Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029101.01.T01 | XP_039688731.1 | 64.402 | 368 | 102 | 5 | 1 | 360 | 1 | 347 | 1.08E-152 | 444 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029101.01.T01 | A0A6D2I977 | 60.112 | 356 | 108 | 6 | 1 | 343 | 1 | 335 | 1.61e-138 | 406 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0380012021.01 | MsG0580029101.01 | 0.831342 | 1.762293e-55 | 1.906967e-52 |
| MsG0380012033.01 | MsG0580029101.01 | 0.814130 | 1.802097e-51 | 1.199119e-48 |
| MsG0380014122.01 | MsG0580029101.01 | 0.981711 | 2.934211e-153 | 7.822578e-147 |
| MsG0480021775.01 | MsG0580029101.01 | 0.885985 | 5.068229e-72 | 3.553403e-68 |
| MsG0480022862.01 | MsG0580029101.01 | 0.962251 | 1.179472e-120 | 5.831544e-115 |
| MsG0480023011.01 | MsG0580029101.01 | 0.806981 | 6.317369e-50 | 3.477130e-47 |
| MsG0580024918.01 | MsG0580029101.01 | 0.937278 | 4.494939e-98 | 4.032440e-93 |
| MsG0380015877.01 | MsG0580029101.01 | 0.814668 | 1.370463e-51 | 9.252624e-49 |
| MsG0380017940.01 | MsG0580029101.01 | 0.805004 | 1.645536e-49 | 8.609174e-47 |
| MsG0580027617.01 | MsG0580029101.01 | 0.984804 | 1.224246e-161 | 4.598210e-155 |
| MsG0580029101.01 | MsG0780036201.01 | 0.807473 | 4.970048e-50 | 2.770812e-47 |
| MsG0580029101.01 | MsG0780038113.01 | 0.804272 | 2.338811e-49 | 1.200744e-46 |
| MsG0580029101.01 | MsG0780038597.01 | 0.953120 | 5.509668e-111 | 1.413977e-105 |
| MsG0580029101.01 | MsG0780039252.01 | 0.800719 | 1.263026e-48 | 5.922909e-46 |
| MsG0580029101.01 | MsG0780039544.01 | 0.804678 | 1.925415e-49 | 9.989102e-47 |
| MsG0580029101.01 | MsG0780040186.01 | 0.899735 | 1.476416e-77 | 1.849062e-73 |
| MsG0280006510.01 | MsG0580029101.01 | 0.863206 | 2.936372e-64 | 8.830985e-61 |
| MsG0280010102.01 | MsG0580029101.01 | 0.802141 | 6.459712e-49 | 3.140329e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029101.01.T01 | MTR_7g062720 | 65.909 | 132 | 45 | 0 | 1 | 132 | 1 | 132 | 9.98e-60 | 190 |
| MsG0580029101.01.T01 | MTR_5g061150 | 62.992 | 127 | 47 | 0 | 20 | 146 | 10 | 136 | 2.18e-48 | 160 |
| MsG0580029101.01.T01 | MTR_4g037355 | 57.971 | 138 | 35 | 5 | 151 | 287 | 1 | 116 | 2.52e-41 | 142 |
| MsG0580029101.01.T01 | MTR_4g112730 | 71.831 | 71 | 18 | 1 | 138 | 208 | 1 | 69 | 1.03e-26 | 102 |
| MsG0580029101.01.T01 | MTR_1g036690 | 58.537 | 82 | 27 | 3 | 280 | 360 | 5 | 80 | 1.06e-22 | 90.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 69 sgRNAs with CRISPR-Local
Find 86 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAGGCTCTTAATATTTC+TGG | 0.080746 | 5:-91971180 | MsG0580029101.01.T01:CDS |
| TTCGGCATTTAAATGAATTT+TGG | 0.166319 | 5:+91971128 | None:intergenic |
| CACTTCAAAATAAGGATAAA+AGG | 0.234592 | 5:-91970285 | MsG0580029101.01.T01:CDS |
| CCAACAATCACTTCAAAATA+AGG | 0.244294 | 5:-91970293 | MsG0580029101.01.T01:CDS |
| ATGGTTATATTTGCGTTTAC+AGG | 0.259438 | 5:-91970905 | MsG0580029101.01.T01:CDS |
| TATGGAAGGGGACGTGGTTT+TGG | 0.259444 | 5:-91970520 | MsG0580029101.01.T01:CDS |
| AAATTGTCCCAAAGATCTTT+TGG | 0.267031 | 5:+91970982 | None:intergenic |
| TATTTCTGGAAATAATTATC+TGG | 0.282933 | 5:-91971166 | MsG0580029101.01.T01:CDS |
| TAGAAGATCCAAAAGATCTT+TGG | 0.283634 | 5:-91970990 | MsG0580029101.01.T01:CDS |
| TGTGTTGCTACATTCACTTC+TGG | 0.294995 | 5:+91970616 | None:intergenic |
| TATAGGTGGGGTTCTATTCC+TGG | 0.331534 | 5:+91970131 | None:intergenic |
| TAAAGATCAACAAGATGTTT+TGG | 0.333763 | 5:+91970316 | None:intergenic |
| TGAAGATGATTATGGTAATA+TGG | 0.338642 | 5:-91970233 | MsG0580029101.01.T01:CDS |
| CTGGAAATAATTATCTGGCT+TGG | 0.347827 | 5:-91971161 | MsG0580029101.01.T01:CDS |
| TGGAAATAATTATCTGGCTT+GGG | 0.353242 | 5:-91971160 | MsG0580029101.01.T01:CDS |
| CGTGGACGTGGTCGTGGTTA+TGG | 0.362984 | 5:-91970538 | MsG0580029101.01.T01:CDS |
| AACCATTCATTACGAGCATT+AGG | 0.386252 | 5:+91970922 | None:intergenic |
| GAAAATGATGAAGATGATTA+TGG | 0.391347 | 5:-91970241 | MsG0580029101.01.T01:CDS |
| TTTGGGACAATTTAAAAGAA+AGG | 0.395342 | 5:-91970972 | MsG0580029101.01.T01:CDS |
| AGAAGATCCAAAAGATCTTT+GGG | 0.400056 | 5:-91970989 | MsG0580029101.01.T01:CDS |
| TGCTATCGTTGTGGAGGAAA+AGG | 0.414829 | 5:-91970364 | MsG0580029101.01.T01:CDS |
| GTGTTGCTACATTCACTTCT+GGG | 0.423307 | 5:+91970617 | None:intergenic |
| CGTGGTTATGGAAGGGGACG+TGG | 0.429618 | 5:-91970526 | MsG0580029101.01.T01:CDS |
| CCTTCGTCACCACCTTCATA+AGG | 0.433246 | 5:-91971037 | MsG0580029101.01.T01:CDS |
| ATTAACACTGTGTGGAGAAA+AGG | 0.440407 | 5:-91970830 | MsG0580029101.01.T01:CDS |
| CAAAATCGTGGTCGTGGCCG+TGG | 0.442209 | 5:-91970580 | MsG0580029101.01.T01:CDS |
| CGTGGTCGTGGCCGTGGTCA+TGG | 0.454221 | 5:-91970574 | MsG0580029101.01.T01:CDS |
| CAAAACAACTGAACAACAAA+AGG | 0.454927 | 5:-91971076 | MsG0580029101.01.T01:CDS |
| AATTGTATCTCCATGCCCTT+CGG | 0.460742 | 5:+91971110 | None:intergenic |
| AGAAATCAGCAGCATCTAAG+TGG | 0.464577 | 5:+91970203 | None:intergenic |
| TTTCACGGTATTGTTGCTGC+AGG | 0.465441 | 5:+91970749 | None:intergenic |
| AATGTTGTAAAGAATGATAT+TGG | 0.471241 | 5:-91970415 | MsG0580029101.01.T01:CDS |
| GCAGCAACAATACCGTGAAA+AGG | 0.474876 | 5:-91970746 | MsG0580029101.01.T01:CDS |
| AATCACTCGGCTCGTCCCAC+TGG | 0.475930 | 5:-91970652 | MsG0580029101.01.T01:CDS |
| GCTACATTCACTTCTGGGAA+TGG | 0.483138 | 5:+91970622 | None:intergenic |
| ACTTCAAAATAAGGATAAAA+GGG | 0.487291 | 5:-91970284 | MsG0580029101.01.T01:CDS |
| CATTTAAATGCCGAAGGGCA+TGG | 0.494088 | 5:-91971120 | MsG0580029101.01.T01:CDS |
| CAGCAACAATACCGTGAAAA+GGG | 0.498612 | 5:-91970745 | MsG0580029101.01.T01:CDS |
| GACGTGGTCGTGGTTATGGA+AGG | 0.501950 | 5:-91970534 | MsG0580029101.01.T01:CDS |
| GTAGCAACACATGATCACTA+TGG | 0.504040 | 5:-91970604 | MsG0580029101.01.T01:CDS |
| GTTGTGGAGGAAAAGGTCAT+TGG | 0.504176 | 5:-91970357 | MsG0580029101.01.T01:CDS |
| CGTGGCCGTGGTCATGGTCG+TGG | 0.506333 | 5:-91970568 | MsG0580029101.01.T01:CDS |
| TTCCTAATGCTCGTAATGAA+TGG | 0.506622 | 5:-91970924 | MsG0580029101.01.T01:CDS |
| TACATTAGATGCATGAAAAG+TGG | 0.516304 | 5:+91970774 | None:intergenic |
| CATGGTCGTGGACGTGGACG+TGG | 0.524744 | 5:-91970556 | MsG0580029101.01.T01:CDS |
| CGTGGACGTGGACGTGGTCG+TGG | 0.524981 | 5:-91970544 | MsG0580029101.01.T01:CDS |
| CATTAGAGATGAAAATATCC+AGG | 0.532865 | 5:-91970149 | MsG0580029101.01.T01:CDS |
| CATGGAGATACAATTAAAGA+AGG | 0.533844 | 5:-91971102 | MsG0580029101.01.T01:CDS |
| AAAATTCATTTAAATGCCGA+AGG | 0.537172 | 5:-91971126 | MsG0580029101.01.T01:CDS |
| CGTGGTCATGGTCGTGGACG+TGG | 0.540833 | 5:-91970562 | MsG0580029101.01.T01:CDS |
| CGTGGACGTGGACGTGGACG+TGG | 0.546682 | 5:-91970550 | MsG0580029101.01.T01:CDS |
| CGTGGTCGTGGTTATGGAAG+GGG | 0.551769 | 5:-91970532 | MsG0580029101.01.T01:CDS |
| CTTAATATCATGCCTGCTTG+TGG | 0.567363 | 5:-91970704 | MsG0580029101.01.T01:CDS |
| TATGGACAAAATCGTGGTCG+TGG | 0.573891 | 5:-91970586 | MsG0580029101.01.T01:CDS |
| GTCTGTAATCGAATATAACT+CGG | 0.574961 | 5:-91970875 | MsG0580029101.01.T01:CDS |
| AACTGAACAACAAAAGGCTA+AGG | 0.582581 | 5:-91971070 | MsG0580029101.01.T01:CDS |
| GAGAGTATTTGCTATCGTTG+TGG | 0.583351 | 5:-91970373 | MsG0580029101.01.T01:CDS |
| ATTCATTACGAGCATTAGGA+AGG | 0.589984 | 5:+91970926 | None:intergenic |
| CCTTATGAAGGTGGTGACGA+AGG | 0.598722 | 5:+91971037 | None:intergenic |
| ACGTGGTCGTGGTTATGGAA+GGG | 0.598966 | 5:-91970533 | MsG0580029101.01.T01:CDS |
| AGTATTTGCTATCGTTGTGG+AGG | 0.599695 | 5:-91970370 | MsG0580029101.01.T01:CDS |
| GAAATCAGCAGCATCTAAGT+GGG | 0.621669 | 5:+91970204 | None:intergenic |
| AAATTCATTTAAATGCCGAA+GGG | 0.631745 | 5:-91971125 | MsG0580029101.01.T01:CDS |
| CACGTCCACGACCATGACCA+CGG | 0.661673 | 5:+91970563 | None:intergenic |
| GTGGTGACGAAGGAATATCA+TGG | 0.663314 | 5:+91971047 | None:intergenic |
| ACTTCTCTATTAACACTGTG+TGG | 0.668278 | 5:-91970838 | MsG0580029101.01.T01:CDS |
| TGGGAATGGAGCACTACCAG+TGG | 0.672955 | 5:+91970636 | None:intergenic |
| GGGAATGGAGCACTACCAGT+GGG | 0.676344 | 5:+91970637 | None:intergenic |
| GATCACTATGGACAAAATCG+TGG | 0.728183 | 5:-91970592 | MsG0580029101.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGTTGTAAAGAATGATAT+TGG | - | Chr5:91970933-91970952 | MsG0580029101.01.T01:CDS | 20.0% |
| !! | ACTTCAAAATAAGGATAAAA+GGG | - | Chr5:91971064-91971083 | MsG0580029101.01.T01:CDS | 20.0% |
| !!! | TATTTCTGGAAATAATTATC+TGG | - | Chr5:91970182-91970201 | MsG0580029101.01.T01:CDS | 20.0% |
| ! | AAAATTCATTTAAATGCCGA+AGG | - | Chr5:91970222-91970241 | MsG0580029101.01.T01:CDS | 25.0% |
| ! | AAATTCATTTAAATGCCGAA+GGG | - | Chr5:91970223-91970242 | MsG0580029101.01.T01:CDS | 25.0% |
| ! | CACTTCAAAATAAGGATAAA+AGG | - | Chr5:91971063-91971082 | MsG0580029101.01.T01:CDS | 25.0% |
| ! | GAAAATGATGAAGATGATTA+TGG | - | Chr5:91971107-91971126 | MsG0580029101.01.T01:CDS | 25.0% |
| ! | TGAAGATGATTATGGTAATA+TGG | - | Chr5:91971115-91971134 | MsG0580029101.01.T01:CDS | 25.0% |
| !! | TAAAGATCAACAAGATGTTT+TGG | + | Chr5:91971035-91971054 | None:intergenic | 25.0% |
| !! | TATTTTCATCTCTAATGAGA+TGG | + | Chr5:91971196-91971215 | None:intergenic | 25.0% |
| !! | TTACAACATTTTTCATCTTC+TGG | + | Chr5:91970923-91970942 | None:intergenic | 25.0% |
| !! | TTCGGCATTTAAATGAATTT+TGG | + | Chr5:91970223-91970242 | None:intergenic | 25.0% |
| !! | TTTGGGACAATTTAAAAGAA+AGG | - | Chr5:91970376-91970395 | MsG0580029101.01.T01:CDS | 25.0% |
| !!! | CATTTTTTAGATCCTTATGA+AGG | + | Chr5:91970326-91970345 | None:intergenic | 25.0% |
| !!! | GAGAAAATGTGTTTTTGTTT+TGG | + | Chr5:91970899-91970918 | None:intergenic | 25.0% |
| AGAAGATCCAAAAGATCTTT+GGG | - | Chr5:91970359-91970378 | MsG0580029101.01.T01:CDS | 30.0% | |
| ATGGTTATATTTGCGTTTAC+AGG | - | Chr5:91970443-91970462 | MsG0580029101.01.T01:CDS | 30.0% | |
| CAAAACAACTGAACAACAAA+AGG | - | Chr5:91970272-91970291 | MsG0580029101.01.T01:CDS | 30.0% | |
| CATGGAGATACAATTAAAGA+AGG | - | Chr5:91970246-91970265 | MsG0580029101.01.T01:CDS | 30.0% | |
| CATTAGAGATGAAAATATCC+AGG | - | Chr5:91971199-91971218 | MsG0580029101.01.T01:CDS | 30.0% | |
| CCAACAATCACTTCAAAATA+AGG | - | Chr5:91971055-91971074 | MsG0580029101.01.T01:CDS | 30.0% | |
| GTCTGTAATCGAATATAACT+CGG | - | Chr5:91970473-91970492 | MsG0580029101.01.T01:CDS | 30.0% | |
| TACATTAGATGCATGAAAAG+TGG | + | Chr5:91970577-91970596 | None:intergenic | 30.0% | |
| TAGAAGATCCAAAAGATCTT+TGG | - | Chr5:91970358-91970377 | MsG0580029101.01.T01:CDS | 30.0% | |
| ! | AAATTGTCCCAAAGATCTTT+TGG | + | Chr5:91970369-91970388 | None:intergenic | 30.0% |
| ! | AAGATCTTTTGGATCTTCTA+TGG | + | Chr5:91970358-91970377 | None:intergenic | 30.0% |
| ! | GCTTTTGATGAAAAATCACT+CGG | - | Chr5:91970683-91970702 | MsG0580029101.01.T01:CDS | 30.0% |
| ! | TGGAAATAATTATCTGGCTT+GGG | - | Chr5:91970188-91970207 | MsG0580029101.01.T01:CDS | 30.0% |
| ! | TTTGAGGCTCTTAATATTTC+TGG | - | Chr5:91970168-91970187 | MsG0580029101.01.T01:CDS | 30.0% |
| ! | TTTTTAGATCCTTATGAAGG+TGG | + | Chr5:91970323-91970342 | None:intergenic | 30.0% |
| !! | GGTTTTAATCGTAATCACAA+TGG | - | Chr5:91970849-91970868 | MsG0580029101.01.T01:CDS | 30.0% |
| !!! | ACCTTTTAAAACCCTTTTCA+CGG | + | Chr5:91970617-91970636 | None:intergenic | 30.0% |
| !!! | CCTTATTTTGAAGTGATTGT+TGG | + | Chr5:91971058-91971077 | None:intergenic | 30.0% |
| AACCATTCATTACGAGCATT+AGG | + | Chr5:91970429-91970448 | None:intergenic | 35.0% | |
| AACTGAACAACAAAAGGCTA+AGG | - | Chr5:91970278-91970297 | MsG0580029101.01.T01:CDS | 35.0% | |
| ACTTCTCTATTAACACTGTG+TGG | - | Chr5:91970510-91970529 | MsG0580029101.01.T01:CDS | 35.0% | |
| ATTAACACTGTGTGGAGAAA+AGG | - | Chr5:91970518-91970537 | MsG0580029101.01.T01:CDS | 35.0% | |
| ATTCATTACGAGCATTAGGA+AGG | + | Chr5:91970425-91970444 | None:intergenic | 35.0% | |
| CTGGAAATAATTATCTGGCT+TGG | - | Chr5:91970187-91970206 | MsG0580029101.01.T01:CDS | 35.0% | |
| TTCCTAATGCTCGTAATGAA+TGG | - | Chr5:91970424-91970443 | MsG0580029101.01.T01:CDS | 35.0% | |
| ! | AGATGGTCAATCTTTTCATC+AGG | + | Chr5:91971179-91971198 | None:intergenic | 35.0% |
| ! | CCTCAAAATCAAGTTTTGCA+AGG | + | Chr5:91970155-91970174 | None:intergenic | 35.0% |
| ! | CCTTGCAAAACTTGATTTTG+AGG | - | Chr5:91970152-91970171 | MsG0580029101.01.T01:CDS | 35.0% |
| ! | CTTTTGGATCTTCTATGGTA+AGG | + | Chr5:91970353-91970372 | None:intergenic | 35.0% |
| !!! | ACCGTGAAAAGGGTTTTAAA+AGG | - | Chr5:91970613-91970632 | MsG0580029101.01.T01:CDS | 35.0% |
| AATTGTATCTCCATGCCCTT+CGG | + | Chr5:91970241-91970260 | None:intergenic | 40.0% | |
| AGAAATCAGCAGCATCTAAG+TGG | + | Chr5:91971148-91971167 | None:intergenic | 40.0% | |
| CAGCAACAATACCGTGAAAA+GGG | - | Chr5:91970603-91970622 | MsG0580029101.01.T01:CDS | 40.0% | |
| CTTAATATCATGCCTGCTTG+TGG | - | Chr5:91970644-91970663 | MsG0580029101.01.T01:CDS | 40.0% | |
| GAAATCAGCAGCATCTAAGT+GGG | + | Chr5:91971147-91971166 | None:intergenic | 40.0% | |
| GATCACTATGGACAAAATCG+TGG | - | Chr5:91970756-91970775 | MsG0580029101.01.T01:CDS | 40.0% | |
| GTAGCAACACATGATCACTA+TGG | - | Chr5:91970744-91970763 | MsG0580029101.01.T01:CDS | 40.0% | |
| ! | GAAGGATGACAGTTTTCTGA+TGG | + | Chr5:91970407-91970426 | None:intergenic | 40.0% |
| ! | GTGTTGCTACATTCACTTCT+GGG | + | Chr5:91970734-91970753 | None:intergenic | 40.0% |
| ! | TATTTTGTTCTGCCACAAGC+AGG | + | Chr5:91970659-91970678 | None:intergenic | 40.0% |
| ! | TGTGTTGCTACATTCACTTC+TGG | + | Chr5:91970735-91970754 | None:intergenic | 40.0% |
| !! | AGTATTTGCTATCGTTGTGG+AGG | - | Chr5:91970978-91970997 | MsG0580029101.01.T01:CDS | 40.0% |
| !! | GAGAGTATTTGCTATCGTTG+TGG | - | Chr5:91970975-91970994 | MsG0580029101.01.T01:CDS | 40.0% |
| CATTTAAATGCCGAAGGGCA+TGG | - | Chr5:91970228-91970247 | MsG0580029101.01.T01:CDS | 45.0% | |
| GCAGCAACAATACCGTGAAA+AGG | - | Chr5:91970602-91970621 | MsG0580029101.01.T01:CDS | 45.0% | |
| GTTGTGGAGGAAAAGGTCAT+TGG | - | Chr5:91970991-91971010 | MsG0580029101.01.T01:CDS | 45.0% | |
| TATGGACAAAATCGTGGTCG+TGG | - | Chr5:91970762-91970781 | MsG0580029101.01.T01:CDS | 45.0% | |
| TGCTATCGTTGTGGAGGAAA+AGG | - | Chr5:91970984-91971003 | MsG0580029101.01.T01:CDS | 45.0% | |
| TTTCACGGTATTGTTGCTGC+AGG | + | Chr5:91970602-91970621 | None:intergenic | 45.0% | |
| ! | GCTACATTCACTTCTGGGAA+TGG | + | Chr5:91970729-91970748 | None:intergenic | 45.0% |
| ! | GTGGTGACGAAGGAATATCA+TGG | + | Chr5:91970304-91970323 | None:intergenic | 45.0% |
| !!! | AAGATGTTTTGGCGTACGAC+AGG | + | Chr5:91971024-91971043 | None:intergenic | 45.0% |
| ACGTGGTCGTGGTTATGGAA+GGG | - | Chr5:91970815-91970834 | MsG0580029101.01.T01:CDS | 50.0% | |
| CCTTCGTCACCACCTTCATA+AGG | - | Chr5:91970311-91970330 | MsG0580029101.01.T01:CDS | 50.0% | |
| ! | CCTTATGAAGGTGGTGACGA+AGG | + | Chr5:91970314-91970333 | None:intergenic | 50.0% |
| ! | TATGGAAGGGGACGTGGTTT+TGG | - | Chr5:91970828-91970847 | MsG0580029101.01.T01:CDS | 50.0% |
| CGTGGTCGTGGTTATGGAAG+GGG | - | Chr5:91970816-91970835 | MsG0580029101.01.T01:CDS | 55.0% | |
| GACGTGGTCGTGGTTATGGA+AGG | - | Chr5:91970814-91970833 | MsG0580029101.01.T01:CDS | 55.0% | |
| ! | GGGAATGGAGCACTACCAGT+GGG | + | Chr5:91970714-91970733 | None:intergenic | 55.0% |
| ! | TGGGAATGGAGCACTACCAG+TGG | + | Chr5:91970715-91970734 | None:intergenic | 55.0% |
| CAAAATCGTGGTCGTGGCCG+TGG | - | Chr5:91970768-91970787 | MsG0580029101.01.T01:CDS | 60.0% | |
| CACGTCCACGACCATGACCA+CGG | + | Chr5:91970788-91970807 | None:intergenic | 60.0% | |
| CGTGGACGTGGTCGTGGTTA+TGG | - | Chr5:91970810-91970829 | MsG0580029101.01.T01:CDS | 60.0% | |
| CGTGGTTATGGAAGGGGACG+TGG | - | Chr5:91970822-91970841 | MsG0580029101.01.T01:CDS | 60.0% | |
| ! | AATCACTCGGCTCGTCCCAC+TGG | - | Chr5:91970696-91970715 | MsG0580029101.01.T01:CDS | 60.0% |
| CATGGTCGTGGACGTGGACG+TGG | - | Chr5:91970792-91970811 | MsG0580029101.01.T01:CDS | 65.0% | |
| CGTGGTCATGGTCGTGGACG+TGG | - | Chr5:91970786-91970805 | MsG0580029101.01.T01:CDS | 65.0% | |
| CGTGGACGTGGACGTGGACG+TGG | - | Chr5:91970798-91970817 | MsG0580029101.01.T01:CDS | 70.0% | |
| CGTGGACGTGGACGTGGTCG+TGG | - | Chr5:91970804-91970823 | MsG0580029101.01.T01:CDS | 70.0% | |
| CGTGGCCGTGGTCATGGTCG+TGG | - | Chr5:91970780-91970799 | MsG0580029101.01.T01:CDS | 70.0% | |
| CGTGGTCGTGGCCGTGGTCA+TGG | - | Chr5:91970774-91970793 | MsG0580029101.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 91970144 | 91971226 | 91970144 | ID=MsG0580029101.01;Name=MsG0580029101.01 |
| Chr5 | mRNA | 91970144 | 91971226 | 91970144 | ID=MsG0580029101.01.T01;Parent=MsG0580029101.01;Name=MsG0580029101.01.T01;_AED=0.24;_eAED=0.24;_QI=0|-1|0|1|-1|1|1|0|360 |
| Chr5 | exon | 91970144 | 91971226 | 91970144 | ID=MsG0580029101.01.T01:exon:7459;Parent=MsG0580029101.01.T01 |
| Chr5 | CDS | 91970144 | 91971226 | 91970144 | ID=MsG0580029101.01.T01:cds;Parent=MsG0580029101.01.T01 |
| Gene Sequence |
| Protein sequence |
