:-85287428 MsG0180004989.01.T01:CDS
ACCCTTGTAGCGGCGGGGAA+GGG 0.554512 1:-85289076 MsG0180004989.01.T01:intron
TCCTTGCTACAGAGCTTGGG+TGG 0.554552 1:-85284336 MsG0180004989.01.T01:three_prime_UTR
AAGGTGATTTAGTATCTCCC+AGG 0.560391 1:-85287433 MsG0180004989.01.T01:CDS
TAAACCTTATAGCGAGCAGG+TGG 0.560664 1:+85290449 None:intergenic
TACCATATTGTGACCAGATG+TGG 0.565247 1:+85289958 None:intergenic
ATAGCCTGAAGTGACAATCA+AGG 0.566294 1:-85290594 MsG0180004989.01.T01:intron
GTTTCGACATGTTTAAGACC+AGG 0.574500 1:+85286952 None:intergenic
CAGGAATACTTGTTACAGTA+CGG 0.576983 1:+85290567 None:intergenic
TACTTTCAAGATCGAGAACA+TGG 0.582402 1:+85288786 None:intergenic
TTTCGACATGTTTAAGACCA+GGG 0.583422 1:+85286953 None:intergenic
GAGAAACTACTTATTCTTGG+TGG 0.583851 1:-85289782 MsG0180004989.01.T01:CDS
AAATTTCTGCAGATTAGGTG+GGG 0.587248 1:-85289806 MsG0180004989.01.T01:intron
ATACCAGCATGTCCAGCCCT+GGG 0.596393 1:+85287416 None:intergenic
ACCACCCAAGCTCTGTAGCA+AGG 0.597303 1:+85284335 None:intergenic
GTGTTGCAGACTGTCCCACA+CGG 0.598021 1:+85288873 None:intergenic
AATTTCTGCAGATTAGGTGG+GGG 0.598354 1:-85289805 MsG0180004989.01.T01:intron
GCTCAGAGACAGAGTTCTGG+TGG 0.599061 1:-85284505 MsG0180004989.01.T01:three_prime_UTR
TCAGGAACCCCAATCAGTCA+GGG 0.610841 1:-85284765 MsG0180004989.01.T01:intron
GATCAAGATGCTTTAACTGG+AGG 0.611554 1:-85284727 MsG0180004989.01.T01:intron
ATTGTCAATTACAGAAGTCA+GGG 0.616808 1:-85284933 MsG0180004989.01.T01:CDS
AGAAGAAACAGAAGCTGCAG+CGG 0.617597 1:+85285095 None:intergenic
AACTGGTTCATAGTTGGTGG+TGG 0.617870 1:-85287380 MsG0180004989.01.T01:CDS
TCGGTGGAAGTCGTAATGGT+CGG 0.620312 1:-85290165 MsG0180004989.01.T01:CDS
ATATTGTGACCAGATGTGGC+AGG 0.620813 1:+85289962 None:intergenic
GGACAGTCTGCAACACTGGT+TGG 0.620957 1:-85288866 MsG0180004989.01.T01:CDS
ATTTCTGCAGATTAGGTGGG+GGG 0.621981 1:-85289804 MsG0180004989.01.T01:intron
TGATCATATCTAGGAGCTGG+AGG 0.627693 1:+85288641 None:intergenic
TGGTCCCAACCACAATCTCA+AGG 0.633536 1:-85287452 MsG0180004989.01.T01:CDS
CCTTATAGCGAGCAGGTGGG+CGG 0.634339 1:+85290453 None:intergenic
TGACCATTTACAGATGACTT+GGG 0.634603 1:+85285015 None:intergenic
GATAAAGGATGTAAACAGAA+CGG 0.643520 1:+85289043 None:intergenic
TTGACTTCAGAAGTTTGACG+TGG 0.660815 1:-85290048 MsG0180004989.01.T01:intron
AAAAGATCCACTTTCCAGTG+AGG 0.661113 1:-85286898 MsG0180004989.01.T01:intron
GAAAACTGGTTCATAGTTGG+TGG 0.661936 1:-85287383 MsG0180004989.01.T01:CDS
GCTGGAATCAATGCAGTCTG+TGG 0.665830 1:-85284594 MsG0180004989.01.T01:three_prime_UTR
CAATGGGAGGTATAGCAATG+AGG 0.666121 1:-85286095 MsG0180004989.01.T01:CDS
AGGTGATTTAGTATCTCCCA+GGG 0.668848 1:-85287432 MsG0180004989.01.T01:CDS
CAGCTGCTATACATGGAGAA+CGG 0.673496 1:-85288616 MsG0180004989.01.T01:CDS
TACTCATGCTGAATTGACCA+AGG 0.673545 1:-85284867 MsG0180004989.01.T01:intron
TGTTGCAGACTGTCCCACAC+GGG 0.680353 1:+85288874 None:intergenic
AATTAACCCTTGTAGCGGCG+GGG 0.701490 1:-85289081 MsG0180004989.01.T01:intron
AAACCTTATAGCGAGCAGGT+GGG 0.714483 1:+85290450 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATTATAATATATATAT+GGG + Chr1:85285280-85285261 None:intergenic 0.0%
!! ATTATAATATATATATATAT+GGG - Chr1:85285265-85285284 MsG0180004989.01.T01:intron 0.0%
!! TATATATTATAATATATATA+TGG + Chr1:85285279-85285260 None:intergenic 0.0%
!! TATTATAATATATATATATA+TGG - Chr1:85285264-85285283 MsG0180004989.01.T01:intron 0.0%
!! ATATATATATATATATGCAA+GGG - Chr1:85288213-85288232 MsG0180004989.01.T01:intron 10.0%
!! TATATATATATATATATGCA+AGG - Chr1:85288212-85288231 MsG0180004989.01.T01:intron 10.0%
!!! AAATAATTTTATTCAATAAC+AGG + Chr1:85288098-85288117 None:intergenic 10.0%
!!! TCTTTTTGAATTATATTTTT+AGG - Chr1:85285884-85285903 MsG0180004989.01.T01:intron 10.0%
!!! TTTTGATTTATTTTGATATT+TGG - Chr1:85285067-85285086 MsG0180004989.01.T01:CDS 10.0%
!!! TTTTTTTTTTTTTTTGACAA+TGG - Chr1:85288936-85288955 MsG0180004989.01.T01:intron 10.0%
!! AATTAACAAACAAAAAATCT+TGG + Chr1:85290659-85290678 None:intergenic 15.0%
!! ACTAAATAACATAAAACATT+TGG + Chr1:85290523-85290542 None:intergenic 15.0%
!! ATATATAAATCAATATGCAA+AGG + Chr1:85288694-85288713 None:intergenic 15.0%
!! CAATATACATACTAATATAA+TGG + Chr1:85290731-85290750 None:intergenic 15.0%
!! TATATAAATCAATATGCAAA+GGG + Chr1:85288693-85288712 None:intergenic 15.0%
!! TATATATATATATATGCAAG+GGG - Chr1:85288214-85288233 MsG0180004989.01.T01:intron 15.0%
!! TTATTGAATTCAAGTAAATT+AGG - Chr1:85289028-85289047 MsG0180004989.01.T01:intron 15.0%
!!! AAAAATTAAGAGTATGATAT+TGG + Chr1:85285746-85285765 None:intergenic 15.0%
!!! ATTAAATCAAAGTACTAATA+AGG - Chr1:85286413-85286432 MsG0180004989.01.T01:intron 15.0%
!!! ATTCTTTTTATTATGATAGA+TGG - Chr1:85288904-85288923 MsG0180004989.01.T01:intron 15.0%
!!! TGATGAAAATTATACATTTT+CGG - Chr1:85284712-85284731 MsG0180004989.01.T01:intron 15.0%
!!! TGTTAATTCGTAATTTTAAT+AGG - Chr1:85290671-85290690 MsG0180004989.01.T01:intron 15.0%
!!! TTATGTTTTTATTAATATGG+AGG - Chr1:85288047-85288066 MsG0180004989.01.T01:intron 15.0%
!! AAAATAAATCAAAATCCAGA+TGG + Chr1:85285061-85285080 None:intergenic 20.0%
!! AACTATCCATTAAAAAATGT+GGG - Chr1:85285942-85285961 MsG0180004989.01.T01:intron 20.0%
!! AAGAACTTACATATGATAAT+TGG - Chr1:85284397-85284416 MsG0180004989.01.T01:three_prime_UTR 20.0%
!! ACACACACATATATATATAT+AGG + Chr1:85285470-85285489 None:intergenic 20.0%
!! ACTTCAAGCTATAAAATTAA+TGG + Chr1:85285687-85285706 None:intergenic 20.0%
!! AGAACTTACATATGATAATT+GGG - Chr1:85284398-85284417 MsG0180004989.01.T01:three_prime_UTR 20.0%
!! ATATATATATATATGCAAGG+GGG - Chr1:85288215-85288234 MsG0180004989.01.T01:intron 20.0%
!! ATTTCCTTTACAAACTAAAT+TGG + Chr1:85289072-85289091 None:intergenic 20.0%
!! CAATTACAAAATTAAAACGA+AGG - Chr1:85284523-85284542 MsG0180004989.01.T01:three_prime_UTR 20.0%
!! CACACACATATATATATATA+GGG + Chr1:85285469-85285488 None:intergenic 20.0%
!! CCTGAAAATACATATTTAAA+CGG + Chr1:85290116-85290135 None:intergenic 20.0%
!! CTAATAAAATAAGAAAGAGA+AGG + Chr1:85284490-85284509 None:intergenic 20.0%
!! TAAACTTCAAACTTCAAATT+AGG - Chr1:85287283-85287302 MsG0180004989.01.T01:intron 20.0%
!! TATATATCATGCAAATTGAT+TGG - Chr1:85289521-85289540 MsG0180004989.01.T01:intron 20.0%
!! TTATGGTTCATTTAGAAATA+AGG + Chr1:85287787-85287806 None:intergenic 20.0%
!! TTTATAGATACTAACCTTTA+AGG + Chr1:85285163-85285182 None:intergenic 20.0%
!!! AAAAAGAAAAAGTACGATAA+AGG + Chr1:85285871-85285890 None:intergenic 20.0%
!!! AAAACAACTTTTAAGATCAA+CGG + Chr1:85287354-85287373 None:intergenic 20.0%
!!! AAGTTGATAATCAATCAAAA+TGG - Chr1:85288608-85288627 MsG0180004989.01.T01:CDS 20.0%
!!! AATGTTTAGTCTATTTTTCT+AGG - Chr1:85285996-85286015 MsG0180004989.01.T01:intron 20.0%
!!! AGTTGATAATCAATCAAAAT+GGG - Chr1:85288609-85288628 MsG0180004989.01.T01:CDS 20.0%
!!! CAATGAAACTATGTTTTTTA+TGG - Chr1:85287880-85287899 MsG0180004989.01.T01:intron 20.0%
!!! CTTTCTTATTTTATTAGAGA+TGG - Chr1:85284493-85284512 MsG0180004989.01.T01:three_prime_UTR 20.0%
!!! GTTTTAAATACTACTTTCTT+TGG - Chr1:85285003-85285022 MsG0180004989.01.T01:CDS 20.0%
!!! TTTGAAGTTTGAAGTTTAAA+AGG + Chr1:85287281-85287300 None:intergenic 20.0%
!!! TTTTAATAGGTTACTTTTGT+CGG - Chr1:85290684-85290703 MsG0180004989.01.T01:intron 20.0%
! AATAAACTTCTTACAAGGAA+GGG - Chr1:85287805-85287824 MsG0180004989.01.T01:intron 25.0%
! AATCAAAAGATCTCAAATGT+GGG + Chr1:85288258-85288277 None:intergenic 25.0%
! ACACCTTCATAAAAATTAGT+TGG - Chr1:85285376-85285395 MsG0180004989.01.T01:intron 25.0%
! ACCATAATAAACTTCTTACA+AGG - Chr1:85287800-85287819 MsG0180004989.01.T01:intron 25.0%
! AGAAAAAACTACTTTGTGTA+GGG + Chr1:85286514-85286533 None:intergenic 25.0%
! AGAAATCAATTTGTCATTCT+TGG - Chr1:85284604-85284623 MsG0180004989.01.T01:three_prime_UTR 25.0%
! AGCAAAGTATAACTAAAAAG+TGG + Chr1:85285351-85285370 None:intergenic 25.0%
! ATAAATCCTTTAAATCTACC+AGG + Chr1:85288431-85288450 None:intergenic 25.0%
! ATGTTTCATTGGAAACATAA+TGG - Chr1:85287191-85287210 MsG0180004989.01.T01:intron 25.0%
! CAACTATCCATTAAAAAATG+TGG - Chr1:85285941-85285960 MsG0180004989.01.T01:intron 25.0%
! CTATGGATTTATAGTTGTTT+AGG - Chr1:85290223-85290242 MsG0180004989.01.T01:intron 25.0%
! TAAAAGATTCACCTTCTAAA+AGG - Chr1:85285428-85285447 MsG0180004989.01.T01:intron 25.0%
! TAAAGAAGAAAAGAGGTTAT+TGG - Chr1:85289939-85289958 MsG0180004989.01.T01:intron 25.0%
! TAATAAACTTCTTACAAGGA+AGG - Chr1:85287804-85287823 MsG0180004989.01.T01:intron 25.0%
! TAATCAAAAGATCTCAAATG+TGG + Chr1:85288259-85288278 None:intergenic 25.0%
! TAGCAAGTTATAAGAAGTTA+AGG + Chr1:85288589-85288608 None:intergenic 25.0%
! TCCTTGTAAGAAGTTTATTA+TGG + Chr1:85287804-85287823 None:intergenic 25.0%
! TCTTTGTAATAGTCAATGTT+GGG - Chr1:85289208-85289227 MsG0180004989.01.T01:intron 25.0%
! TGACTATTACAAAGAATAAC+CGG + Chr1:85289203-85289222 None:intergenic 25.0%
! TTCAAATATCAGCATATGAA+AGG + Chr1:85287164-85287183 None:intergenic 25.0%
! TTCTTTGTAATAGTCAATGT+TGG - Chr1:85289207-85289226 MsG0180004989.01.T01:intron 25.0%
!! AATTTTTCTTACTGAAAACC+TGG - Chr1:85285759-85285778 MsG0180004989.01.T01:intron 25.0%
!! ACACCAACTAATTTTTATGA+AGG + Chr1:85285382-85285401 None:intergenic 25.0%
!! AGATCTCTAAAGATAATAGT+TGG + Chr1:85287141-85287160 None:intergenic 25.0%
!! CAAAAGGTTAAAAAAAGTGT+AGG + Chr1:85287115-85287134 None:intergenic 25.0%
!! CCGTTTAAATATGTATTTTC+AGG - Chr1:85290113-85290132 MsG0180004989.01.T01:intron 25.0%
!! CTATTTGTGTTTGTTAACAT+TGG - Chr1:85289121-85289140 MsG0180004989.01.T01:intron 25.0%
!! TAGTTTGTAAAGGAAATCAT+TGG - Chr1:85289075-85289094 MsG0180004989.01.T01:intron 25.0%
!! TGAAAATTATACATTTTCGG+TGG - Chr1:85284715-85284734 MsG0180004989.01.T01:intron 25.0%
!! TTCTAAAAATGCACATAAAG+TGG + Chr1:85287623-85287642 None:intergenic 25.0%
!! TTGATAATCAATCAAAATGG+GGG - Chr1:85288611-85288630 MsG0180004989.01.T01:CDS 25.0%
!! TTTTATTCAATAACAGGTCT+TGG + Chr1:85288092-85288111 None:intergenic 25.0%
!!! AAAAAACCACTTTTGTGTAT+GGG + Chr1:85286545-85286564 None:intergenic 25.0%
!!! CACATTTTTTAATGGATAGT+TGG + Chr1:85285943-85285962 None:intergenic 25.0%
!!! CATGAAAAATGCTTTAGTTT+TGG - Chr1:85287328-85287347 MsG0180004989.01.T01:intron 25.0%
!!! GATTATCTGATTTTTGAAAC+AGG - Chr1:85287909-85287928 MsG0180004989.01.T01:intron 25.0%
!!! GTTGATAATCAATCAAAATG+GGG - Chr1:85288610-85288629 MsG0180004989.01.T01:CDS 25.0%
!!! TAAAAAACCACTTTTGTGTA+TGG + Chr1:85286546-85286565 None:intergenic 25.0%
!!! TAAAGCATTAACACATTTTC+TGG + Chr1:85286185-85286204 None:intergenic 25.0%
!!! TTTAATAGGTTACTTTTGTC+GGG - Chr1:85290685-85290704 MsG0180004989.01.T01:intron 25.0%
!!! TTTTTGGAGTTCTGTAATTT+TGG + Chr1:85290280-85290299 None:intergenic 25.0%
!!! TTTTTTTTTGACAATGGAGA+TGG - Chr1:85288942-85288961 MsG0180004989.01.T01:intron 25.0%
AAAAAGGACTGTAGAATTCA+AGG - Chr1:85286607-85286626 MsG0180004989.01.T01:intron 30.0%
AAAGTTCCTGGTAGATTTAA+AGG - Chr1:85288422-85288441 MsG0180004989.01.T01:intron 30.0%
AAATCCAATCCAAAATGCAA+CGG + Chr1:85288340-85288359 None:intergenic 30.0%
AAATTAATGGTCACACTTAC+CGG + Chr1:85285674-85285693 None:intergenic 30.0%
AATTGTCAATTACAGAAGTC+AGG - Chr1:85289962-85289981 MsG0180004989.01.T01:CDS 30.0%
ACATGTAATTCATGATTGGT+TGG - Chr1:85284549-85284568 MsG0180004989.01.T01:three_prime_UTR 30.0%
ACTGTGATTAAGATTAGGAT+TGG - Chr1:85289425-85289444 MsG0180004989.01.T01:intron 30.0%
AGACAAAACACATACAATCA+TGG + Chr1:85284191-85284210 None:intergenic 30.0%
AGATGTATCTTCTACAACTT+CGG + Chr1:85288308-85288327 None:intergenic 30.0%
AGATTAAGAGTGAAGATATC+CGG - Chr1:85289331-85289350 MsG0180004989.01.T01:intron 30.0%
AGCGATAATATGAAAGAAGT+AGG - Chr1:85288562-85288581 MsG0180004989.01.T01:CDS 30.0%
ATAAACTTCTTACAAGGAAG+GGG - Chr1:85287806-85287825 MsG0180004989.01.T01:intron 30.0%
ATAACTATAGGAATCTGAGT+TGG - Chr1:85286659-85286678 MsG0180004989.01.T01:intron 30.0%
ATTGTCAATTACAGAAGTCA+GGG - Chr1:85289963-85289982 MsG0180004989.01.T01:CDS 30.0%
ATTGTCTAAATCTGAGAAGT+TGG - Chr1:85289832-85289851 MsG0180004989.01.T01:intron 30.0%
CAGAAAAAACTACTTTGTGT+AGG + Chr1:85286515-85286534 None:intergenic 30.0%
CATTGGAAACATAATGGTTA+TGG - Chr1:85287197-85287216 MsG0180004989.01.T01:intron 30.0%
CCATAGTTAACTTTCAAAGA+TGG + Chr1:85290209-85290228 None:intergenic 30.0%
CCTATCAAAATTCAAGAAAG+TGG + Chr1:85286229-85286248 None:intergenic 30.0%
CTCAATCCAAATATATCAGA+GGG - Chr1:85287752-85287771 MsG0180004989.01.T01:intron 30.0%
GAAAAAACTACTTTGTGTAG+GGG + Chr1:85286513-85286532 None:intergenic 30.0%
GAAGTCTTAATAACTCAAAC+TGG + Chr1:85285641-85285660 None:intergenic 30.0%
GACAAAACACATACAATCAT+GGG + Chr1:85284190-85284209 None:intergenic 30.0%
GATAAAGGATGTAAACAGAA+CGG + Chr1:85285856-85285875 None:intergenic 30.0%
GCATACATGTAATTCATGAT+TGG - Chr1:85284545-85284564 MsG0180004989.01.T01:three_prime_UTR 30.0%
GCATCAATTATTATCCACAT+AGG - Chr1:85289472-85289491 MsG0180004989.01.T01:intron 30.0%
GGATAATAATTGATGCTACT+GGG + Chr1:85289468-85289487 None:intergenic 30.0%
GTATCACTATTGATGAAAAC+TGG - Chr1:85287499-85287518 MsG0180004989.01.T01:intron 30.0%
TACATGATTTAGTTGTTTGC+AGG - Chr1:85284822-85284841 MsG0180004989.01.T01:intron 30.0%
TATATCATTTCGTCATCGAT+TGG - Chr1:85287039-85287058 MsG0180004989.01.T01:intron 30.0%
TCAAGAGTTATATTGTTTGC+TGG - Chr1:85286054-85286073 MsG0180004989.01.T01:intron 30.0%
TCATATGCTGATATTTGAAG+TGG - Chr1:85287165-85287184 MsG0180004989.01.T01:intron 30.0%
TGAAAACTCACAATGTTCAT+TGG - Chr1:85285579-85285598 MsG0180004989.01.T01:intron 30.0%
TGGATAATAATTGATGCTAC+TGG + Chr1:85289469-85289488 None:intergenic 30.0%
TTAGCACTGTGATTAAGATT+AGG - Chr1:85289420-85289439 MsG0180004989.01.T01:intron 30.0%
TTTGGAAATTTCTGCAGATT+AGG - Chr1:85285085-85285104 MsG0180004989.01.T01:CDS 30.0%
! AAAAAACCTTTCTTAGCCTT+GGG - Chr1:85284636-85284655 MsG0180004989.01.T01:intron 30.0%
! AATGCCACTAAAAGTGATTT+TGG - Chr1:85290461-85290480 MsG0180004989.01.T01:CDS 30.0%
! ATATCATTTCGTCATCGATT+GGG - Chr1:85287040-85287059 MsG0180004989.01.T01:intron 30.0%
! CATGTAATTCATGATTGGTT+GGG - Chr1:85284550-85284569 MsG0180004989.01.T01:three_prime_UTR 30.0%
! CCATCTTTGAAAGTTAACTA+TGG - Chr1:85290206-85290225 MsG0180004989.01.T01:intron 30.0%
! CTTTGAAGATGAAAATAGAC+AGG - Chr1:85288537-85288556 MsG0180004989.01.T01:intron 30.0%
! GAAACATATCTGTTTGCTTT+TGG - Chr1:85288772-85288791 MsG0180004989.01.T01:CDS 30.0%
! GAAGCATTAAAGAAGAAAAG+AGG - Chr1:85289932-85289951 MsG0180004989.01.T01:intron 30.0%
! GTTTGAGTTATTAAGACTTC+TGG - Chr1:85285641-85285660 MsG0180004989.01.T01:intron 30.0%
! TAAACATGTCGAAACTTGTT+TGG - Chr1:85287952-85287971 MsG0180004989.01.T01:intron 30.0%
! TAAGTTTTCCTTGCTTATCA+GGG - Chr1:85288718-85288737 MsG0180004989.01.T01:intron 30.0%
! TGTTTAGGATTTAAGCATAC+AGG - Chr1:85290238-85290257 MsG0180004989.01.T01:intron 30.0%
! TTGTGTTTAAAGTTTCACAC+AGG + Chr1:85287677-85287696 None:intergenic 30.0%
!! AACTCCAAAATCACTTTTAG+TGG + Chr1:85290468-85290487 None:intergenic 30.0%
!! AGATAATAGTTGGTGTCAAA+AGG + Chr1:85287131-85287150 None:intergenic 30.0%
!! ATAAGGTTGTTTCTTCTATC+TGG - Chr1:85286430-85286449 MsG0180004989.01.T01:intron 30.0%
!! CCACTTTCTTGAATTTTGAT+AGG - Chr1:85286226-85286245 MsG0180004989.01.T01:intron 30.0%
!! GAGTCCAATTTAGTTTGTAA+AGG - Chr1:85289065-85289084 MsG0180004989.01.T01:CDS 30.0%
!! GTTTTGCTTTTGTGGAAATT+AGG + Chr1:85289248-85289267 None:intergenic 30.0%
!! TAAGGTTGTTTCTTCTATCT+GGG - Chr1:85286431-85286450 MsG0180004989.01.T01:intron 30.0%
!! TGAGATTTTGACAACACAAA+TGG + Chr1:85288878-85288897 None:intergenic 30.0%
!!! ATGACTCCCACATTTTTTAA+TGG + Chr1:85285951-85285970 None:intergenic 30.0%
!!! GTGATTTTGGAGTTTATTCT+TGG - Chr1:85290474-85290493 MsG0180004989.01.T01:CDS 30.0%
!!! GTGTGTTTTTTGTTTGGTTA+TGG - Chr1:85285717-85285736 MsG0180004989.01.T01:intron 30.0%
!!! TTTTTTGTTTTTGAGACCCA+AGG - Chr1:85289728-85289747 MsG0180004989.01.T01:intron 30.0%
AAAAGCAAAACCTAGTGTTG+TGG - Chr1:85289257-85289276 MsG0180004989.01.T01:CDS 35.0%
AAAGGAGAATCAGAGAGAAA+TGG - Chr1:85284356-85284375 MsG0180004989.01.T01:three_prime_UTR 35.0%
AAATAAACCTTATAGCGAGC+AGG + Chr1:85284453-85284472 None:intergenic 35.0%
AAATTTCTGCAGATTAGGTG+GGG - Chr1:85285090-85285109 MsG0180004989.01.T01:CDS 35.0%
AACAAAAAACACACCAAGGA+TGG + Chr1:85285711-85285730 None:intergenic 35.0%
AACAAGTATTCCTGGACAAA+AGG - Chr1:85284338-85284357 MsG0180004989.01.T01:three_prime_UTR 35.0%
AACTTCGGTAATGACTAATG+AGG + Chr1:85288293-85288312 None:intergenic 35.0%
AAGACTAAATGACAACTGAG+GGG + Chr1:85286973-85286992 None:intergenic 35.0%
ACCAAACAAAAAACACACCA+AGG + Chr1:85285715-85285734 None:intergenic 35.0%
ACTAAATCACCTTGAGATTG+TGG + Chr1:85287456-85287475 None:intergenic 35.0%
ACTTCGGTAATGACTAATGA+GGG + Chr1:85288292-85288311 None:intergenic 35.0%
AGAAAGAGAAGGAGAAAGAT+AGG + Chr1:85284479-85284498 None:intergenic 35.0%
AGAGATCAAGATGCTTTAAC+TGG - Chr1:85290166-85290185 MsG0180004989.01.T01:CDS 35.0%
AGCAACCACCAAAAATCATA+AGG + Chr1:85286308-85286327 None:intergenic 35.0%
ATGACCATTTACAGATGACT+TGG + Chr1:85289885-85289904 None:intergenic 35.0%
ATGGAGATGGATGAAATACT+TGG - Chr1:85288955-85288974 MsG0180004989.01.T01:intron 35.0%
ATTACCTTTGCAACTTGACT+TGG - Chr1:85289146-85289165 MsG0180004989.01.T01:intron 35.0%
ATTGCTAAAAGACACCTTCA+TGG + Chr1:85285307-85285326 None:intergenic 35.0%
ATTGGGTACATTACTGTAAC+TGG - Chr1:85284415-85284434 MsG0180004989.01.T01:three_prime_UTR 35.0%
CAAAAAACCTTTCTTAGCCT+TGG - Chr1:85284635-85284654 MsG0180004989.01.T01:intron 35.0%
CAAGACTAAATGACAACTGA+GGG + Chr1:85286974-85286993 None:intergenic 35.0%
CATGAATCAATAAACCCCAT+TGG + Chr1:85285794-85285813 None:intergenic 35.0%
CATGTAATTAACCCTTGTAG+CGG - Chr1:85285810-85285829 MsG0180004989.01.T01:intron 35.0%
CTAAAGCTAAAAGCTGATAC+TGG - Chr1:85284877-85284896 MsG0180004989.01.T01:exon 35.0%
CTGATATATTTGGATTGAGC+AGG + Chr1:85287751-85287770 None:intergenic 35.0%
CTTGTTTGATGCATTATGAC+CGG + Chr1:85289353-85289372 None:intergenic 35.0%
GAAAGAGAAGGAGAAAGATA+GGG + Chr1:85284478-85284497 None:intergenic 35.0%
GAAATTTCTGCAGATTAGGT+GGG - Chr1:85285089-85285108 MsG0180004989.01.T01:CDS 35.0%
GAATCTCATTCCAATCATCT+TGG - Chr1:85288361-85288380 MsG0180004989.01.T01:intron 35.0%
GAGAAACTACTTATTCTTGG+TGG - Chr1:85285114-85285133 MsG0180004989.01.T01:CDS 35.0%
GAGAAATGGAAGTCAACAAT+TGG - Chr1:85284370-85284389 MsG0180004989.01.T01:three_prime_UTR 35.0%
GATGATCTGACAATCTCATT+TGG - Chr1:85287410-85287429 MsG0180004989.01.T01:CDS 35.0%
GCTCAATCCAAATATATCAG+AGG - Chr1:85287751-85287770 MsG0180004989.01.T01:intron 35.0%
GCTGATACTGGAAAAGATAA+TGG - Chr1:85284889-85284908 MsG0180004989.01.T01:exon 35.0%
GGTGAAAAAGAAGATTGTGA+GGG - Chr1:85290437-85290456 MsG0180004989.01.T01:intron 35.0%
TACAGAACTCCAAAAATTGC+TGG - Chr1:85290284-85290303 MsG0180004989.01.T01:intron 35.0%
TACTGAAAACCTGGTTTACA+AGG - Chr1:85285768-85285787 MsG0180004989.01.T01:intron 35.0%
TACTTTCAAGATCGAGAACA+TGG + Chr1:85286113-85286132 None:intergenic 35.0%
TCAAGTCGTAATACATACCT+TGG + Chr1:85290049-85290068 None:intergenic 35.0%
TCACAGTTTGCAAGTCTAAT+AGG + Chr1:85286359-85286378 None:intergenic 35.0%
TGAAGTGGAACATGTTTCAT+TGG - Chr1:85287180-85287199 MsG0180004989.01.T01:intron 35.0%
TGACCATTTACAGATGACTT+GGG + Chr1:85289884-85289903 None:intergenic 35.0%
TGGAATAAGAATATGACCCA+AGG + Chr1:85284655-85284674 None:intergenic 35.0%
TGTTTGAAGACTACATGACT+TGG - Chr1:85286876-85286895 MsG0180004989.01.T01:intron 35.0%
TTATCGGATGTTCAGGTATA+TGG - Chr1:85284757-85284776 MsG0180004989.01.T01:three_prime_UTR 35.0%
TTATGTATGTCACCTGTACA+CGG - Chr1:85286469-85286488 MsG0180004989.01.T01:intron 35.0%
TTGCTAAAAGACACCTTCAT+GGG + Chr1:85285385-85285366 None:intergenic 35.0%
TTGTCAGATCATCAGATTGT+TGG + Chr1:85287403-85287422 None:intergenic 35.0%
TTGTCTGTACTTTCATTCCA+TGG + Chr1:85287248-85287267 None:intergenic 35.0%
! ACAATCTCATTTGGTTCAGA+TGG - Chr1:85287419-85287438 MsG0180004989.01.T01:CDS 35.0%
! ACCTCCAAGCTTAGAATTTT+CGG + Chr1:85289989-85290008 None:intergenic 35.0%
! ACTATGGACTGTGTGAAATT+AGG - Chr1:85289704-85289723 MsG0180004989.01.T01:intron 35.0%
! CAGGAATACTTGTTACAGTA+CGG + Chr1:85284332-85284351 None:intergenic 35.0%
! CGATCTTGAAAGTATGACTT+GGG - Chr1:85286119-85286138 MsG0180004989.01.T01:CDS 35.0%
! GAACGGTACCTTATGATTTT+TGG - Chr1:85286297-85286316 MsG0180004989.01.T01:intron 35.0%
! GATGAAAACTGGTTCATAGT+TGG - Chr1:85287510-85287529 MsG0180004989.01.T01:intron 35.0%
! GTAAGTTTTCCTTGCTTATC+AGG - Chr1:85288717-85288736 MsG0180004989.01.T01:intron 35.0%
! TATTGTTTGCTGGTGAAGAT+AGG - Chr1:85286064-85286083 MsG0180004989.01.T01:CDS 35.0%
! TCGATCTTGAAAGTATGACT+TGG - Chr1:85286118-85286137 MsG0180004989.01.T01:CDS 35.0%
! TTATCCAAGTCAAGTTGCAA+AGG + Chr1:85289153-85289172 None:intergenic 35.0%
! TTTCGACATGTTTAAGACCA+GGG + Chr1:85287946-85287965 None:intergenic 35.0%
!! AACACTAGGTTTTGCTTTTG+TGG + Chr1:85289256-85289275 None:intergenic 35.0%
!! AAGGTTGTTTCTTCTATCTG+GGG - Chr1:85286432-85286451 MsG0180004989.01.T01:intron 35.0%
!! ACATATCTGTTTGCTTTTGG+TGG - Chr1:85288775-85288794 MsG0180004989.01.T01:CDS 35.0%
!! AGATTAGTTCCGTTGCATTT+TGG - Chr1:85288328-85288347 MsG0180004989.01.T01:intron 35.0%
!! ATTTTGATCTCCACAACACT+AGG + Chr1:85289270-85289289 None:intergenic 35.0%
!!! ATACAGGTAAGTTTTGTTCC+AGG - Chr1:85290254-85290273 MsG0180004989.01.T01:intron 35.0%
!!! CTTGACTTGGATAATTTTCC+TGG - Chr1:85289159-85289178 MsG0180004989.01.T01:intron 35.0%
!!! GCATTGATTCCAGCAATTTT+TGG + Chr1:85290296-85290315 None:intergenic 35.0%
!!! TCCTTGGTGTGTTTTTTGTT+TGG - Chr1:85285711-85285730 MsG0180004989.01.T01:intron 35.0%
AAAAATGACTCCCTCTGTGT+AGG - Chr1:85287722-85287741 MsG0180004989.01.T01:intron 40.0%
AAAACTACTTTGTGTAGGGG+TGG + Chr1:85286510-85286529 None:intergenic 40.0%
AAAAGATCCACTTTCCAGTG+AGG - Chr1:85287998-85288017 MsG0180004989.01.T01:intron 40.0%
AAAGTGGAAATCACACCTTG+AGG + Chr1:85285335-85285354 None:intergenic 40.0%
AAAGTTGCAGTCCATCAAGT+TGG + Chr1:85290624-85290643 None:intergenic 40.0%
AAGGTGATTTAGTATCTCCC+AGG - Chr1:85287463-85287482 MsG0180004989.01.T01:intron 40.0%
AAGTTTCACACAGGTTGCTA+AGG + Chr1:85287668-85287687 None:intergenic 40.0%
AATAGTACAGACTCTTCGCA+GGG + Chr1:85286855-85286874 None:intergenic 40.0%
AATCACCTTGAGATTGTGGT+TGG + Chr1:85287452-85287471 None:intergenic 40.0%
AATCAGTCAGGGACAAATTG+TGG - Chr1:85290142-85290161 MsG0180004989.01.T01:intron 40.0%
AATGTTGTTATGCCTCTCCA+AGG + Chr1:85288506-85288525 None:intergenic 40.0%
AATTTCTGCAGATTAGGTGG+GGG - Chr1:85285091-85285110 MsG0180004989.01.T01:CDS 40.0%
AATTTGTCCCTGACTGATTG+GGG + Chr1:85290141-85290160 None:intergenic 40.0%
ACAATTTGTCCCTGACTGAT+TGG + Chr1:85290143-85290162 None:intergenic 40.0%
ACTCCCAAGTCATCTGTAAA+TGG - Chr1:85289878-85289897 MsG0180004989.01.T01:intron 40.0%
AGACTAAATGACAACTGAGG+GGG + Chr1:85286972-85286991 None:intergenic 40.0%
AGCATGCCAATTGCAATACA+TGG + Chr1:85289587-85289606 None:intergenic 40.0%
AGGAAGCTAGTGAGATACTA+AGG - Chr1:85289492-85289511 MsG0180004989.01.T01:intron 40.0%
AGGCATAACAACATTCCCAA+GGG - Chr1:85288511-85288530 MsG0180004989.01.T01:intron 40.0%
AGGTGATTTAGTATCTCCCA+GGG - Chr1:85287464-85287483 MsG0180004989.01.T01:intron 40.0%
AGTGTACACTCGGAAGAAAA+AGG - Chr1:85286591-85286610 MsG0180004989.01.T01:intron 40.0%
AGTTTGGCGATTGTTTGGTT+GGG - Chr1:85290414-85290433 MsG0180004989.01.T01:intron 40.0%
ATAGCCTGAAGTGACAATCA+AGG - Chr1:85284302-85284321 MsG0180004989.01.T01:three_prime_UTR 40.0%
ATAGCTTGAAGTTCCATCCT+TGG - Chr1:85285695-85285714 MsG0180004989.01.T01:intron 40.0%
ATATGACCCAAGGCTAAGAA+AGG + Chr1:85284645-85284664 None:intergenic 40.0%
ATCACCTTGAGATTGTGGTT+GGG + Chr1:85287451-85287470 None:intergenic 40.0%
ATCAGTCAGGGACAAATTGT+GGG - Chr1:85290143-85290162 MsG0180004989.01.T01:intron 40.0%
ATGTCACCCATACACAAAAG+TGG - Chr1:85286536-85286555 MsG0180004989.01.T01:intron 40.0%
ATGTGGGAGTCATTTGATTG+TGG - Chr1:85285958-85285977 MsG0180004989.01.T01:intron 40.0%
ATGTGGGTCGAAAAAGAAAG+TGG + Chr1:85288242-85288261 None:intergenic 40.0%
ATTCCATGTAGTGGTTTCTG+TGG - Chr1:85289674-85289693 MsG0180004989.01.T01:intron 40.0%
ATTGAACGGAAATGTTGGGA+AGG - Chr1:85286819-85286838 MsG0180004989.01.T01:intron 40.0%
CAATTGCAATACATGGTGTC+AGG + Chr1:85289580-85289599 None:intergenic 40.0%
CAATTTGTCCCTGACTGATT+GGG + Chr1:85290142-85290161 None:intergenic 40.0%
CAGATGGTCACTAAAACTCA+AGG + Chr1:85285045-85285064 None:intergenic 40.0%
CAGGAACTTTGATAGACATG+AGG + Chr1:85288412-85288431 None:intergenic 40.0%
CATCTTATGCCAAAAGAGAC+GGG - Chr1:85286905-85286924 MsG0180004989.01.T01:CDS 40.0%
CCAAGACTAAATGACAACTG+AGG + Chr1:85286975-85286994 None:intergenic 40.0%
CCATTATCCAAGTGTACACT+CGG - Chr1:85286581-85286600 MsG0180004989.01.T01:intron 40.0%
CGAGTGTACACTTGGATAAT+GGG + Chr1:85286583-85286602 None:intergenic 40.0%
CGTACTGTAACAAGTATTCC+TGG - Chr1:85284330-85284349 MsG0180004989.01.T01:three_prime_UTR 40.0%
CGTATGCATTCTGTTATCAC+AGG + Chr1:85286699-85286718 None:intergenic 40.0%
CTATCTTGAAGCGCAATCTA+GGG - Chr1:85287699-85287718 MsG0180004989.01.T01:intron 40.0%
CTCATGTCTATCAAAGTTCC+TGG - Chr1:85288410-85288429 MsG0180004989.01.T01:intron 40.0%
CTGACACCATGTATTGCAAT+TGG - Chr1:85289578-85289597 MsG0180004989.01.T01:intron 40.0%
CTGCAGTGAAAAACAACACA+TGG + Chr1:85284675-85284694 None:intergenic 40.0%
GAAGTTGGATTTCATGCAAC+TGG - Chr1:85289847-85289866 MsG0180004989.01.T01:intron 40.0%
GAATCGAAGTCCAAGATGAT+TGG + Chr1:85288374-85288393 None:intergenic 40.0%
GAGGATTGAACGGAAATGTT+GGG - Chr1:85286815-85286834 MsG0180004989.01.T01:intron 40.0%
GATAGCTACAACTACAAGAC+CGG - Chr1:85289181-85289200 MsG0180004989.01.T01:intron 40.0%
GATCAAGATGCTTTAACTGG+AGG - Chr1:85290169-85290188 MsG0180004989.01.T01:CDS 40.0%
GCAGAAAGTAATTACCTCAC+TGG + Chr1:85288015-85288034 None:intergenic 40.0%
GCATCTTATGCCAAAAGAGA+CGG - Chr1:85286904-85286923 MsG0180004989.01.T01:CDS 40.0%
GCGCATAGCATATTATAGCA+TGG - Chr1:85285546-85285565 MsG0180004989.01.T01:intron 40.0%
GGAAATTTCTGCAGATTAGG+TGG - Chr1:85285088-85285107 MsG0180004989.01.T01:CDS 40.0%
GGACACTTCTGATACCTTAA+AGG - Chr1:85285146-85285165 MsG0180004989.01.T01:CDS 40.0%
GGATGTTCAGGTATATGGTA+TGG - Chr1:85284762-85284781 MsG0180004989.01.T01:three_prime_UTR 40.0%
GGGGAGAAACTACTTATTCT+TGG - Chr1:85285111-85285130 MsG0180004989.01.T01:CDS 40.0%
GGGTGAAAAAGAAGATTGTG+AGG - Chr1:85290436-85290455 MsG0180004989.01.T01:intron 40.0%
GGTTATGGTCTTCATTAACC+TGG - Chr1:85287212-85287231 MsG0180004989.01.T01:intron 40.0%
GTAATTACCTCACTGGAAAG+TGG + Chr1:85288008-85288027 None:intergenic 40.0%
GTGATAACAGAATGCATACG+TGG - Chr1:85286699-85286718 MsG0180004989.01.T01:intron 40.0%
TACCATATTGTGACCAGATG+TGG + Chr1:85284941-85284960 None:intergenic 40.0%
TACTCATGCTGAATTGACCA+AGG - Chr1:85290029-85290048 MsG0180004989.01.T01:CDS 40.0%
TAGAGAGAGAGAGTTTACAG+AGG - Chr1:85286752-85286771 MsG0180004989.01.T01:intron 40.0%
TAGTTATGCTATCGCAGCAA+AGG + Chr1:85286646-85286665 None:intergenic 40.0%
TCATCTTCAAAGTTGCCCTT+GGG + Chr1:85288529-85288548 None:intergenic 40.0%
TCGTAATGGTCGGCATTTAT+CGG - Chr1:85284741-85284760 MsG0180004989.01.T01:three_prime_UTR 40.0%
TCTTGTAGTTGTAGCTATCC+AGG + Chr1:85289180-85289199 None:intergenic 40.0%
TGAGAGACATGAGGATTGAA+CGG - Chr1:85286805-85286824 MsG0180004989.01.T01:intron 40.0%
TGAGGATTGAACGGAAATGT+TGG - Chr1:85286814-85286833 MsG0180004989.01.T01:intron 40.0%
TGCTAAAGAGACACCTTCAT+GGG - Chr1:85285216-85285235 MsG0180004989.01.T01:intron 40.0%
TGCTGCGATAGCATAACTAT+AGG - Chr1:85286647-85286666 MsG0180004989.01.T01:intron 40.0%
TGGACTGCAACTTTCAAAGA+TGG - Chr1:85290630-85290649 MsG0180004989.01.T01:intron 40.0%
TTCATCTTCAAAGTTGCCCT+TGG + Chr1:85288530-85288549 None:intergenic 40.0%
TTGACTTCAGAAGTTTGACG+TGG - Chr1:85284848-85284867 MsG0180004989.01.T01:intron 40.0%
TTGCTAAAGAGACACCTTCA+TGG - Chr1:85285215-85285234 MsG0180004989.01.T01:intron 40.0%
TTGTGGAGATCAAAATGCTG+AGG - Chr1:85289274-85289293 MsG0180004989.01.T01:CDS 40.0%
! ACTATAGGAATCTGAGTTGG+TGG - Chr1:85286662-85286681 MsG0180004989.01.T01:intron 40.0%
! AGATAATGGCAACAGTTCAC+AGG - Chr1:85284903-85284922 MsG0180004989.01.T01:CDS 40.0%
! AGTTCCGTTGCATTTTGGAT+TGG - Chr1:85288333-85288352 MsG0180004989.01.T01:intron 40.0%
! ATCACCTTGATTGTCACTTC+AGG + Chr1:85284309-85284328 None:intergenic 40.0%
! ATGTTTAAGACCAGGGTTTC+AGG + Chr1:85287939-85287958 None:intergenic 40.0%
! ATTTTCGGTGGAAGTCGTAA+TGG - Chr1:85284727-85284746 MsG0180004989.01.T01:intron 40.0%
! CCTCAGTTGTCATTTAGTCT+TGG - Chr1:85286972-85286991 MsG0180004989.01.T01:intron 40.0%
! CTCATTTGGTTCAGATGGAA+TGG - Chr1:85287424-85287443 MsG0180004989.01.T01:CDS 40.0%
! GAAAACTGGTTCATAGTTGG+TGG - Chr1:85287513-85287532 MsG0180004989.01.T01:intron 40.0%
! GCTAGAAGACACCTTTTAGA+AGG + Chr1:85285442-85285461 None:intergenic 40.0%
! GTTTCGACATGTTTAAGACC+AGG + Chr1:85287947-85287966 None:intergenic 40.0%
! TATCTCACTAGCTTCCTATG+TGG + Chr1:85289489-85289508 None:intergenic 40.0%
! TATTCTTGGTGGCAGTTCAA+GGG - Chr1:85285125-85285144 MsG0180004989.01.T01:CDS 40.0%
! TGTTTAAGACCAGGGTTTCA+GGG + Chr1:85287938-85287957 None:intergenic 40.0%
! TTATTCTTGGTGGCAGTTCA+AGG - Chr1:85285124-85285143 MsG0180004989.01.T01:CDS 40.0%
! TTTCTGTGGACTGATGACTA+TGG - Chr1:85289688-85289707 MsG0180004989.01.T01:intron 40.0%
! TTTTAGCAATCCACACCTCA+AGG - Chr1:85285317-85285336 MsG0180004989.01.T01:intron 40.0%
! TTTTCTTCCGAGTGTACACT+TGG + Chr1:85286591-85286610 None:intergenic 40.0%
!! CGGTACCTTATGATTTTTGG+TGG - Chr1:85286300-85286319 MsG0180004989.01.T01:intron 40.0%
!! CTTGAGTTTTAGTGACCATC+TGG - Chr1:85285043-85285062 MsG0180004989.01.T01:CDS 40.0%
!! TAAGACTTCTGGAAGTGTTC+CGG - Chr1:85285652-85285671 MsG0180004989.01.T01:intron 40.0%
!! TTGCTTTTGGTGGCTACAAT+GGG - Chr1:85288785-85288804 MsG0180004989.01.T01:CDS 40.0%
!! TTTGCTTTTGGTGGCTACAA+TGG - Chr1:85288784-85288803 MsG0180004989.01.T01:CDS 40.0%
!! TTTTGGTGCATTCCATGTAG+TGG - Chr1:85289665-85289684 MsG0180004989.01.T01:intron 40.0%
!!! CAAAAGAAGTGCTTTTGACC+AGG - Chr1:85290348-85290367 MsG0180004989.01.T01:intron 40.0%
!!! TTTTTGAGACCCAAGGCAAA+CGG - Chr1:85289735-85289754 MsG0180004989.01.T01:intron 40.0%
AAACCTTATAGCGAGCAGGT+GGG + Chr1:85284449-85284468 None:intergenic 45.0%
AACAGAAATGACTGCCACCT+TGG - Chr1:85288486-85288505 MsG0180004989.01.T01:intron 45.0%
AACCTGGACACTGTAATCCA+TGG - Chr1:85287228-85287247 MsG0180004989.01.T01:intron 45.0%
AACCTGGTTTACAAGGCCAA+TGG - Chr1:85285775-85285794 MsG0180004989.01.T01:intron 45.0%
AAGATCAGGTACAGGCTCTT+CGG - Chr1:85290325-85290344 MsG0180004989.01.T01:intron 45.0%
AATGCAGTCTGTGGAAGATC+AGG - Chr1:85290311-85290330 MsG0180004989.01.T01:intron 45.0%
ACCTGGTTTACAAGGCCAAT+GGG - Chr1:85285776-85285795 MsG0180004989.01.T01:intron 45.0%
ACGAAAATACTGCCGTGTAC+AGG + Chr1:85286484-85286503 None:intergenic 45.0%
AGAAGAAACAGAAGCTGCAG+CGG + Chr1:85289804-85289823 None:intergenic 45.0%
AGAGAGAGAGTTTACAGAGG+AGG - Chr1:85286755-85286774 MsG0180004989.01.T01:intron 45.0%
AGAGAGTTTACAGAGGAGGT+TGG - Chr1:85286759-85286778 MsG0180004989.01.T01:intron 45.0%
AGGGCCGAAAATTCTAAGCT+TGG - Chr1:85289982-85290001 MsG0180004989.01.T01:CDS 45.0%
AGTCCACAGAAACCACTACA+TGG + Chr1:85289680-85289699 None:intergenic 45.0%
ATATTGTGACCAGATGTGGC+AGG + Chr1:85284937-85284956 None:intergenic 45.0%
ATTTCTGCAGATTAGGTGGG+GGG - Chr1:85285092-85285111 MsG0180004989.01.T01:CDS 45.0%
CACTAAGACCCTGATAAGCA+AGG + Chr1:85288729-85288748 None:intergenic 45.0%
CAGCTGCTATACATGGAGAA+CGG - Chr1:85286280-85286299 MsG0180004989.01.T01:intron 45.0%
CATTCCTTGCTACAGAGCTT+GGG - Chr1:85290557-85290576 MsG0180004989.01.T01:CDS 45.0%
CCGAGTGTACACTTGGATAA+TGG + Chr1:85286584-85286603 None:intergenic 45.0%
CCTAGATTGCGCTTCAAGAT+AGG + Chr1:85287701-85287720 None:intergenic 45.0%
CCTATCTTGAAGCGCAATCT+AGG - Chr1:85287698-85287717 MsG0180004989.01.T01:intron 45.0%
CTAAAAGACACCTTCATGGG+TGG + Chr1:85285303-85285322 None:intergenic 45.0%
GAATAGTACAGACTCTTCGC+AGG + Chr1:85286856-85286875 None:intergenic 45.0%
GAGAAGACTTTCTGCTCTAC+AGG - Chr1:85287012-85287031 MsG0180004989.01.T01:intron 45.0%
GAGAGTTTACAGAGGAGGTT+GGG - Chr1:85286760-85286779 MsG0180004989.01.T01:intron 45.0%
GAGGCATAACAACATTCCCA+AGG - Chr1:85288510-85288529 MsG0180004989.01.T01:intron 45.0%
GAGTTTGGCGATTGTTTGGT+TGG - Chr1:85290413-85290432 MsG0180004989.01.T01:intron 45.0%
GATCATGCAGCTGCTATACA+TGG - Chr1:85286273-85286292 MsG0180004989.01.T01:intron 45.0%
GATGTTGAGCTCCAACTTGA+TGG - Chr1:85290610-85290629 MsG0180004989.01.T01:intron 45.0%
GCAGCTGCATGATCATATCT+AGG + Chr1:85286267-85286286 None:intergenic 45.0%
GCATGATCATATCTAGGAGC+TGG + Chr1:85286261-85286280 None:intergenic 45.0%
GCCGAAAATTCTAAGCTTGG+AGG - Chr1:85289985-85290004 MsG0180004989.01.T01:CDS 45.0%
GGAAGGATATGAGAGACATG+AGG - Chr1:85286796-85286815 MsG0180004989.01.T01:intron 45.0%
GGTATAGCAATGAGGTATGC+AGG - Chr1:85288809-85288828 MsG0180004989.01.T01:CDS 45.0%
GTAATTAACCCTTGTAGCGG+CGG - Chr1:85285813-85285832 MsG0180004989.01.T01:intron 45.0%
GTGCAGCCCTCTGATATATT+TGG + Chr1:85287761-85287780 None:intergenic 45.0%
GTTTGGCGATTGTTTGGTTG+GGG - Chr1:85290415-85290434 MsG0180004989.01.T01:intron 45.0%
TAAACCTTATAGCGAGCAGG+TGG + Chr1:85284450-85284469 None:intergenic 45.0%
TAAAGAGACACCTTCATGGG+TGG - Chr1:85285219-85285238 MsG0180004989.01.T01:intron 45.0%
TAATTAACCCTTGTAGCGGC+GGG - Chr1:85285814-85285833 MsG0180004989.01.T01:intron 45.0%
TCGGCATTTATCGGATGTTC+AGG - Chr1:85284750-85284769 MsG0180004989.01.T01:three_prime_UTR 45.0%
TGATCATATCTAGGAGCTGG+AGG + Chr1:85286258-85286277 None:intergenic 45.0%
TGCCACATCTGGTCACAATA+TGG - Chr1:85284936-85284955 MsG0180004989.01.T01:CDS 45.0%
TTGCTGGTGAAGATAGGAGA+AGG - Chr1:85286070-85286089 MsG0180004989.01.T01:CDS 45.0%
TTTGGCGATTGTTTGGTTGG+GGG - Chr1:85290416-85290435 MsG0180004989.01.T01:intron 45.0%
! AAGTGCTTTTGACCAGGAGA+TGG - Chr1:85290354-85290373 MsG0180004989.01.T01:intron 45.0%
! ATTTTTCTAGGTAGCCCGTG+TGG - Chr1:85286008-85286027 MsG0180004989.01.T01:intron 45.0%
! CAATGGGAGGTATAGCAATG+AGG - Chr1:85288801-85288820 MsG0180004989.01.T01:CDS 45.0%
! CTCTGATTCTCCTTTTGTCC+AGG + Chr1:85284351-85284370 None:intergenic 45.0%
! GGTCAGATGCTGCTGAATTT+TGG - Chr1:85284783-85284802 MsG0180004989.01.T01:intron 45.0%
! GGTGGTGGCGATAACAAAAA+TGG - Chr1:85287531-85287550 MsG0180004989.01.T01:intron 45.0%
! GTACACGGCAGTATTTTCGT+AGG - Chr1:85286484-85286503 MsG0180004989.01.T01:intron 45.0%
! TTCCATGGATTACAGTGTCC+AGG + Chr1:85287233-85287252 None:intergenic 45.0%
! TTTTTCACTGCAGCATGCAG+CGG - Chr1:85284682-85284701 MsG0180004989.01.T01:intron 45.0%
! TTTTTCTAGGTAGCCCGTGT+GGG - Chr1:85286009-85286028 MsG0180004989.01.T01:intron 45.0%
!! AACTGGTTCATAGTTGGTGG+TGG - Chr1:85287516-85287535 MsG0180004989.01.T01:intron 45.0%
!! GGAGTTCTGTAATTTTGGCC+TGG + Chr1:85290275-85290294 None:intergenic 45.0%
!! GTGTACACTTGGATAATGGG+AGG + Chr1:85286580-85286599 None:intergenic 45.0%
!! ATATTAATAAAAACATAAAA+TGG + Chr1:85288045-85288064 None:intergenic 5.0%
!!! ATTTTATGTTTTTATTAATA+TGG - Chr1:85288044-85288063 MsG0180004989.01.T01:intron 5.0%
!!! CTTTTTTTAATTAAAAATTT+TGG - Chr1:85289648-85289667 MsG0180004989.01.T01:intron 5.0%
AAATGACTGCCACCTTGGAG+AGG - Chr1:85288491-85288510 MsG0180004989.01.T01:intron 50.0%
AATTAACCCTTGTAGCGGCG+GGG - Chr1:85285815-85285834 MsG0180004989.01.T01:intron 50.0%
ACTGCTCAGAGACAGAGTTC+TGG - Chr1:85290388-85290407 MsG0180004989.01.T01:intron 50.0%
CAAGAGTCAACAGTGCTGCA+TGG - Chr1:85287593-85287612 MsG0180004989.01.T01:intron 50.0%
CCTGGTTTACAAGGCCAATG+GGG - Chr1:85285777-85285796 MsG0180004989.01.T01:intron 50.0%
GAACGGAAATGTTGGGAAGG+AGG - Chr1:85286822-85286841 MsG0180004989.01.T01:intron 50.0%
GATTTAGTATCTCCCAGGGC+TGG - Chr1:85287468-85287487 MsG0180004989.01.T01:intron 50.0%
GCATTCCTTGCTACAGAGCT+TGG - Chr1:85290556-85290575 MsG0180004989.01.T01:CDS 50.0%
GCTGGAATCAATGCAGTCTG+TGG - Chr1:85290302-85290321 MsG0180004989.01.T01:intron 50.0%
GGAAATCACACCTTGAGGTG+TGG + Chr1:85285330-85285349 None:intergenic 50.0%
GGTGGAGTTTGGCGATTGTT+TGG - Chr1:85290409-85290428 MsG0180004989.01.T01:intron 50.0%
GTCTGCTCAGGAGTGATTGA+TGG - Chr1:85288748-85288767 MsG0180004989.01.T01:intron 50.0%
GTCTGTGGAAGATCAGGTAC+AGG - Chr1:85290317-85290336 MsG0180004989.01.T01:intron 50.0%
GTTGTTATGCCTCTCCAAGG+TGG + Chr1:85288503-85288522 None:intergenic 50.0%
TCAGGAACCCCAATCAGTCA+GGG - Chr1:85290131-85290150 MsG0180004989.01.T01:intron 50.0%
TCGGTGGAAGTCGTAATGGT+CGG - Chr1:85284731-85284750 MsG0180004989.01.T01:three_prime_UTR 50.0%
TCTCATATCCTTCCCCCTCA+TGG + Chr1:85286790-85286809 None:intergenic 50.0%
TGGTCCCAACCACAATCTCA+AGG - Chr1:85287444-85287463 MsG0180004989.01.T01:CDS 50.0%
TTCAGGAACCCCAATCAGTC+AGG - Chr1:85290130-85290149 MsG0180004989.01.T01:intron 50.0%
TTGCTAGAAGCCACCCATGA+AGG - Chr1:85285290-85285309 MsG0180004989.01.T01:intron 50.0%
TTGCTAGAAGCCACCCATGA+AGG + Chr1:85285309-85285290 None:intergenic 50.0%
! CCCAAGATTTTCCAGTCCAC+CGG - Chr1:85289769-85289788 MsG0180004989.01.T01:CDS 50.0%
! CTGAACACACCCGTCTCTTT+TGG + Chr1:85286917-85286936 None:intergenic 50.0%
! GACAGAGTTCTGGTGGAGTT+TGG - Chr1:85290398-85290417 MsG0180004989.01.T01:intron 50.0%
! GCAAAGTGTCCGTTTGCCTT+GGG + Chr1:85289747-85289766 None:intergenic 50.0%
! TCGTCATCGATTGGGCAGTT+TGG - Chr1:85287048-85287067 MsG0180004989.01.T01:intron 50.0%
!! CCGGTGGACTGGAAAATCTT+GGG + Chr1:85289772-85289791 None:intergenic 50.0%
!! CTTTTGGTGGCTACAATGGG+AGG - Chr1:85288788-85288807 MsG0180004989.01.T01:CDS 50.0%
AACAGGTTGCCCTGAAACCC+TGG - Chr1:85287926-85287945 MsG0180004989.01.T01:intron 55.0%
ACCACCCAAGCTCTGTAGCA+AGG + Chr1:85290564-85290583 None:intergenic 55.0%
ATACCAGCATGTCCAGCCCT+GGG + Chr1:85287483-85287502 None:intergenic 55.0%
ATGACAACTGAGGGGGAGAC+AGG + Chr1:85286965-85286984 None:intergenic 55.0%
CAGGGTCTTAGTGTCTGCTC+AGG - Chr1:85288736-85288755 MsG0180004989.01.T01:intron 55.0%
GAGAATCTGCCTGCCACATC+TGG - Chr1:85284925-85284944 MsG0180004989.01.T01:CDS 55.0%
GAGCAGGATGCCTACACAGA+GGG + Chr1:85287735-85287754 None:intergenic 55.0%
GGACAGTCTGCAACACTGGT+TGG - Chr1:85286030-85286049 MsG0180004989.01.T01:intron 55.0%
GTACAGACTCTTCGCAGGGT+CGG + Chr1:85286851-85286870 None:intergenic 55.0%
GTGTTGCAGACTGTCCCACA+CGG + Chr1:85286026-85286045 None:intergenic 55.0%
TCCTTGCTACAGAGCTTGGG+TGG - Chr1:85290560-85290579 MsG0180004989.01.T01:CDS 55.0%
TGAGCAGGATGCCTACACAG+AGG + Chr1:85287736-85287755 None:intergenic 55.0%
TGTGGGACAGTCTGCAACAC+TGG - Chr1:85286026-85286045 MsG0180004989.01.T01:intron 55.0%
TGTTGCAGACTGTCCCACAC+GGG + Chr1:85286025-85286044 None:intergenic 55.0%
! CGCAAAGTGTCCGTTTGCCT+TGG + Chr1:85289748-85289767 None:intergenic 55.0%
! GCTCAGAGACAGAGTTCTGG+TGG - Chr1:85290391-85290410 MsG0180004989.01.T01:intron 55.0%
!! CCCCATTGGCCTTGTAAACC+AGG + Chr1:85285780-85285799 None:intergenic 55.0%
!! GCCGGTGGACTGGAAAATCT+TGG + Chr1:85289773-85289792 None:intergenic 55.0%
CCTTATAGCGAGCAGGTGGG+CGG + Chr1:85284446-85284465 None:intergenic 60.0%
GATACCAGCATGTCCAGCCC+TGG + Chr1:85287484-85287503 None:intergenic 60.0%
TTGCAGCGTGCTCCATCTCC+TGG + Chr1:85290369-85290388 None:intergenic 60.0%
!! AGGAGGTTGGGCTAGCCATG+AGG - Chr1:85286772-85286791 MsG0180004989.01.T01:intron 60.0%
!! AGGTTGGGCTAGCCATGAGG+GGG - Chr1:85286775-85286794 MsG0180004989.01.T01:intron 60.0%
!! GAGGTTGGGCTAGCCATGAG+GGG - Chr1:85286774-85286793 MsG0180004989.01.T01:intron 60.0%
!! GGAGGTTGGGCTAGCCATGA+GGG - Chr1:85286773-85286792 MsG0180004989.01.T01:intron 60.0%
AACCCTTCCCCGCCGCTACA+AGG + Chr1:85285825-85285844 None:intergenic 65.0%
AACCCTTGTAGCGGCGGGGA+AGG - Chr1:85285819-85285838 MsG0180004989.01.T01:intron 65.0%
ACCCTTCCCCGCCGCTACAA+GGG + Chr1:85285824-85285843 None:intergenic 65.0%
ACCCTTGTAGCGGCGGGGAA+GGG - Chr1:85285820-85285839 MsG0180004989.01.T01:intron 65.0%
CCGCCCACCTGCTCGCTATA+AGG - Chr1:85284443-85284462 MsG0180004989.01.T01:three_prime_UTR 65.0%
TATAGCGAGCAGGTGGGCGG+CGG + Chr1:85284443-85284462 None:intergenic 65.0%
TCTCCCAGGGCTGGACATGC+TGG - Chr1:85287477-85287496 MsG0180004989.01.T01:intron 65.0%
TTGTAGCGGCGGGGAAGGGT+TGG - Chr1:85285824-85285843 MsG0180004989.01.T01:intron 65.0%
!! TGGGCTAGCCATGAGGGGGA+AGG - Chr1:85286779-85286798 MsG0180004989.01.T01:intron 65.0%
TAGCGGCGGGGAAGGGTTGG+TGG - Chr1:85285827-85285846 MsG0180004989.01.T01:intron 70.0%
GCTGCAGCGGCTGCAGCAGC+CGG + Chr1:85289791-85289810 None:intergenic 75.0%
GGCTGCAGCAGCCGGTGGAC+TGG + Chr1:85289783-85289802 None:intergenic 75.0%
! GCAGCGGCTGCAGCAGCCGG+TGG + Chr1:85289788-85289807 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr1 gene 85284133 85290785 85284133 ID=MsG0180004989.01;Name=MsG0180004989.01
Chr1 mRNA 85284133 85290785 85284133 ID=MsG0180004989.01.T01;Parent=MsG0180004989.01;Name=MsG0180004989.01.T01;_AED=0.35;_eAED=0.38;_QI=0|0.57|0.6|0.93|0.42|0.33|15|592|487
Chr1 exon 85284133 85284642 85284133 ID=MsG0180004989.01.T01:exon:9595;Parent=MsG0180004989.01.T01
Chr1 exon 85284728 85284783 85284728 ID=MsG0180004989.01.T01:exon:9594;Parent=MsG0180004989.01.T01
Chr1 exon 85284868 85285192 85284868 ID=MsG0180004989.01.T01:exon:9593;Parent=MsG0180004989.01.T01
Chr1 exon 85286062 85286179 85286062 ID=MsG0180004989.01.T01:exon:9592;Parent=MsG0180004989.01.T01
Chr1 exon 85286899 85286987 85286899 ID=MsG0180004989.01.T01:exon:9591;Parent=MsG0180004989.01.T01
Chr1 exon 85287366 85287480 85287366 ID=MsG0180004989.01.T01:exon:9590;Parent=MsG0180004989.01.T01
Chr1 exon 85288544 85288670 85288544 ID=MsG0180004989.01.T01:exon:9589;Parent=MsG0180004989.01.T01
Chr1 exon 85288761 85288900 85288761 ID=MsG0180004989.01.T01:exon:9588;Parent=MsG0180004989.01.T01
Chr1 exon 85289043 85289088 85289043 ID=MsG0180004989.01.T01:exon:9587;Parent=MsG0180004989.01.T01
Chr1 exon 85289245 85289305 85289245 ID=MsG0180004989.01.T01:exon:9586;Parent=MsG0180004989.01.T01
Chr1 exon 85289747 85289816 85289747 ID=MsG0180004989.01.T01:exon:9585;Parent=MsG0180004989.01.T01
Chr1 exon 85289961 85290060 85289961 ID=MsG0180004989.01.T01:exon:9584;Parent=MsG0180004989.01.T01
Chr1 exon 85290147 85290223 85290147 ID=MsG0180004989.01.T01:exon:9583;Parent=MsG0180004989.01.T01
Chr1 exon 85290454 85290612 85290454 ID=MsG0180004989.01.T01:exon:9582;Parent=MsG0180004989.01.T01
Chr1 exon 85290723 85290785 85290723 ID=MsG0180004989.01.T01:exon:9581;Parent=MsG0180004989.01.T01
Chr1 CDS 85290723 85290785 85290723 ID=MsG0180004989.01.T01:cds;Parent=MsG0180004989.01.T01
Chr1 CDS 85290454 85290612 85290454 ID=MsG0180004989.01.T01:cds;Parent=MsG0180004989.01.T01
Chr1 CDS 85290147 85290223 85290147 ID=MsG0180004989.01.T01:cds;Parent=MsG0180004989.01.T01
Chr1 CDS 85289961 85290060 85289961 ID=MsG0180004989.01.T01:cds;Parent=MsG0180004989.01.T01
Chr1 CDS 85289747 85289816 85289747 ID=MsG0180004989.01.T01:cds;Parent=MsG0180004989.01.T01
Chr1 CDS 85289245 85289305 85289245 ID=MsG0180004989.01.T01:cds;Parent=MsG0180004989.01.T01
Chr1 CDS 85289043 85289088 85289043 ID=MsG0180004989.01.T01:cds;Parent=MsG0180004989.01.T01
Chr1 CDS 85288761 85288900 85288761 ID=MsG0180004989.01.T01:cds;Parent=MsG0180004989.01.T01
Chr1 CDS 85288544 85288670 85288544 ID=MsG0180004989.01.T01:cds;Parent=MsG0180004989.01.T01
Chr1 CDS 85287366 85287480 85287366 ID=MsG0180004989.01.T01:cds;Parent=MsG0180004989.01.T01
Chr1 CDS 85286899 85286987 85286899 ID=MsG0180004989.01.T01:cds;Parent=MsG0180004989.01.T01
Chr1 CDS 85286062 85286179 85286062 ID=MsG0180004989.01.T01:cds;Parent=MsG0180004989.01.T01
Chr1 CDS 85284894 85285192 85284894 ID=MsG0180004989.01.T01:cds;Parent=MsG0180004989.01.T01
Chr1 three_prime_UTR 85284868 85284893 85284868 ID=MsG0180004989.01.T01:three_prime_utr;Parent=MsG0180004989.01.T01
Chr1 three_prime_UTR 85284728 85284783 85284728 ID=MsG0180004989.01.T01:three_prime_utr;Parent=MsG0180004989.01.T01
Chr1 three_prime_UTR 85284133 85284642 85284133 ID=MsG0180004989.01.T01:three_prime_utr;Parent=MsG0180004989.01.T01
Gene Sequence

>MsG0180004989.01.T01

TGGCATCATGGATGTGTATTATCGTATAACGTTGAAATTTGTCGCATTCTTGTGCCCATGATTCCTGAAGTGACAATCAAGGTGATCCGTACTGTAACAAGTATTCCTGGACAAAAGGAGAATCAGAGAGAAATGGAAGTCAACAATTGGCATAAAGAACTTACATATGATAATTGGGTACATTACTGTAACTGGTGCCGCCGCCCACCTGCTCGCTATAAGCATGCAGCGGCAGTAGTTGATGAAAATTATACATTTTCGGTGGAAGTCGTAATGGTCGGCATTTATCGGATGTTCAGAAGTTTGACGTGGTCTTCTCTAAAGCTAAAAGCTGATACTGGAAAAGATAATGGCAACAGTTCACAGGAGAATCTGCCTGCCACATCTGGTCACAATATGATTAGGTGGGGGGAGAAACTACTTATTCTTGGTGGCAGTTCAAGGGACACTTCTGATACCTTAAAGGTTATTCAATACATTGACATTGAAACATGCCAGTTTGAGTTATTAAGACTTCTGGAAGTGTTCCGCGGCGGGGAAGGGTTGGTGGTTGCCGTTCTGTTTACATCCTTTATCGTAGCCCGTGTGGGACAGTCTGCAACACTGGTTGGTTCAAGAGTTATATTGTTTGCTGGTGAAGATAGGAGAAGGAAGCTGTTGAATGATGTCCATGTTCTCGATCTTGAAAGTATGACTTGGGATGTGATAAAGACTTCGCAGACACCTCCAGCTCCTAGATATGATCATGCAGCTGCTATACATGGAGAACGGTACCTTATGATTTTTGGTGGTTGCTCTCATTCTGTCTTCTTCAATGATCTACACCTATTAGACTTGCAAACTATGGAATGGTCCCAACCACAATCTCAAGGTGATTTAGTATCTCCCAGGGCTGGACATGCTGGTATCACTATTGATGAAAACTGGTTCATAGTTGGTGGTGGCGATAACAAAAATGGTTGCCCTGAAACCCTGGTCTTAAACATGTCGAAACTTGTTTGGTCAGTTTTGAATGTTGTGAAGCAAAAAGATCCACTTTCCAGTGAGGGTCTTAGTGTCTGCTCAGGAGTGATTGATGGTGAAACATATCTGTTTGCTTTTGGTGGCTACAATGGGAGGTATAGCAATGAGGTATGCAGGAATCTCATCTCTATCTTAACATTGAGTTTTTTTGTTTTTGAGACCCAAGGCAAACGGACACTTTGCGTCCCAAGATTTTCCAGTCCACCGGCTGCTGCAGCCGCTGCAGCTTCTGTTTCTTCTGCATATGCATTGTCTAAATCTGAGAAGTTGGATTTCATGCAACTGGATGATATAACTCCCAAGTCATCTGTAAATGGTCATCATCAAAGTGATGTCACAATTACAATTGAAGCATTAAAGAAGAAAAGAGGTTATTGGAATTGTCAATTACAGAAGTCAGGGCCGAAAATTCTAAGCTTGGAGGTGAGATACATGAAGTAA

Protein sequence

>MsG0180004989.01.T01

WHHGCVLSYNVEICRILVPMIPEVTIKVIRTVTSIPGQKENQREMEVNNWHKELTYDNWVHYCNWCRRPPARYKHAAAVVDENYTFSVEVVMVGIYRMFRSLTWSSLKLKADTGKDNGNSSQENLPATSGHNMIRWGEKLLILGGSSRDTSDTLKVIQYIDIETCQFELLRLLEVFRGGEGLVVAVLFTSFIVARVGQSATLVGSRVILFAGEDRRRKLLNDVHVLDLESMTWDVIKTSQTPPAPRYDHAAAIHGERYLMIFGGCSHSVFFNDLHLLDLQTMEWSQPQSQGDLVSPRAGHAGITIDENWFIVGGGDNKNGCPETLVLNMSKLVWSVLNVVKQKDPLSSEGLSVCSGVIDGETYLFAFGGYNGRYSNEVCRNLISILTLSFFVFETQGKRTLCVPRFSSPPAAAAAAASVSSAYALSKSEKLDFMQLDDITPKSSVNGHHQSDVTITIEALKKKRGYWNCQLQKSGPKILSLEVRYMK*