AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025726.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025726.01.T01 MTR_7g060560 59.375 160 12 2 136 248 5 158 1.13e-50 172
MsG0580025726.01.T01 MTR_3g090510 81.000 100 7 1 161 248 66 165 6.50e-47 163
MsG0580025726.01.T01 MTR_1g037030 70.339 118 3 3 137 243 6 102 2.13e-44 151
MsG0580025726.01.T01 MTR_1g115335 82.927 82 2 2 136 206 38 118 3.39e-31 114
MsG0580025726.01.T01 MTR_5g008160 82.927 82 2 2 136 206 6 86 1.37e-30 111
MsG0580025726.01.T01 MTR_1g090140 84.615 65 10 0 179 243 113 177 1.99e-28 115
MsG0580025726.01.T01 MTR_1g090130 80.000 65 13 0 179 243 113 177 4.53e-27 111
MsG0580025726.01.T01 MTR_8g017080 70.769 65 19 0 179 243 114 178 3.76e-21 94.4
MsG0580025726.01.T01 MTR_6g055665 82.000 50 9 0 219 268 1 50 9.14e-21 84.3
MsG0580025726.01.T01 MTR_7g089480 86.000 50 7 0 267 316 173 222 1.12e-19 90.1
MsG0580025726.01.T01 MTR_1g106630 73.684 57 11 1 136 192 5 57 1.17e-19 82.4
MsG0580025726.01.T01 MTR_5g098510 70.175 57 12 1 136 192 5 56 1.91e-18 84.0
MsG0580025726.01.T01 MTR_5g098510 70.175 57 12 1 136 192 37 88 2.31e-18 84.3
MsG0580025726.01.T01 MTR_8g064990 85.714 42 6 0 50 91 176 217 8.99e-17 79.0
MsG0580025726.01.T01 MTR_8g064990 85.714 42 6 0 50 91 250 291 1.94e-16 79.0
MsG0580025726.01.T01 MTR_4g086660 74.000 50 13 0 267 316 169 218 1.95e-16 80.5
MsG0580025726.01.T01 MTR_5g017830 74.000 50 13 0 267 316 166 215 2.70e-16 79.7
MsG0580025726.01.T01 MTR_8g079790 83.721 43 7 0 274 316 167 209 3.35e-16 79.7
MsG0580025726.01.T01 MTR_8g062580 82.927 41 7 0 50 90 13 53 9.35e-15 73.2
MsG0580025726.01.T01 MTR_3g109975 94.118 34 2 0 244 277 20 53 5.63e-14 67.4
MsG0580025726.01.T01 MTR_3g092230 72.093 43 12 0 274 316 177 219 3.04e-13 70.9
MsG0580025726.01.T01 MTR_7g118020 67.442 43 14 0 274 316 183 225 7.42e-12 66.6
MsG0580025726.01.T01 MTR_3g096590 96.774 31 1 0 243 273 119 149 2.35e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025726.01.T01 AT3G23990 80.000 65 13 0 179 243 112 176 1.11e-26 110
MsG0580025726.01.T01 AT2G33210 78.462 65 14 0 179 243 113 177 7.34e-26 108
MsG0580025726.01.T01 AT2G33210 78.462 65 14 0 179 243 113 177 7.66e-26 108
MsG0580025726.01.T01 AT3G13860 67.692 65 21 0 179 243 112 176 5.23e-20 90.9
MsG0580025726.01.T01 AT3G56760 78.000 50 11 0 267 316 156 205 7.95e-18 84.3
MsG0580025726.01.T01 AT2G41140 74.000 50 13 0 267 316 155 204 1.35e-16 80.9
MsG0580025726.01.T01 AT3G50530 72.000 50 14 0 267 316 180 229 1.45e-15 77.8
MsG0580025726.01.T01 AT3G50530 72.000 50 14 0 267 316 180 229 1.47e-15 77.8
MsG0580025726.01.T01 AT3G19100 70.000 50 15 0 267 316 176 225 1.64e-15 77.8
MsG0580025726.01.T01 AT1G49580 72.000 50 14 0 267 316 182 231 1.86e-15 77.4
MsG0580025726.01.T01 AT1G60550 80.488 41 8 0 50 90 259 299 4.23e-15 75.5
MsG0580025726.01.T01 AT2G46700 67.442 43 14 0 274 316 182 224 1.53e-11 65.5
MsG0580025726.01.T01 AT2G46700 67.442 43 14 0 274 316 1 43 1.78e-11 65.1
MsG0580025726.01.T01 AT2G46700 67.442 43 14 0 274 316 1 43 1.78e-11 65.1
MsG0580025726.01.T01 AT5G24430 60.465 43 17 0 274 316 182 224 3.19e-11 64.7
MsG0580025726.01.T01 AT3G49370 60.465 43 17 0 274 316 181 223 3.90e-11 64.3
MsG0580025726.01.T01 AT2G17890 62.791 43 16 0 274 316 144 186 5.49e-11 63.9

Find 74 sgRNAs with CRISPR-Local

Find 418 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTAATCGGGCATAAGAATT+TGG 0.305782 5:+23253350 MsG0580025726.01.T01:CDS
AAAGATGGTGAAGGAACTTC+TGG 0.328954 5:+23250873 MsG0580025726.01.T01:CDS
AAGGAACTTCTGGAATTAAC+AGG 0.334244 5:+23250883 MsG0580025726.01.T01:CDS
TCGTACTTATGTTCCCCATT+AGG 0.342212 5:+23246578 None:intergenic
GAATAGCCGAACCGCAATTC+AGG 0.344321 5:+23250286 MsG0580025726.01.T01:CDS
TGATGGGCACGCCGGACTTC+AGG 0.361855 5:+23250337 MsG0580025726.01.T01:CDS
AGAAAATGCTTATGTAGTTA+TGG 0.364690 5:+23253401 MsG0580025726.01.T01:CDS
GATGGACCGGGCAGCCTCAA+TGG 0.370085 5:-23246713 None:intergenic
CAGTATTTATGTTGCCCATT+GGG 0.382812 5:+23246671 MsG0580025726.01.T01:CDS
TCTGAAGCGAGGTATAAATA+TGG 0.385017 5:+23251472 MsG0580025726.01.T01:CDS
TCTTATCCGAGCAATATTTA+CGG 0.391574 5:+23251409 MsG0580025726.01.T01:CDS
GATGGTGAAGGCAGTCCTAA+TGG 0.400710 5:-23246593 None:intergenic
ATGGTGAAGGCAGTCCTAAT+GGG 0.417540 5:-23246592 None:intergenic
TCAATGGGCAACATAATTAT+CGG 0.420796 5:-23246697 None:intergenic
GCTATTAATGCAGTCGATGA+TGG 0.425488 5:+23250320 MsG0580025726.01.T01:CDS
GAAAATGCTTATGTAGTTAT+GGG 0.431315 5:+23253402 MsG0580025726.01.T01:CDS
CAATGGGCAACATAATTATC+GGG 0.440204 5:-23246696 None:intergenic
AAGATATTGAGAGCTCTAAT+CGG 0.445132 5:+23253336 MsG0580025726.01.T01:CDS
ATGGACCGGGCAGCCTCAAT+GGG 0.446697 5:-23246712 None:intergenic
CATAATTATCGGGGTCCCAA+TGG 0.462155 5:-23246686 None:intergenic
TTGTGAAGAAGTGTTTCATA+AGG 0.463510 5:-23250972 None:intergenic
GACAACAGCAATTGCTATAG+AGG 0.467919 5:+23253296 MsG0580025726.01.T01:CDS
ATTGAGGCTGCCCGGTCCAT+CGG 0.468732 5:+23246715 MsG0580025726.01.T01:CDS
TCAGTATTTATGTTGCCCAT+TGG 0.480578 5:+23246670 MsG0580025726.01.T01:CDS
AGTAATAGTAGAGGAAAAGA+TGG 0.496274 5:+23250858 MsG0580025726.01.T01:intron
ATAATTATCGGGGTCCCAAT+GGG 0.498401 5:-23246685 None:intergenic
TGAGAACCTGAATTGCGGTT+CGG 0.499686 5:-23250292 None:intergenic
TAAGAAAGAGGTTAGTGAAT+CGG 0.505562 5:+23250742 MsG0580025726.01.T01:CDS
GTATACTTCTCTTGAGCACC+GGG 0.509705 5:+23246617 MsG0580025726.01.T01:CDS
TCAAGGTTCAGTGACTGAGT+TGG 0.511317 5:-23252415 None:intergenic
GGTATACTTCTCTTGAGCAC+CGG 0.512160 5:+23246616 MsG0580025726.01.T01:CDS
CTATTAATGCAGTCGATGAT+GGG 0.513413 5:+23250321 MsG0580025726.01.T01:CDS
GATAATTATGTTGCCCATTG+AGG 0.517483 5:+23246699 MsG0580025726.01.T01:CDS
AGAGAAGTATACCGATGGAC+CGG 0.517864 5:-23246726 None:intergenic
ATAATCTTCATCGTCAGAAT+CGG 0.518620 5:-23250681 None:intergenic
TGTTGCCCATTGAGGCTGCC+CGG 0.525244 5:+23246707 MsG0580025726.01.T01:CDS
GGATGCAAATCAGTAGCAGC+TGG 0.525302 5:+23251434 MsG0580025726.01.T01:CDS
AGATATTGAGAGCTCTAATC+GGG 0.529013 5:+23253337 MsG0580025726.01.T01:CDS
CACAATAACATGAATACCAA+TGG 0.529525 5:+23250990 MsG0580025726.01.T01:CDS
ATCCTTCCGTAAATATTGCT+CGG 0.530459 5:-23251415 None:intergenic
AGGAATTGGAACTGATTTCG+AGG 0.534500 5:-23252461 None:intergenic
AAACGATAAAATGGTGTAGG+AGG 0.539772 5:+23250255 MsG0580025726.01.T01:CDS
ACTTGTGGCTGCTAAGAAAG+AGG 0.559330 5:+23250730 MsG0580025726.01.T01:CDS
ATTAGGACTGCCTTCACCAT+CGG 0.570497 5:+23246595 MsG0580025726.01.T01:CDS
GAGAAGTATACCGATGGACC+GGG 0.572072 5:-23246725 None:intergenic
AGTAGAGGAAAAGATGGTGA+AGG 0.577544 5:+23250864 MsG0580025726.01.T01:intron
ATAGCAACAGGCTTAGACAC+AGG 0.578410 5:-23250633 None:intergenic
ATCCGAGCAATATTTACGGA+AGG 0.580431 5:+23251413 MsG0580025726.01.T01:CDS
AACCGCAATTCAGGTTCTCA+AGG 0.586212 5:+23250295 MsG0580025726.01.T01:CDS
ATAGTGATATACCTGAAGTC+CGG 0.586667 5:-23250348 None:intergenic
CAAATGTATCAACCTTCTCA+AGG 0.589767 5:-23252432 None:intergenic
GAGAAGTATACCGATGGTGA+AGG 0.590395 5:-23246605 None:intergenic
AATGGTGTAGGAGGATACTC+AGG 0.597880 5:+23250264 MsG0580025726.01.T01:CDS
GAAATCAGTTCCAATTCCTA+CGG 0.601264 5:+23252465 MsG0580025726.01.T01:CDS
TGATTGTGAGGTAAAGATGA+CGG 0.614510 5:-23246645 None:intergenic
GATAAGAACTGTAGCACAAG+TGG 0.614765 5:-23251393 None:intergenic
TAAATACTGATTTGATTGTG+AGG 0.618184 5:-23246657 None:intergenic
ATGCTTATGTAGTTATGGGA+CGG 0.619882 5:+23253406 MsG0580025726.01.T01:CDS
TCAGTCACTGAACCTTGAGA+AGG 0.625284 5:+23252420 MsG0580025726.01.T01:CDS
AGCAGCTGGAATGAATGCAA+TGG 0.628789 5:+23251448 MsG0580025726.01.T01:CDS
TGAAGAAGAGAAGAAACTTG+TGG 0.630842 5:+23250715 MsG0580025726.01.T01:CDS
CACTTCTGAAGAAATAACTC+AGG 0.631246 5:+23251544 MsG0580025726.01.T01:CDS
TGCCTTGAGAACCTGAATTG+CGG 0.636958 5:-23250297 None:intergenic
TTATGTAGTTATGGGACGGA+GGG 0.638184 5:+23253410 MsG0580025726.01.T01:CDS
TGGTGAAGGCAGTCCTAATG+GGG 0.648051 5:-23246591 None:intergenic
ACTTCTCTTGAGCACCGGGG+TGG 0.648622 5:+23246621 MsG0580025726.01.T01:CDS
CTTATGTAGTTATGGGACGG+AGG 0.654649 5:+23253409 MsG0580025726.01.T01:CDS
GCAGTCGATGATGGGCACGC+CGG 0.657502 5:+23250329 MsG0580025726.01.T01:CDS
GCTCAAGAGAAGTATACCGA+TGG 0.675387 5:-23246611 None:intergenic
AGGAACTTCTGGAATTAACA+GGG 0.685506 5:+23250884 MsG0580025726.01.T01:CDS
AATGGGCAACATAATTATCG+GGG 0.691604 5:-23246695 None:intergenic
GTAAAGATGACGGTCCACCC+CGG 0.702767 5:-23246635 None:intergenic
AATGCAATGGATCTGAAGCG+AGG 0.709828 5:+23251461 MsG0580025726.01.T01:CDS
TATACTTCTCTTGAGCACCG+GGG 0.757669 5:+23246618 MsG0580025726.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTAATTTATTAAA+TGG + Chr5:23248253-23248272 MsG0580025726.01.T01:intron 0.0%
!! TATTCTATTTATAATTGATT+TGG + Chr5:23252234-23252253 MsG0580025726.01.T01:intron 10.0%
!!! AAAGATTTGTATTTTTTTTT+TGG - Chr5:23249037-23249056 None:intergenic 10.0%
!!! CATAAAATAATTTTTTTATG+GGG - Chr5:23247145-23247164 None:intergenic 10.0%
!!! CATAGAATAATTTTTTTTTA+TGG - Chr5:23248733-23248752 None:intergenic 10.0%
!!! TAGAATAATTTTTTTTTATG+GGG - Chr5:23248731-23248750 None:intergenic 10.0%
!!! TATTAGTTTAATTTTGTAAA+TGG - Chr5:23248200-23248219 None:intergenic 10.0%
!! AAAAAAAAAATCCACATAAA+AGG - Chr5:23248242-23248261 None:intergenic 15.0%
!! AATTGAAAGAAAATGAAAAA+AGG - Chr5:23251060-23251079 None:intergenic 15.0%
!! ATCATATAGTATTATATTCT+AGG + Chr5:23248088-23248107 MsG0580025726.01.T01:intron 15.0%
!! ATGAGAGTAAATAAATATAT+AGG + Chr5:23252861-23252880 MsG0580025726.01.T01:intron 15.0%
!! ATTACAAAAAACTAACTAAT+AGG - Chr5:23252716-23252735 None:intergenic 15.0%
!! TAAAAAATATTCAAAGTGAA+GGG + Chr5:23252682-23252701 MsG0580025726.01.T01:intron 15.0%
!! TTAAAAAATATTCAAAGTGA+AGG + Chr5:23252681-23252700 MsG0580025726.01.T01:intron 15.0%
!! TTATCACTATAAAAAAATCT+TGG + Chr5:23250817-23250836 MsG0580025726.01.T01:intron 15.0%
!!! AAAAAAATGATAACAAGTTT+TGG + Chr5:23247287-23247306 MsG0580025726.01.T01:intron 15.0%
!!! AAAGAGATTTTTCATTAAAT+TGG + Chr5:23249196-23249215 MsG0580025726.01.T01:intron 15.0%
!!! AAGAGATTTTTCATTAAATT+GGG + Chr5:23249197-23249216 MsG0580025726.01.T01:intron 15.0%
!!! AATTGTGGTAATTTTTTTAA+AGG + Chr5:23248799-23248818 MsG0580025726.01.T01:intron 15.0%
!!! AGAATTAGTTTATGTATTTA+CGG - Chr5:23249083-23249102 None:intergenic 15.0%
!!! AGAGATTTTTTTCATTAAAT+TGG + Chr5:23247606-23247625 MsG0580025726.01.T01:intron 15.0%
!!! ATAATGAATTTGTGAATTTT+TGG + Chr5:23251106-23251125 MsG0580025726.01.T01:intron 15.0%
!!! GAGATTTTTTTCATTAAATT+GGG + Chr5:23247607-23247626 MsG0580025726.01.T01:intron 15.0%
!!! TATAGCTATTTGATTTTTTA+CGG + Chr5:23252342-23252361 MsG0580025726.01.T01:intron 15.0%
!!! TATTAGTTAGTTTTTTGTAA+TGG + Chr5:23252715-23252734 MsG0580025726.01.T01:intron 15.0%
!!! TTTTTTAAAACTCACAAATT+TGG - Chr5:23248023-23248042 None:intergenic 15.0%
!! AAGAATAATTAGATGAATTG+AGG - Chr5:23249496-23249515 None:intergenic 20.0%
!! ATACAACAAAAGATTTAACA+CGG + Chr5:23247535-23247554 MsG0580025726.01.T01:intron 20.0%
!! ATTATAAGATTAAGATAGCA+AGG - Chr5:23247937-23247956 None:intergenic 20.0%
!! ATTGTAAAGGACAAAATAAT+TGG + Chr5:23247881-23247900 MsG0580025726.01.T01:intron 20.0%
!! CTAATTATTCTTAAATCAAG+TGG + Chr5:23249504-23249523 MsG0580025726.01.T01:intron 20.0%
!! CTCTTTGTTCTTATATATTT+GGG + Chr5:23253259-23253278 MsG0580025726.01.T01:intron 20.0%
!! TAATCAATGAAAATTGCATT+AGG + Chr5:23252942-23252961 MsG0580025726.01.T01:intron 20.0%
!! TAGAGAAAAAAACGATAAAA+TGG + Chr5:23250246-23250265 MsG0580025726.01.T01:CDS 20.0%
!! TATAATTGAGAGAAACATAT+AGG - Chr5:23250470-23250489 None:intergenic 20.0%
!! TATATGTTTCTCTCAATTAT+AGG + Chr5:23250469-23250488 MsG0580025726.01.T01:intron 20.0%
!! TATGAATGCATCAATAATAA+TGG + Chr5:23247720-23247739 MsG0580025726.01.T01:intron 20.0%
!! TATTAAAGAATGTTGTTCTA+GGG + Chr5:23247371-23247390 MsG0580025726.01.T01:intron 20.0%
!! TCTTGTGAAAATTTATTGTA+AGG + Chr5:23253192-23253211 MsG0580025726.01.T01:intron 20.0%
!! TGTTTAGAAACTATATACTA+TGG - Chr5:23250392-23250411 None:intergenic 20.0%
!! TTACTCATGATATAATTCTT+TGG + Chr5:23247415-23247434 MsG0580025726.01.T01:intron 20.0%
!! TTATTAAAGAATGTTGTTCT+AGG + Chr5:23247370-23247389 MsG0580025726.01.T01:intron 20.0%
!! TTTATATAATCCTATGCAAA+TGG + Chr5:23248060-23248079 MsG0580025726.01.T01:intron 20.0%
!!! AATTATTATCTGTCATTTGT+AGG - Chr5:23247769-23247788 None:intergenic 20.0%
!!! ATCAAATTTTTAGAGCTAAT+AGG + Chr5:23251574-23251593 MsG0580025726.01.T01:intron 20.0%
!!! ATTTTTAACACTCACAAATT+TGG - Chr5:23247096-23247115 None:intergenic 20.0%
!!! CTAATTTTCTTTCTTAAAGA+GGG - Chr5:23249628-23249647 None:intergenic 20.0%
!!! GAATTAGTTTATGTATTTAC+GGG - Chr5:23249082-23249101 None:intergenic 20.0%
!!! GATTTGTATTTTTTTTTTGG+AGG - Chr5:23249034-23249053 None:intergenic 20.0%
!!! GATTTTTTGTTGTTTATGTT+TGG + Chr5:23252263-23252282 MsG0580025726.01.T01:intron 20.0%
!!! TAGAAATTTGTTTTATTCCT+AGG + Chr5:23251264-23251283 MsG0580025726.01.T01:intron 20.0%
!!! TCTAATTTTCTTTCTTAAAG+AGG - Chr5:23249629-23249648 None:intergenic 20.0%
!!! TTATCTTTTCTTTTAGCAAT+AGG - Chr5:23248114-23248133 None:intergenic 20.0%
!!! TTTTTTCTCTCATAAATGAA+GGG + Chr5:23250060-23250079 MsG0580025726.01.T01:intron 20.0%
!!! TTTTTTTCTCTCATAAATGA+AGG + Chr5:23250059-23250078 MsG0580025726.01.T01:intron 20.0%
! AAAAAACGATAAAATGGTGT+AGG + Chr5:23250252-23250271 MsG0580025726.01.T01:CDS 25.0%
! AAGAGAATATATAGAAAGAG+GGG + Chr5:23246976-23246995 MsG0580025726.01.T01:intron 25.0%
! AAGAGAATATATCAAAAGAG+GGG + Chr5:23247649-23247668 MsG0580025726.01.T01:intron 25.0%
! AAGATAAAGTCACTTAAATG+AGG - Chr5:23252043-23252062 None:intergenic 25.0%
! AATATTCTATAGCAACACAA+TGG - Chr5:23252383-23252402 None:intergenic 25.0%
! AATGAAAACAAATCCAATGA+AGG - Chr5:23253168-23253187 None:intergenic 25.0%
! AATTTATTCCACTCATTAGT+CGG - Chr5:23251363-23251382 None:intergenic 25.0%
! AGAAAATGCTTATGTAGTTA+TGG + Chr5:23253401-23253420 MsG0580025726.01.T01:CDS 25.0%
! AGAGAAATGAAGAATGAAAT+GGG - Chr5:23249416-23249435 None:intergenic 25.0%
! AGGGTAAAATAGTAAAAAAC+AGG - Chr5:23249315-23249334 None:intergenic 25.0%
! ATAAATCAAGCTCATACTTA+TGG + Chr5:23250186-23250205 MsG0580025726.01.T01:intron 25.0%
! ATAATAGAGAACAATTCCTA+CGG + Chr5:23252532-23252551 MsG0580025726.01.T01:intron 25.0%
! ATGAAAAATCTCTTTCAACT+TGG - Chr5:23249191-23249210 None:intergenic 25.0%
! ATGAATGCATCAACAATAAT+GGG + Chr5:23247987-23248006 MsG0580025726.01.T01:intron 25.0%
! ATTCTCTTCCTTTAATACAT+GGG - Chr5:23247637-23247656 None:intergenic 25.0%
! ATTTACTAAATGAGAACACA+GGG - Chr5:23247810-23247829 None:intergenic 25.0%
! CCAAAAAAAAAAAATGTGCA+GGG + Chr5:23251220-23251239 MsG0580025726.01.T01:intron 25.0%
! CTTGAAACAAAGAAATAGAT+AGG + Chr5:23247693-23247712 MsG0580025726.01.T01:intron 25.0%
! CTTGGTTGTAATTGTTATAT+TGG - Chr5:23247581-23247600 None:intergenic 25.0%
! GAAAAAAATCTCTTTCAACT+TGG - Chr5:23247599-23247618 None:intergenic 25.0%
! GAAAATGCTTATGTAGTTAT+GGG + Chr5:23253402-23253421 MsG0580025726.01.T01:CDS 25.0%
! GAAACATATTGCAATTCATT+TGG - Chr5:23250439-23250458 None:intergenic 25.0%
! GAAGAAAATAATGCATAATG+AGG + Chr5:23252164-23252183 MsG0580025726.01.T01:intron 25.0%
! GAAGAGAATATATAGAAAGA+GGG + Chr5:23246975-23246994 MsG0580025726.01.T01:intron 25.0%
! GAAGAGAATATATCAAAAGA+GGG + Chr5:23247648-23247667 MsG0580025726.01.T01:intron 25.0%
! GCTCTTTGTTCTTATATATT+TGG + Chr5:23253258-23253277 MsG0580025726.01.T01:intron 25.0%
! GGGTAAAATAGTAAAAAACA+GGG - Chr5:23249314-23249333 None:intergenic 25.0%
! GTATGAATTTCTAAGTTGTT+TGG + Chr5:23249993-23250012 MsG0580025726.01.T01:intron 25.0%
! GTCAAAATTATTGTCTCAAA+TGG + Chr5:23252491-23252510 MsG0580025726.01.T01:intron 25.0%
! TATGAATGCATCAACAATAA+TGG + Chr5:23247986-23248005 MsG0580025726.01.T01:intron 25.0%
! TATTCTCTTCCTTTAATACA+TGG - Chr5:23247638-23247657 None:intergenic 25.0%
! TCATTTAAGTGACTTTATCT+TGG + Chr5:23252042-23252061 MsG0580025726.01.T01:intron 25.0%
! TCCAAAAAAAAAAAATGTGC+AGG + Chr5:23251219-23251238 MsG0580025726.01.T01:intron 25.0%
! TCTCATCTACAAAACTATAT+AGG + Chr5:23249277-23249296 MsG0580025726.01.T01:intron 25.0%
! TGGCTTATTATCAATATACA+TGG + Chr5:23247901-23247920 MsG0580025726.01.T01:intron 25.0%
! TTCTCTCAATTATAGGAAAT+GGG + Chr5:23250476-23250495 MsG0580025726.01.T01:intron 25.0%
! TTGGAAAAATCTTGAAATTG+TGG + Chr5:23253099-23253118 MsG0580025726.01.T01:intron 25.0%
! TTGTCCAAAAAAAATCATTC+TGG - Chr5:23247342-23247361 None:intergenic 25.0%
! TTTATGTATTTACGGGTAAA+AGG - Chr5:23249075-23249094 None:intergenic 25.0%
! TTTCTCTCAATTATAGGAAA+TGG + Chr5:23250475-23250494 MsG0580025726.01.T01:intron 25.0%
!! AAAAAACTTTTCCACATAGA+AGG - Chr5:23248552-23248571 None:intergenic 25.0%
!! AAAAATATTTTCCACGTAGA+AGG - Chr5:23248388-23248407 None:intergenic 25.0%
!! AATGCAGTTGTTGATTATTA+GGG + Chr5:23253010-23253029 MsG0580025726.01.T01:intron 25.0%
!! AGCATTTTTATATGGTTTCT+TGG + Chr5:23251912-23251931 MsG0580025726.01.T01:intron 25.0%
!! ATTATACTCTTCCTTTTATG+TGG + Chr5:23248228-23248247 MsG0580025726.01.T01:intron 25.0%
!! CTAATGAGTGGAATAAATTT+TGG + Chr5:23251364-23251383 MsG0580025726.01.T01:intron 25.0%
!! GATATAATTCTTTGGTTCAT+CGG + Chr5:23247423-23247442 MsG0580025726.01.T01:intron 25.0%
!! TAATGCAGTTGTTGATTATT+AGG + Chr5:23253009-23253028 MsG0580025726.01.T01:intron 25.0%
!! TTATTGTCTCAAATGGTTTT+AGG + Chr5:23252498-23252517 MsG0580025726.01.T01:intron 25.0%
!! TTTAAAACTCACAAATTTGG+AGG - Chr5:23248020-23248039 None:intergenic 25.0%
!! TTTACTATTTTACCCTTACA+GGG + Chr5:23249319-23249338 MsG0580025726.01.T01:intron 25.0%
!! TTTGTGCTAGCATTTTTATA+TGG + Chr5:23251904-23251923 MsG0580025726.01.T01:intron 25.0%
!! TTTTACTATTTTACCCTTAC+AGG + Chr5:23249318-23249337 MsG0580025726.01.T01:intron 25.0%
!! TTTTATGGGGATAAACTAAA+AGG - Chr5:23247132-23247151 None:intergenic 25.0%
!!! ATGATTTGGATACTTTTGAA+GGG + Chr5:23251858-23251877 MsG0580025726.01.T01:intron 25.0%
!!! ATGATTTTAACCATTTGCAT+AGG - Chr5:23248073-23248092 None:intergenic 25.0%
!!! ATTTTTCGATAGATTACATG+AGG + Chr5:23253140-23253159 MsG0580025726.01.T01:intron 25.0%
!!! TAAATACTGATTTGATTGTG+AGG - Chr5:23246660-23246679 None:intergenic 25.0%
!!! TAGTTAGTTTTTTGTAATGG+AGG + Chr5:23252718-23252737 MsG0580025726.01.T01:intron 25.0%
!!! TTTGTTTTGTATCTTTTCCT+GGG + Chr5:23251724-23251743 MsG0580025726.01.T01:intron 25.0%
!!! TTTTGTTTTGTATCTTTTCC+TGG + Chr5:23251723-23251742 MsG0580025726.01.T01:intron 25.0%
!!! TTTTTTTAAAGGAGTAACTG+TGG + Chr5:23248810-23248829 MsG0580025726.01.T01:intron 25.0%
AAAAAAAAAAATGTGCAGGG+AGG + Chr5:23251223-23251242 MsG0580025726.01.T01:intron 30.0%
AAAAAAAAAATGTGCAGGGA+GGG + Chr5:23251224-23251243 MsG0580025726.01.T01:intron 30.0%
AAAATATTCAAAGTGAAGGG+AGG + Chr5:23252685-23252704 MsG0580025726.01.T01:intron 30.0%
AAACTAACTCTTTAGTTGGA+TGG + Chr5:23247500-23247519 MsG0580025726.01.T01:intron 30.0%
AAATATTCAAAGTGAAGGGA+GGG + Chr5:23252686-23252705 MsG0580025726.01.T01:intron 30.0%
AAGAGATGTTTGTACTTTGT+AGG + Chr5:23246906-23246925 MsG0580025726.01.T01:intron 30.0%
AATATATAGAAAGAGGGGTA+AGG + Chr5:23246981-23247000 MsG0580025726.01.T01:intron 30.0%
AATATATCAAAAGAGGGGTA+AGG + Chr5:23247654-23247673 MsG0580025726.01.T01:intron 30.0%
AATTAGATGAATTGAGGTGA+AGG - Chr5:23249490-23249509 None:intergenic 30.0%
ACTCCATATATATAGGGAAA+AGG - Chr5:23249371-23249390 None:intergenic 30.0%
ACTTATATCTATCTCGATTG+TGG + Chr5:23250791-23250810 MsG0580025726.01.T01:intron 30.0%
AGAGAAACATATAGGTATGA+AGG - Chr5:23250462-23250481 None:intergenic 30.0%
AGTAATAGTAGAGGAAAAGA+TGG + Chr5:23250858-23250877 MsG0580025726.01.T01:intron 30.0%
ATAATCTTCATCGTCAGAAT+CGG - Chr5:23250684-23250703 None:intergenic 30.0%
ATGACCTTTCCTTTAATACA+TGG - Chr5:23249228-23249247 None:intergenic 30.0%
ATTCCCATGTATTAAAGGAA+AGG + Chr5:23247631-23247650 MsG0580025726.01.T01:intron 30.0%
ATTTATTCCACTCATTAGTC+GGG - Chr5:23251362-23251381 None:intergenic 30.0%
CACAATAACATGAATACCAA+TGG + Chr5:23250990-23251009 MsG0580025726.01.T01:CDS 30.0%
CATACCACTCCATATATATA+GGG - Chr5:23249377-23249396 None:intergenic 30.0%
CATCACTTCAAAAGTAATTG+TGG + Chr5:23247196-23247215 MsG0580025726.01.T01:intron 30.0%
CATTTACTAAATGAGAACAC+AGG - Chr5:23247811-23247830 None:intergenic 30.0%
CTAACTATTGAAAGCAATGT+GGG + Chr5:23252836-23252855 MsG0580025726.01.T01:intron 30.0%
CTGTGTTCTCATTTAGTAAA+TGG + Chr5:23247809-23247828 MsG0580025726.01.T01:intron 30.0%
GAGAAACATATAGGTATGAA+GGG - Chr5:23250461-23250480 None:intergenic 30.0%
GAGAAATGAAGAATGAAATG+GGG - Chr5:23249415-23249434 None:intergenic 30.0%
GAGAGAAATGAAGAATGAAA+TGG - Chr5:23249417-23249436 None:intergenic 30.0%
GCATAAACTAACTCTTTAGT+TGG + Chr5:23247496-23247515 MsG0580025726.01.T01:intron 30.0%
GGAAGAGAATATATAGAAAG+AGG + Chr5:23246974-23246993 MsG0580025726.01.T01:intron 30.0%
GGAAGAGAATATATCAAAAG+AGG + Chr5:23247647-23247666 MsG0580025726.01.T01:intron 30.0%
TAAGAAAGAGGTTAGTGAAT+CGG + Chr5:23250742-23250761 MsG0580025726.01.T01:CDS 30.0%
TAATGCATAATGAGGATCAT+TGG + Chr5:23252172-23252191 MsG0580025726.01.T01:intron 30.0%
TCAATGGGCAACATAATTAT+CGG - Chr5:23246700-23246719 None:intergenic 30.0%
TCATACCACTCCATATATAT+AGG - Chr5:23249378-23249397 None:intergenic 30.0%
TCTAAAAGAAGTAGTTGAAG+TGG + Chr5:23249765-23249784 MsG0580025726.01.T01:intron 30.0%
TCTTATCCGAGCAATATTTA+CGG + Chr5:23251409-23251428 MsG0580025726.01.T01:CDS 30.0%
TGAAATTGTGGATAGATAAG+TGG + Chr5:23253111-23253130 MsG0580025726.01.T01:intron 30.0%
TGACCTTTCCTTTAATACAT+GGG - Chr5:23249227-23249246 None:intergenic 30.0%
TGGGTGAAAATGTAAATTAC+AGG + Chr5:23250495-23250514 MsG0580025726.01.T01:intron 30.0%
TTATGTGAGGAACAATGTAT+AGG - Chr5:23250555-23250574 None:intergenic 30.0%
TTCGTCATTGCAAACATAAA+AGG - Chr5:23248646-23248665 None:intergenic 30.0%
TTGGACATGTTCTGATATTT+GGG + Chr5:23250012-23250031 MsG0580025726.01.T01:intron 30.0%
TTGTTCTCATTTCTAATTGC+AGG - Chr5:23252596-23252615 None:intergenic 30.0%
TTTAACACTCACAAATTTGG+AGG - Chr5:23247093-23247112 None:intergenic 30.0%
TTTCTTTCTTAAAGAGGGTT+CGG - Chr5:23249623-23249642 None:intergenic 30.0%
TTTGGACATGTTCTGATATT+TGG + Chr5:23250011-23250030 MsG0580025726.01.T01:intron 30.0%
! AAGATATTGAGAGCTCTAAT+CGG + Chr5:23253336-23253355 MsG0580025726.01.T01:CDS 30.0%
! GTTTTCGATTGCATTGTTAT+AGG + Chr5:23252285-23252304 MsG0580025726.01.T01:intron 30.0%
! TGATGTTGATTATCTAGAGT+TGG + Chr5:23252888-23252907 MsG0580025726.01.T01:intron 30.0%
! TTACTATTTTACCCTTACAG+GGG + Chr5:23249320-23249339 MsG0580025726.01.T01:intron 30.0%
! TTGTAGAAATTCCCTTTTTG+TGG + Chr5:23252131-23252150 MsG0580025726.01.T01:intron 30.0%
! TTTTCCCTATATATATGGAG+TGG + Chr5:23249370-23249389 MsG0580025726.01.T01:intron 30.0%
! TTTTCTTAAAGCAGTAACTG+TGG + Chr5:23247222-23247241 MsG0580025726.01.T01:intron 30.0%
!! ATCTTGGTTTGTGTTTATGA+TGG + Chr5:23250833-23250852 MsG0580025726.01.T01:intron 30.0%
!! CAATAATTTTGACATACCGT+AGG - Chr5:23252484-23252503 None:intergenic 30.0%
!! CATGATTTGGATACTTTTGA+AGG + Chr5:23251857-23251876 MsG0580025726.01.T01:intron 30.0%
!! TCTTGGTTTGTGTTTATGAT+GGG + Chr5:23250834-23250853 MsG0580025726.01.T01:intron 30.0%
!! TGATTTGGATACTTTTGAAG+GGG + Chr5:23251859-23251878 MsG0580025726.01.T01:intron 30.0%
!! TTCTAGTTTAGTTTGCCAAT+TGG - Chr5:23249559-23249578 None:intergenic 30.0%
!! TTGTGAAGAAGTGTTTCATA+AGG - Chr5:23250975-23250994 None:intergenic 30.0%
!!! AATGGTTTTAGGTGATGTAT+AGG + Chr5:23252509-23252528 MsG0580025726.01.T01:intron 30.0%
!!! ACTCTTTTTTCAATAGCAAC+AGG - Chr5:23250648-23250667 None:intergenic 30.0%
!!! CCCTGCACATTTTTTTTTTT+TGG - Chr5:23251223-23251242 None:intergenic 30.0%
!!! CGAGCTTTTAAGTTTTTACT+TGG + Chr5:23253080-23253099 MsG0580025726.01.T01:intron 30.0%
!!! GTACTAGTTTTTCTCATCTT+AGG - Chr5:23246833-23246852 None:intergenic 30.0%
!!! TGAGCCAGAATGATTTTTTT+TGG + Chr5:23247335-23247354 MsG0580025726.01.T01:intron 30.0%
!!! TTTGTTTTTGCTGCATGATT+TGG + Chr5:23251844-23251863 MsG0580025726.01.T01:intron 30.0%
AAAAACTAGTACTGCTGCAT+AGG + Chr5:23246841-23246860 MsG0580025726.01.T01:intron 35.0%
AAACGATAAAATGGTGTAGG+AGG + Chr5:23250255-23250274 MsG0580025726.01.T01:CDS 35.0%
AAAGAAGTAGTTGAAGTGGA+AGG + Chr5:23249769-23249788 MsG0580025726.01.T01:intron 35.0%
AAGGTTATGGGTGATCAAAA+AGG + Chr5:23249889-23249908 MsG0580025726.01.T01:intron 35.0%
AATATTCAAAGTGAAGGGAG+GGG + Chr5:23252687-23252706 MsG0580025726.01.T01:intron 35.0%
AATGGGCAACATAATTATCG+GGG - Chr5:23246698-23246717 None:intergenic 35.0%
AATTCGCCACATGTTATGTT+TGG + Chr5:23252079-23252098 MsG0580025726.01.T01:intron 35.0%
ACCTTTCCAAACATAACATG+TGG - Chr5:23252088-23252107 None:intergenic 35.0%
ACTTGAAACAAACAAGTGGT+TGG + Chr5:23247019-23247038 MsG0580025726.01.T01:intron 35.0%
AGGTTATGGGTGATCAAAAA+GGG + Chr5:23249890-23249909 MsG0580025726.01.T01:intron 35.0%
ATAGGCATATTCCAAGAAAG+TGG + Chr5:23251592-23251611 MsG0580025726.01.T01:intron 35.0%
ATAGTGATATACCTGAAGTC+CGG - Chr5:23250351-23250370 None:intergenic 35.0%
ATATGAGAAGTTGAGAGTAG+TGG + Chr5:23246936-23246955 MsG0580025726.01.T01:intron 35.0%
ATCCTTCCGTAAATATTGCT+CGG - Chr5:23251418-23251437 None:intergenic 35.0%
ATGCTTATGTAGTTATGGGA+CGG + Chr5:23253406-23253425 MsG0580025726.01.T01:CDS 35.0%
ATGGGGTTAAGATAACAATG+GGG + Chr5:23247056-23247075 MsG0580025726.01.T01:intron 35.0%
ATTATACCCTTCCTTCTATG+TGG + Chr5:23248538-23248557 MsG0580025726.01.T01:intron 35.0%
ATTATACTCTTCCTTCTACG+TGG + Chr5:23248374-23248393 MsG0580025726.01.T01:intron 35.0%
ATTGTGGATAGATAAGTGGT+TGG + Chr5:23253115-23253134 MsG0580025726.01.T01:intron 35.0%
CAAATGTATCAACCTTCTCA+AGG - Chr5:23252435-23252454 None:intergenic 35.0%
CAATATCAGCATGTCAAATG+TGG - Chr5:23251327-23251346 None:intergenic 35.0%
CAATGGGCAACATAATTATC+GGG - Chr5:23246699-23246718 None:intergenic 35.0%
CAATGTGAACCTCTCAAAAA+TGG - Chr5:23247865-23247884 None:intergenic 35.0%
CAGTATTTATGTTGCCCATT+GGG + Chr5:23246671-23246690 MsG0580025726.01.T01:CDS 35.0%
CATGGGGTTAAGATAACAAT+GGG + Chr5:23247055-23247074 MsG0580025726.01.T01:intron 35.0%
CTATTAATGCAGTCGATGAT+GGG + Chr5:23250321-23250340 MsG0580025726.01.T01:CDS 35.0%
CTCCAAAAACACCACAAAAA+GGG - Chr5:23252145-23252164 None:intergenic 35.0%
CTTGAAACAAACAAGTGGTT+GGG + Chr5:23247020-23247039 MsG0580025726.01.T01:intron 35.0%
GAAATCAGTTCCAATTCCTA+CGG + Chr5:23252465-23252484 MsG0580025726.01.T01:CDS 35.0%
GAAGCAAGAATCAATGATTG+AGG + Chr5:23249971-23249990 MsG0580025726.01.T01:intron 35.0%
GATAATTATGTTGCCCATTG+AGG + Chr5:23246699-23246718 MsG0580025726.01.T01:CDS 35.0%
GCAAAAACAAAATGCACAGA+TGG - Chr5:23251835-23251854 None:intergenic 35.0%
GCTAACTATTGAAAGCAATG+TGG + Chr5:23252835-23252854 MsG0580025726.01.T01:intron 35.0%
GTGATCAAAAAGGGTTTCAA+GGG + Chr5:23249899-23249918 MsG0580025726.01.T01:intron 35.0%
TAAAGAGCTTGCAAATATGC+AGG + Chr5:23252912-23252931 MsG0580025726.01.T01:intron 35.0%
TAAGATTAAGATAGCAAGGC+AGG - Chr5:23247933-23247952 None:intergenic 35.0%
TAAGGATCAATGTTCATCGA+TGG + Chr5:23253210-23253229 MsG0580025726.01.T01:intron 35.0%
TCAGTATTTATGTTGCCCAT+TGG + Chr5:23246670-23246689 MsG0580025726.01.T01:CDS 35.0%
TCTAATCGGGCATAAGAATT+TGG + Chr5:23253350-23253369 MsG0580025726.01.T01:CDS 35.0%
TCTCATTTCTAATTGCAGGA+AGG - Chr5:23252592-23252611 None:intergenic 35.0%
TCTCCAAAAACACCACAAAA+AGG - Chr5:23252146-23252165 None:intergenic 35.0%
TGAAGAAGAGAAGAAACTTG+TGG + Chr5:23250715-23250734 MsG0580025726.01.T01:CDS 35.0%
TGATCAAAAAGGGTTTCAAG+GGG + Chr5:23249900-23249919 MsG0580025726.01.T01:intron 35.0%
TGATTGTGAGGTAAAGATGA+CGG - Chr5:23246648-23246667 None:intergenic 35.0%
TGGGTATTCCCATGTATTAA+AGG + Chr5:23247626-23247645 MsG0580025726.01.T01:intron 35.0%
TTACCAAAATACCCCTGTAA+GGG - Chr5:23249334-23249353 None:intergenic 35.0%
TTCTTGGTATGCCAGAAAAT+TGG + Chr5:23251928-23251947 MsG0580025726.01.T01:intron 35.0%
TTGAGAGGTTCACATTGTAA+AGG + Chr5:23247868-23247887 MsG0580025726.01.T01:intron 35.0%
TTGTGGATAGATAAGTGGTT+GGG + Chr5:23253116-23253135 MsG0580025726.01.T01:intron 35.0%
TTTACCAAAATACCCCTGTA+AGG - Chr5:23249335-23249354 None:intergenic 35.0%
TTTATGCATTTGCGCGTAAA+AGG - Chr5:23247483-23247502 None:intergenic 35.0%
TTTCAAGGGGATATTAGAAG+TGG + Chr5:23249913-23249932 MsG0580025726.01.T01:intron 35.0%
TTTGAACTTTAGTACCCACA+AGG + Chr5:23250112-23250131 MsG0580025726.01.T01:intron 35.0%
! AAAGGGAAGTACAAAACCAT+TGG - Chr5:23251009-23251028 None:intergenic 35.0%
! AACTTTTCCACATAGAAGGA+AGG - Chr5:23248548-23248567 None:intergenic 35.0%
! AAGTGGTTTTTGCTGCTATT+TGG + Chr5:23249930-23249949 MsG0580025726.01.T01:intron 35.0%
! ACTTTTCCACATAGAAGGAA+GGG - Chr5:23248547-23248566 None:intergenic 35.0%
! AGATATTGAGAGCTCTAATC+GGG + Chr5:23253337-23253356 MsG0580025726.01.T01:CDS 35.0%
! AGCATTTTCTTCGTCTTCAT+AGG - Chr5:23253391-23253410 None:intergenic 35.0%
! ATTACATGAGGTACCTTCAT+TGG + Chr5:23253152-23253171 MsG0580025726.01.T01:intron 35.0%
! ATTTACGGGTAAAAGGTATG+CGG - Chr5:23249068-23249087 None:intergenic 35.0%
! CACTTCTGAAGAAATAACTC+AGG + Chr5:23251544-23251563 MsG0580025726.01.T01:CDS 35.0%
! CTAAAAGGAAGTATGTCTTG+TGG - Chr5:23248703-23248722 None:intergenic 35.0%
! CTGAAGATTTTTCATTCGAG+TGG + Chr5:23252011-23252030 MsG0580025726.01.T01:intron 35.0%
! CTGCCTTTTCCCTATATATA+TGG + Chr5:23249365-23249384 MsG0580025726.01.T01:intron 35.0%
! GAGGGGAAGAAATTTAAAGT+TGG - Chr5:23249583-23249602 None:intergenic 35.0%
! TCATTATGGGACCAATTTTC+TGG - Chr5:23251942-23251961 None:intergenic 35.0%
! TCTGAAGCGAGGTATAAATA+TGG + Chr5:23251472-23251491 MsG0580025726.01.T01:CDS 35.0%
! TTCCCTTTTTGTGGTGTTTT+TGG + Chr5:23252140-23252159 MsG0580025726.01.T01:intron 35.0%
! TTTTGACATACCGTAGGAAT+TGG - Chr5:23252478-23252497 None:intergenic 35.0%
!! AACTAAGTTGTTCTGAGACT+AGG + Chr5:23249857-23249876 MsG0580025726.01.T01:intron 35.0%
!! AAGGAACTTCTGGAATTAAC+AGG + Chr5:23250883-23250902 MsG0580025726.01.T01:CDS 35.0%
!! ACTAAGTTGTTCTGAGACTA+GGG + Chr5:23249858-23249877 MsG0580025726.01.T01:intron 35.0%
!! ACTGTGTTACCATTTTTGAG+AGG + Chr5:23247853-23247872 MsG0580025726.01.T01:intron 35.0%
!! AGGAACTTCTGGAATTAACA+GGG + Chr5:23250884-23250903 MsG0580025726.01.T01:CDS 35.0%
!! AGTTTTGTAGATGAGAACAC+AGG - Chr5:23249273-23249292 None:intergenic 35.0%
!! CTTGGTTTGTGTTTATGATG+GGG + Chr5:23250835-23250854 MsG0580025726.01.T01:intron 35.0%
!! GATTTGGATACTTTTGAAGG+GGG + Chr5:23251860-23251879 MsG0580025726.01.T01:intron 35.0%
!! TGAGTGGAATAAATTTTGGC+AGG + Chr5:23251368-23251387 MsG0580025726.01.T01:intron 35.0%
!!! AGAGGTTTTGGAGTTTTGAA+AGG + Chr5:23246882-23246901 MsG0580025726.01.T01:intron 35.0%
!!! GAGGTTTTGGAGTTTTGAAA+GGG + Chr5:23246883-23246902 MsG0580025726.01.T01:intron 35.0%
!!! TTTGTTTTATTCCTAGGACG+CGG + Chr5:23251270-23251289 MsG0580025726.01.T01:intron 35.0%
AAAACATTGCATGTGAAGCC+TGG + Chr5:23249673-23249692 MsG0580025726.01.T01:intron 40.0%
AAACCTCTCGACCACAAAAT+TGG - Chr5:23246870-23246889 None:intergenic 40.0%
AAAGATGGTGAAGGAACTTC+TGG + Chr5:23250873-23250892 MsG0580025726.01.T01:CDS 40.0%
AACAACACAACAAATCAGCC+AGG - Chr5:23249694-23249713 None:intergenic 40.0%
AACACTCACAAATTTGGAGG+AGG - Chr5:23247090-23247109 None:intergenic 40.0%
AATGAGAACAAGTCGACATG+AGG + Chr5:23252605-23252624 MsG0580025726.01.T01:intron 40.0%
AATTGCATTAGGTGCAGCTA+AGG + Chr5:23252953-23252972 MsG0580025726.01.T01:intron 40.0%
AGAGAAGAAGAGAGAACAGA+GGG - Chr5:23249452-23249471 None:intergenic 40.0%
AGATGAATTGAGGTGAAGGA+TGG - Chr5:23249486-23249505 None:intergenic 40.0%
AGGGGTAAGGTTTAGGAAAT+GGG + Chr5:23246994-23247013 MsG0580025726.01.T01:intron 40.0%
AGTAGAGGAAAAGATGGTGA+AGG + Chr5:23250864-23250883 MsG0580025726.01.T01:intron 40.0%
ATAATTATCGGGGTCCCAAT+GGG - Chr5:23246688-23246707 None:intergenic 40.0%
ATCCGAGCAATATTTACGGA+AGG + Chr5:23251413-23251432 MsG0580025726.01.T01:CDS 40.0%
ATTGGTGGGAGATAGATAGA+TGG + Chr5:23252190-23252209 MsG0580025726.01.T01:intron 40.0%
CTAACCTGTTGCATGACAAA+GGG - Chr5:23251026-23251045 None:intergenic 40.0%
GACAACAGCAATTGCTATAG+AGG + Chr5:23253296-23253315 MsG0580025726.01.T01:CDS 40.0%
GATAAGAACTGTAGCACAAG+TGG - Chr5:23251396-23251415 None:intergenic 40.0%
GCATAATGAGGATCATTGGT+GGG + Chr5:23252176-23252195 MsG0580025726.01.T01:intron 40.0%
GCATGGGGTTAAGATAACAA+TGG + Chr5:23247054-23247073 MsG0580025726.01.T01:intron 40.0%
GCCAATTGGAGTGTGAAAAT+GGG - Chr5:23249545-23249564 None:intergenic 40.0%
GCCACATGTTATGTTTGGAA+AGG + Chr5:23252084-23252103 MsG0580025726.01.T01:intron 40.0%
GCTATTAATGCAGTCGATGA+TGG + Chr5:23250320-23250339 MsG0580025726.01.T01:CDS 40.0%
GGGTTTATACATCATACCGT+AGG - Chr5:23252551-23252570 None:intergenic 40.0%
GGTGATCAAAAAGGGTTTCA+AGG + Chr5:23249898-23249917 MsG0580025726.01.T01:intron 40.0%
GTATAGTCACATATACACCC+AGG - Chr5:23251744-23251763 None:intergenic 40.0%
TAACATATATACCGCGTCCT+AGG - Chr5:23251284-23251303 None:intergenic 40.0%
TAACTTATGCCCCACTGTAT+AGG + Chr5:23250602-23250621 MsG0580025726.01.T01:intron 40.0%
TAATGAAGTTGCAGGAGGAA+TGG + Chr5:23251956-23251975 MsG0580025726.01.T01:intron 40.0%
TAGAAAGAGGGGTAAGGTTT+AGG + Chr5:23246987-23247006 MsG0580025726.01.T01:intron 40.0%
TATACTTCTCTTGAGCACCA+TGG + Chr5:23246738-23246757 MsG0580025726.01.T01:intron 40.0%
TCAAAAGAGGGGTAAGGTTT+AGG + Chr5:23247660-23247679 MsG0580025726.01.T01:intron 40.0%
TCCTCCTGCAACTTCATTAT+GGG - Chr5:23251955-23251974 None:intergenic 40.0%
TCTAACCTGTTGCATGACAA+AGG - Chr5:23251027-23251046 None:intergenic 40.0%
TGCATAATGAGGATCATTGG+TGG + Chr5:23252175-23252194 MsG0580025726.01.T01:intron 40.0%
TGCCAATTGGAGTGTGAAAA+TGG - Chr5:23249546-23249565 None:intergenic 40.0%
TGCTGAAGCAAAGAGCAATT+AGG + Chr5:23252763-23252782 MsG0580025726.01.T01:intron 40.0%
TGGTTCTTGTGCAAAACAAG+AGG + Chr5:23246796-23246815 MsG0580025726.01.T01:intron 40.0%
TTATGTAGTTATGGGACGGA+GGG + Chr5:23253410-23253429 MsG0580025726.01.T01:CDS 40.0%
TTCCTCCTGCAACTTCATTA+TGG - Chr5:23251956-23251975 None:intergenic 40.0%
TTCGGCTGAGAGGAATAAAA+GGG - Chr5:23249605-23249624 None:intergenic 40.0%
TTCTTGTGCAAAACAAGAGG+TGG + Chr5:23246799-23246818 MsG0580025726.01.T01:intron 40.0%
TTTCTCGTGCGTCTTACTTT+CGG + Chr5:23251187-23251206 MsG0580025726.01.T01:intron 40.0%
TTTGGTTGCTTCAAGAGCTT+GGG + Chr5:23249712-23249731 MsG0580025726.01.T01:intron 40.0%
! AAGGAAGTATGTCTTGTGGT+TGG - Chr5:23248699-23248718 None:intergenic 40.0%
! AGAAAGCTAGGGCTTTATCA+AGG + Chr5:23249797-23249816 MsG0580025726.01.T01:intron 40.0%
! AGGAATTGGAACTGATTTCG+AGG - Chr5:23252464-23252483 None:intergenic 40.0%
! ATGATGGGGAGTAATAGTAG+AGG + Chr5:23250849-23250868 MsG0580025726.01.T01:intron 40.0%
! ATTTTGTGGTCGAGAGGTTT+TGG + Chr5:23246870-23246889 MsG0580025726.01.T01:intron 40.0%
! TAGTGGACAATGAACGGAAA+AGG + Chr5:23246953-23246972 MsG0580025726.01.T01:intron 40.0%
! TCCCATTTTCACACTCCAAT+TGG + Chr5:23249541-23249560 MsG0580025726.01.T01:intron 40.0%
! TGCATAGGAAGCCAATTTTG+TGG + Chr5:23246856-23246875 MsG0580025726.01.T01:intron 40.0%
!! GGCTGATTTGTTGTGTTGTT+TGG + Chr5:23249694-23249713 MsG0580025726.01.T01:intron 40.0%
!! TCTAATTGCAGGAAGGTGTT+CGG - Chr5:23252585-23252604 None:intergenic 40.0%
!! TGAGAGTAGTGGACAATGAA+CGG + Chr5:23246947-23246966 MsG0580025726.01.T01:intron 40.0%
!! TGTTCTAGGGTTCTTTCTCT+CGG + Chr5:23248975-23248994 MsG0580025726.01.T01:intron 40.0%
!!! TCTTGTTTTGCACAAGAACC+AGG - Chr5:23246797-23246816 None:intergenic 40.0%
!!! TTACCCTTACAGGGGTATTT+TGG + Chr5:23249328-23249347 MsG0580025726.01.T01:intron 40.0%
AAGAAGAGAGAACAGAGGGA+GGG - Chr5:23249448-23249467 None:intergenic 45.0%
AATGGTGTAGGAGGATACTC+AGG + Chr5:23250264-23250283 MsG0580025726.01.T01:CDS 45.0%
ACGTTTCCACAAACACCTTG+TGG - Chr5:23250130-23250149 None:intergenic 45.0%
ACTTCCCTTTGTCATGCAAC+AGG + Chr5:23251019-23251038 MsG0580025726.01.T01:intron 45.0%
ACTTGTGGCTGCTAAGAAAG+AGG + Chr5:23250730-23250749 MsG0580025726.01.T01:CDS 45.0%
AGAAAGTGGTGACAACCTCA+AGG + Chr5:23251606-23251625 MsG0580025726.01.T01:intron 45.0%
AGCAGCTGGAATGAATGCAA+TGG + Chr5:23251448-23251467 MsG0580025726.01.T01:CDS 45.0%
AGGCTTTGCATCCTATACAG+TGG - Chr5:23250616-23250635 None:intergenic 45.0%
AGGGGTAAGGTTTAGGAAGT+GGG + Chr5:23247667-23247686 MsG0580025726.01.T01:intron 45.0%
AGTAAGACGCACGAGAAACT+TGG - Chr5:23251185-23251204 None:intergenic 45.0%
ATAGCAACAGGCTTAGACAC+AGG - Chr5:23250636-23250655 None:intergenic 45.0%
ATGGTGAAGGCAGTCCTAAT+GGG - Chr5:23246595-23246614 None:intergenic 45.0%
ATTAGGACTGCCTTCACCAT+CGG + Chr5:23246595-23246614 MsG0580025726.01.T01:CDS 45.0%
CAGGAGGAATGGTAGTAATG+CGG + Chr5:23251967-23251986 MsG0580025726.01.T01:intron 45.0%
CATAATTATCGGGGTCCCAA+TGG - Chr5:23246689-23246708 None:intergenic 45.0%
CGTTTCCACAAACACCTTGT+GGG - Chr5:23250129-23250148 None:intergenic 45.0%
CTGAGAGGAATAAAAGGGAG+GGG - Chr5:23249600-23249619 None:intergenic 45.0%
CTTATGTAGTTATGGGACGG+AGG + Chr5:23253409-23253428 MsG0580025726.01.T01:CDS 45.0%
GAGAGAAGAAGAGAGAACAG+AGG - Chr5:23249453-23249472 None:intergenic 45.0%
GAGGGGTAAGGTTTAGGAAA+TGG + Chr5:23246993-23247012 MsG0580025726.01.T01:intron 45.0%
GCTGAGAGGAATAAAAGGGA+GGG - Chr5:23249601-23249620 None:intergenic 45.0%
GCTTTGCATCCTATACAGTG+GGG - Chr5:23250614-23250633 None:intergenic 45.0%
GGAAGGTTGAGAGAAAGCTA+GGG + Chr5:23249786-23249805 MsG0580025726.01.T01:intron 45.0%
GGCTTTGCATCCTATACAGT+GGG - Chr5:23250615-23250634 None:intergenic 45.0%
GGGGACTTGAAACAAACAAG+TGG + Chr5:23247015-23247034 MsG0580025726.01.T01:intron 45.0%
GGGGTAAGGTTTAGGAAATG+GGG + Chr5:23246995-23247014 MsG0580025726.01.T01:intron 45.0%
GGGTAAGGTTTAGGAAATGG+GGG + Chr5:23246996-23247015 MsG0580025726.01.T01:intron 45.0%
GGTATACTTCTCTTGAGCAC+CGG + Chr5:23246616-23246635 MsG0580025726.01.T01:CDS 45.0%
GTATACTTCTCTTGAGCACC+GGG + Chr5:23246617-23246636 MsG0580025726.01.T01:CDS 45.0%
GTATGTCTTGTGGTTGGATG+AGG - Chr5:23248693-23248712 None:intergenic 45.0%
GTTCGGCTGAGAGGAATAAA+AGG - Chr5:23249606-23249625 None:intergenic 45.0%
GTTTGGTTGCTTCAAGAGCT+TGG + Chr5:23249711-23249730 MsG0580025726.01.T01:intron 45.0%
TCAAGGTTCAGTGACTGAGT+TGG - Chr5:23252418-23252437 None:intergenic 45.0%
TCAGTCACTGAACCTTGAGA+AGG + Chr5:23252420-23252439 MsG0580025726.01.T01:CDS 45.0%
TCCCATAATGAAGTTGCAGG+AGG + Chr5:23251951-23251970 MsG0580025726.01.T01:intron 45.0%
TGAATTGAGGTGAAGGATGG+AGG - Chr5:23249483-23249502 None:intergenic 45.0%
TGAGAACCTGAATTGCGGTT+CGG - Chr5:23250295-23250314 None:intergenic 45.0%
TGAGGTTGTCACCACTTTCT+TGG - Chr5:23251606-23251625 None:intergenic 45.0%
TGCCTTGAGAACCTGAATTG+CGG - Chr5:23250300-23250319 None:intergenic 45.0%
TGGAAGGTTGAGAGAAAGCT+AGG + Chr5:23249785-23249804 MsG0580025726.01.T01:intron 45.0%
TGGTCCCATAATGAAGTTGC+AGG + Chr5:23251948-23251967 MsG0580025726.01.T01:intron 45.0%
TGTTTGTGGAAACGTGGCAA+AGG + Chr5:23250135-23250154 MsG0580025726.01.T01:intron 45.0%
TTCTCAAGAGGTGGCTATGT+TGG + Chr5:23246764-23246783 MsG0580025726.01.T01:intron 45.0%
TTGGGCAGCTATGAATGCAT+GGG + Chr5:23247038-23247057 MsG0580025726.01.T01:intron 45.0%
TTTGTCTCCCGACTAATGAG+TGG + Chr5:23251352-23251371 MsG0580025726.01.T01:intron 45.0%
! AACCGCAATTCAGGTTCTCA+AGG + Chr5:23250295-23250314 MsG0580025726.01.T01:CDS 45.0%
! AAGCCAATTTTGTGGTCGAG+AGG + Chr5:23246864-23246883 MsG0580025726.01.T01:intron 45.0%
! AATGCAATGGATCTGAAGCG+AGG + Chr5:23251461-23251480 MsG0580025726.01.T01:CDS 45.0%
! ACAAGGTGTTTGTGGAAACG+TGG + Chr5:23250129-23250148 MsG0580025726.01.T01:intron 45.0%
! AGAGAAGTATACCGATGGAC+CGG - Chr5:23246729-23246748 None:intergenic 45.0%
! AGGGCTGGTACAAAGGTTAT+GGG + Chr5:23249877-23249896 MsG0580025726.01.T01:intron 45.0%
! GAGAAGTATACCGATGGTGA+AGG - Chr5:23246608-23246627 None:intergenic 45.0%
! GCTCAAGAGAAGTATACCGA+TGG - Chr5:23246614-23246633 None:intergenic 45.0%
! TAGGGCTGGTACAAAGGTTA+TGG + Chr5:23249876-23249895 MsG0580025726.01.T01:intron 45.0%
! TAGTACCCACAAGGTGTTTG+TGG + Chr5:23250121-23250140 MsG0580025726.01.T01:intron 45.0%
! TATACTTCTCTTGAGCACCG+GGG + Chr5:23246618-23246637 MsG0580025726.01.T01:CDS 45.0%
!! GGGTACTGACTACTGACAAT+GGG + Chr5:23249732-23249751 MsG0580025726.01.T01:intron 45.0%
!! TGGGTACTGACTACTGACAA+TGG + Chr5:23249731-23249750 MsG0580025726.01.T01:intron 45.0%
!! AGTTATAAAAAAATAAAAAT+TGG - Chr5:23248927-23248946 None:intergenic 5.0%
!!! AACATAAAATAATTTTTTTA+TGG - Chr5:23247147-23247166 None:intergenic 5.0%
!!! ACATAAAATAATTTTTTTAT+GGG - Chr5:23247146-23247165 None:intergenic 5.0%
!!! ATAGAATAATTTTTTTTTAT+GGG - Chr5:23248732-23248751 None:intergenic 5.0%
!!! TTTTTTTTTCATTTATTAAA+TGG + Chr5:23248403-23248422 MsG0580025726.01.T01:intron 5.0%
CCATGGTACTTCTCAAGAGG+TGG + Chr5:23246755-23246774 MsG0580025726.01.T01:intron 50.0%
GAAGAAGAGAGAACAGAGGG+AGG - Chr5:23249449-23249468 None:intergenic 50.0%
GAATAGCCGAACCGCAATTC+AGG + Chr5:23250286-23250305 MsG0580025726.01.T01:CDS 50.0%
GAGGGGTAAGGTTTAGGAAG+TGG + Chr5:23247666-23247685 MsG0580025726.01.T01:intron 50.0%
GATGGTGAAGGCAGTCCTAA+TGG - Chr5:23246596-23246615 None:intergenic 50.0%
GCACCATGGTACTTCTCAAG+AGG + Chr5:23246752-23246771 MsG0580025726.01.T01:intron 50.0%
GGATGCAAATCAGTAGCAGC+TGG + Chr5:23251434-23251453 MsG0580025726.01.T01:CDS 50.0%
GGCTGAGAGGAATAAAAGGG+AGG - Chr5:23249602-23249621 None:intergenic 50.0%
GGGGTAAGGTTTAGGAAGTG+GGG + Chr5:23247668-23247687 MsG0580025726.01.T01:intron 50.0%
GGGTAAGGTTTAGGAAGTGG+GGG + Chr5:23247669-23247688 MsG0580025726.01.T01:intron 50.0%
GGTAACACAGTGAGCAAGCT+AGG - Chr5:23247844-23247863 None:intergenic 50.0%
GTTGGGCAGCTATGAATGCA+TGG + Chr5:23247037-23247056 MsG0580025726.01.T01:intron 50.0%
TGGGCAGCTATGAATGCATG+GGG + Chr5:23247039-23247058 MsG0580025726.01.T01:intron 50.0%
TGGTGAAGGCAGTCCTAATG+GGG - Chr5:23246594-23246613 None:intergenic 50.0%
TGTCTTGTGGTTGGATGAGG+AGG - Chr5:23248690-23248709 None:intergenic 50.0%
TTAAAGAGGGTTCGGCTGAG+AGG - Chr5:23249615-23249634 None:intergenic 50.0%
! GAGAAGTATACCGATGGACC+GGG - Chr5:23246728-23246747 None:intergenic 50.0%
! TGAGACTAGGGCTGGTACAA+AGG + Chr5:23249870-23249889 MsG0580025726.01.T01:intron 50.0%
!! AGTTGTTCTGAGACTAGGGC+TGG + Chr5:23249862-23249881 MsG0580025726.01.T01:intron 50.0%
!! CCACCTCTTGAGAAGTACCA+TGG - Chr5:23246758-23246777 None:intergenic 50.0%
CTACTGTCCTGCAGTCCTTG+AGG - Chr5:23251624-23251643 None:intergenic 55.0%
GTGACAACCTCAAGGACTGC+AGG + Chr5:23251614-23251633 MsG0580025726.01.T01:intron 55.0%
! AGGTGTTCGGCAGCTTGTTC+TGG - Chr5:23252572-23252591 None:intergenic 55.0%
! GGTGTTCGGCAGCTTGTTCT+GGG - Chr5:23252571-23252590 None:intergenic 55.0%
! GTAAAGATGACGGTCCACCC+CGG - Chr5:23246638-23246657 None:intergenic 55.0%
!! GGCTATGTTGGTTCAGCACC+TGG + Chr5:23246776-23246795 MsG0580025726.01.T01:intron 55.0%
ATGGACCGGGCAGCCTCAAT+GGG - Chr5:23246715-23246734 None:intergenic 60.0%
ATTGAGGCTGCCCGGTCCAT+CGG + Chr5:23246715-23246734 MsG0580025726.01.T01:CDS 60.0%
TGTTGCCCATTGAGGCTGCC+CGG + Chr5:23246707-23246726 MsG0580025726.01.T01:CDS 60.0%
!! ACTTCTCTTGAGCACCGGGG+TGG + Chr5:23246621-23246640 MsG0580025726.01.T01:CDS 60.0%
GATGGACCGGGCAGCCTCAA+TGG - Chr5:23246716-23246735 None:intergenic 65.0%
! TGATGGGCACGCCGGACTTC+AGG + Chr5:23250337-23250356 MsG0580025726.01.T01:CDS 65.0%
!! GCAGTCGATGATGGGCACGC+CGG + Chr5:23250329-23250348 MsG0580025726.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 23246586 23253440 23246586 ID=MsG0580025726.01;Name=MsG0580025726.01
Chr5 mRNA 23246586 23253440 23246586 ID=MsG0580025726.01.T01;Parent=MsG0580025726.01;Name=MsG0580025726.01.T01;_AED=0.50;_eAED=0.58;_QI=0|0.16|0|1|1|1|7|0|321
Chr5 exon 23246586 23246736 23246586 ID=MsG0580025726.01.T01:exon:4281;Parent=MsG0580025726.01.T01
Chr5 exon 23250240 23250358 23250240 ID=MsG0580025726.01.T01:exon:4282;Parent=MsG0580025726.01.T01
Chr5 exon 23250624 23250763 23250624 ID=MsG0580025726.01.T01:exon:4283;Parent=MsG0580025726.01.T01
Chr5 exon 23250869 23251011 23250869 ID=MsG0580025726.01.T01:exon:4284;Parent=MsG0580025726.01.T01
Chr5 exon 23251390 23251565 23251390 ID=MsG0580025726.01.T01:exon:4285;Parent=MsG0580025726.01.T01
Chr5 exon 23252397 23252486 23252397 ID=MsG0580025726.01.T01:exon:4286;Parent=MsG0580025726.01.T01
Chr5 exon 23253294 23253440 23253294 ID=MsG0580025726.01.T01:exon:4287;Parent=MsG0580025726.01.T01
Chr5 CDS 23246586 23246736 23246586 ID=MsG0580025726.01.T01:cds;Parent=MsG0580025726.01.T01
Chr5 CDS 23250240 23250358 23250240 ID=MsG0580025726.01.T01:cds;Parent=MsG0580025726.01.T01
Chr5 CDS 23250624 23250763 23250624 ID=MsG0580025726.01.T01:cds;Parent=MsG0580025726.01.T01
Chr5 CDS 23250869 23251011 23250869 ID=MsG0580025726.01.T01:cds;Parent=MsG0580025726.01.T01
Chr5 CDS 23251390 23251565 23251390 ID=MsG0580025726.01.T01:cds;Parent=MsG0580025726.01.T01
Chr5 CDS 23252397 23252486 23252397 ID=MsG0580025726.01.T01:cds;Parent=MsG0580025726.01.T01
Chr5 CDS 23253294 23253440 23253294 ID=MsG0580025726.01.T01:cds;Parent=MsG0580025726.01.T01
Gene Sequence

>MsG0580025726.01.T01

ATGTTCCCCATTAGGACTGCCTTCACCATCGGTATACTTCTCTTGAGCACCGGGGTGGACCGTCATCTTTACCTCACAATCAAATCAGTATTTATGTTGCCCATTGGGACCCCGATAATTATGTTGCCCATTGAGGCTGCCCGGTCCATCGAAAATTTAGAGAAAAAAACGATAAAATGGTGTAGGAGGATACTCAGGAATAGCCGAACCGCAATTCAGGTTCTCAAGGCAGCTATTAATGCAGTCGATGATGGGCACGCCGGACTTCAGGATGCAAAGCCTGTGTCTAAGCCTGTTGCTATTGAAAAAAGAGTAAGAAAGATAGCTCCGATTCTGACGATGAAGATTATGATAGAAGCTCTGAAGAAGAGAAGAAACTTGTGGCTGCTAAGAAAGAGGTTAGTGAATCGAGGAAAAGATGGTGAAGGAACTTCTGGAATTAACAGGGATGATGATGATGATGATGATGATGATGATGATAGCTATGAATATTTACAAGAGATGAATTTTGTGCCTTATGAAACACTTCTTCACAATAACATGAATACCAATGGAACCACTTGTGCTACAGTTCTTATCCGAGCAATATTTACGGAAGGATGCAAATCAGTAGCAGCTGGAATGAATGCAATGGATCTGAAGCGAGGTATAAATATGGATGTTGATGCTGTTGTGACAAACTTGAAAAGCAGAGCACGAATGATCAACACTTCTGAAGAAATAACTCAGAATATTGTCTTCGATGCTCCAACTCAGTCACTGAACCTTGAGAAGGTTGATACATTTGCTGAATCCTCGAAATCAGTTCCAATTCCTACGATGACAACAGCAATTGCTATAGAGGATGTAAGAAGAGAAGTGAAGATATTGAGAGCTCTAATCGGGCATAAGAATTTGGTACAATTCTACGAAGCCTATGAAGACGAAGAAAATGCTTATGTAGTTATGGGACGGAGGGAGTATTAA
Protein sequence

>MsG0580025726.01.T01

MFPIRTAFTIGILLLSTGVDRHLYLTIKSVFMLPIGTPIIMLPIEAARSIENLEKKTIKWCRRILRNSRTAIQVLKAAINAVDDGHAGLQDAKPVSKPVAIEKRVRKIAPILTMKIMIEALKKRRNLWLLRKRLVNRGKDGEGTSGINRDDDDDDDDDDDSYEYLQEMNFVPYETLLHNNMNTNGTTCATVLIRAIFTEGCKSVAAGMNAMDLKRGINMDVDAVVTNLKSRARMINTSEEITQNIVFDAPTQSLNLEKVDTFAESSKSVPIPTMTTAIAIEDVRREVKILRALIGHKNLVQFYEAYEDEENAYVVMGRREY*