Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014122.01.T01 | XP_028800998.1 | 65.574 | 366 | 102 | 4 | 1 | 360 | 1 | 348 | 1.34E-153 | 446 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014122.01.T01 | A0A1U8KII2 | 61.254 | 351 | 116 | 4 | 1 | 346 | 1 | 336 | 1.09e-137 | 404 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0380012021.01 | MsG0380014122.01 | 0.818952 | 1.498201e-52 | 1.137624e-49 |
| MsG0380012033.01 | MsG0380014122.01 | 0.818650 | 1.754818e-52 | 1.321181e-49 |
| MsG0380014122.01 | MsG0380015877.01 | 0.812477 | 4.156146e-51 | 2.645425e-48 |
| MsG0380014122.01 | MsG0480021775.01 | 0.898988 | 3.089632e-77 | 3.743125e-73 |
| MsG0380014122.01 | MsG0480022862.01 | 0.939934 | 5.499418e-100 | 5.829807e-95 |
| MsG0380014122.01 | MsG0480023011.01 | 0.814550 | 1.455452e-51 | 9.795637e-49 |
| MsG0380014122.01 | MsG0580024918.01 | 0.940998 | 8.920058e-101 | 1.012709e-95 |
| MsG0380014122.01 | MsG0580027617.01 | 0.966872 | 1.667849e-126 | 1.187277e-120 |
| MsG0380014122.01 | MsG0580029101.01 | 0.981711 | 2.934211e-153 | 7.822578e-147 |
| MsG0380014122.01 | MsG0780036201.01 | 0.818579 | 1.821389e-52 | 1.368647e-49 |
| MsG0380014122.01 | MsG0780038113.01 | 0.801063 | 1.074365e-48 | 5.082729e-46 |
| MsG0380014122.01 | MsG0780038597.01 | 0.940195 | 3.529193e-100 | 3.801081e-95 |
| MsG0380014122.01 | MsG0780039252.01 | 0.808923 | 2.439484e-50 | 1.412662e-47 |
| MsG0380014122.01 | MsG0780039503.01 | 0.818855 | 1.576281e-52 | 1.193650e-49 |
| MsG0380014122.01 | MsG0780039544.01 | 0.822413 | 2.400634e-53 | 2.008024e-50 |
| MsG0380014122.01 | MsG0780039592.01 | 0.817088 | 3.952125e-52 | 2.850698e-49 |
| MsG0380014122.01 | MsG0780040186.01 | 0.912359 | 2.131814e-83 | 4.777851e-79 |
| MsG0280006510.01 | MsG0380014122.01 | 0.866210 | 3.368000e-65 | 1.125970e-61 |
| MsG0280008073.01 | MsG0380014122.01 | 0.800325 | 1.519660e-48 | 7.055972e-46 |
| MsG0280010102.01 | MsG0380014122.01 | 0.815136 | 1.078824e-51 | 7.376221e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380014122.01.T01 | MTR_7g062720 | 65.909 | 132 | 45 | 0 | 1 | 132 | 1 | 132 | 9.06e-60 | 190 |
| MsG0380014122.01.T01 | MTR_5g061150 | 62.992 | 127 | 47 | 0 | 20 | 146 | 10 | 136 | 2.58e-48 | 160 |
| MsG0380014122.01.T01 | MTR_4g037355 | 57.246 | 138 | 36 | 4 | 151 | 287 | 1 | 116 | 2.80e-41 | 142 |
| MsG0380014122.01.T01 | MTR_4g112730 | 69.863 | 73 | 20 | 1 | 138 | 210 | 1 | 71 | 1.80e-25 | 99.0 |
| MsG0380014122.01.T01 | MTR_1g036690 | 58.537 | 82 | 27 | 3 | 280 | 360 | 5 | 80 | 1.05e-22 | 90.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 69 sgRNAs with CRISPR-Local
Find 86 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAGGCTCTTAATATTTC+TGG | 0.080746 | 3:-50142558 | MsG0380014122.01.T01:CDS |
| TTCGGCATTTAAATGAATTT+TGG | 0.166319 | 3:+50142506 | None:intergenic |
| CACTTCAAAATAAGGATAAA+AGG | 0.234592 | 3:-50141663 | MsG0380014122.01.T01:CDS |
| CCAACAATCACTTCAAAATA+AGG | 0.244294 | 3:-50141671 | MsG0380014122.01.T01:CDS |
| TGTGGAAGGGGACGTGGTTT+TGG | 0.247927 | 3:-50141898 | MsG0380014122.01.T01:CDS |
| ATGGTTATATTTGCGTTTAC+AGG | 0.259438 | 3:-50142283 | MsG0380014122.01.T01:CDS |
| AAATTGTCCCAAAGATCTTT+TGG | 0.267031 | 3:+50142360 | None:intergenic |
| TATTTCTGGAAATAATTATC+TGG | 0.282933 | 3:-50142544 | MsG0380014122.01.T01:CDS |
| TAGAAGATCCAAAAGATCTT+TGG | 0.283634 | 3:-50142368 | MsG0380014122.01.T01:CDS |
| TGTGTTGCTACATTCACTTC+TGG | 0.294995 | 3:+50141994 | None:intergenic |
| TATAGGTGGGGTTCTATTCC+TGG | 0.331534 | 3:+50141509 | None:intergenic |
| TAAAGATCAACAAGATGTTT+TGG | 0.333763 | 3:+50141694 | None:intergenic |
| TGAAGATGATTATGGTAATA+TGG | 0.338642 | 3:-50141611 | MsG0380014122.01.T01:CDS |
| CTGGAAATAATTATCTGGCT+TGG | 0.347827 | 3:-50142539 | MsG0380014122.01.T01:CDS |
| TGGAAATAATTATCTGGCTT+GGG | 0.353242 | 3:-50142538 | MsG0380014122.01.T01:CDS |
| AACCATTCATTACGAGCATT+AGG | 0.386252 | 3:+50142300 | None:intergenic |
| GAAAATGATGAAGATGATTA+TGG | 0.391347 | 3:-50141619 | MsG0380014122.01.T01:CDS |
| TTTGGGACAATTTAAAAGAA+AGG | 0.395342 | 3:-50142350 | MsG0380014122.01.T01:CDS |
| AGAAGATCCAAAAGATCTTT+GGG | 0.400056 | 3:-50142367 | MsG0380014122.01.T01:CDS |
| TGCTATCGTTGTGGAGGAAA+AGG | 0.414829 | 3:-50141742 | MsG0380014122.01.T01:CDS |
| CGTGGTCGTGGTTGTGGAAG+GGG | 0.421350 | 3:-50141910 | MsG0380014122.01.T01:CDS |
| GTGTTGCTACATTCACTTCT+GGG | 0.423307 | 3:+50141995 | None:intergenic |
| CGTGGTTGTGGAAGGGGACG+TGG | 0.427760 | 3:-50141904 | MsG0380014122.01.T01:CDS |
| CCTTCGTCACCACCTTCATA+AGG | 0.433246 | 3:-50142415 | MsG0380014122.01.T01:CDS |
| CGTGGACGTGGTCGTGGTTG+TGG | 0.436225 | 3:-50141916 | MsG0380014122.01.T01:CDS |
| ATTAACACTGTGTGGAGAAA+AGG | 0.440407 | 3:-50142208 | MsG0380014122.01.T01:CDS |
| CAAAATCGTGGTCGTGGCCG+TGG | 0.442209 | 3:-50141958 | MsG0380014122.01.T01:CDS |
| CGTGGTCGTGGCCGTGGTCA+TGG | 0.454221 | 3:-50141952 | MsG0380014122.01.T01:CDS |
| CAAAACAACTGAACAACAAA+AGG | 0.454927 | 3:-50142454 | MsG0380014122.01.T01:CDS |
| AATTGTATCTCCATGCCCTT+CGG | 0.460742 | 3:+50142488 | None:intergenic |
| AGAAATCAGCAGCATCTAAG+TGG | 0.464577 | 3:+50141581 | None:intergenic |
| TTTCACGGTATTGTTGCTGC+AGG | 0.465441 | 3:+50142127 | None:intergenic |
| AATGTTGTAAAGAATGATAT+TGG | 0.471241 | 3:-50141793 | MsG0380014122.01.T01:CDS |
| GCAGCAACAATACCGTGAAA+AGG | 0.474876 | 3:-50142124 | MsG0380014122.01.T01:CDS |
| AATCACTCGGCTCGTCCCAC+TGG | 0.475930 | 3:-50142030 | MsG0380014122.01.T01:CDS |
| GACGTGGTCGTGGTTGTGGA+AGG | 0.480300 | 3:-50141912 | MsG0380014122.01.T01:CDS |
| GCTACATTCACTTCTGGGAA+TGG | 0.483138 | 3:+50142000 | None:intergenic |
| ACGTGGTCGTGGTTGTGGAA+GGG | 0.484449 | 3:-50141911 | MsG0380014122.01.T01:CDS |
| ACTTCAAAATAAGGATAAAA+GGG | 0.487291 | 3:-50141662 | MsG0380014122.01.T01:CDS |
| CATTTAAATGCCGAAGGGCA+TGG | 0.494088 | 3:-50142498 | MsG0380014122.01.T01:CDS |
| CAGCAACAATACCGTGAAAA+GGG | 0.498612 | 3:-50142123 | MsG0380014122.01.T01:CDS |
| GTAGCAACACATGATCACTA+TGG | 0.504040 | 3:-50141982 | MsG0380014122.01.T01:CDS |
| GTTGTGGAGGAAAAGGTCAT+TGG | 0.504176 | 3:-50141735 | MsG0380014122.01.T01:CDS |
| CGTGGCCGTGGTCATGGTCG+TGG | 0.506333 | 3:-50141946 | MsG0380014122.01.T01:CDS |
| TTCCTAATGCTCGTAATGAA+TGG | 0.506622 | 3:-50142302 | MsG0380014122.01.T01:CDS |
| TACATTAGATGCATGAAAAG+TGG | 0.516304 | 3:+50142152 | None:intergenic |
| CGTGGACGTGGACGTGGTCG+TGG | 0.520243 | 3:-50141922 | MsG0380014122.01.T01:CDS |
| CATGGTCGTGGACGTGGACG+TGG | 0.524744 | 3:-50141934 | MsG0380014122.01.T01:CDS |
| CATTAGAGATGAAAATATCC+AGG | 0.532865 | 3:-50141527 | MsG0380014122.01.T01:CDS |
| CATGGAGATACAATTAAAGA+AGG | 0.533844 | 3:-50142480 | MsG0380014122.01.T01:CDS |
| AAAATTCATTTAAATGCCGA+AGG | 0.537172 | 3:-50142504 | MsG0380014122.01.T01:CDS |
| CGTGGTCATGGTCGTGGACG+TGG | 0.540833 | 3:-50141940 | MsG0380014122.01.T01:CDS |
| CGTGGACGTGGACGTGGACG+TGG | 0.546682 | 3:-50141928 | MsG0380014122.01.T01:CDS |
| CTTAATATCATGCCTGCTTG+TGG | 0.567363 | 3:-50142082 | MsG0380014122.01.T01:CDS |
| TATGGACAAAATCGTGGTCG+TGG | 0.573891 | 3:-50141964 | MsG0380014122.01.T01:CDS |
| GTCTGTAATCGAATATAACT+CGG | 0.574961 | 3:-50142253 | MsG0380014122.01.T01:CDS |
| AACTGAACAACAAAAGGCTA+AGG | 0.582581 | 3:-50142448 | MsG0380014122.01.T01:CDS |
| GAGAGTATTTGCTATCGTTG+TGG | 0.583351 | 3:-50141751 | MsG0380014122.01.T01:CDS |
| ATTCATTACGAGCATTAGGA+AGG | 0.589984 | 3:+50142304 | None:intergenic |
| CCTTATGAAGGTGGTGACGA+AGG | 0.598722 | 3:+50142415 | None:intergenic |
| AGTATTTGCTATCGTTGTGG+AGG | 0.599695 | 3:-50141748 | MsG0380014122.01.T01:CDS |
| GAAATCAGCAGCATCTAAGT+GGG | 0.621669 | 3:+50141582 | None:intergenic |
| AAATTCATTTAAATGCCGAA+GGG | 0.631745 | 3:-50142503 | MsG0380014122.01.T01:CDS |
| CACGTCCACGACCATGACCA+CGG | 0.661673 | 3:+50141941 | None:intergenic |
| GTGGTGACGAAGGAATATCA+TGG | 0.663314 | 3:+50142425 | None:intergenic |
| ACTTCTCTATTAACACTGTG+TGG | 0.668278 | 3:-50142216 | MsG0380014122.01.T01:CDS |
| TGGGAATGGAGCACTACCAG+TGG | 0.672955 | 3:+50142014 | None:intergenic |
| GGGAATGGAGCACTACCAGT+GGG | 0.676344 | 3:+50142015 | None:intergenic |
| GATCACTATGGACAAAATCG+TGG | 0.728183 | 3:-50141970 | MsG0380014122.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGTTGTAAAGAATGATAT+TGG | - | Chr3:50142311-50142330 | MsG0380014122.01.T01:CDS | 20.0% |
| !! | ACTTCAAAATAAGGATAAAA+GGG | - | Chr3:50142442-50142461 | MsG0380014122.01.T01:CDS | 20.0% |
| !!! | TATTTCTGGAAATAATTATC+TGG | - | Chr3:50141560-50141579 | MsG0380014122.01.T01:CDS | 20.0% |
| ! | AAAATTCATTTAAATGCCGA+AGG | - | Chr3:50141600-50141619 | MsG0380014122.01.T01:CDS | 25.0% |
| ! | AAATTCATTTAAATGCCGAA+GGG | - | Chr3:50141601-50141620 | MsG0380014122.01.T01:CDS | 25.0% |
| ! | CACTTCAAAATAAGGATAAA+AGG | - | Chr3:50142441-50142460 | MsG0380014122.01.T01:CDS | 25.0% |
| ! | GAAAATGATGAAGATGATTA+TGG | - | Chr3:50142485-50142504 | MsG0380014122.01.T01:CDS | 25.0% |
| ! | TGAAGATGATTATGGTAATA+TGG | - | Chr3:50142493-50142512 | MsG0380014122.01.T01:CDS | 25.0% |
| !! | TAAAGATCAACAAGATGTTT+TGG | + | Chr3:50142413-50142432 | None:intergenic | 25.0% |
| !! | TATTTTCATCTCTAATGAGA+TGG | + | Chr3:50142574-50142593 | None:intergenic | 25.0% |
| !! | TTACAACATTTTTCATCTTC+TGG | + | Chr3:50142301-50142320 | None:intergenic | 25.0% |
| !! | TTCGGCATTTAAATGAATTT+TGG | + | Chr3:50141601-50141620 | None:intergenic | 25.0% |
| !! | TTTGGGACAATTTAAAAGAA+AGG | - | Chr3:50141754-50141773 | MsG0380014122.01.T01:CDS | 25.0% |
| !!! | CATTTTTTAGATCCTTATGA+AGG | + | Chr3:50141704-50141723 | None:intergenic | 25.0% |
| !!! | GAGAAAATGTGTTTTTGTTT+TGG | + | Chr3:50142277-50142296 | None:intergenic | 25.0% |
| AGAAGATCCAAAAGATCTTT+GGG | - | Chr3:50141737-50141756 | MsG0380014122.01.T01:CDS | 30.0% | |
| ATGGTTATATTTGCGTTTAC+AGG | - | Chr3:50141821-50141840 | MsG0380014122.01.T01:CDS | 30.0% | |
| CAAAACAACTGAACAACAAA+AGG | - | Chr3:50141650-50141669 | MsG0380014122.01.T01:CDS | 30.0% | |
| CATGGAGATACAATTAAAGA+AGG | - | Chr3:50141624-50141643 | MsG0380014122.01.T01:CDS | 30.0% | |
| CATTAGAGATGAAAATATCC+AGG | - | Chr3:50142577-50142596 | MsG0380014122.01.T01:CDS | 30.0% | |
| CCAACAATCACTTCAAAATA+AGG | - | Chr3:50142433-50142452 | MsG0380014122.01.T01:CDS | 30.0% | |
| GTCTGTAATCGAATATAACT+CGG | - | Chr3:50141851-50141870 | MsG0380014122.01.T01:CDS | 30.0% | |
| TACATTAGATGCATGAAAAG+TGG | + | Chr3:50141955-50141974 | None:intergenic | 30.0% | |
| TAGAAGATCCAAAAGATCTT+TGG | - | Chr3:50141736-50141755 | MsG0380014122.01.T01:CDS | 30.0% | |
| ! | AAATTGTCCCAAAGATCTTT+TGG | + | Chr3:50141747-50141766 | None:intergenic | 30.0% |
| ! | AAGATCTTTTGGATCTTCTA+TGG | + | Chr3:50141736-50141755 | None:intergenic | 30.0% |
| ! | GCTTTTGATGAAAAATCACT+CGG | - | Chr3:50142061-50142080 | MsG0380014122.01.T01:CDS | 30.0% |
| ! | TGGAAATAATTATCTGGCTT+GGG | - | Chr3:50141566-50141585 | MsG0380014122.01.T01:CDS | 30.0% |
| ! | TTTGAGGCTCTTAATATTTC+TGG | - | Chr3:50141546-50141565 | MsG0380014122.01.T01:CDS | 30.0% |
| ! | TTTTTAGATCCTTATGAAGG+TGG | + | Chr3:50141701-50141720 | None:intergenic | 30.0% |
| !! | GGTTTTAATCGTAATCACAA+TGG | - | Chr3:50142227-50142246 | MsG0380014122.01.T01:CDS | 30.0% |
| !!! | ACCTTTTAAAACCCTTTTCA+CGG | + | Chr3:50141995-50142014 | None:intergenic | 30.0% |
| !!! | CCTTATTTTGAAGTGATTGT+TGG | + | Chr3:50142436-50142455 | None:intergenic | 30.0% |
| AACCATTCATTACGAGCATT+AGG | + | Chr3:50141807-50141826 | None:intergenic | 35.0% | |
| AACTGAACAACAAAAGGCTA+AGG | - | Chr3:50141656-50141675 | MsG0380014122.01.T01:CDS | 35.0% | |
| ACTTCTCTATTAACACTGTG+TGG | - | Chr3:50141888-50141907 | MsG0380014122.01.T01:CDS | 35.0% | |
| ATTAACACTGTGTGGAGAAA+AGG | - | Chr3:50141896-50141915 | MsG0380014122.01.T01:CDS | 35.0% | |
| ATTCATTACGAGCATTAGGA+AGG | + | Chr3:50141803-50141822 | None:intergenic | 35.0% | |
| CTGGAAATAATTATCTGGCT+TGG | - | Chr3:50141565-50141584 | MsG0380014122.01.T01:CDS | 35.0% | |
| TTCCTAATGCTCGTAATGAA+TGG | - | Chr3:50141802-50141821 | MsG0380014122.01.T01:CDS | 35.0% | |
| ! | AGATGGTCAATCTTTTCATC+AGG | + | Chr3:50142557-50142576 | None:intergenic | 35.0% |
| ! | CCTCAAAATCAAGTTTTGCA+AGG | + | Chr3:50141533-50141552 | None:intergenic | 35.0% |
| ! | CCTTGCAAAACTTGATTTTG+AGG | - | Chr3:50141530-50141549 | MsG0380014122.01.T01:CDS | 35.0% |
| ! | CTTTTGGATCTTCTATGGTA+AGG | + | Chr3:50141731-50141750 | None:intergenic | 35.0% |
| !!! | ACCGTGAAAAGGGTTTTAAA+AGG | - | Chr3:50141991-50142010 | MsG0380014122.01.T01:CDS | 35.0% |
| AATTGTATCTCCATGCCCTT+CGG | + | Chr3:50141619-50141638 | None:intergenic | 40.0% | |
| AGAAATCAGCAGCATCTAAG+TGG | + | Chr3:50142526-50142545 | None:intergenic | 40.0% | |
| CAGCAACAATACCGTGAAAA+GGG | - | Chr3:50141981-50142000 | MsG0380014122.01.T01:CDS | 40.0% | |
| CTTAATATCATGCCTGCTTG+TGG | - | Chr3:50142022-50142041 | MsG0380014122.01.T01:CDS | 40.0% | |
| GAAATCAGCAGCATCTAAGT+GGG | + | Chr3:50142525-50142544 | None:intergenic | 40.0% | |
| GATCACTATGGACAAAATCG+TGG | - | Chr3:50142134-50142153 | MsG0380014122.01.T01:CDS | 40.0% | |
| GTAGCAACACATGATCACTA+TGG | - | Chr3:50142122-50142141 | MsG0380014122.01.T01:CDS | 40.0% | |
| ! | GAAGGATGACAGTTTTCTGA+TGG | + | Chr3:50141785-50141804 | None:intergenic | 40.0% |
| ! | GTGTTGCTACATTCACTTCT+GGG | + | Chr3:50142112-50142131 | None:intergenic | 40.0% |
| ! | TATTTTGTTCTGCCACAAGC+AGG | + | Chr3:50142037-50142056 | None:intergenic | 40.0% |
| ! | TGTGTTGCTACATTCACTTC+TGG | + | Chr3:50142113-50142132 | None:intergenic | 40.0% |
| !! | AGTATTTGCTATCGTTGTGG+AGG | - | Chr3:50142356-50142375 | MsG0380014122.01.T01:CDS | 40.0% |
| !! | GAGAGTATTTGCTATCGTTG+TGG | - | Chr3:50142353-50142372 | MsG0380014122.01.T01:CDS | 40.0% |
| CATTTAAATGCCGAAGGGCA+TGG | - | Chr3:50141606-50141625 | MsG0380014122.01.T01:CDS | 45.0% | |
| GCAGCAACAATACCGTGAAA+AGG | - | Chr3:50141980-50141999 | MsG0380014122.01.T01:CDS | 45.0% | |
| GTTGTGGAGGAAAAGGTCAT+TGG | - | Chr3:50142369-50142388 | MsG0380014122.01.T01:CDS | 45.0% | |
| TATGGACAAAATCGTGGTCG+TGG | - | Chr3:50142140-50142159 | MsG0380014122.01.T01:CDS | 45.0% | |
| TGCTATCGTTGTGGAGGAAA+AGG | - | Chr3:50142362-50142381 | MsG0380014122.01.T01:CDS | 45.0% | |
| TTTCACGGTATTGTTGCTGC+AGG | + | Chr3:50141980-50141999 | None:intergenic | 45.0% | |
| ! | GCTACATTCACTTCTGGGAA+TGG | + | Chr3:50142107-50142126 | None:intergenic | 45.0% |
| ! | GTGGTGACGAAGGAATATCA+TGG | + | Chr3:50141682-50141701 | None:intergenic | 45.0% |
| !!! | AAGATGTTTTGGCGTACGAC+AGG | + | Chr3:50142402-50142421 | None:intergenic | 45.0% |
| CCTTCGTCACCACCTTCATA+AGG | - | Chr3:50141689-50141708 | MsG0380014122.01.T01:CDS | 50.0% | |
| ! | CCTTATGAAGGTGGTGACGA+AGG | + | Chr3:50141692-50141711 | None:intergenic | 50.0% |
| ACGTGGTCGTGGTTGTGGAA+GGG | - | Chr3:50142193-50142212 | MsG0380014122.01.T01:CDS | 55.0% | |
| ! | GGGAATGGAGCACTACCAGT+GGG | + | Chr3:50142092-50142111 | None:intergenic | 55.0% |
| ! | TGGGAATGGAGCACTACCAG+TGG | + | Chr3:50142093-50142112 | None:intergenic | 55.0% |
| ! | TGTGGAAGGGGACGTGGTTT+TGG | - | Chr3:50142206-50142225 | MsG0380014122.01.T01:CDS | 55.0% |
| CAAAATCGTGGTCGTGGCCG+TGG | - | Chr3:50142146-50142165 | MsG0380014122.01.T01:CDS | 60.0% | |
| CACGTCCACGACCATGACCA+CGG | + | Chr3:50142166-50142185 | None:intergenic | 60.0% | |
| CGTGGTCGTGGTTGTGGAAG+GGG | - | Chr3:50142194-50142213 | MsG0380014122.01.T01:CDS | 60.0% | |
| GACGTGGTCGTGGTTGTGGA+AGG | - | Chr3:50142192-50142211 | MsG0380014122.01.T01:CDS | 60.0% | |
| ! | AATCACTCGGCTCGTCCCAC+TGG | - | Chr3:50142074-50142093 | MsG0380014122.01.T01:CDS | 60.0% |
| CATGGTCGTGGACGTGGACG+TGG | - | Chr3:50142170-50142189 | MsG0380014122.01.T01:CDS | 65.0% | |
| CGTGGACGTGGTCGTGGTTG+TGG | - | Chr3:50142188-50142207 | MsG0380014122.01.T01:CDS | 65.0% | |
| CGTGGTCATGGTCGTGGACG+TGG | - | Chr3:50142164-50142183 | MsG0380014122.01.T01:CDS | 65.0% | |
| CGTGGTTGTGGAAGGGGACG+TGG | - | Chr3:50142200-50142219 | MsG0380014122.01.T01:CDS | 65.0% | |
| CGTGGACGTGGACGTGGACG+TGG | - | Chr3:50142176-50142195 | MsG0380014122.01.T01:CDS | 70.0% | |
| CGTGGACGTGGACGTGGTCG+TGG | - | Chr3:50142182-50142201 | MsG0380014122.01.T01:CDS | 70.0% | |
| CGTGGCCGTGGTCATGGTCG+TGG | - | Chr3:50142158-50142177 | MsG0380014122.01.T01:CDS | 70.0% | |
| CGTGGTCGTGGCCGTGGTCA+TGG | - | Chr3:50142152-50142171 | MsG0380014122.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 50141522 | 50142604 | 50141522 | ID=MsG0380014122.01;Name=MsG0380014122.01 |
| Chr3 | mRNA | 50141522 | 50142604 | 50141522 | ID=MsG0380014122.01.T01;Parent=MsG0380014122.01;Name=MsG0380014122.01.T01;_AED=0.28;_eAED=0.28;_QI=0|-1|0|1|-1|1|1|0|360 |
| Chr3 | exon | 50141522 | 50142604 | 50141522 | ID=MsG0380014122.01.T01:exon:9175;Parent=MsG0380014122.01.T01 |
| Chr3 | CDS | 50141522 | 50142604 | 50141522 | ID=MsG0380014122.01.T01:cds;Parent=MsG0380014122.01.T01 |
| Gene Sequence |
| Protein sequence |
