AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025235.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025235.01.T01 MTR_5g021410 99.142 233 2 0 1 233 1 233 6.52e-171 470
MsG0580025235.01.T01 MTR_5g021410 98.837 172 2 0 1 172 1 172 2.28e-123 347
MsG0580025235.01.T01 MTR_8g076260 74.486 243 50 3 1 233 1 241 1.58e-121 345
MsG0580025235.01.T01 MTR_5g021410 98.693 153 2 0 1 153 1 153 4.87e-108 308
MsG0580025235.01.T01 MTR_3g117390 78.261 184 40 0 50 233 43 226 8.32e-103 297
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025235.01.T01 AT2G16460 71.366 227 65 0 7 233 4 230 2.20e-110 317
MsG0580025235.01.T01 AT3G51090 65.339 251 69 2 1 233 48 298 1.94e-106 309
MsG0580025235.01.T01 AT3G51090 60.377 212 66 2 1 194 48 259 4.81e-78 236
MsG0580025235.01.T01 AT2G16460 64.881 168 59 0 7 174 4 171 2.88e-68 207
MsG0580025235.01.T01 AT2G35070 27.326 172 79 3 58 229 28 153 3.05e-12 63.2
MsG0580025235.01.T01 AT2G35070 27.326 172 79 3 58 229 28 153 3.05e-12 63.2

Find 74 sgRNAs with CRISPR-Local

Find 357 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAGGAAATCCATGCTTTA+AGG 0.122064 5:-15681005 MsG0580025235.01.T01:intron
ATTGCCTCAGCTTGCTTTAA+AGG 0.139852 5:+15684294 None:intergenic
GTACTTTATCACATCATATT+TGG 0.179302 5:+15680966 None:intergenic
CGAAATTGAAGGTGAAAATT+TGG 0.217342 5:+15684933 None:intergenic
TGGCCGCTGTGGCGGCTTGC+CGG 0.234576 5:-15685026 MsG0580025235.01.T01:CDS
TTTGAGATATGTAATGAATA+TGG 0.237720 5:+15680715 None:intergenic
CTCTATCAAGTTTGTTAGTC+AGG 0.294634 5:+15681134 None:intergenic
AATTCCGGGGTTGGTTTAAC+TGG 0.298466 5:-15684982 MsG0580025235.01.T01:CDS
GTGGCGGCTTGCCGGCGATT+GGG 0.303722 5:-15685018 MsG0580025235.01.T01:CDS
GGGAGATTGAGGACCAATTC+CGG 0.327565 5:-15684997 MsG0580025235.01.T01:CDS
GGAGATTGAGGACCAATTCC+GGG 0.359811 5:-15684996 MsG0580025235.01.T01:CDS
AGTTAAACCAACCCCGGAAT+TGG 0.368913 5:+15684984 None:intergenic
TTGAGATATGTAATGAATAT+GGG 0.381512 5:+15680716 None:intergenic
GGTTTCCATTAGACTTCAAA+TGG 0.386815 5:-15680757 MsG0580025235.01.T01:three_prime_UTR
ACTGTAAGTGCAGGAGGATA+AGG 0.391252 5:-15681192 MsG0580025235.01.T01:intron
AAGGCCCATTTGAAGTCTAA+TGG 0.399026 5:+15680752 None:intergenic
TGTGGCGGCTTGCCGGCGAT+TGG 0.400407 5:-15685019 MsG0580025235.01.T01:CDS
TTGTTGTTGTGTAGGTTAAG+AGG 0.404187 5:-15684335 MsG0580025235.01.T01:intron
TCTCAGAAAACCACATCAAC+TGG 0.416473 5:+15680525 None:intergenic
CCATGCTTTAAGGGCTCAGC+TGG 0.418734 5:-15680995 MsG0580025235.01.T01:CDS
AAGCAAGCTGAGGCAATAAC+TGG 0.420014 5:-15684288 MsG0580025235.01.T01:CDS
TCAGGAAATCCATGCTTTAA+GGG 0.423038 5:-15681004 MsG0580025235.01.T01:intron
AGGAAACTAGAGAAGCTGTT+TGG 0.457219 5:-15680839 MsG0580025235.01.T01:three_prime_UTR
CTGTAAGTGCAGGAGGATAA+GGG 0.466625 5:-15681191 MsG0580025235.01.T01:intron
TGGCGGCTTGCCGGCGATTG+GGG 0.472945 5:-15685017 MsG0580025235.01.T01:CDS
AAACAATTGCATGGCAGTGC+TGG 0.492277 5:-15680792 MsG0580025235.01.T01:three_prime_UTR
GTGTAGGTTAAGAGGCTTGA+GGG 0.492293 5:-15684327 MsG0580025235.01.T01:intron
TTGAGGACCAATTCCGGGGT+TGG 0.493555 5:-15684991 MsG0580025235.01.T01:CDS
GCCGGCGATTGGGGAGATTG+AGG 0.494997 5:-15685008 MsG0580025235.01.T01:CDS
GTTGGATTTAAACCTTGAAA+GGG 0.496533 5:-15681311 MsG0580025235.01.T01:CDS
GGTTGGATTTAAACCTTGAA+AGG 0.499726 5:-15681312 MsG0580025235.01.T01:CDS
TTCTACTCCACCAGTTGATG+TGG 0.501657 5:-15680535 MsG0580025235.01.T01:three_prime_UTR
TAAGCTTCTCAGTTTCGTGT+TGG 0.504715 5:+15681501 None:intergenic
GAATCAAATGGCCGCTGTGG+CGG 0.509153 5:-15685034 None:intergenic
CTTGTTTCAATATCTGCTGT+TGG 0.511375 5:-15680931 MsG0580025235.01.T01:CDS
GGAGAATGTATCTCGGTCAT+TGG 0.516080 5:-15684235 MsG0580025235.01.T01:CDS
CACTGACAAAATTGAGGTGA+AGG 0.518816 5:-15680859 MsG0580025235.01.T01:three_prime_UTR
GAGATAGATAAAGTCACGGC+TGG 0.523910 5:-15681340 MsG0580025235.01.T01:CDS
TCCTCAATCTCCCCAATCGC+CGG 0.535142 5:+15685007 None:intergenic
GATTAACACTGACAAAATTG+AGG 0.541270 5:-15680865 MsG0580025235.01.T01:three_prime_UTR
TCGCCGGCAAGCCGCCACAG+CGG 0.543052 5:+15685023 None:intergenic
CAGTGCTGGTGGAGCTGAAG+TGG 0.543924 5:-15680778 MsG0580025235.01.T01:three_prime_UTR
CCAGCTGAGCCCTTAAAGCA+TGG 0.549664 5:+15680995 None:intergenic
TGAGGTGTTGAATGATAGCT+TGG 0.550034 5:-15684256 MsG0580025235.01.T01:CDS
CGTGTTGGAGCAGAGAAAAG+TGG 0.557662 5:+15681516 None:intergenic
CAATTGCATGGCAGTGCTGG+TGG 0.559379 5:-15680789 MsG0580025235.01.T01:three_prime_UTR
AGTCACGGCTGGACAGCGGT+TGG 0.560017 5:-15681329 MsG0580025235.01.T01:CDS
GTTTCCATTAGACTTCAAAT+GGG 0.563495 5:-15680756 MsG0580025235.01.T01:three_prime_UTR
AGAAGATGCGTAGTGAATTG+AGG 0.566616 5:-15681466 MsG0580025235.01.T01:intron
AGCAAGGCAAGTAAATGAGT+TGG 0.574372 5:+15680659 None:intergenic
TTACATCAATATACGAAGAA+CGG 0.580904 5:+15680903 None:intergenic
TACATGGAACCCGAAATTGA+AGG 0.585057 5:+15684922 None:intergenic
GTTAAGAGGCTTGAGGGACA+AGG 0.590914 5:-15684321 MsG0580025235.01.T01:CDS
TTGGAATCAAATGGCCGCTG+TGG 0.593151 5:-15685037 None:intergenic
TTGGATTTAAACCTTGAAAG+GGG 0.608817 5:-15681310 MsG0580025235.01.T01:CDS
GATGTGATAAAGTACTGCAT+AGG 0.611784 5:-15680958 MsG0580025235.01.T01:CDS
TAATTATACAGTATACACAT+TGG 0.612391 5:-15680576 MsG0580025235.01.T01:three_prime_UTR
AACAGAAGTGCAGAGCTCAC+AGG 0.617774 5:-15683976 MsG0580025235.01.T01:intron
TGGATTTAAACCTTGAAAGG+GGG 0.618514 5:-15681309 MsG0580025235.01.T01:intron
GAGATTGAGGACCAATTCCG+GGG 0.623639 5:-15684995 MsG0580025235.01.T01:CDS
CAGAAAACCACATCAACTGG+TGG 0.627598 5:+15680528 None:intergenic
TTGGTAAATCAAATGGACAA+CGG 0.627930 5:-15684888 MsG0580025235.01.T01:CDS
ATAGCTTGGAGAATGTATCT+CGG 0.632775 5:-15684242 MsG0580025235.01.T01:CDS
AATAACTGGTGCTATAACTG+AGG 0.638529 5:-15684274 MsG0580025235.01.T01:CDS
CTGTAAGAGAAACAATTGCA+TGG 0.642151 5:-15680801 MsG0580025235.01.T01:three_prime_UTR
ATCAAAAGAAGAAATGCAGA+GGG 0.642450 5:-15684211 MsG0580025235.01.T01:intron
TATCAAAAGAAGAAATGCAG+AGG 0.651897 5:-15684212 MsG0580025235.01.T01:CDS
AAAACCAGTTAAACCAACCC+CGG 0.659053 5:+15684978 None:intergenic
TGTGTAGGTTAAGAGGCTTG+AGG 0.667242 5:-15684328 MsG0580025235.01.T01:intron
ATAAAGTCACGGCTGGACAG+CGG 0.681023 5:-15681333 MsG0580025235.01.T01:CDS
AGTGCCTTTAAAGCAAGCTG+AGG 0.684635 5:-15684298 MsG0580025235.01.T01:CDS
GTATGAGATAGATAAAGTCA+CGG 0.685262 5:-15681344 MsG0580025235.01.T01:CDS
AGTACTCACAAACAACAGCA+AGG 0.692551 5:+15680643 None:intergenic
TCAATATACGAAGAACGGCG+AGG 0.726236 5:+15680908 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTAATTACAC+AGG - Chr5:15684834-15684853 MsG0580025235.01.T01:intron 10.0%
!! AATGAAAATATTATAATGCA+GGG - Chr5:15683977-15683996 MsG0580025235.01.T01:CDS 15.0%
!! AATTGTAAATAAGTTTCAAA+AGG + Chr5:15681340-15681359 None:intergenic 15.0%
!! ATTGTAAATAAGTTTCAAAA+GGG + Chr5:15681339-15681358 None:intergenic 15.0%
!! GTATTATAACAATATATAAC+TGG + Chr5:15683500-15683519 None:intergenic 15.0%
!! TAATGAAAATATTATAATGC+AGG - Chr5:15683976-15683995 MsG0580025235.01.T01:intron 15.0%
!! TATATTCTCTTAAATAAGTT+TGG - Chr5:15683783-15683802 MsG0580025235.01.T01:intron 15.0%
!! TTAATATTAATACAATGTTC+AGG - Chr5:15684497-15684516 MsG0580025235.01.T01:intron 15.0%
!!! AATTAAAATCTGCATTTTTT+TGG - Chr5:15681030-15681049 MsG0580025235.01.T01:intron 15.0%
!!! ATATGGTAATGAAATTTTAA+AGG - Chr5:15681628-15681647 MsG0580025235.01.T01:intron 15.0%
!!! ATGTAATAATGTTTTTTTGA+AGG - Chr5:15681434-15681453 MsG0580025235.01.T01:intron 15.0%
!!! TTTTAAAATTAAAACCAAAC+CGG + Chr5:15680895-15680914 None:intergenic 15.0%
!! AAAAAAAAAGGAAGAAAGAA+TGG - Chr5:15683358-15683377 MsG0580025235.01.T01:intron 20.0%
!! AAATATTAAAAGTAGGGAAA+AGG + Chr5:15682962-15682981 None:intergenic 20.0%
!! AACATTCTAATTCTATTGTT+TGG - Chr5:15682868-15682887 MsG0580025235.01.T01:intron 20.0%
!! AGTGTCAAAATATTAAAAGT+AGG + Chr5:15682969-15682988 None:intergenic 20.0%
!! GTGTCAAAATATTAAAAGTA+GGG + Chr5:15682968-15682987 None:intergenic 20.0%
!! TAACAATATATAACTGGATT+TGG + Chr5:15683494-15683513 None:intergenic 20.0%
!! TAATTATACAGTATACACAT+TGG - Chr5:15684943-15684962 MsG0580025235.01.T01:CDS 20.0%
!! TCAAACATTAACAATCATAA+TGG + Chr5:15684308-15684327 None:intergenic 20.0%
!! TGTTAATATTTGTCCTTTAT+CGG - Chr5:15683239-15683258 MsG0580025235.01.T01:intron 20.0%
!! TTGAGATATGTAATGAATAT+GGG + Chr5:15684806-15684825 None:intergenic 20.0%
!!! AAATTTTAAAGGTTGAATGA+AGG - Chr5:15681639-15681658 MsG0580025235.01.T01:intron 20.0%
!!! AATTTTAAAGGTTGAATGAA+GGG - Chr5:15681640-15681659 MsG0580025235.01.T01:intron 20.0%
!!! ATGCTATTTTTAAAATCTTC+TGG + Chr5:15682307-15682326 None:intergenic 20.0%
!!! GATTTTCAAAAACACATAAA+CGG - Chr5:15682357-15682376 MsG0580025235.01.T01:intron 20.0%
!!! TTTGAGATATGTAATGAATA+TGG + Chr5:15684807-15684826 None:intergenic 20.0%
!!! TTTGGTTATATTTTTCTGAT+TGG + Chr5:15681888-15681907 None:intergenic 20.0%
!!! TTTTCAGGTAATAAACTTTA+TGG - Chr5:15684127-15684146 MsG0580025235.01.T01:intron 20.0%
! AAATTAGTAAAGCTCTGTTT+GGG - Chr5:15683304-15683323 MsG0580025235.01.T01:intron 25.0%
! AAGAGAAAATGTGAATTACA+AGG + Chr5:15680680-15680699 None:intergenic 25.0%
! AGAGAAAATGTGAATTACAA+GGG + Chr5:15680679-15680698 None:intergenic 25.0%
! ATACAAAATCCTCCTAATTT+GGG - Chr5:15683417-15683436 MsG0580025235.01.T01:intron 25.0%
! CAGTTGTACAATAAAAGAAA+GGG + Chr5:15683020-15683039 None:intergenic 25.0%
! GGCATATATTTATCCAAATA+TGG - Chr5:15682108-15682127 MsG0580025235.01.T01:intron 25.0%
! GTACTTTATCACATCATATT+TGG + Chr5:15684556-15684575 None:intergenic 25.0%
! GTATGATAAGAAATGGAAAA+AGG - Chr5:15683198-15683217 MsG0580025235.01.T01:intron 25.0%
! TAAAAAATTGTATTGGACGA+GGG - Chr5:15683445-15683464 MsG0580025235.01.T01:intron 25.0%
! TAATTGCAGGAAAAAAATCA+AGG + Chr5:15682027-15682046 None:intergenic 25.0%
! TATGGGCTTGAAAAAAAAAA+AGG + Chr5:15684789-15684808 None:intergenic 25.0%
! TGAAACTTATTTACAATTCC+AGG - Chr5:15681342-15681361 MsG0580025235.01.T01:CDS 25.0%
! TGCAAAAATAGTGTTATATG+TGG - Chr5:15681577-15681596 MsG0580025235.01.T01:intron 25.0%
! TTACATCAATATACGAAGAA+CGG + Chr5:15684619-15684638 None:intergenic 25.0%
! TTCTCTTAAATAAGTTTGGT+TGG - Chr5:15683787-15683806 MsG0580025235.01.T01:intron 25.0%
! TTTCTTCATAACTATTCCAA+GGG + Chr5:15681145-15681164 None:intergenic 25.0%
! TTTGTTCTTGAAATTATCTG+TGG - Chr5:15683727-15683746 MsG0580025235.01.T01:intron 25.0%
!! AAATTTTCACCTTCAATTTC+GGG - Chr5:15680588-15680607 MsG0580025235.01.T01:three_prime_UTR 25.0%
!! ATATGAAATTCTAAAGACCA+GGG + Chr5:15683274-15683293 None:intergenic 25.0%
!! CAAATTTTCACCTTCAATTT+CGG - Chr5:15680587-15680606 MsG0580025235.01.T01:three_prime_UTR 25.0%
!! GTAACAGAAATTTAGAACTA+TGG + Chr5:15682652-15682671 None:intergenic 25.0%
!! TAAATAAGTTTGGTTGGTAT+TGG - Chr5:15683793-15683812 MsG0580025235.01.T01:intron 25.0%
!! TTACATAACTTTTTGCATCA+CGG + Chr5:15681420-15681439 None:intergenic 25.0%
!! TTTTCATTATATGACCACAT+CGG + Chr5:15683965-15683984 None:intergenic 25.0%
!!! AACTACTAGTTTCATTTTTC+AGG - Chr5:15684112-15684131 MsG0580025235.01.T01:intron 25.0%
!!! ACAAAGTTAAAATTTTCGAG+CGG - Chr5:15682918-15682937 MsG0580025235.01.T01:intron 25.0%
!!! ATGAAACTAGTAGTTGATAA+AGG + Chr5:15684107-15684126 None:intergenic 25.0%
!!! ATTTCTTGCTGTTTGAATTT+AGG + Chr5:15682260-15682279 None:intergenic 25.0%
!!! GTAAGATATTTTTGCCATTT+TGG + Chr5:15681935-15681954 None:intergenic 25.0%
AAAAGGACTTTGGATTTCAA+AGG + Chr5:15682412-15682431 None:intergenic 30.0%
AATGACAAAGAATGTCTACT+TGG + Chr5:15682831-15682850 None:intergenic 30.0%
ACCAAAACCAGAAAAATACA+TGG + Chr5:15680616-15680635 None:intergenic 30.0%
AGATGATCCATATTCAAACT+CGG - Chr5:15680993-15681012 MsG0580025235.01.T01:CDS 30.0%
ATAGAATGAAAATCCAAGCT+AGG - Chr5:15682087-15682106 MsG0580025235.01.T01:intron 30.0%
ATATTTGTCCTTTATCGGAA+TGG - Chr5:15683244-15683263 MsG0580025235.01.T01:intron 30.0%
ATCAAAAGAAGAAATGCAGA+GGG - Chr5:15681308-15681327 MsG0580025235.01.T01:intron 30.0%
ATCCAAATTCTTTATTCCCT+TGG - Chr5:15681126-15681145 MsG0580025235.01.T01:intron 30.0%
ATTTACAATTCCAGGAATGT+GGG - Chr5:15681350-15681369 MsG0580025235.01.T01:intron 30.0%
CCAGATTGTATGATAAGAAA+TGG - Chr5:15683191-15683210 MsG0580025235.01.T01:intron 30.0%
CCATTTCTTATCATACAATC+TGG + Chr5:15683194-15683213 None:intergenic 30.0%
CGAAATTGAAGGTGAAAATT+TGG + Chr5:15680589-15680608 None:intergenic 30.0%
CGGTTGAATTGTTAAAACAT+TGG + Chr5:15680751-15680770 None:intergenic 30.0%
CTAAAAAATTGTATTGGACG+AGG - Chr5:15683444-15683463 MsG0580025235.01.T01:intron 30.0%
CTAAATTTCTGTTACAGCAA+AGG - Chr5:15682657-15682676 MsG0580025235.01.T01:intron 30.0%
CTTGGAATAGTTATGAAGAA+AGG - Chr5:15681144-15681163 MsG0580025235.01.T01:CDS 30.0%
CTTTCTTCATAACTATTCCA+AGG + Chr5:15681146-15681165 None:intergenic 30.0%
GAAATTAGTAAAGCTCTGTT+TGG - Chr5:15683303-15683322 MsG0580025235.01.T01:intron 30.0%
GATACAAAATCCTCCTAATT+TGG - Chr5:15683416-15683435 MsG0580025235.01.T01:intron 30.0%
GATTAACACTGACAAAATTG+AGG - Chr5:15684654-15684673 MsG0580025235.01.T01:intron 30.0%
GCAGTTGTACAATAAAAGAA+AGG + Chr5:15683021-15683040 None:intergenic 30.0%
GGGGAACTAAAAAATTGTAT+TGG - Chr5:15683438-15683457 MsG0580025235.01.T01:intron 30.0%
GTATGAGATAGATAAAGTCA+CGG - Chr5:15684175-15684194 MsG0580025235.01.T01:intron 30.0%
GTTCCAACTATCTGAATATA+AGG + Chr5:15682579-15682598 None:intergenic 30.0%
GTTGGATTTAAACCTTGAAA+GGG - Chr5:15684208-15684227 MsG0580025235.01.T01:intron 30.0%
GTTTCCATTAGACTTCAAAT+GGG - Chr5:15684763-15684782 MsG0580025235.01.T01:intron 30.0%
TAAGTGACACCAATATCAAA+AGG + Chr5:15683102-15683121 None:intergenic 30.0%
TAATCTTAAACAAACAGCCA+CGG + Chr5:15680974-15680993 None:intergenic 30.0%
TACAAAATCCTCCTAATTTG+GGG - Chr5:15683418-15683437 MsG0580025235.01.T01:intron 30.0%
TATCAAAAGAAGAAATGCAG+AGG - Chr5:15681307-15681326 MsG0580025235.01.T01:intron 30.0%
TATCCAAATATGGTGAGATA+CGG - Chr5:15682118-15682137 MsG0580025235.01.T01:intron 30.0%
TATTTACAATTCCAGGAATG+TGG - Chr5:15681349-15681368 MsG0580025235.01.T01:intron 30.0%
TGTACAATAAAAGAAAGGGA+AGG + Chr5:15683016-15683035 None:intergenic 30.0%
TTAACCTACACAACAACAAA+GGG + Chr5:15681183-15681202 None:intergenic 30.0%
TTACATGTACATCTACTTGT+TGG - Chr5:15682747-15682766 MsG0580025235.01.T01:intron 30.0%
TTACTTTAGCAGTTTGACTA+CGG + Chr5:15680826-15680845 None:intergenic 30.0%
TTATAAGGACAAGGAAAACA+AGG + Chr5:15683898-15683917 None:intergenic 30.0%
TTCCAAGGGAATAAAGAATT+TGG + Chr5:15681131-15681150 None:intergenic 30.0%
TTCTATTTCCTTGTGTTCTT+AGG + Chr5:15681848-15681867 None:intergenic 30.0%
TTGGATTTAAACCTTGAAAG+GGG - Chr5:15684209-15684228 MsG0580025235.01.T01:intron 30.0%
TTGGTAAATCAAATGGACAA+CGG - Chr5:15680631-15680650 MsG0580025235.01.T01:three_prime_UTR 30.0%
TTGTCCTTATAATGTTTCCT+CGG - Chr5:15683906-15683925 MsG0580025235.01.T01:intron 30.0%
TTTCATTATATGACCACATC+GGG + Chr5:15683964-15683983 None:intergenic 30.0%
! AAGATTTAGGACATTATGCA+GGG - Chr5:15683820-15683839 MsG0580025235.01.T01:intron 30.0%
! ATATACGTATTTTCCATCAC+AGG + Chr5:15683766-15683785 None:intergenic 30.0%
! CAGAAATTTAGAACTATGGT+TGG + Chr5:15682648-15682667 None:intergenic 30.0%
! CATATGAAATTCTAAAGACC+AGG + Chr5:15683275-15683294 None:intergenic 30.0%
! GGAGATCTTTTTATTGCATT+TGG + Chr5:15682006-15682025 None:intergenic 30.0%
! TTGCTGAGGAAAATTTTTGT+AGG + Chr5:15681957-15681976 None:intergenic 30.0%
!! ATCCTTCTCATGTTTTTACT+AGG - Chr5:15682799-15682818 MsG0580025235.01.T01:intron 30.0%
!! GTTAGTTTCAGCATTTTGAT+TGG + Chr5:15684363-15684382 None:intergenic 30.0%
!! TCTGATTTGGAATTGTACTT+GGG + Chr5:15682058-15682077 None:intergenic 30.0%
!! TGTACTAATGTTAGCTCTTT+TGG - Chr5:15681463-15681482 MsG0580025235.01.T01:intron 30.0%
!!! ACACTCGCAATTTTTTTTGA+AGG - Chr5:15683577-15683596 MsG0580025235.01.T01:intron 30.0%
!!! TCCATGTATTTTTCTGGTTT+TGG - Chr5:15680612-15680631 MsG0580025235.01.T01:three_prime_UTR 30.0%
!!! TCTGGTTTTGGTAAATCAAA+TGG - Chr5:15680624-15680643 MsG0580025235.01.T01:three_prime_UTR 30.0%
!!! TTTTTTAGTTCCCCCAAATT+AGG + Chr5:15683432-15683451 None:intergenic 30.0%
AACTTTATGGTGCATTGTTC+TGG - Chr5:15684140-15684159 MsG0580025235.01.T01:intron 35.0%
AAGAAAGAATGGAGAGCTTT+GGG - Chr5:15683369-15683388 MsG0580025235.01.T01:intron 35.0%
AAGGAAAGTCGATGAAATCA+AGG + Chr5:15684088-15684107 None:intergenic 35.0%
AAGTAACTTCAGCAGAAAGA+TGG + Chr5:15683848-15683867 None:intergenic 35.0%
ACAAAATCCTCCTAATTTGG+GGG - Chr5:15683419-15683438 MsG0580025235.01.T01:intron 35.0%
ACTTGATCAAAGTCGAAATG+TGG + Chr5:15681912-15681931 None:intergenic 35.0%
ACTTTATGGTGCATTGTTCT+GGG - Chr5:15684141-15684160 MsG0580025235.01.T01:intron 35.0%
AGAACTATGGTTGGATACTA+TGG + Chr5:15682639-15682658 None:intergenic 35.0%
AGCAAAGGAAAACCAAAGAA+AGG - Chr5:15682672-15682691 MsG0580025235.01.T01:intron 35.0%
ATAGCTTGGAGAATGTATCT+CGG - Chr5:15681277-15681296 MsG0580025235.01.T01:intron 35.0%
CAAAATGCCGAGTTTGAATA+TGG + Chr5:15681003-15681022 None:intergenic 35.0%
CAAAGGAAAACCAAAGAAAG+GGG - Chr5:15682674-15682693 MsG0580025235.01.T01:intron 35.0%
CAAGTACAATTCCAAATCAG+AGG - Chr5:15682057-15682076 MsG0580025235.01.T01:intron 35.0%
CACAAGGAAATAGAAGAGAT+TGG - Chr5:15681853-15681872 MsG0580025235.01.T01:intron 35.0%
CCAACTATCTGAATATAAGG+AGG + Chr5:15682576-15682595 None:intergenic 35.0%
CCTCCTTATATTCAGATAGT+TGG - Chr5:15682573-15682592 MsG0580025235.01.T01:intron 35.0%
CTGCTAAAGTAAATGAACTG+TGG - Chr5:15680834-15680853 MsG0580025235.01.T01:three_prime_UTR 35.0%
CTGTAAGAGAAACAATTGCA+TGG - Chr5:15684718-15684737 MsG0580025235.01.T01:intron 35.0%
CTTAACCTACACAACAACAA+AGG + Chr5:15681184-15681203 None:intergenic 35.0%
CTTGTTTCAATATCTGCTGT+TGG - Chr5:15684588-15684607 MsG0580025235.01.T01:intron 35.0%
GACTTGTGATCTTCAAACTA+AGG - Chr5:15683700-15683719 MsG0580025235.01.T01:intron 35.0%
GACTTTGATCAAGTCCAAAA+TGG - Chr5:15681918-15681937 MsG0580025235.01.T01:intron 35.0%
GAGGAAACATTATAAGGACA+AGG + Chr5:15683907-15683926 None:intergenic 35.0%
GCAAAGGAAAACCAAAGAAA+GGG - Chr5:15682673-15682692 MsG0580025235.01.T01:intron 35.0%
GGACTTGTATTGTAAAAGGT+TGG + Chr5:15681821-15681840 None:intergenic 35.0%
GGATAAATATATGCCTAGCT+TGG + Chr5:15682103-15682122 None:intergenic 35.0%
GGGAGAGCTTGAAAAAAAAA+AGG - Chr5:15683346-15683365 MsG0580025235.01.T01:intron 35.0%
GGTTGGATTTAAACCTTGAA+AGG - Chr5:15684207-15684226 MsG0580025235.01.T01:intron 35.0%
GGTTTCCATTAGACTTCAAA+TGG - Chr5:15684762-15684781 MsG0580025235.01.T01:intron 35.0%
TAATGTTTGACTGTAAGTGC+AGG - Chr5:15684318-15684337 MsG0580025235.01.T01:CDS 35.0%
TACAATTCCAAATCAGAGGA+AGG - Chr5:15682061-15682080 MsG0580025235.01.T01:intron 35.0%
TAGATCTTTCTACCAACTTG+AGG - Chr5:15682719-15682738 MsG0580025235.01.T01:intron 35.0%
TCAGGAAATCCATGCTTTAA+GGG - Chr5:15684515-15684534 MsG0580025235.01.T01:intron 35.0%
TGAAATTGAATATGACCCAG+AGG + Chr5:15680792-15680811 None:intergenic 35.0%
TGCCTAGTAAAAACATGAGA+AGG + Chr5:15682804-15682823 None:intergenic 35.0%
TGCTGGACTTGTATTGTAAA+AGG + Chr5:15681825-15681844 None:intergenic 35.0%
TGCTTTAGTGTTGTAGACAT+AGG - Chr5:15681702-15681721 MsG0580025235.01.T01:intron 35.0%
TGGATTTAAACCTTGAAAGG+GGG - Chr5:15684210-15684229 MsG0580025235.01.T01:intron 35.0%
TTAGGTGCATGTGTATGATA+TGG - Chr5:15681611-15681630 MsG0580025235.01.T01:intron 35.0%
TTATTGAAGCAATCCTGTGA+TGG - Chr5:15683750-15683769 MsG0580025235.01.T01:intron 35.0%
TTCAGGAAATCCATGCTTTA+AGG - Chr5:15684514-15684533 MsG0580025235.01.T01:intron 35.0%
TTCAGTAATGCTCAGACAAT+TGG + Chr5:15684256-15684275 None:intergenic 35.0%
TTGTTGGTATGCTACACATT+AGG - Chr5:15682763-15682782 MsG0580025235.01.T01:intron 35.0%
! AAACACTGCCATTTCATTTG+TGG - Chr5:15680913-15680932 MsG0580025235.01.T01:CDS 35.0%
! CAAGATTTAGGACATTATGC+AGG - Chr5:15683819-15683838 MsG0580025235.01.T01:intron 35.0%
! CGATTGATGCCTTTTGATAT+TGG - Chr5:15683090-15683109 MsG0580025235.01.T01:intron 35.0%
! TATGTGGACTTTGATGACTT+AGG - Chr5:15681593-15681612 MsG0580025235.01.T01:intron 35.0%
! TCAAAGTCGAAATGTGGTTT+TGG + Chr5:15681906-15681925 None:intergenic 35.0%
! TTATTCCTCTGAAGGTGAAA+AGG + Chr5:15682429-15682448 None:intergenic 35.0%
! TTGTTGTTGTGTAGGTTAAG+AGG - Chr5:15681184-15681203 MsG0580025235.01.T01:intron 35.0%
!! AATAACTGGTGCTATAACTG+AGG - Chr5:15681245-15681264 MsG0580025235.01.T01:intron 35.0%
!! ATATCAAAAGGCATCAATCG+AGG + Chr5:15683090-15683109 None:intergenic 35.0%
!! CTCTATCAAGTTTGTTAGTC+AGG + Chr5:15684388-15684407 None:intergenic 35.0%
!! CTCTGATTTGGAATTGTACT+TGG + Chr5:15682059-15682078 None:intergenic 35.0%
!! CTGCACTTCTGTTTTGAATT+TGG + Chr5:15681536-15681555 None:intergenic 35.0%
!! CTTCTGTTTTGAATTTGGAC+AGG + Chr5:15681531-15681550 None:intergenic 35.0%
!! GATGTGATAAAGTACTGCAT+AGG - Chr5:15684561-15684580 MsG0580025235.01.T01:intron 35.0%
!! TATTGTGTTGGTCTTGAAGA+TGG + Chr5:15682517-15682536 None:intergenic 35.0%
!! TGGTATTGGTTGCAAGATTT+AGG - Chr5:15683807-15683826 MsG0580025235.01.T01:intron 35.0%
!! TGGTGTCACTTATGCATATA+AGG - Chr5:15683110-15683129 MsG0580025235.01.T01:intron 35.0%
!! TGTTTTGAATTTGGACAGGT+TGG + Chr5:15681527-15681546 None:intergenic 35.0%
!!! TTTTTTGTGTCCCCTTTCTT+TGG + Chr5:15682687-15682706 None:intergenic 35.0%
AAAACCAGTTAAACCAACCC+CGG + Chr5:15680544-15680563 None:intergenic 40.0%
AATGTGAGTGCAAGGAGTAA+TGG - Chr5:15681791-15681810 MsG0580025235.01.T01:intron 40.0%
AGAAGATGCGTAGTGAATTG+AGG - Chr5:15684053-15684072 MsG0580025235.01.T01:intron 40.0%
AGCAAGGCAAGTAAATGAGT+TGG + Chr5:15684863-15684882 None:intergenic 40.0%
AGCAGTTTGACTACGGTTTA+AGG + Chr5:15680819-15680838 None:intergenic 40.0%
AGCATCAGCAGAAATCAAAG+AGG - Chr5:15682322-15682341 MsG0580025235.01.T01:intron 40.0%
AGGAAACTAGAGAAGCTGTT+TGG - Chr5:15684680-15684699 MsG0580025235.01.T01:intron 40.0%
AGGACTTTGGATTTCAAAGG+AGG + Chr5:15682409-15682428 None:intergenic 40.0%
AGTACTCACAAACAACAGCA+AGG + Chr5:15684879-15684898 None:intergenic 40.0%
AGTTTGACTACGGTTTAAGG+CGG + Chr5:15680816-15680835 None:intergenic 40.0%
CAATGAAAATCCCACATTCC+TGG + Chr5:15681363-15681382 None:intergenic 40.0%
CACTGACAAAATTGAGGTGA+AGG - Chr5:15684660-15684679 MsG0580025235.01.T01:intron 40.0%
CATGTAACAAAGCCTCAAGT+TGG + Chr5:15682734-15682753 None:intergenic 40.0%
CTATATGCCTTCCTCTGATT+TGG + Chr5:15682071-15682090 None:intergenic 40.0%
CTATGGTTGGATACTATGGT+TGG + Chr5:15682635-15682654 None:intergenic 40.0%
CTCTCCCATGTCAATAATGA+AGG - Chr5:15682550-15682569 MsG0580025235.01.T01:intron 40.0%
CTGTGGTAAAGACATGTTCA+AGG - Chr5:15680851-15680870 MsG0580025235.01.T01:three_prime_UTR 40.0%
GAAGAAAGAATGGAGAGCTT+TGG - Chr5:15683368-15683387 MsG0580025235.01.T01:intron 40.0%
GAGAATATCCTCTCTAGCAT+GGG + Chr5:15682495-15682514 None:intergenic 40.0%
GAGGCCTTCATTATTGACAT+GGG + Chr5:15682557-15682576 None:intergenic 40.0%
GCAAAGAGTGATAATTCTGG+AGG - Chr5:15683138-15683157 MsG0580025235.01.T01:intron 40.0%
GCATCAGCAGAAATCAAAGA+GGG - Chr5:15682323-15682342 MsG0580025235.01.T01:intron 40.0%
GGAAGGATGATGTATTGTGT+TGG + Chr5:15682529-15682548 None:intergenic 40.0%
GGTGCAAAGAGTGATAATTC+TGG - Chr5:15683135-15683154 MsG0580025235.01.T01:intron 40.0%
GTAATTCTTACCCCCTTTCA+AGG + Chr5:15684223-15684242 None:intergenic 40.0%
GTCACTTATGCATATAAGGC+TGG - Chr5:15683114-15683133 MsG0580025235.01.T01:intron 40.0%
GTTCCGTATCTCACCATATT+TGG + Chr5:15682124-15682143 None:intergenic 40.0%
GTTTAACCGATTGAACTGTC+CGG - Chr5:15680873-15680892 MsG0580025235.01.T01:three_prime_UTR 40.0%
GTTTGTCATGATGTTGTCAC+TGG - Chr5:15683050-15683069 MsG0580025235.01.T01:intron 40.0%
TAAAGCTCTGTTTGGGAGTT+TGG - Chr5:15683311-15683330 MsG0580025235.01.T01:intron 40.0%
TAAGCTTCTCAGTTTCGTGT+TGG + Chr5:15684021-15684040 None:intergenic 40.0%
TACATGGAACCCGAAATTGA+AGG + Chr5:15680600-15680619 None:intergenic 40.0%
TCATTATTGACATGGGAGAG+TGG + Chr5:15682550-15682569 None:intergenic 40.0%
TCTCAGAAAACCACATCAAC+TGG + Chr5:15684997-15685016 None:intergenic 40.0%
TCTGAAGGTGAAAAGGACTT+TGG + Chr5:15682422-15682441 None:intergenic 40.0%
TGCGAATAAATGTGAGTGCA+AGG - Chr5:15681783-15681802 MsG0580025235.01.T01:intron 40.0%
! AAAGTCCTTTTCACCTTCAG+AGG - Chr5:15682421-15682440 MsG0580025235.01.T01:intron 40.0%
! AAGGCCCATTTGAAGTCTAA+TGG + Chr5:15684770-15684789 None:intergenic 40.0%
! ACTTCCAATCTTTGTTTCCG+AGG + Chr5:15682604-15682623 None:intergenic 40.0%
! AGCACCGAGGAAACATTATA+AGG + Chr5:15683913-15683932 None:intergenic 40.0%
! ATTGCCTCAGCTTGCTTTAA+AGG + Chr5:15681228-15681247 None:intergenic 40.0%
! ATTGTATTGGACGAGGGTTT+TGG - Chr5:15683451-15683470 MsG0580025235.01.T01:intron 40.0%
! CATCCGATCTTTTGACCAAA+AGG - Chr5:15681055-15681074 MsG0580025235.01.T01:intron 40.0%
! TCGGGTTCCATGTATTTTTC+TGG - Chr5:15680606-15680625 MsG0580025235.01.T01:three_prime_UTR 40.0%
! TGGCCTTTTGGTCAAAAGAT+CGG + Chr5:15681061-15681080 None:intergenic 40.0%
! TTGTATTGGACGAGGGTTTT+GGG - Chr5:15683452-15683471 MsG0580025235.01.T01:intron 40.0%
! TTTAGTTCCCCCAAATTAGG+AGG + Chr5:15683429-15683448 None:intergenic 40.0%
!! AGAGGTGTTGTTAATTCTGC+AGG + Chr5:15682206-15682225 None:intergenic 40.0%
!! AGGTGTTGTTAATTCTGCAG+GGG + Chr5:15682204-15682223 None:intergenic 40.0%
!! CTTGCTGTTTGAATTTAGGC+AGG + Chr5:15682256-15682275 None:intergenic 40.0%
!! GAGGTGTTGTTAATTCTGCA+GGG + Chr5:15682205-15682224 None:intergenic 40.0%
!! TGAGGTGTTGAATGATAGCT+TGG - Chr5:15681263-15681282 MsG0580025235.01.T01:intron 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG + Chr5:15683660-15683679 None:intergenic 40.0%
!!! GTTGGTTTAACTGGTTTTGC+TGG - Chr5:15680546-15680565 MsG0580025235.01.T01:three_prime_UTR 40.0%
!!! TGACTTTTTTTTGCCCGATG+TGG - Chr5:15683948-15683967 MsG0580025235.01.T01:intron 40.0%
!!! TTAACTGGTTTTGCTGGCTA+TGG - Chr5:15680552-15680571 MsG0580025235.01.T01:three_prime_UTR 40.0%
AAACAATTGCATGGCAGTGC+TGG - Chr5:15684727-15684746 MsG0580025235.01.T01:intron 45.0%
AACGAACCATCGAAACCTCT+GGG - Chr5:15680774-15680793 MsG0580025235.01.T01:three_prime_UTR 45.0%
AAGCAAGCTGAGGCAATAAC+TGG - Chr5:15681231-15681250 MsG0580025235.01.T01:intron 45.0%
ACCAAACCGGACAGTTCAAT+CGG + Chr5:15680882-15680901 None:intergenic 45.0%
ACGACCTCGGAAACAAAGAT+TGG - Chr5:15682597-15682616 MsG0580025235.01.T01:intron 45.0%
ACTGTAAGTGCAGGAGGATA+AGG - Chr5:15684327-15684346 MsG0580025235.01.T01:intron 45.0%
AGGAATAAATGACCGCAACC+AGG - Chr5:15682441-15682460 MsG0580025235.01.T01:intron 45.0%
AGGGAGAACCATTCCGATAA+AGG + Chr5:15683255-15683274 None:intergenic 45.0%
AGTTAAACCAACCCCGGAAT+TGG + Chr5:15680538-15680557 None:intergenic 45.0%
ATATGACCCAGAGGTTTCGA+TGG + Chr5:15680783-15680802 None:intergenic 45.0%
ATCACAAGTCAGCTAGCCAA+AGG + Chr5:15683690-15683709 None:intergenic 45.0%
ATGCGTAGTGAATTGAGGTC+TGG - Chr5:15684058-15684077 MsG0580025235.01.T01:intron 45.0%
ATTTAGGCAGGTTGTCCACA+AGG + Chr5:15682244-15682263 None:intergenic 45.0%
CAGAAAACCACATCAACTGG+TGG + Chr5:15684994-15685013 None:intergenic 45.0%
CTGTAAGTGCAGGAGGATAA+GGG - Chr5:15684328-15684347 MsG0580025235.01.T01:intron 45.0%
GAGATAGATAAAGTCACGGC+TGG - Chr5:15684179-15684198 MsG0580025235.01.T01:intron 45.0%
GCGGTCATTTATTCCTCTGA+AGG + Chr5:15682437-15682456 None:intergenic 45.0%
GGAATAAATGACCGCAACCA+GGG - Chr5:15682442-15682461 MsG0580025235.01.T01:intron 45.0%
GGAGAATATCCTCTCTAGCA+TGG + Chr5:15682496-15682515 None:intergenic 45.0%
GGAGAATGTATCTCGGTCAT+TGG - Chr5:15681284-15681303 MsG0580025235.01.T01:intron 45.0%
GGAGGCCTTCATTATTGACA+TGG + Chr5:15682558-15682577 None:intergenic 45.0%
GGTTTCGATGGTTCGTTGTT+CGG + Chr5:15680771-15680790 None:intergenic 45.0%
GTGTAGGTTAAGAGGCTTGA+GGG - Chr5:15681192-15681211 MsG0580025235.01.T01:intron 45.0%
TATTGACATGGGAGAGTGGA+AGG + Chr5:15682546-15682565 None:intergenic 45.0%
TCAATATACGAAGAACGGCG+AGG + Chr5:15684614-15684633 None:intergenic 45.0%
TCACAAGTCAGCTAGCCAAA+GGG + Chr5:15683689-15683708 None:intergenic 45.0%
TCAGATAGTTGGAACGACCT+CGG - Chr5:15682584-15682603 MsG0580025235.01.T01:intron 45.0%
TCTAGCATGGGAAGAAGACT+TGG + Chr5:15682483-15682502 None:intergenic 45.0%
TGGTCTCTATTTGGTTGCTG+AGG + Chr5:15681971-15681990 None:intergenic 45.0%
TGTGTAGGTTAAGAGGCTTG+AGG - Chr5:15681191-15681210 MsG0580025235.01.T01:intron 45.0%
TGTTTGACTGTAAGTGCAGG+AGG - Chr5:15684321-15684340 MsG0580025235.01.T01:CDS 45.0%
TTATTGCATTTGGCACGCTG+CGG + Chr5:15681996-15682015 None:intergenic 45.0%
TTCCTTGTGTTCTTAGGTGC+TGG + Chr5:15681842-15681861 None:intergenic 45.0%
TTTAGGCAGGTTGTCCACAA+GGG + Chr5:15682243-15682262 None:intergenic 45.0%
TTTATCGGAATGGTTCTCCC+TGG - Chr5:15683254-15683273 MsG0580025235.01.T01:intron 45.0%
TTTGGGAGTTTGGAGAGGAT+GGG - Chr5:15683321-15683340 MsG0580025235.01.T01:intron 45.0%
! ATTGTTCTGGGTTGTGGTGT+AGG - Chr5:15684153-15684172 MsG0580025235.01.T01:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG + Chr5:15683655-15683674 None:intergenic 45.0%
! GAAGACTTGGTCAGTGAACT+AGG + Chr5:15682470-15682489 None:intergenic 45.0%
! TGCCATTTCATTTGTGGACC+CGG - Chr5:15680919-15680938 MsG0580025235.01.T01:CDS 45.0%
! TGTATTGGACGAGGGTTTTG+GGG - Chr5:15683453-15683472 MsG0580025235.01.T01:intron 45.0%
! TTCTACTCCACCAGTTGATG+TGG - Chr5:15684984-15685003 MsG0580025235.01.T01:CDS 45.0%
!! AAAGAATGGAGAGCTTTGGG+AGG - Chr5:15683372-15683391 MsG0580025235.01.T01:intron 45.0%
!! AATTCCGGGGTTGGTTTAAC+TGG - Chr5:15680537-15680556 MsG0580025235.01.T01:three_prime_UTR 45.0%
!! AGTGCCTTTAAAGCAAGCTG+AGG - Chr5:15681221-15681240 MsG0580025235.01.T01:intron 45.0%
!! CTCAATTCGATAAAGCACCG+AGG + Chr5:15683926-15683945 None:intergenic 45.0%
!! GAGTGGGTTAGGCTTTGTTT+GGG + Chr5:15683667-15683686 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + Chr5:15683656-15683675 None:intergenic 45.0%
!! GGTTTTGCTGGCTATGGAAT+TGG - Chr5:15680558-15680577 MsG0580025235.01.T01:three_prime_UTR 45.0%
!! TGCACCCTTTGTTGTTGTGT+AGG - Chr5:15681176-15681195 MsG0580025235.01.T01:CDS 45.0%
AAAGCCTAACCCACTCCCTT+TGG - Chr5:15683671-15683690 MsG0580025235.01.T01:intron 50.0%
ACCGATTGAACTGTCCGGTT+TGG - Chr5:15680878-15680897 MsG0580025235.01.T01:three_prime_UTR 50.0%
AGGGCTGCTCTATCTAAGAG+AGG + Chr5:15682224-15682243 None:intergenic 50.0%
ATAAAGTCACGGCTGGACAG+CGG - Chr5:15684186-15684205 MsG0580025235.01.T01:intron 50.0%
CAACGAACCATCGAAACCTC+TGG - Chr5:15680773-15680792 MsG0580025235.01.T01:three_prime_UTR 50.0%
CGTGTTGGAGCAGAGAAAAG+TGG + Chr5:15684006-15684025 None:intergenic 50.0%
CTCTGTTTGGGAGTTTGGAG+AGG - Chr5:15683316-15683335 MsG0580025235.01.T01:intron 50.0%
CTTAGATAGAGCAGCCCTTG+TGG - Chr5:15682226-15682245 MsG0580025235.01.T01:intron 50.0%
GAGATTGAGGACCAATTCCG+GGG - Chr5:15680524-15680543 MsG0580025235.01.T01:three_prime_UTR 50.0%
GAGTTTGGAGAGGATGGGAA+GGG - Chr5:15683326-15683345 MsG0580025235.01.T01:intron 50.0%
GCCATTTCATTTGTGGACCC+GGG - Chr5:15680920-15680939 MsG0580025235.01.T01:CDS 50.0%
GCTGCGGTATGGTCTCTATT+TGG + Chr5:15681980-15681999 None:intergenic 50.0%
GGAGATTGAGGACCAATTCC+GGG - Chr5:15680523-15680542 MsG0580025235.01.T01:three_prime_UTR 50.0%
GGGAGATTGAGGACCAATTC+CGG - Chr5:15680522-15680541 MsG0580025235.01.T01:three_prime_UTR 50.0%
GTCCAGCACCTAAGAACACA+AGG - Chr5:15681837-15681856 MsG0580025235.01.T01:intron 50.0%
GTCTTCTTCCCATGCTAGAG+AGG - Chr5:15682484-15682503 MsG0580025235.01.T01:intron 50.0%
GTTAAGAGGCTTGAGGGACA+AGG - Chr5:15681198-15681217 MsG0580025235.01.T01:intron 50.0%
GTTTGGGAGTTTGGAGAGGA+TGG - Chr5:15683320-15683339 MsG0580025235.01.T01:intron 50.0%
TGTGGGATCTTCTGACTGCA+AGG - Chr5:15681102-15681121 MsG0580025235.01.T01:intron 50.0%
TTGGGCAGCTAGCTAATTGC+AGG + Chr5:15682040-15682059 None:intergenic 50.0%
TTTGGGAGTTTGGAGGGGAA+GGG + Chr5:15683650-15683669 None:intergenic 50.0%
! AACAGAAGTGCAGAGCTCAC+AGG - Chr5:15681543-15681562 MsG0580025235.01.T01:intron 50.0%
! TGGTGCATTGTTCTGGGTTG+TGG - Chr5:15684147-15684166 MsG0580025235.01.T01:intron 50.0%
!! GGAGTGGGTTAGGCTTTGTT+TGG + Chr5:15683668-15683687 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + Chr5:15683657-15683676 None:intergenic 50.0%
!! GTATTGGACGAGGGTTTTGG+GGG - Chr5:15683454-15683473 MsG0580025235.01.T01:intron 50.0%
AGTCAGCTAGCCAAAGGGAG+TGG + Chr5:15683684-15683703 None:intergenic 55.0%
CCAAAAGGCCACTAACGTCC+CGG - Chr5:15681070-15681089 MsG0580025235.01.T01:intron 55.0%
CCAGCTGAGCCCTTAAAGCA+TGG + Chr5:15684527-15684546 None:intergenic 55.0%
GCCCGGGTCCACAAATGAAA+TGG + Chr5:15680924-15680943 None:intergenic 55.0%
GGAGTTTGGAGAGGATGGGA+AGG - Chr5:15683325-15683344 MsG0580025235.01.T01:intron 55.0%
GTCAGCTAGCCAAAGGGAGT+GGG + Chr5:15683683-15683702 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+AGG + Chr5:15683651-15683670 None:intergenic 55.0%
TCCTCAATCTCCCCAATCGC+CGG + Chr5:15680515-15680534 None:intergenic 55.0%
TGAACTAGGCACCCTGGTTG+CGG + Chr5:15682456-15682475 None:intergenic 55.0%
TTGAGGACCAATTCCGGGGT+TGG - Chr5:15680528-15680547 MsG0580025235.01.T01:three_prime_UTR 55.0%
! CAATTGCATGGCAGTGCTGG+TGG - Chr5:15684730-15684749 MsG0580025235.01.T01:intron 55.0%
! CTAGCCAAAGGGAGTGGGTT+AGG + Chr5:15683678-15683697 None:intergenic 55.0%
!! CCATGCTTTAAGGGCTCAGC+TGG - Chr5:15684524-15684543 MsG0580025235.01.T01:intron 55.0%
!!! GACGAGGGTTTTGGGGGTTT+GGG - Chr5:15683460-15683479 MsG0580025235.01.T01:intron 55.0%
AGATCCCACATCCACGCAGC+CGG + Chr5:15681092-15681111 None:intergenic 60.0%
GAGTTTGGAGGGGAAGGGAG+GGG + Chr5:15683645-15683664 None:intergenic 60.0%
GCATTTGGCACGCTGCGGTA+TGG + Chr5:15681991-15682010 None:intergenic 60.0%
GGAGTTTGGAGGGGAAGGGA+GGG + Chr5:15683646-15683665 None:intergenic 60.0%
GGTCAGTGAACTAGGCACCC+TGG + Chr5:15682462-15682481 None:intergenic 60.0%
GTCCTGACTGCGTGGATGCA+GGG + Chr5:15680949-15680968 None:intergenic 60.0%
TCCTGACTGCGTGGATGCAG+GGG + Chr5:15680948-15680967 None:intergenic 60.0%
TGTCCTGACTGCGTGGATGC+AGG + Chr5:15680950-15680969 None:intergenic 60.0%
! CCGGGACGTTAGTGGCCTTT+TGG + Chr5:15681073-15681092 None:intergenic 60.0%
!! CAGTGCTGGTGGAGCTGAAG+TGG - Chr5:15684741-15684760 MsG0580025235.01.T01:intron 60.0%
!!! GGACGAGGGTTTTGGGGGTT+TGG - Chr5:15683459-15683478 MsG0580025235.01.T01:intron 60.0%
AGTCACGGCTGGACAGCGGT+TGG - Chr5:15684190-15684209 MsG0580025235.01.T01:intron 65.0%
CCACGCAGTCAGGACATCCG+TGG - Chr5:15680954-15680973 MsG0580025235.01.T01:CDS 65.0%
CCACGGATGTCCTGACTGCG+TGG + Chr5:15680957-15680976 None:intergenic 65.0%
GATCCCACATCCACGCAGCC+GGG + Chr5:15681091-15681110 None:intergenic 65.0%
GCCGGCGATTGGGGAGATTG+AGG - Chr5:15680511-15680530 MsG0580025235.01.T01:three_prime_UTR 65.0%
GGGAGTTTGGAGGGGAAGGG+AGG + Chr5:15683647-15683666 None:intergenic 65.0%
TCCCCTGCATCCACGCAGTC+AGG - Chr5:15680944-15680963 MsG0580025235.01.T01:CDS 65.0%
TTGGAGGGGAAGGGAGGGGA+GGG + Chr5:15683641-15683660 None:intergenic 65.0%
TTTGGAGGGGAAGGGAGGGG+AGG + Chr5:15683642-15683661 None:intergenic 65.0%
! AAGGGAGGGGAGGGCTTTGG+AGG + Chr5:15683632-15683651 None:intergenic 65.0%
!! AGGGAGGGGAGGGCTTTGGA+GGG + Chr5:15683631-15683650 None:intergenic 65.0%
ACGTCCCGGCTGCGTGGATG+TGG - Chr5:15681084-15681103 MsG0580025235.01.T01:intron 70.0%
CCACGCAGCCGGGACGTTAG+TGG + Chr5:15681081-15681100 None:intergenic 70.0%
CCACTAACGTCCCGGCTGCG+TGG - Chr5:15681078-15681097 MsG0580025235.01.T01:intron 70.0%
CGTCCCGGCTGCGTGGATGT+GGG - Chr5:15681085-15681104 MsG0580025235.01.T01:intron 70.0%
GGGAAGGGAGGGGAGGGCTT+TGG + Chr5:15683635-15683654 None:intergenic 70.0%
GTGGCGGCTTGCCGGCGATT+GGG - Chr5:15680501-15680520 MsG0580025235.01.T01:three_prime_UTR 70.0%
TGCGTGGATGCAGGGGAGCC+CGG + Chr5:15680941-15680960 None:intergenic 70.0%
TGGCGGCTTGCCGGCGATTG+GGG - Chr5:15680502-15680521 MsG0580025235.01.T01:three_prime_UTR 70.0%
TGTGGCGGCTTGCCGGCGAT+TGG - Chr5:15680500-15680519 MsG0580025235.01.T01:three_prime_UTR 70.0%
GCGTGGATGCAGGGGAGCCC+GGG + Chr5:15680940-15680959 None:intergenic 75.0%
TCGCCGGCAAGCCGCCACAG+CGG + Chr5:15680499-15680518 None:intergenic 75.0%
TGGCCGCTGTGGCGGCTTGC+CGG - Chr5:15680493-15680512 MsG0580025235.01.T01:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
Chr5 gene 15680492 15685049 15680492 ID=MsG0580025235.01;Name=MsG0580025235.01
Chr5 mRNA 15680492 15685049 15680492 ID=MsG0580025235.01.T01;Parent=MsG0580025235.01;Name=MsG0580025235.01.T01;_AED=0.39;_eAED=0.39;_QI=0|0.83|0.85|1|1|1|7|411|233
Chr5 exon 15680492 15681022 15680492 ID=MsG0580025235.01.T01:exon:3211;Parent=MsG0580025235.01.T01
Chr5 exon 15681135 15681201 15681135 ID=MsG0580025235.01.T01:exon:3210;Parent=MsG0580025235.01.T01
Chr5 exon 15681310 15681366 15681310 ID=MsG0580025235.01.T01:exon:3209;Parent=MsG0580025235.01.T01
Chr5 exon 15681467 15681543 15681467 ID=MsG0580025235.01.T01:exon:3208;Parent=MsG0580025235.01.T01
Chr5 exon 15683977 15684036 15683977 ID=MsG0580025235.01.T01:exon:3207;Parent=MsG0580025235.01.T01
Chr5 exon 15684212 15684343 15684212 ID=MsG0580025235.01.T01:exon:3206;Parent=MsG0580025235.01.T01
Chr5 exon 15684861 15685049 15684861 ID=MsG0580025235.01.T01:exon:3205;Parent=MsG0580025235.01.T01
Chr5 CDS 15684861 15685049 15684861 ID=MsG0580025235.01.T01:cds;Parent=MsG0580025235.01.T01
Chr5 CDS 15684212 15684343 15684212 ID=MsG0580025235.01.T01:cds;Parent=MsG0580025235.01.T01
Chr5 CDS 15683977 15684036 15683977 ID=MsG0580025235.01.T01:cds;Parent=MsG0580025235.01.T01
Chr5 CDS 15681467 15681543 15681467 ID=MsG0580025235.01.T01:cds;Parent=MsG0580025235.01.T01
Chr5 CDS 15681310 15681366 15681310 ID=MsG0580025235.01.T01:cds;Parent=MsG0580025235.01.T01
Chr5 CDS 15681135 15681201 15681135 ID=MsG0580025235.01.T01:cds;Parent=MsG0580025235.01.T01
Chr5 CDS 15680903 15681022 15680903 ID=MsG0580025235.01.T01:cds;Parent=MsG0580025235.01.T01
Chr5 three_prime_UTR 15680492 15680902 15680492 ID=MsG0580025235.01.T01:three_prime_utr;Parent=MsG0580025235.01.T01
Gene Sequence

>MsG0580025235.01.T01

ATGGCCGCTGTGGCGGCTTGCCGGCGATTGGGGAGATTGAGGACCAATTCCGGGGTTGGTTTAACTGGTTTTGCTGGCTATGGAATTGGAGCTTCCAAATTTTCACCTTCAATTTCGGGTTCCATGTATTTTTCTGGTTTTGGTAAATCAAATGGACAACGGTTGTTTCTTGTTGATACATTAGCCCTTGTTAAGAGGCTTGAGGGACAAGGAGTGCCTTTAAAGCAAGCTGAGGCAATAACTGGTGCTATAACTGAGGTGTTGAATGATAGCTTGGAGAATGTATCTCGGTCATTGGTATCAAAAGAAGAAATGCAGAGGACTGAGATGCAACAAGAAGCCAACCTGTCCAAATTCAAAACAGAAGTGCAGAGCTCACAGGGACACCACTTTTCTCTGCTCCAACACGAAACTGAGAAGCTTAAAAATGATATAGAGAAGATGCGTAGTGAATTGAGGTATGAGATAGATAAAGTCACGGCTGGACAGCGGTTGGATTTAAACCTTGAAAGGGGGAGGATAAGGGAAGAGCTAACCAATCAAAATGCTGAAACTAACAACCTGACTAACAAACTTGATAGAGAAATCCATGCTTTAAGGGCTCAGCTGGAAGCAGCCAAATATGATGTGATAAAGTACTGCATAGGAACACTTGTTTCAATATCTGCTGTTGGCCTCGCCGTTCTTCGTATATTGATGTAA
Protein sequence

>MsG0580025235.01.T01

MAAVAACRRLGRLRTNSGVGLTGFAGYGIGASKFSPSISGSMYFSGFGKSNGQRLFLVDTLALVKRLEGQGVPLKQAEAITGAITEVLNDSLENVSRSLVSKEEMQRTEMQQEANLSKFKTEVQSSQGHHFSLLQHETEKLKNDIEKMRSELRYEIDKVTAGQRLDLNLERGRIREELTNQNAETNNLTNKLDREIHALRAQLEAAKYDVIKYCIGTLVSISAVGLAVLRILM*