AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039905.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039905.01.T01 MTR_7g081300 93.233 266 2 1 1 250 1 266 0.0 504
MsG0780039905.01.T01 MTR_7g081300 92.275 233 2 1 1 217 1 233 6.37e-159 440
MsG0780039905.01.T01 MTR_8g007175 74.060 266 49 3 1 250 1 262 1.07e-138 390
MsG0780039905.01.T01 MTR_8g007175 74.390 246 46 2 21 250 13 257 9.22e-130 367
MsG0780039905.01.T01 MTR_8g007175 74.262 237 42 2 1 221 1 234 2.38e-123 350
MsG0780039905.01.T01 MTR_8g007175 75.107 233 39 2 1 217 1 230 3.24e-122 347
MsG0780039905.01.T01 MTR_8g007175 78.919 185 36 1 1 185 1 182 1.98e-102 296
MsG0780039905.01.T01 MTR_0258s0040 57.265 234 81 2 32 248 1 232 5.32e-93 273
MsG0780039905.01.T01 MTR_0258s0040 57.511 233 81 2 32 248 40 270 9.16e-93 274
MsG0780039905.01.T01 MTR_0258s0040 57.265 234 81 2 32 248 40 271 1.29e-92 274
MsG0780039905.01.T01 MTR_3g085460 56.612 242 88 1 25 249 20 261 3.70e-91 270
MsG0780039905.01.T01 MTR_3g085460 57.511 233 82 1 34 249 17 249 3.69e-89 264
MsG0780039905.01.T01 MTR_7g087440 51.899 237 97 2 29 248 81 317 1.18e-82 250
MsG0780039905.01.T01 MTR_3g085460 59.686 191 60 1 76 249 1 191 6.19e-80 239
MsG0780039905.01.T01 MTR_0258s0040 57.212 208 70 2 32 222 40 245 4.17e-79 238
MsG0780039905.01.T01 MTR_0258s0040 57.212 208 70 2 32 222 56 261 6.97e-79 238
MsG0780039905.01.T01 MTR_3g085460 56.585 205 72 1 34 221 17 221 5.74e-74 224
MsG0780039905.01.T01 MTR_0258s0040 63.158 152 54 1 32 183 56 205 3.80e-64 199
MsG0780039905.01.T01 MTR_3g085460 60.377 159 63 0 32 190 15 173 8.79e-61 189
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039905.01.T01 AT3G60260 75.564 266 49 1 1 250 1 266 8.70e-151 421
MsG0780039905.01.T01 AT3G60260 75.564 266 49 1 1 250 1 266 8.70e-151 421
MsG0780039905.01.T01 AT3G60260 75.564 266 49 1 1 250 1 266 8.70e-151 421
MsG0780039905.01.T01 AT2G44770 76.692 266 46 1 1 250 1 266 1.59e-150 420
MsG0780039905.01.T01 AT3G60260 73.529 238 47 1 29 250 7 244 5.66e-130 367
MsG0780039905.01.T01 AT1G67400 53.968 252 95 3 15 249 34 281 3.68e-94 278
MsG0780039905.01.T01 AT1G03620 54.202 238 89 2 28 248 29 263 4.37e-91 270
MsG0780039905.01.T01 AT1G03620 54.202 238 89 2 28 248 29 263 4.37e-91 270
MsG0780039905.01.T01 AT1G03620 54.202 238 89 2 28 248 29 263 4.37e-91 270
MsG0780039905.01.T01 AT1G03620 54.202 238 89 2 28 248 29 263 4.37e-91 270
MsG0780039905.01.T01 AT1G03620 54.202 238 89 2 28 248 29 263 4.37e-91 270
MsG0780039905.01.T01 AT1G03620 54.202 238 89 2 28 248 29 263 4.37e-91 270
MsG0780039905.01.T01 AT1G03620 54.202 238 89 2 28 248 29 263 4.37e-91 270
MsG0780039905.01.T01 AT1G03620 54.202 238 89 2 28 248 29 263 4.37e-91 270
MsG0780039905.01.T01 AT1G03620 54.202 238 89 2 28 248 29 263 4.37e-91 270
MsG0780039905.01.T01 AT1G03620 55.556 234 84 3 32 248 1 231 7.11e-91 268
MsG0780039905.01.T01 AT1G03620 55.556 234 84 3 32 248 1 231 7.11e-91 268
MsG0780039905.01.T01 AT1G03620 55.556 234 84 3 32 248 1 231 7.11e-91 268
MsG0780039905.01.T01 AT1G03620 55.042 238 87 3 28 248 61 295 1.54e-90 270
MsG0780039905.01.T01 AT3G03610 53.138 239 95 2 29 250 85 323 1.21e-83 253
MsG0780039905.01.T01 AT3G03610 53.138 239 95 2 29 250 85 323 1.21e-83 253
MsG0780039905.01.T01 AT3G03610 53.138 239 95 2 29 250 85 323 1.21e-83 253
MsG0780039905.01.T01 AT3G03610 53.138 239 95 2 29 250 97 335 1.60e-83 253
MsG0780039905.01.T01 AT3G43400 56.738 141 41 2 97 221 71 207 6.80e-50 163

Find 105 sgRNAs with CRISPR-Local

Find 313 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGAATCTAATAGGGTTTA+TGG 0.199304 7:+70292542 None:intergenic
AGGAATCCTTAAGGGCTTTA+TGG 0.211377 7:-70290528 MsG0780039905.01.T01:CDS
ATTTCGTTAATGTCCATTAA+TGG 0.214294 7:-70287686 MsG0780039905.01.T01:three_prime_UTR
GAGAAAAGAAAGAATCTAAT+AGG 0.219964 7:+70292534 None:intergenic
TAAACACGCTTCCAATCTTT+TGG 0.298747 7:-70287498 MsG0780039905.01.T01:three_prime_UTR
TTTCGTTAATGTCCATTAAT+GGG 0.319926 7:-70287685 MsG0780039905.01.T01:three_prime_UTR
CAAGACGAAGAATTCGAAAA+TGG 0.331833 7:-70292256 MsG0780039905.01.T01:exon
GAGTACCCATTTGCGGTTGC+TGG 0.375334 7:-70289240 MsG0780039905.01.T01:CDS
CCTGTTGGAGGATGTATTGC+TGG 0.385839 7:-70287798 MsG0780039905.01.T01:three_prime_UTR
AGATCATACCGGAAAATTCC+TGG 0.390564 7:+70290282 None:intergenic
GGATTGCAGTATCATAATTC+AGG 0.399167 7:-70287655 MsG0780039905.01.T01:three_prime_UTR
ATCTACCTAAAATCTGTTGA+TGG 0.403619 7:+70290427 None:intergenic
AGCATTCCATAAAGCCCTTA+AGG 0.404955 7:+70290522 None:intergenic
TGGACATTAACGAAATATAT+AGG 0.406419 7:+70287693 None:intergenic
CTAGTTGTGTAAGGTCTTCA+AGG 0.412328 7:+70288030 None:intergenic
AAACAAAGAAAACGCCTTAA+CGG 0.416484 7:-70292644 MsG0780039905.01.T01:five_prime_UTR
TCACCACCACGACCGCGAAC+TGG 0.416741 7:+70292341 None:intergenic
TGTCCATTAATGGGAAAATA+CGG 0.419631 7:-70287676 MsG0780039905.01.T01:three_prime_UTR
TTAACACCAGCAACCGCAAA+TGG 0.419764 7:+70289234 None:intergenic
GAAGAGACTACCTGGTGCTC+AGG 0.420184 7:+70290740 None:intergenic
AAATGTAGGTTTGCTTTGCT+TGG 0.423318 7:-70287751 MsG0780039905.01.T01:three_prime_UTR
CCAACAAATATTACCTGGTA+TGG 0.428837 7:+70291156 None:intergenic
TCAGGCAGGTTTACTAAAGT+TGG 0.432978 7:-70287637 MsG0780039905.01.T01:three_prime_UTR
GAAATCTACACGCCGTCAGC+TGG 0.434732 7:-70288066 MsG0780039905.01.T01:CDS
AGAAAAGAAAGAATCTAATA+GGG 0.436025 7:+70292535 None:intergenic
TTCCATGCACGCGTCATACA+TGG 0.440337 7:-70288258 MsG0780039905.01.T01:CDS
TGGCAACAATACCAAAAGAT+TGG 0.445317 7:+70287487 None:intergenic
TTGCTGGCTGACATACAGTC+AGG 0.450369 7:-70287782 MsG0780039905.01.T01:three_prime_UTR
GATGATCTTAGGAATCCTTA+AGG 0.450878 7:-70290537 MsG0780039905.01.T01:intron
AAGCCATTGAGTTCTTCTTC+AGG 0.450943 7:+70290493 None:intergenic
ATGATCTTAGGAATCCTTAA+GGG 0.451275 7:-70290536 MsG0780039905.01.T01:intron
CATATCATTGGCAGGGGTGG+TGG 0.452395 7:-70290337 MsG0780039905.01.T01:intron
TCGTGTGAGAAGTTTGTATG+AGG 0.455180 7:+70287998 None:intergenic
GTGTGATATCATCAAGGGTC+TGG 0.458653 7:-70287842 MsG0780039905.01.T01:three_prime_UTR
AGGAAGAAACGGTTAGAAAG+TGG 0.463798 7:+70292447 None:intergenic
AGAAAGATCTGGAACAGGTT+GGG 0.475602 7:+70292471 None:intergenic
GTTACAGCTGAGTTTGTGAC+AGG 0.476804 7:-70291264 MsG0780039905.01.T01:intron
TTTCTTTCTCTTTCTTTCCC+GGG 0.477649 7:-70292506 MsG0780039905.01.T01:five_prime_UTR
TAGAAAGTGGAAGAAAGATC+TGG 0.486762 7:+70292460 None:intergenic
GTACATCTTCTAGTTGTGTA+AGG 0.487362 7:+70288021 None:intergenic
AACGCGTACCATTCATCTTC+CGG 0.493195 7:-70292174 MsG0780039905.01.T01:intron
GGGTGGTGGTTACATATCAT+TGG 0.494330 7:-70290323 MsG0780039905.01.T01:CDS
TGGAAAGACATGGGCTGGCA+AGG 0.494938 7:-70290457 MsG0780039905.01.T01:CDS
AGTTAAGATTTAAATCCTGT+TGG 0.496510 7:-70287813 MsG0780039905.01.T01:three_prime_UTR
TAAGATTTAAATCCTGTTGG+AGG 0.497097 7:-70287810 MsG0780039905.01.T01:three_prime_UTR
GTGGAAGAAAGATCTGGAAC+AGG 0.499036 7:+70292466 None:intergenic
AGCAGTGGAAAGACATGGGC+TGG 0.501356 7:-70290462 MsG0780039905.01.T01:CDS
TGCAGTATCATAATTCAGGC+AGG 0.504316 7:-70287651 MsG0780039905.01.T01:three_prime_UTR
ATTGAATACCGGAAGATGAA+TGG 0.510688 7:+70292166 None:intergenic
ACAGGATCAACGGCATGGAT+TGG 0.515977 7:-70291246 MsG0780039905.01.T01:CDS
CCAGCAATACATCCTCCAAC+AGG 0.516020 7:+70287798 None:intergenic
AGATTAGATTGTAATGATTG+TGG 0.516218 7:-70287720 MsG0780039905.01.T01:three_prime_UTR
TTGCATAACATTCAAGCTGA+TGG 0.521212 7:-70288294 MsG0780039905.01.T01:CDS
ATCCATGTATGACGCGTGCA+TGG 0.526326 7:+70288256 None:intergenic
AGACATGGGCTGGCAAGGGA+AGG 0.528180 7:-70290452 MsG0780039905.01.T01:CDS
TAGTTCTATCCCTGAGCACC+AGG 0.531050 7:-70290750 MsG0780039905.01.T01:intron
TTTCCTGAAGAAGAACTCAA+TGG 0.539229 7:-70290496 MsG0780039905.01.T01:CDS
TGTTAGTTAAATGTTGAAGT+GGG 0.539821 7:+70287891 None:intergenic
CAAATGCTAGATCTTGAAGC+AGG 0.539920 7:-70289192 MsG0780039905.01.T01:intron
TAACACCAGCAACCGCAAAT+GGG 0.546447 7:+70289235 None:intergenic
ATGTTAGTTAAATGTTGAAG+TGG 0.548053 7:+70287890 None:intergenic
GTCAGGGGAGTCTGAAATGT+AGG 0.554862 7:-70287765 MsG0780039905.01.T01:three_prime_UTR
AAGAAAGATCTGGAACAGGT+TGG 0.554968 7:+70292470 None:intergenic
AATTCGAAAATGGATGATAG+AGG 0.555587 7:-70292246 MsG0780039905.01.T01:exon
TCAACGGCATGGATTGGCCG+AGG 0.555638 7:-70291240 MsG0780039905.01.T01:CDS
AATAATAAAGTAATAAAATG+TGG 0.559523 7:-70292728 MsG0780039905.01.T01:five_prime_UTR
AGTGTGGGAGTACCCATTTG+CGG 0.560410 7:-70289247 MsG0780039905.01.T01:CDS
CCTTCAAGTTAAAACTAGAC+TGG 0.566016 7:+70287954 None:intergenic
TGGTATACATGAAGGAGCGC+AGG 0.569758 7:-70292708 MsG0780039905.01.T01:five_prime_UTR
CACATACACAAGACAAACCT+CGG 0.571165 7:+70291223 None:intergenic
ATGGCTTGATTTCAGAGCAG+TGG 0.573093 7:-70290477 MsG0780039905.01.T01:CDS
AAATGTTGAAGTGGGAAGAG+TGG 0.573324 7:+70287899 None:intergenic
GGAAAGACATGGGCTGGCAA+GGG 0.574077 7:-70290456 MsG0780039905.01.T01:CDS
ATAAAATGTGGTATACATGA+AGG 0.576158 7:-70292716 MsG0780039905.01.T01:five_prime_UTR
AGCCATGTGTGATATCATCA+AGG 0.579526 7:-70287848 MsG0780039905.01.T01:three_prime_UTR
AAGAGACTACCTGGTGCTCA+GGG 0.585963 7:+70290741 None:intergenic
TCAGGGATAGAACTATCATA+TGG 0.590812 7:+70290758 None:intergenic
TTTCCAGTTCGCGGTCGTGG+TGG 0.593806 7:-70292344 MsG0780039905.01.T01:five_prime_UTR
TGAGTTTGTGACAGGATCAA+CGG 0.595004 7:-70291256 MsG0780039905.01.T01:CDS
TTCAGGAAGAATGCTTGCAG+AGG 0.599345 7:-70290802 MsG0780039905.01.T01:intron
GGAAGGAGTTCGTTCAGTGT+GGG 0.599733 7:-70289262 MsG0780039905.01.T01:CDS
TTCAGAGCAGTGGAAAGACA+TGG 0.604712 7:-70290467 MsG0780039905.01.T01:CDS
TGATATCATCAAGGGTCTGG+AGG 0.605312 7:-70287839 MsG0780039905.01.T01:three_prime_UTR
TTGTGACAGGATCAACGGCA+TGG 0.606238 7:-70291251 MsG0780039905.01.T01:CDS
AGGAAGGAGTTCGTTCAGTG+TGG 0.607173 7:-70289263 MsG0780039905.01.T01:CDS
TGCTGGCTGACATACAGTCA+GGG 0.616409 7:-70287781 MsG0780039905.01.T01:three_prime_UTR
AAATATGCAGTATACGAACA+AGG 0.621068 7:+70287601 None:intergenic
ATATCACACATGGCTCACCT+TGG 0.623252 7:+70287856 None:intergenic
CGTGTGAGAAGTTTGTATGA+GGG 0.626967 7:+70287999 None:intergenic
GAAGTTCTTTCTCCAGCTGA+CGG 0.629691 7:+70288054 None:intergenic
TATGCAATAGAGAAGATCAA+AGG 0.629891 7:+70288310 None:intergenic
TCAAGCTGATGGACAATCAG+TGG 0.630012 7:-70288283 MsG0780039905.01.T01:CDS
ATTTCACAAGGTCTTGATCG+TGG 0.637712 7:-70292198 MsG0780039905.01.T01:CDS
GTGAATTGAATCGAATGCGG+AGG 0.640694 7:+70292417 None:intergenic
AATATGCAGTATACGAACAA+GGG 0.643938 7:+70287602 None:intergenic
TCGAAAATGGATGATAGAGG+TGG 0.645819 7:-70292243 MsG0780039905.01.T01:exon
ACCCTTGATGATATCACACA+TGG 0.657299 7:+70287846 None:intergenic
TCAGAGCAGTGGAAAGACAT+GGG 0.661625 7:-70290466 MsG0780039905.01.T01:CDS
TCAAGTTAAAACTAGACTGG+CGG 0.673365 7:+70287957 None:intergenic
GCTGGCTGACATACAGTCAG+GGG 0.680531 7:-70287780 MsG0780039905.01.T01:three_prime_UTR
GCCATGTGTGATATCATCAA+GGG 0.683404 7:-70287847 MsG0780039905.01.T01:three_prime_UTR
ATGTCTGACAGAAAATGAGT+CGG 0.689115 7:-70288333 MsG0780039905.01.T01:intron
AATGTGAATTGAATCGAATG+CGG 0.707163 7:+70292414 None:intergenic
TAACATTTGAGCAAAGACCA+AGG 0.711307 7:-70287873 MsG0780039905.01.T01:three_prime_UTR
GCTGTTCGTAGAATTTCACA+AGG 0.713414 7:-70292210 MsG0780039905.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAAAGTAATAAAATG+TGG - Chr7:70287509-70287528 MsG0780039905.01.T01:three_prime_UTR 10.0%
!! AGAGTAAAAATTATAATAAA+AGG + Chr7:70291084-70291103 None:intergenic 10.0%
!!! TTTTGCATTTTTTTTTTTTA+AGG - Chr7:70290787-70290806 MsG0780039905.01.T01:CDS 10.0%
!! CATAAGAAAAAAATATTGTA+AGG + Chr7:70291391-70291410 None:intergenic 15.0%
!!! AAATAAATTTTGATTTCTCT+TGG - Chr7:70291324-70291343 MsG0780039905.01.T01:intron 15.0%
!!! TAAATTGATAAAGTTTTGAT+TGG - Chr7:70288216-70288235 MsG0780039905.01.T01:intron 15.0%
!!! TGTCTATATTAATCTAATTT+TGG - Chr7:70290849-70290868 MsG0780039905.01.T01:intron 15.0%
!! AAAAATAAAACAGATCATAC+CGG + Chr7:70289969-70289988 None:intergenic 20.0%
!! AAAACTTGTATTAAGAAAGT+TGG - Chr7:70288916-70288935 MsG0780039905.01.T01:intron 20.0%
!! AAGCTGTTTATTATGTTTAA+TGG - Chr7:70288311-70288330 MsG0780039905.01.T01:CDS 20.0%
!! AGAAAAGAAAGAATCTAATA+GGG + Chr7:70287705-70287724 None:intergenic 20.0%
!! AGTGAAAATAAATTAGAATG+AGG + Chr7:70289863-70289882 None:intergenic 20.0%
!! ATAAAATCACAACAACTTTA+TGG + Chr7:70291689-70291708 None:intergenic 20.0%
!! ATAAATGCTTATAAAGTTAC+AGG + Chr7:70291230-70291249 None:intergenic 20.0%
!! ATCAAATTCAATTCATTACT+TGG + Chr7:70291459-70291478 None:intergenic 20.0%
!! CTGAATAAAATTATTGCTTT+CGG - Chr7:70290267-70290286 MsG0780039905.01.T01:intron 20.0%
!! TAAGATGAACAAAGATAAAA+AGG + Chr7:70289326-70289345 None:intergenic 20.0%
!! TAGATTAATATAGACAATTC+AGG + Chr7:70290845-70290864 None:intergenic 20.0%
!! TATATTTCATCCAAAAGAAA+GGG - Chr7:70290098-70290117 MsG0780039905.01.T01:intron 20.0%
!! TATTTAAAAACACAAATAGC+TGG + Chr7:70291309-70291328 None:intergenic 20.0%
!! TCAAATTCAATTCATTACTT+GGG + Chr7:70291458-70291477 None:intergenic 20.0%
!! TGAATAAAATTATTGCTTTC+GGG - Chr7:70290268-70290287 MsG0780039905.01.T01:intron 20.0%
!! TTTATCTACAAAATAAACTC+AGG + Chr7:70292028-70292047 None:intergenic 20.0%
!! TTTCTATTTATGCATATCAT+TGG - Chr7:70289888-70289907 MsG0780039905.01.T01:intron 20.0%
!!! AAATAGATTTAAGGTTTGAA+CGG + Chr7:70290895-70290914 None:intergenic 20.0%
!!! AATAAAATTTCCCTTTCTTT+TGG + Chr7:70290111-70290130 None:intergenic 20.0%
!!! AATGTTTTTCAATTGTGTTT+CGG - Chr7:70289220-70289239 MsG0780039905.01.T01:CDS 20.0%
!!! AGCATTCATGTAATTTTTAA+TGG - Chr7:70288379-70288398 MsG0780039905.01.T01:intron 20.0%
!!! ATTTTAGGTAGATAATATTC+TGG - Chr7:70289820-70289839 MsG0780039905.01.T01:intron 20.0%
!!! GAGTTTATTTTGTAGATAAA+GGG - Chr7:70292028-70292047 MsG0780039905.01.T01:intron 20.0%
!!! TAAACATAATAAACAGCTTT+TGG + Chr7:70288310-70288329 None:intergenic 20.0%
!!! TCATTTTCTCAAATTGTTAA+TGG + Chr7:70288620-70288639 None:intergenic 20.0%
!!! TGAGTTTATTTTGTAGATAA+AGG - Chr7:70292027-70292046 MsG0780039905.01.T01:intron 20.0%
!!! TTGCATATTTTCAGTTTTTT+GGG - Chr7:70290639-70290658 MsG0780039905.01.T01:intron 20.0%
! AAAAATCACGAGAAAATTGA+AGG + Chr7:70288103-70288122 None:intergenic 25.0%
! AAAGAATCTAATAGGGTTTA+TGG + Chr7:70287698-70287717 None:intergenic 25.0%
! AATGGTTGTCTATTCAATTT+GGG - Chr7:70290710-70290729 MsG0780039905.01.T01:intron 25.0%
! ACAAATGTATTATGTGATGA+AGG - Chr7:70288846-70288865 MsG0780039905.01.T01:intron 25.0%
! ACCAATAAAACATATCAATC+TGG + Chr7:70290327-70290346 None:intergenic 25.0%
! AGATTAGATTGTAATGATTG+TGG - Chr7:70292517-70292536 MsG0780039905.01.T01:five_prime_UTR 25.0%
! AGTTAAGATTTAAATCCTGT+TGG - Chr7:70292424-70292443 MsG0780039905.01.T01:five_prime_UTR 25.0%
! ATAAAATGTGGTATACATGA+AGG - Chr7:70287521-70287540 MsG0780039905.01.T01:three_prime_UTR 25.0%
! ATAGTTATGTTTCAGACATA+TGG - Chr7:70290734-70290753 MsG0780039905.01.T01:intron 25.0%
! ATATTGAGCTTAGTTTACTA+TGG - Chr7:70288263-70288282 MsG0780039905.01.T01:CDS 25.0%
! ATGTTAGTTAAATGTTGAAG+TGG + Chr7:70292350-70292369 None:intergenic 25.0%
! ATTTCGTTAATGTCCATTAA+TGG - Chr7:70292551-70292570 MsG0780039905.01.T01:five_prime_UTR 25.0%
! CAAAAAACTGAAAATATGCA+AGG + Chr7:70290640-70290659 None:intergenic 25.0%
! CAAATTCAATTCATTACTTG+GGG + Chr7:70291457-70291476 None:intergenic 25.0%
! GAAGGAAAAAAATTGAATAC+CGG + Chr7:70288085-70288104 None:intergenic 25.0%
! GAGAAAAGAAAGAATCTAAT+AGG + Chr7:70287706-70287725 None:intergenic 25.0%
! GCAAAGTCAAAATAGATTTA+AGG + Chr7:70290904-70290923 None:intergenic 25.0%
! GTATATTTCATCCAAAAGAA+AGG - Chr7:70290097-70290116 MsG0780039905.01.T01:intron 25.0%
! TATTAAAAAAGAGTAGAGAG+TGG + Chr7:70289375-70289394 None:intergenic 25.0%
! TATTAAGAAAGTTGGAAACT+CGG - Chr7:70288924-70288943 MsG0780039905.01.T01:intron 25.0%
! TGGACATTAACGAAATATAT+AGG + Chr7:70292547-70292566 None:intergenic 25.0%
! TGTTAGTTAAATGTTGAAGT+GGG + Chr7:70292349-70292368 None:intergenic 25.0%
! TTACAAGAAACAAGAAATAG+TGG - Chr7:70291830-70291849 MsG0780039905.01.T01:intron 25.0%
! TTGGATGAAATATACTAATG+TGG + Chr7:70290092-70290111 None:intergenic 25.0%
! TTTCGTTAATGTCCATTAAT+GGG - Chr7:70292552-70292571 MsG0780039905.01.T01:five_prime_UTR 25.0%
!! AAGTTGTTGTGATTTTATGA+AGG - Chr7:70291691-70291710 MsG0780039905.01.T01:intron 25.0%
!! AAGTTTGGAACTTAACAAAA+TGG - Chr7:70291636-70291655 MsG0780039905.01.T01:intron 25.0%
!! AGCAATAATTTTATTCAGCA+AGG + Chr7:70290265-70290284 None:intergenic 25.0%
!! AGTTTGGAACTTAACAAAAT+GGG - Chr7:70291637-70291656 MsG0780039905.01.T01:intron 25.0%
!! ATTGGTTTATATTTGAGACA+GGG - Chr7:70290341-70290360 MsG0780039905.01.T01:intron 25.0%
!! CTGTGTTGTAAACAATATTT+TGG - Chr7:70290001-70290020 MsG0780039905.01.T01:intron 25.0%
!! CTTGCATATTTTCAGTTTTT+TGG - Chr7:70290638-70290657 MsG0780039905.01.T01:intron 25.0%
!! TCATACAACTCTAAAAAGTA+AGG + Chr7:70290029-70290048 None:intergenic 25.0%
!! TGCATATTTTCAGTTTTTTG+GGG - Chr7:70290640-70290659 MsG0780039905.01.T01:intron 25.0%
!! TTTTATGAAGGCTTTTTGTA+AGG - Chr7:70291703-70291722 MsG0780039905.01.T01:intron 25.0%
!! TTTTTATGCATGATGATCTT+AGG - Chr7:70289689-70289708 MsG0780039905.01.T01:intron 25.0%
!!! AATCTTTTCAAGATCTTTTG+CGG - Chr7:70290947-70290966 MsG0780039905.01.T01:intron 25.0%
!!! ACTCATTTTTTCCTACAATT+AGG - Chr7:70291601-70291620 MsG0780039905.01.T01:intron 25.0%
!!! ATGATTGTGTTTGTTATGAA+TGG - Chr7:70290692-70290711 MsG0780039905.01.T01:intron 25.0%
!!! ATGTTTTTCAATTGTGTTTC+GGG - Chr7:70289221-70289240 MsG0780039905.01.T01:CDS 25.0%
!!! ATTTTTTCCTACAATTAGGA+AGG - Chr7:70291605-70291624 MsG0780039905.01.T01:intron 25.0%
!!! TAGAAGTTTTTGAAGATTGT+TGG - Chr7:70292089-70292108 MsG0780039905.01.T01:intron 25.0%
!!! TATTGGTTTATATTTGAGAC+AGG - Chr7:70290340-70290359 MsG0780039905.01.T01:intron 25.0%
!!! TTTTTTCCTACAATTAGGAA+GGG - Chr7:70291606-70291625 MsG0780039905.01.T01:intron 25.0%
AAACAAAGAAAACGCCTTAA+CGG - Chr7:70287593-70287612 MsG0780039905.01.T01:three_prime_UTR 30.0%
AAATATGCAGTATACGAACA+AGG + Chr7:70292639-70292658 None:intergenic 30.0%
AATATGCAGTATACGAACAA+GGG + Chr7:70292638-70292657 None:intergenic 30.0%
AATGCTTATAAAGTTACAGG+TGG + Chr7:70291227-70291246 None:intergenic 30.0%
AATGTATTATGTGATGAAGG+TGG - Chr7:70288849-70288868 MsG0780039905.01.T01:intron 30.0%
AATGTGAATTGAATCGAATG+CGG + Chr7:70287826-70287845 None:intergenic 30.0%
AATTCGAAAATGGATGATAG+AGG - Chr7:70287991-70288010 MsG0780039905.01.T01:exon 30.0%
ACTTTCTTAAAATTCCTTGC+AGG - Chr7:70291544-70291563 MsG0780039905.01.T01:intron 30.0%
AGAAAATCATGGAAGGAATT+GGG + Chr7:70290474-70290493 None:intergenic 30.0%
ATAGACAATTCAGGAAAACA+GGG + Chr7:70290836-70290855 None:intergenic 30.0%
ATAGAGAGTTAACAAAGTGT+TGG - Chr7:70288777-70288796 MsG0780039905.01.T01:intron 30.0%
ATCTACCTAAAATCTGTTGA+TGG + Chr7:70289813-70289832 None:intergenic 30.0%
ATGAAACAACAAAGACCATT+TGG + Chr7:70290194-70290213 None:intergenic 30.0%
ATGATCTTAGGAATCCTTAA+GGG - Chr7:70289701-70289720 MsG0780039905.01.T01:intron 30.0%
ATGCTTATAAAGTTACAGGT+GGG + Chr7:70291226-70291245 None:intergenic 30.0%
ATGGTTGTCTATTCAATTTG+GGG - Chr7:70290711-70290730 MsG0780039905.01.T01:intron 30.0%
ATGTCTAAAAGGATACATAG+GGG - Chr7:70291115-70291134 MsG0780039905.01.T01:intron 30.0%
ATTTATGCATATCATTGGCA+GGG - Chr7:70289893-70289912 MsG0780039905.01.T01:intron 30.0%
CAGCATATATCATGTCTAAA+AGG - Chr7:70291104-70291123 MsG0780039905.01.T01:intron 30.0%
CATCCATGATAGAAGAATTT+GGG - Chr7:70290301-70290320 MsG0780039905.01.T01:CDS 30.0%
CATGAAAAGCTATATGTACA+TGG + Chr7:70289605-70289624 None:intergenic 30.0%
CATGTCTAAAAGGATACATA+GGG - Chr7:70291114-70291133 MsG0780039905.01.T01:intron 30.0%
GAATGGTTGTCTATTCAATT+TGG - Chr7:70290709-70290728 MsG0780039905.01.T01:intron 30.0%
GAGTACTTTATTATGTGATG+AGG - Chr7:70288341-70288360 MsG0780039905.01.T01:intron 30.0%
GATGAAAGCAATTGAACATT+CGG + Chr7:70289263-70289282 None:intergenic 30.0%
GCAGGTAATTTCCAAAAATA+TGG - Chr7:70290580-70290599 MsG0780039905.01.T01:intron 30.0%
GTTGTTGACAAGTCAAATTT+GGG + Chr7:70291369-70291388 None:intergenic 30.0%
TAAGATTTAAATCCTGTTGG+AGG - Chr7:70292427-70292446 MsG0780039905.01.T01:five_prime_UTR 30.0%
TAAGCGAAAAAAGATGAAAG+AGG + Chr7:70291743-70291762 None:intergenic 30.0%
TAATTGAAGTAATCACGTGT+CGG - Chr7:70288642-70288661 MsG0780039905.01.T01:intron 30.0%
TATAGACAATTCAGGAAAAC+AGG + Chr7:70290837-70290856 None:intergenic 30.0%
TATGCAATAGAGAAGATCAA+AGG + Chr7:70291930-70291949 None:intergenic 30.0%
TATTTATGCATATCATTGGC+AGG - Chr7:70289892-70289911 MsG0780039905.01.T01:intron 30.0%
TCATCCATGATAGAAGAATT+TGG - Chr7:70290300-70290319 MsG0780039905.01.T01:CDS 30.0%
TCATGTCTAAAAGGATACAT+AGG - Chr7:70291113-70291132 MsG0780039905.01.T01:intron 30.0%
TGAAACAACAAAGACCATTT+GGG + Chr7:70290193-70290212 None:intergenic 30.0%
TGATCCTTGTACAAAAATAG+TGG - Chr7:70288439-70288458 MsG0780039905.01.T01:intron 30.0%
TGTCCATTAATGGGAAAATA+CGG - Chr7:70292561-70292580 MsG0780039905.01.T01:five_prime_UTR 30.0%
TGTTTACAACACAGAAAAGA+TGG + Chr7:70289995-70290014 None:intergenic 30.0%
TTAACTCTCTATTTCCTTCT+CGG + Chr7:70288769-70288788 None:intergenic 30.0%
TTCATGCATGCTTAATTAGA+TGG - Chr7:70290209-70290228 MsG0780039905.01.T01:intron 30.0%
TTCTTAAAGTTAAACAGCCT+GGG - Chr7:70290130-70290149 MsG0780039905.01.T01:intron 30.0%
TTGAAAGGAATAAACGTTGA+AGG + Chr7:70288140-70288159 None:intergenic 30.0%
TTGTAAATAAAGCAAGCTAG+TGG - Chr7:70288467-70288486 MsG0780039905.01.T01:intron 30.0%
TTTCAACAGAAAATCATGGA+AGG + Chr7:70290481-70290500 None:intergenic 30.0%
TTTCTCTTGGTTTATCTAAC+AGG - Chr7:70291337-70291356 MsG0780039905.01.T01:intron 30.0%
TTTCTTAAAGTTAAACAGCC+TGG - Chr7:70290129-70290148 MsG0780039905.01.T01:intron 30.0%
! AAGAGGATACACCATATTTT+TGG + Chr7:70290594-70290613 None:intergenic 30.0%
! AATCCGTATTTTCCCATTAA+TGG + Chr7:70292567-70292586 None:intergenic 30.0%
! ATGCTGAATTTTCCATTTTC+AGG - Chr7:70289418-70289437 MsG0780039905.01.T01:intron 30.0%
! GATTATTCATTTTGCCGTTA+AGG + Chr7:70287610-70287629 None:intergenic 30.0%
! GCCAGATTGATATGTTTTAT+TGG - Chr7:70290323-70290342 MsG0780039905.01.T01:CDS 30.0%
! GTTTTCTGATCTCATTTGAT+TGG - Chr7:70291765-70291784 MsG0780039905.01.T01:intron 30.0%
! TCTCTTTTCATCTTTGTACA+TGG - Chr7:70289150-70289169 MsG0780039905.01.T01:intron 30.0%
! TGTTCATCTTATTTGCCTAT+GGG - Chr7:70289335-70289354 MsG0780039905.01.T01:intron 30.0%
! TTGGTTTATATTTGAGACAG+GGG - Chr7:70290342-70290361 MsG0780039905.01.T01:intron 30.0%
! TTGTTCATCTTATTTGCCTA+TGG - Chr7:70289334-70289353 MsG0780039905.01.T01:intron 30.0%
! TTTTAATAGAAGAGACTACC+TGG + Chr7:70289508-70289527 None:intergenic 30.0%
! TTTTCTTTCTCTTTCTTTCC+CGG - Chr7:70287730-70287749 MsG0780039905.01.T01:three_prime_UTR 30.0%
!! CGCAATTTTGAAAAGTTGAA+AGG + Chr7:70288155-70288174 None:intergenic 30.0%
!!! GCAAATTATTTTGATCCCAT+AGG + Chr7:70289353-70289372 None:intergenic 30.0%
!!! GTTTTGATTGGATATAGTTG+AGG - Chr7:70288228-70288247 MsG0780039905.01.T01:intron 30.0%
!!! TCTTCCACTATTTTTGTACA+AGG + Chr7:70288446-70288465 None:intergenic 30.0%
!!! TTTTGATTTAACTCCATACC+AGG - Chr7:70289068-70289087 MsG0780039905.01.T01:intron 30.0%
AAAGACCATTTGGGAAGAAA+TGG + Chr7:70290184-70290203 None:intergenic 35.0%
AACAATAAAAGCTACCTGCA+AGG + Chr7:70291561-70291580 None:intergenic 35.0%
AATAGCTGGTAATATTTGCG+AGG + Chr7:70291295-70291314 None:intergenic 35.0%
ATGTCTGACAGAAAATGAGT+CGG - Chr7:70291904-70291923 MsG0780039905.01.T01:intron 35.0%
ATTGAATACCGGAAGATGAA+TGG + Chr7:70288074-70288093 None:intergenic 35.0%
CAAGACGAAGAATTCGAAAA+TGG - Chr7:70287981-70288000 MsG0780039905.01.T01:exon 35.0%
CACAATGCTTAGACAAGTTT+GGG + Chr7:70290505-70290524 None:intergenic 35.0%
CAGAAAATCATGGAAGGAAT+TGG + Chr7:70290475-70290494 None:intergenic 35.0%
CCAACAAATATTACCTGGTA+TGG + Chr7:70289084-70289103 None:intergenic 35.0%
CCATACCAGGTAATATTTGT+TGG - Chr7:70289081-70289100 MsG0780039905.01.T01:intron 35.0%
GAAAATCATGGAAGGAATTG+GGG + Chr7:70290473-70290492 None:intergenic 35.0%
GAGGAAAAAAGAGGAAGAAA+CGG + Chr7:70287804-70287823 None:intergenic 35.0%
GATATAGACAAAATCACGAG+AGG + Chr7:70288184-70288203 None:intergenic 35.0%
GATGATCTTAGGAATCCTTA+AGG - Chr7:70289700-70289719 MsG0780039905.01.T01:intron 35.0%
GGATTGCAGTATCATAATTC+AGG - Chr7:70292582-70292601 MsG0780039905.01.T01:five_prime_UTR 35.0%
GGTTGTTGACAAGTCAAATT+TGG + Chr7:70291370-70291389 None:intergenic 35.0%
TAACATTTGAGCAAAGACCA+AGG - Chr7:70292364-70292383 MsG0780039905.01.T01:five_prime_UTR 35.0%
TAGAAAGTGGAAGAAAGATC+TGG + Chr7:70287780-70287799 None:intergenic 35.0%
TATTTGACAAGGACATGTGT+TGG - Chr7:70288698-70288717 MsG0780039905.01.T01:intron 35.0%
TCAAGTTAAAACTAGACTGG+CGG + Chr7:70292283-70292302 None:intergenic 35.0%
TCAGCATTGTGAATTTACTG+TGG + Chr7:70289405-70289424 None:intergenic 35.0%
TCAGGGATAGAACTATCATA+TGG + Chr7:70289482-70289501 None:intergenic 35.0%
TGAAAATATGCAAGGAAGCT+CGG + Chr7:70290632-70290651 None:intergenic 35.0%
TGATGCCAACAAATATTACC+TGG + Chr7:70289089-70289108 None:intergenic 35.0%
TGCTTATAAAGTTACAGGTG+GGG + Chr7:70291225-70291244 None:intergenic 35.0%
TGTCAGTGTTGTATTTGACA+AGG - Chr7:70288687-70288706 MsG0780039905.01.T01:intron 35.0%
TTCAATTCATTACTTGGGGA+AGG + Chr7:70291453-70291472 None:intergenic 35.0%
TTGAAAATGTATACCTACCC+AGG + Chr7:70290150-70290169 None:intergenic 35.0%
TTGACAAGTCAAATTTGGGA+CGG + Chr7:70291365-70291384 None:intergenic 35.0%
TTGCATAACATTCAAGCTGA+TGG - Chr7:70291943-70291962 MsG0780039905.01.T01:intron 35.0%
TTTATGCATATCATTGGCAG+GGG - Chr7:70289894-70289913 MsG0780039905.01.T01:intron 35.0%
TTTCACATGGTTGGGTTTAA+TGG - Chr7:70289297-70289316 MsG0780039905.01.T01:intron 35.0%
TTTCCTGAAGAAGAACTCAA+TGG - Chr7:70289741-70289760 MsG0780039905.01.T01:intron 35.0%
TTTCTTTCTCTTTCTTTCCC+GGG - Chr7:70287731-70287750 MsG0780039905.01.T01:three_prime_UTR 35.0%
! AAATGTAGGTTTGCTTTGCT+TGG - Chr7:70292486-70292505 MsG0780039905.01.T01:five_prime_UTR 35.0%
! AGGATCCATCAACAGATTTT+AGG - Chr7:70289805-70289824 MsG0780039905.01.T01:intron 35.0%
! CCTTCAAGTTAAAACTAGAC+TGG + Chr7:70292286-70292305 None:intergenic 35.0%
! CTTAATTAGATGGTTGATGC+AGG - Chr7:70290219-70290238 MsG0780039905.01.T01:intron 35.0%
! GGGTAGGTATACATTTTCAA+TGG - Chr7:70290150-70290169 MsG0780039905.01.T01:intron 35.0%
! GGGTTTTCAACAGAAAATCA+TGG + Chr7:70290485-70290504 None:intergenic 35.0%
! GTACATCTTCTAGTTGTGTA+AGG + Chr7:70292219-70292238 None:intergenic 35.0%
! GTTACTTTGTTAACCTCTCT+AGG + Chr7:70290070-70290089 None:intergenic 35.0%
! GTTCAGTTTCTTAAAGCACT+CGG + Chr7:70288823-70288842 None:intergenic 35.0%
! TAAACACGCTTCCAATCTTT+TGG - Chr7:70292739-70292758 MsG0780039905.01.T01:five_prime_UTR 35.0%
!! TTTTTGGAAATTACCTGCTG+AGG + Chr7:70290578-70290597 None:intergenic 35.0%
!!! AGAATTTGCTGTTTTTTGCC+AGG - Chr7:70289937-70289956 MsG0780039905.01.T01:intron 35.0%
!!! CAGGGGATTTTGAAATTGAT+TGG - Chr7:70290359-70290378 MsG0780039905.01.T01:intron 35.0%
!!! CAGTTTTTTGGGGTTGAAAT+AGG - Chr7:70290650-70290669 MsG0780039905.01.T01:intron 35.0%
!!! CCAGTCTAGTTTTAACTTGA+AGG - Chr7:70292283-70292302 MsG0780039905.01.T01:five_prime_UTR 35.0%
!!! GTTTTTTGCCAGGAATTTTC+CGG - Chr7:70289947-70289966 MsG0780039905.01.T01:intron 35.0%
AAATGTTGAAGTGGGAAGAG+TGG + Chr7:70292341-70292360 None:intergenic 40.0%
AACCCAACCATGTGAAACAT+CGG + Chr7:70289294-70289313 None:intergenic 40.0%
AAGCAAGCCACTATATTCTG+TGG - Chr7:70288522-70288541 MsG0780039905.01.T01:intron 40.0%
AAGCCATTGAGTTCTTCTTC+AGG + Chr7:70289747-70289766 None:intergenic 40.0%
AGATCATACCGGAAAATTCC+TGG + Chr7:70289958-70289977 None:intergenic 40.0%
AGCATTCCATAAAGCCCTTA+AGG + Chr7:70289718-70289737 None:intergenic 40.0%
AGCCATGTGTGATATCATCA+AGG - Chr7:70292389-70292408 MsG0780039905.01.T01:five_prime_UTR 40.0%
AGGAAGAAACGGTTAGAAAG+TGG + Chr7:70287793-70287812 None:intergenic 40.0%
AGGAATCCTTAAGGGCTTTA+TGG - Chr7:70289709-70289728 MsG0780039905.01.T01:intron 40.0%
ATTTCACAAGGTCTTGATCG+TGG - Chr7:70288039-70288058 MsG0780039905.01.T01:CDS 40.0%
CAAATGCTAGATCTTGAAGC+AGG - Chr7:70291045-70291064 MsG0780039905.01.T01:intron 40.0%
CACATACACAAGACAAACCT+CGG + Chr7:70289017-70289036 None:intergenic 40.0%
CAGCACTTCAACACTCTTAA+AGG - Chr7:70289112-70289131 MsG0780039905.01.T01:intron 40.0%
CCACAATGCTTAGACAAGTT+TGG + Chr7:70290506-70290525 None:intergenic 40.0%
CCACTATATTCTGTGGTCAT+AGG - Chr7:70288529-70288548 MsG0780039905.01.T01:intron 40.0%
CCTATGACCACAGAATATAG+TGG + Chr7:70288532-70288551 None:intergenic 40.0%
CGTGTGAGAAGTTTGTATGA+GGG + Chr7:70292241-70292260 None:intergenic 40.0%
CTACAATTAGGAAGGGAAAC+AGG - Chr7:70291613-70291632 MsG0780039905.01.T01:intron 40.0%
CTAGTTGTGTAAGGTCTTCA+AGG + Chr7:70292210-70292229 None:intergenic 40.0%
CTGTTTCCCTTCCTAATTGT+AGG + Chr7:70291615-70291634 None:intergenic 40.0%
GAAAATATGCAAGGAAGCTC+GGG + Chr7:70290631-70290650 None:intergenic 40.0%
GATATATACGTTTGCACGTG+TGG + Chr7:70289645-70289664 None:intergenic 40.0%
GCAAGCATTCTTCCTGAAAA+TGG + Chr7:70289433-70289452 None:intergenic 40.0%
GCAATTGAACATTCGGTTCA+CGG + Chr7:70289256-70289275 None:intergenic 40.0%
GCCATGTGTGATATCATCAA+GGG - Chr7:70292390-70292409 MsG0780039905.01.T01:five_prime_UTR 40.0%
GCTGTTCGTAGAATTTCACA+AGG - Chr7:70288027-70288046 MsG0780039905.01.T01:CDS 40.0%
GTCATCCATTTCTTCCCAAA+TGG - Chr7:70290176-70290195 MsG0780039905.01.T01:intron 40.0%
TAAAGTTAAACAGCCTGGGT+AGG - Chr7:70290134-70290153 MsG0780039905.01.T01:intron 40.0%
TCAGGCAGGTTTACTAAAGT+TGG - Chr7:70292600-70292619 MsG0780039905.01.T01:five_prime_UTR 40.0%
TCGAAAATGGATGATAGAGG+TGG - Chr7:70287994-70288013 MsG0780039905.01.T01:exon 40.0%
TCGTGTGAGAAGTTTGTATG+AGG + Chr7:70292242-70292261 None:intergenic 40.0%
TCTAAAAGGATACATAGGGG+AGG - Chr7:70291118-70291137 MsG0780039905.01.T01:intron 40.0%
TGAGTTTGTGACAGGATCAA+CGG - Chr7:70288981-70289000 MsG0780039905.01.T01:intron 40.0%
TGCAGTATCATAATTCAGGC+AGG - Chr7:70292586-70292605 MsG0780039905.01.T01:five_prime_UTR 40.0%
TGGCCCAAATTCTTCTATCA+TGG + Chr7:70290307-70290326 None:intergenic 40.0%
TGTATTTCACGTCATGAAGC+TGG + Chr7:70290422-70290441 None:intergenic 40.0%
TTTCCTTGACAGTTAAGCCA+CGG - Chr7:70291506-70291525 MsG0780039905.01.T01:intron 40.0%
TTTGAAAGACCAGAACGTGT+TGG - Chr7:70291174-70291193 MsG0780039905.01.T01:CDS 40.0%
! AAGAAAGATCTGGAACAGGT+TGG + Chr7:70287770-70287789 None:intergenic 40.0%
! ACACCTTCCATTAGAAGTGT+CGG - Chr7:70288730-70288749 MsG0780039905.01.T01:intron 40.0%
! ACATGGCTTGAAGTGTTTGA+TGG + Chr7:70289588-70289607 None:intergenic 40.0%
! ACCCTTGATGATATCACACA+TGG + Chr7:70292394-70292413 None:intergenic 40.0%
! AGAAAGATCTGGAACAGGTT+GGG + Chr7:70287769-70287788 None:intergenic 40.0%
! AGGGGAGGCATATATATGTA+CGG - Chr7:70291133-70291152 MsG0780039905.01.T01:intron 40.0%
! CCAAACTTGTCTAAGCATTG+TGG - Chr7:70290503-70290522 MsG0780039905.01.T01:CDS 40.0%
! GTTGGGATTGTAGATTTTCC+CGG + Chr7:70287752-70287771 None:intergenic 40.0%
! TGGGGCTTATGTCATTTGAT+TGG + Chr7:70291207-70291226 None:intergenic 40.0%
! TTGGGATTGTAGATTTTCCC+GGG + Chr7:70287751-70287770 None:intergenic 40.0%
!! AACAAAGTGTTGGCTCATTG+TGG - Chr7:70288787-70288806 MsG0780039905.01.T01:intron 40.0%
!! AATAGCACCGACACTTCTAA+TGG + Chr7:70288740-70288759 None:intergenic 40.0%
!! GTGCTATTTAGTAACCGAGA+AGG - Chr7:70288752-70288771 MsG0780039905.01.T01:intron 40.0%
!! TCTGTGGTCATAGGAGTATT+TGG - Chr7:70288538-70288557 MsG0780039905.01.T01:intron 40.0%
AAATGCTGAGATTCCTCAGC+AGG - Chr7:70290562-70290581 MsG0780039905.01.T01:intron 45.0%
AACGCGTACCATTCATCTTC+CGG - Chr7:70288063-70288082 MsG0780039905.01.T01:CDS 45.0%
ACACCGATGTTTCACATGGT+TGG - Chr7:70289288-70289307 MsG0780039905.01.T01:CDS 45.0%
ACACGTGTCCTTGTCAGATA+CGG + Chr7:70288670-70288689 None:intergenic 45.0%
AGGAAGGGAAACAGGAAGTT+TGG - Chr7:70291621-70291640 MsG0780039905.01.T01:intron 45.0%
ATATCACACATGGCTCACCT+TGG + Chr7:70292384-70292403 None:intergenic 45.0%
ATGGCTTGATTTCAGAGCAG+TGG - Chr7:70289760-70289779 MsG0780039905.01.T01:intron 45.0%
CAAGCTAGTGGTGAATCTAG+TGG - Chr7:70288479-70288498 MsG0780039905.01.T01:intron 45.0%
CACCGATGTTTCACATGGTT+GGG - Chr7:70289289-70289308 MsG0780039905.01.T01:CDS 45.0%
CATGACACCGATGTTTCACA+TGG - Chr7:70289284-70289303 MsG0780039905.01.T01:CDS 45.0%
GAAGTTCTTTCTCCAGCTGA+CGG + Chr7:70292186-70292205 None:intergenic 45.0%
GGGATAAGACTCGAACAAAG+AGG + Chr7:70290611-70290630 None:intergenic 45.0%
GTGAATTGAATCGAATGCGG+AGG + Chr7:70287823-70287842 None:intergenic 45.0%
GTGTGATATCATCAAGGGTC+TGG - Chr7:70292395-70292414 MsG0780039905.01.T01:five_prime_UTR 45.0%
GTTACAGCTGAGTTTGTGAC+AGG - Chr7:70288973-70288992 MsG0780039905.01.T01:intron 45.0%
GTTTGAACGGACAGTTCTTG+AGG + Chr7:70290882-70290901 None:intergenic 45.0%
TAACACCAGCAACCGCAAAT+GGG + Chr7:70291005-70291024 None:intergenic 45.0%
TCAGAGCAGTGGAAAGACAT+GGG - Chr7:70289771-70289790 MsG0780039905.01.T01:intron 45.0%
TCGAATGCGGAGGAAAAAAG+AGG + Chr7:70287813-70287832 None:intergenic 45.0%
TGATATCATCAAGGGTCTGG+AGG - Chr7:70292398-70292417 MsG0780039905.01.T01:five_prime_UTR 45.0%
TTAACACCAGCAACCGCAAA+TGG + Chr7:70291006-70291025 None:intergenic 45.0%
TTCAGAGCAGTGGAAAGACA+TGG - Chr7:70289770-70289789 MsG0780039905.01.T01:intron 45.0%
TTCAGGAAGAATGCTTGCAG+AGG - Chr7:70289435-70289454 MsG0780039905.01.T01:intron 45.0%
! GGGGAGGCATATATATGTAC+GGG - Chr7:70291134-70291153 MsG0780039905.01.T01:intron 45.0%
! GGGTGGTGGTTACATATCAT+TGG - Chr7:70289914-70289933 MsG0780039905.01.T01:intron 45.0%
! GGTTTAGAACCAACACGTTC+TGG + Chr7:70291186-70291205 None:intergenic 45.0%
! GTGGAAGAAAGATCTGGAAC+AGG + Chr7:70287774-70287793 None:intergenic 45.0%
! TCAAGATCTTTTGCGGAAGC+AGG - Chr7:70290954-70290973 MsG0780039905.01.T01:intron 45.0%
! TCAAGCTGATGGACAATCAG+TGG - Chr7:70291954-70291973 MsG0780039905.01.T01:intron 45.0%
AAGAGACTACCTGGTGCTCA+GGG + Chr7:70289499-70289518 None:intergenic 50.0%
ACAGGATCAACGGCATGGAT+TGG - Chr7:70288991-70289010 MsG0780039905.01.T01:intron 50.0%
AGGAAGGAGTTCGTTCAGTG+TGG - Chr7:70290974-70290993 MsG0780039905.01.T01:intron 50.0%
ATCCATGTATGACGCGTGCA+TGG + Chr7:70291984-70292003 None:intergenic 50.0%
ATGCATATCATTGGCAGGGG+TGG - Chr7:70289897-70289916 MsG0780039905.01.T01:intron 50.0%
CCAGCAATACATCCTCCAAC+AGG + Chr7:70292442-70292461 None:intergenic 50.0%
CCTCATTTGAGTGCCTAGAG+AGG - Chr7:70290054-70290073 MsG0780039905.01.T01:intron 50.0%
CCTCTCTAGGCACTCAAATG+AGG + Chr7:70290057-70290076 None:intergenic 50.0%
CCTGTTGGAGGATGTATTGC+TGG - Chr7:70292439-70292458 MsG0780039905.01.T01:five_prime_UTR 50.0%
GGAAGGAGTTCGTTCAGTGT+GGG - Chr7:70290975-70290994 MsG0780039905.01.T01:intron 50.0%
TGTCCGTGGCTTAACTGTCA+AGG + Chr7:70291512-70291531 None:intergenic 50.0%
TTCCATGCACGCGTCATACA+TGG - Chr7:70291979-70291998 MsG0780039905.01.T01:intron 50.0%
TTGTGACAGGATCAACGGCA+TGG - Chr7:70288986-70289005 MsG0780039905.01.T01:intron 50.0%
! CACTGCGATTTTCCAGTTCG+CGG - Chr7:70287884-70287903 MsG0780039905.01.T01:three_prime_UTR 50.0%
! GATCTTTTGCGGAAGCAGGA+AGG - Chr7:70290958-70290977 MsG0780039905.01.T01:intron 50.0%
! GCACCGACACTTCTAATGGA+AGG + Chr7:70288736-70288755 None:intergenic 50.0%
! GTCAGGGGAGTCTGAAATGT+AGG - Chr7:70292472-70292491 MsG0780039905.01.T01:five_prime_UTR 50.0%
! TAGTTCTATCCCTGAGCACC+AGG - Chr7:70289487-70289506 MsG0780039905.01.T01:intron 50.0%
! TGCTGGCTGACATACAGTCA+GGG - Chr7:70292456-70292475 MsG0780039905.01.T01:five_prime_UTR 50.0%
! TGGTATACATGAAGGAGCGC+AGG - Chr7:70287529-70287548 MsG0780039905.01.T01:three_prime_UTR 50.0%
! TTGCTGGCTGACATACAGTC+AGG - Chr7:70292455-70292474 MsG0780039905.01.T01:five_prime_UTR 50.0%
!! AGTGTGGGAGTACCCATTTG+CGG - Chr7:70290990-70291009 MsG0780039905.01.T01:intron 50.0%
AGCAGTGGAAAGACATGGGC+TGG - Chr7:70289775-70289794 MsG0780039905.01.T01:intron 55.0%
AGTTAAGCCACGGACACTGG+TGG - Chr7:70291516-70291535 MsG0780039905.01.T01:intron 55.0%
CATATCATTGGCAGGGGTGG+TGG - Chr7:70289900-70289919 MsG0780039905.01.T01:intron 55.0%
GAAATCTACACGCCGTCAGC+TGG - Chr7:70292171-70292190 MsG0780039905.01.T01:intron 55.0%
GAAGAGACTACCTGGTGCTC+AGG + Chr7:70289500-70289519 None:intergenic 55.0%
GACAGTTAAGCCACGGACAC+TGG - Chr7:70291513-70291532 MsG0780039905.01.T01:intron 55.0%
GAGTACCCATTTGCGGTTGC+TGG - Chr7:70290997-70291016 MsG0780039905.01.T01:intron 55.0%
GCTGGCTGACATACAGTCAG+GGG - Chr7:70292457-70292476 MsG0780039905.01.T01:five_prime_UTR 55.0%
GTTAAGCCACGGACACTGGT+GGG - Chr7:70291517-70291536 MsG0780039905.01.T01:intron 55.0%
TGTCGGCACCGTATCTGACA+AGG - Chr7:70288659-70288678 MsG0780039905.01.T01:intron 55.0%
! GATTTTCCAGTTCGCGGTCG+TGG - Chr7:70287890-70287909 MsG0780039905.01.T01:three_prime_UTR 55.0%
!! GGAAAGACATGGGCTGGCAA+GGG - Chr7:70289781-70289800 MsG0780039905.01.T01:intron 55.0%
!! TGGAAAGACATGGGCTGGCA+AGG - Chr7:70289780-70289799 MsG0780039905.01.T01:intron 55.0%
TTTCCAGTTCGCGGTCGTGG+TGG - Chr7:70287893-70287912 MsG0780039905.01.T01:three_prime_UTR 60.0%
!! AGACATGGGCTGGCAAGGGA+AGG - Chr7:70289785-70289804 MsG0780039905.01.T01:intron 60.0%
!! TCAACGGCATGGATTGGCCG+AGG - Chr7:70288997-70289016 MsG0780039905.01.T01:intron 60.0%
GTTGCTCCCACCAGTGTCCG+TGG + Chr7:70291526-70291545 None:intergenic 65.0%
TCACCACCACGACCGCGAAC+TGG + Chr7:70287899-70287918 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 70287489 70292770 70287489 ID=MsG0780039905.01;Name=MsG0780039905.01
Chr7 mRNA 70287489 70292770 70287489 ID=MsG0780039905.01.T01;Parent=MsG0780039905.01;Name=MsG0780039905.01.T01;_AED=0.40;_eAED=0.40;_QI=511|0.85|1|1|1|1|8|506|250
Chr7 exon 70287489 70288096 70287489 ID=MsG0780039905.01.T01:exon:13139;Parent=MsG0780039905.01.T01
Chr7 exon 70288250 70288344 70288250 ID=MsG0780039905.01.T01:exon:13138;Parent=MsG0780039905.01.T01
Chr7 exon 70289193 70289313 70289193 ID=MsG0780039905.01.T01:exon:13137;Parent=MsG0780039905.01.T01
Chr7 exon 70290291 70290345 70290291 ID=MsG0780039905.01.T01:exon:13136;Parent=MsG0780039905.01.T01
Chr7 exon 70290433 70290548 70290433 ID=MsG0780039905.01.T01:exon:13135;Parent=MsG0780039905.01.T01
Chr7 exon 70290751 70290819 70290751 ID=MsG0780039905.01.T01:exon:13134;Parent=MsG0780039905.01.T01
Chr7 exon 70291170 70291279 70291170 ID=MsG0780039905.01.T01:exon:13133;Parent=MsG0780039905.01.T01
Chr7 exon 70292175 70292770 70292175 ID=MsG0780039905.01.T01:exon:13132;Parent=MsG0780039905.01.T01
Chr7 five_prime_UTR 70292260 70292770 70292260 ID=MsG0780039905.01.T01:five_prime_utr;Parent=MsG0780039905.01.T01
Chr7 CDS 70292175 70292259 70292175 ID=MsG0780039905.01.T01:cds;Parent=MsG0780039905.01.T01
Chr7 CDS 70291170 70291279 70291170 ID=MsG0780039905.01.T01:cds;Parent=MsG0780039905.01.T01
Chr7 CDS 70290751 70290819 70290751 ID=MsG0780039905.01.T01:cds;Parent=MsG0780039905.01.T01
Chr7 CDS 70290433 70290548 70290433 ID=MsG0780039905.01.T01:cds;Parent=MsG0780039905.01.T01
Chr7 CDS 70290291 70290345 70290291 ID=MsG0780039905.01.T01:cds;Parent=MsG0780039905.01.T01
Chr7 CDS 70289193 70289313 70289193 ID=MsG0780039905.01.T01:cds;Parent=MsG0780039905.01.T01
Chr7 CDS 70288250 70288344 70288250 ID=MsG0780039905.01.T01:cds;Parent=MsG0780039905.01.T01
Chr7 CDS 70287995 70288096 70287995 ID=MsG0780039905.01.T01:cds;Parent=MsG0780039905.01.T01
Chr7 three_prime_UTR 70287489 70287994 70287489 ID=MsG0780039905.01.T01:three_prime_utr;Parent=MsG0780039905.01.T01
Gene Sequence

>MsG0780039905.01.T01

ATGGATGATAGAGGTGGTTCTTTCGTCGCTGTTCGTAGAATTTCACAAGGTCTTGATCGTGGCAACGCGTACCATTCATCTTCCGCTGAGTTTGTGACAGGATCAACGGCATGGATTGGCCGAGGTTTGTCTTGTGTATGTGCACAGAGAAGAGAGAGCGATGCTCGACTCTCTTTTGATTTAACTCCATACCAGGAAGAATGCTTGCAGAGGCTTCAGAGTCGTATAGATGTTCCATATGATAGTTCTATCCCTGAGCACCAGGAATCCTTAAGGGCTTTATGGAATGCTGCATTTCCTGAAGAAGAACTCAATGGCTTGATTTCAGAGCAGTGGAAAGACATGGGCTGGCAAGGGAAGGATCCATCAACAGATTTTAGGGGTGGTGGTTACATATCATTGGAGAATTTGCTGTTTTTTGCCAGGAATTTTCCGAAATCTTTTCAAGATCTTTTGCGGAAGCAGGAAGGAGTTCGTTCAGTGTGGGAGTACCCATTTGCGGTTGCTGGTGTTAACATTACATTCATGCTTATTCAAATGCTAGATCTTGAAGCAGAAAATGAGTCGGCCTTTGATCTTCTCTATTGCATAACATTCAAGCTGATGGACAATCAGTGGCTTTCCATGCACGCGTCATACATGGATTTTAATACAGTGATGAAATCTACACGCCGTCAGCTGGAGAAAGAACTTCTCCTTGAAGACCTTACACAACTAGAAGATGTACCCTCATACAAACTTCTCACACGATAG
Protein sequence

>MsG0780039905.01.T01

MDDRGGSFVAVRRISQGLDRGNAYHSSSAEFVTGSTAWIGRGLSCVCAQRRESDARLSFDLTPYQEECLQRLQSRIDVPYDSSIPEHQESLRALWNAAFPEEELNGLISEQWKDMGWQGKDPSTDFRGGGYISLENLLFFARNFPKSFQDLLRKQEGVRSVWEYPFAVAGVNITFMLIQMLDLEAENESAFDLLYCITFKLMDNQWLSMHASYMDFNTVMKSTRRQLEKELLLEDLTQLEDVPSYKLLTR*