Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022862.01.T01 | XP_039688731.1 | 64.402 | 368 | 102 | 5 | 1 | 360 | 1 | 347 | 1.08E-152 | 444 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022862.01.T01 | A0A6D2I977 | 60.112 | 356 | 108 | 6 | 1 | 343 | 1 | 335 | 1.61e-138 | 406 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0380012021.01 | MsG0480022862.01 | 0.824739 | 6.857387e-54 | 6.127397e-51 |
| MsG0380012033.01 | MsG0480022862.01 | 0.801763 | 7.722128e-49 | 3.718110e-46 |
| MsG0380014122.01 | MsG0480022862.01 | 0.939934 | 5.499418e-100 | 5.829807e-95 |
| MsG0480021775.01 | MsG0480022862.01 | 0.890488 | 9.414251e-74 | 7.930100e-70 |
| MsG0480022862.01 | MsG0580024918.01 | 0.928215 | 3.954992e-92 | 2.058423e-87 |
| MsG0480022862.01 | MsG0580027617.01 | 0.968875 | 2.650176e-129 | 2.295112e-123 |
| MsG0480022862.01 | MsG0580029101.01 | 0.962251 | 1.179472e-120 | 5.831544e-115 |
| MsG0480022862.01 | MsG0780036201.01 | 0.809638 | 1.713670e-50 | 1.011598e-47 |
| MsG0480022862.01 | MsG0780038113.01 | 0.801309 | 9.568048e-49 | 4.554538e-46 |
| MsG0480022862.01 | MsG0780038597.01 | 0.939426 | 1.297473e-99 | 1.331810e-94 |
| MsG0480022862.01 | MsG0780039503.01 | 0.804265 | 2.347299e-49 | 1.204869e-46 |
| MsG0480022862.01 | MsG0780039544.01 | 0.826597 | 2.486444e-54 | 2.342228e-51 |
| MsG0480022862.01 | MsG0780040186.01 | 0.860660 | 1.769489e-63 | 4.874178e-60 |
| MsG0480022862.01 | MsG0780041764.01 | 0.806540 | 7.828009e-50 | 4.259961e-47 |
| MsG0380015877.01 | MsG0480022862.01 | 0.813066 | 3.089405e-51 | 1.997116e-48 |
| MsG0280006510.01 | MsG0480022862.01 | 0.863832 | 1.878098e-64 | 5.772701e-61 |
| MsG0280010102.01 | MsG0480022862.01 | 0.823861 | 1.102511e-53 | 9.607830e-51 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022862.01.T01 | MTR_7g062720 | 65.909 | 132 | 45 | 0 | 1 | 132 | 1 | 132 | 9.98e-60 | 190 |
| MsG0480022862.01.T01 | MTR_5g061150 | 62.992 | 127 | 47 | 0 | 20 | 146 | 10 | 136 | 2.18e-48 | 160 |
| MsG0480022862.01.T01 | MTR_4g037355 | 57.971 | 138 | 35 | 5 | 151 | 287 | 1 | 116 | 2.52e-41 | 142 |
| MsG0480022862.01.T01 | MTR_4g112730 | 71.831 | 71 | 18 | 1 | 138 | 208 | 1 | 69 | 1.03e-26 | 102 |
| MsG0480022862.01.T01 | MTR_1g036690 | 58.537 | 82 | 27 | 3 | 280 | 360 | 5 | 80 | 1.06e-22 | 90.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 68 sgRNAs with CRISPR-Local
Find 85 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAGGCTCTTAATATTTC+TGG | 0.080746 | 4:-77677492 | MsG0480022862.01.T01:CDS |
| TTCGGCATTTAAATGAATTT+TGG | 0.166319 | 4:+77677440 | None:intergenic |
| CACTTCAAAATAAGGATAAA+AGG | 0.234592 | 4:-77676597 | MsG0480022862.01.T01:CDS |
| CCAACAATCACTTCAAAATA+AGG | 0.244294 | 4:-77676605 | MsG0480022862.01.T01:CDS |
| ATGGTTATATTTGCGTTTAC+AGG | 0.259438 | 4:-77677217 | MsG0480022862.01.T01:CDS |
| TATGGAAGGGGACGTGGTTT+TGG | 0.259444 | 4:-77676832 | MsG0480022862.01.T01:CDS |
| AAATTGTCCCAAAGATCTTT+TGG | 0.267031 | 4:+77677294 | None:intergenic |
| TATTTCTGGAAATAATTATC+TGG | 0.282933 | 4:-77677478 | MsG0480022862.01.T01:CDS |
| TAGAAGATCCAAAAGATCTT+TGG | 0.283634 | 4:-77677302 | MsG0480022862.01.T01:CDS |
| TGTGTTGCTACATTCACTTC+TGG | 0.294995 | 4:+77676928 | None:intergenic |
| TAAAGATCAACAAGATGTTT+TGG | 0.333763 | 4:+77676628 | None:intergenic |
| TATAGGCGGGGTTCTATTCC+TGG | 0.336951 | 4:+77676443 | None:intergenic |
| TGAAGATGATTATGGTAATA+TGG | 0.338642 | 4:-77676545 | MsG0480022862.01.T01:CDS |
| CTGGAAATAATTATCTGGCT+TGG | 0.347827 | 4:-77677473 | MsG0480022862.01.T01:CDS |
| TGGAAATAATTATCTGGCTT+GGG | 0.353242 | 4:-77677472 | MsG0480022862.01.T01:CDS |
| CGTGGACGTGGTCGTGGTTA+TGG | 0.362984 | 4:-77676850 | MsG0480022862.01.T01:CDS |
| AACCATTCATTACGAGCATT+AGG | 0.386252 | 4:+77677234 | None:intergenic |
| GAAAATGATGAAGATGATTA+TGG | 0.391347 | 4:-77676553 | MsG0480022862.01.T01:CDS |
| TTTGGGACAATTTAAAAGAA+AGG | 0.395342 | 4:-77677284 | MsG0480022862.01.T01:CDS |
| AGAAGATCCAAAAGATCTTT+GGG | 0.400056 | 4:-77677301 | MsG0480022862.01.T01:CDS |
| TGCTATCGTTGTGGAGGAAA+AGG | 0.414829 | 4:-77676676 | MsG0480022862.01.T01:CDS |
| GTGTTGCTACATTCACTTCT+GGG | 0.423307 | 4:+77676929 | None:intergenic |
| CGTGGTTATGGAAGGGGACG+TGG | 0.429618 | 4:-77676838 | MsG0480022862.01.T01:CDS |
| CCTTCGTCACCACCTTCATA+AGG | 0.433246 | 4:-77677349 | MsG0480022862.01.T01:CDS |
| ATTAACACTGTGTGGAGAAA+AGG | 0.440407 | 4:-77677142 | MsG0480022862.01.T01:CDS |
| CAAAATCGTGGTCGTGGCCG+TGG | 0.442209 | 4:-77676892 | MsG0480022862.01.T01:CDS |
| CGTGGTCGTGGCCGTGGTCA+TGG | 0.454221 | 4:-77676886 | MsG0480022862.01.T01:CDS |
| CAAAACAACTGAACAACAAA+AGG | 0.454927 | 4:-77677388 | MsG0480022862.01.T01:CDS |
| AATTGTATCTCCATGCCCTT+CGG | 0.460742 | 4:+77677422 | None:intergenic |
| AGAAATCAGCAGCATCTAAG+TGG | 0.464577 | 4:+77676515 | None:intergenic |
| GCAGCAACAATACCGTGAAA+AGG | 0.470239 | 4:-77677058 | MsG0480022862.01.T01:CDS |
| AATGTTGTAAAGAATGATAT+TGG | 0.471241 | 4:-77676727 | MsG0480022862.01.T01:CDS |
| AATCACTCGGCTCGTCCCAC+TGG | 0.475930 | 4:-77676964 | MsG0480022862.01.T01:CDS |
| CAGCAACAATACCGTGAAAA+GGG | 0.478771 | 4:-77677057 | MsG0480022862.01.T01:CDS |
| GCTACATTCACTTCTGGGAA+TGG | 0.483138 | 4:+77676934 | None:intergenic |
| ACTTCAAAATAAGGATAAAA+GGG | 0.487291 | 4:-77676596 | MsG0480022862.01.T01:CDS |
| TACATTAGATGCATGAAAAG+TGG | 0.490606 | 4:+77677086 | None:intergenic |
| CATTTAAATGCCGAAGGGCA+TGG | 0.494088 | 4:-77677432 | MsG0480022862.01.T01:CDS |
| GACGTGGTCGTGGTTATGGA+AGG | 0.501950 | 4:-77676846 | MsG0480022862.01.T01:CDS |
| GTAGCAACACATGATCACTA+TGG | 0.504040 | 4:-77676916 | MsG0480022862.01.T01:CDS |
| GTTGTGGAGGAAAAGGTCAT+TGG | 0.504176 | 4:-77676669 | MsG0480022862.01.T01:CDS |
| CGTGGCCGTGGTCATGGTCG+TGG | 0.506333 | 4:-77676880 | MsG0480022862.01.T01:CDS |
| TTCCTAATGCTCGTAATGAA+TGG | 0.506622 | 4:-77677236 | MsG0480022862.01.T01:CDS |
| CATGGTCGTGGACGTGGACG+TGG | 0.524744 | 4:-77676868 | MsG0480022862.01.T01:CDS |
| CGTGGACGTGGACGTGGTCG+TGG | 0.524981 | 4:-77676856 | MsG0480022862.01.T01:CDS |
| CATTAGAGATGAAAATATCC+AGG | 0.532865 | 4:-77676461 | MsG0480022862.01.T01:CDS |
| CATGGAGATACAATTAAAGA+AGG | 0.533844 | 4:-77677414 | MsG0480022862.01.T01:CDS |
| AAAATTCATTTAAATGCCGA+AGG | 0.537172 | 4:-77677438 | MsG0480022862.01.T01:CDS |
| CGTGGTCATGGTCGTGGACG+TGG | 0.540833 | 4:-77676874 | MsG0480022862.01.T01:CDS |
| CGTGGACGTGGACGTGGACG+TGG | 0.546682 | 4:-77676862 | MsG0480022862.01.T01:CDS |
| CGTGGTCGTGGTTATGGAAG+GGG | 0.551769 | 4:-77676844 | MsG0480022862.01.T01:CDS |
| CTTAATATCATGCCTGCTTG+TGG | 0.567363 | 4:-77677016 | MsG0480022862.01.T01:CDS |
| TATGGACAAAATCGTGGTCG+TGG | 0.573891 | 4:-77676898 | MsG0480022862.01.T01:CDS |
| GTCTGTAATCGAATATAACT+CGG | 0.574961 | 4:-77677187 | MsG0480022862.01.T01:CDS |
| AACTGAACAACAAAAGGCTA+AGG | 0.582581 | 4:-77677382 | MsG0480022862.01.T01:CDS |
| GAGAGTATTTGCTATCGTTG+TGG | 0.583351 | 4:-77676685 | MsG0480022862.01.T01:CDS |
| ATTCATTACGAGCATTAGGA+AGG | 0.589984 | 4:+77677238 | None:intergenic |
| CCTTATGAAGGTGGTGACGA+AGG | 0.598722 | 4:+77677349 | None:intergenic |
| ACGTGGTCGTGGTTATGGAA+GGG | 0.598966 | 4:-77676845 | MsG0480022862.01.T01:CDS |
| AGTATTTGCTATCGTTGTGG+AGG | 0.599695 | 4:-77676682 | MsG0480022862.01.T01:CDS |
| GAAATCAGCAGCATCTAAGT+GGG | 0.621669 | 4:+77676516 | None:intergenic |
| AAATTCATTTAAATGCCGAA+GGG | 0.631745 | 4:-77677437 | MsG0480022862.01.T01:CDS |
| CACGTCCACGACCATGACCA+CGG | 0.661673 | 4:+77676875 | None:intergenic |
| GTGGTGACGAAGGAATATCA+TGG | 0.663314 | 4:+77677359 | None:intergenic |
| ACTTCTCTATTAACACTGTG+TGG | 0.668278 | 4:-77677150 | MsG0480022862.01.T01:CDS |
| TGGGAATGGAGCACTACCAG+TGG | 0.672955 | 4:+77676948 | None:intergenic |
| GGGAATGGAGCACTACCAGT+GGG | 0.676344 | 4:+77676949 | None:intergenic |
| GATCACTATGGACAAAATCG+TGG | 0.728183 | 4:-77676904 | MsG0480022862.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGTTGTAAAGAATGATAT+TGG | - | Chr4:77677245-77677264 | MsG0480022862.01.T01:CDS | 20.0% |
| !! | ACTTCAAAATAAGGATAAAA+GGG | - | Chr4:77677376-77677395 | MsG0480022862.01.T01:CDS | 20.0% |
| !!! | TATTTCTGGAAATAATTATC+TGG | - | Chr4:77676494-77676513 | MsG0480022862.01.T01:CDS | 20.0% |
| ! | AAAATTCATTTAAATGCCGA+AGG | - | Chr4:77676534-77676553 | MsG0480022862.01.T01:CDS | 25.0% |
| ! | AAATTCATTTAAATGCCGAA+GGG | - | Chr4:77676535-77676554 | MsG0480022862.01.T01:CDS | 25.0% |
| ! | CACTTCAAAATAAGGATAAA+AGG | - | Chr4:77677375-77677394 | MsG0480022862.01.T01:CDS | 25.0% |
| ! | GAAAATGATGAAGATGATTA+TGG | - | Chr4:77677419-77677438 | MsG0480022862.01.T01:CDS | 25.0% |
| ! | TGAAGATGATTATGGTAATA+TGG | - | Chr4:77677427-77677446 | MsG0480022862.01.T01:CDS | 25.0% |
| !! | TAAAGATCAACAAGATGTTT+TGG | + | Chr4:77677347-77677366 | None:intergenic | 25.0% |
| !! | TATTTTCATCTCTAATGAGA+TGG | + | Chr4:77677508-77677527 | None:intergenic | 25.0% |
| !! | TTACAACATTTTTCATCTTC+TGG | + | Chr4:77677235-77677254 | None:intergenic | 25.0% |
| !! | TTCGGCATTTAAATGAATTT+TGG | + | Chr4:77676535-77676554 | None:intergenic | 25.0% |
| !! | TTTGGGACAATTTAAAAGAA+AGG | - | Chr4:77676688-77676707 | MsG0480022862.01.T01:CDS | 25.0% |
| !!! | CATTTTTTAGATCCTTATGA+AGG | + | Chr4:77676638-77676657 | None:intergenic | 25.0% |
| !!! | GAGAAAATGTGTTTTTGTTT+TGG | + | Chr4:77677211-77677230 | None:intergenic | 25.0% |
| AGAAGATCCAAAAGATCTTT+GGG | - | Chr4:77676671-77676690 | MsG0480022862.01.T01:CDS | 30.0% | |
| ATGGTTATATTTGCGTTTAC+AGG | - | Chr4:77676755-77676774 | MsG0480022862.01.T01:CDS | 30.0% | |
| CAAAACAACTGAACAACAAA+AGG | - | Chr4:77676584-77676603 | MsG0480022862.01.T01:CDS | 30.0% | |
| CATGGAGATACAATTAAAGA+AGG | - | Chr4:77676558-77676577 | MsG0480022862.01.T01:CDS | 30.0% | |
| CATTAGAGATGAAAATATCC+AGG | - | Chr4:77677511-77677530 | MsG0480022862.01.T01:CDS | 30.0% | |
| CCAACAATCACTTCAAAATA+AGG | - | Chr4:77677367-77677386 | MsG0480022862.01.T01:CDS | 30.0% | |
| GTCTGTAATCGAATATAACT+CGG | - | Chr4:77676785-77676804 | MsG0480022862.01.T01:CDS | 30.0% | |
| TACATTAGATGCATGAAAAG+TGG | + | Chr4:77676889-77676908 | None:intergenic | 30.0% | |
| TAGAAGATCCAAAAGATCTT+TGG | - | Chr4:77676670-77676689 | MsG0480022862.01.T01:CDS | 30.0% | |
| ! | AAATTGTCCCAAAGATCTTT+TGG | + | Chr4:77676681-77676700 | None:intergenic | 30.0% |
| ! | AAGATCTTTTGGATCTTCTA+TGG | + | Chr4:77676670-77676689 | None:intergenic | 30.0% |
| ! | GCTTTTGATGAAAAATCACT+CGG | - | Chr4:77676995-77677014 | MsG0480022862.01.T01:CDS | 30.0% |
| ! | TGGAAATAATTATCTGGCTT+GGG | - | Chr4:77676500-77676519 | MsG0480022862.01.T01:CDS | 30.0% |
| ! | TTTGAGGCTCTTAATATTTC+TGG | - | Chr4:77676480-77676499 | MsG0480022862.01.T01:CDS | 30.0% |
| ! | TTTTTAGATCCTTATGAAGG+TGG | + | Chr4:77676635-77676654 | None:intergenic | 30.0% |
| !! | GGTTTTAATCGTAATCACAA+TGG | - | Chr4:77677161-77677180 | MsG0480022862.01.T01:CDS | 30.0% |
| !!! | ACCTTTTAAAACCCTTTTCA+CGG | + | Chr4:77676929-77676948 | None:intergenic | 30.0% |
| !!! | CCTTATTTTGAAGTGATTGT+TGG | + | Chr4:77677370-77677389 | None:intergenic | 30.0% |
| AACCATTCATTACGAGCATT+AGG | + | Chr4:77676741-77676760 | None:intergenic | 35.0% | |
| AACTGAACAACAAAAGGCTA+AGG | - | Chr4:77676590-77676609 | MsG0480022862.01.T01:CDS | 35.0% | |
| ACTTCTCTATTAACACTGTG+TGG | - | Chr4:77676822-77676841 | MsG0480022862.01.T01:CDS | 35.0% | |
| ATTAACACTGTGTGGAGAAA+AGG | - | Chr4:77676830-77676849 | MsG0480022862.01.T01:CDS | 35.0% | |
| ATTCATTACGAGCATTAGGA+AGG | + | Chr4:77676737-77676756 | None:intergenic | 35.0% | |
| CTGGAAATAATTATCTGGCT+TGG | - | Chr4:77676499-77676518 | MsG0480022862.01.T01:CDS | 35.0% | |
| TTCCTAATGCTCGTAATGAA+TGG | - | Chr4:77676736-77676755 | MsG0480022862.01.T01:CDS | 35.0% | |
| ! | AGATGGTCAATCTTTTCATC+AGG | + | Chr4:77677491-77677510 | None:intergenic | 35.0% |
| ! | CCTCAAAATCAAGTTTTGCA+AGG | + | Chr4:77676467-77676486 | None:intergenic | 35.0% |
| ! | CCTTGCAAAACTTGATTTTG+AGG | - | Chr4:77676464-77676483 | MsG0480022862.01.T01:CDS | 35.0% |
| ! | CTTTTGGATCTTCTATGGTA+AGG | + | Chr4:77676665-77676684 | None:intergenic | 35.0% |
| !!! | ACCGTGAAAAGGGTTTTAAA+AGG | - | Chr4:77676925-77676944 | MsG0480022862.01.T01:CDS | 35.0% |
| AATTGTATCTCCATGCCCTT+CGG | + | Chr4:77676553-77676572 | None:intergenic | 40.0% | |
| AGAAATCAGCAGCATCTAAG+TGG | + | Chr4:77677460-77677479 | None:intergenic | 40.0% | |
| CAGCAACAATACCGTGAAAA+GGG | - | Chr4:77676915-77676934 | MsG0480022862.01.T01:CDS | 40.0% | |
| CTTAATATCATGCCTGCTTG+TGG | - | Chr4:77676956-77676975 | MsG0480022862.01.T01:CDS | 40.0% | |
| GAAATCAGCAGCATCTAAGT+GGG | + | Chr4:77677459-77677478 | None:intergenic | 40.0% | |
| GATCACTATGGACAAAATCG+TGG | - | Chr4:77677068-77677087 | MsG0480022862.01.T01:CDS | 40.0% | |
| GTAGCAACACATGATCACTA+TGG | - | Chr4:77677056-77677075 | MsG0480022862.01.T01:CDS | 40.0% | |
| ! | GAAGGATGACAGTTTTCTGA+TGG | + | Chr4:77676719-77676738 | None:intergenic | 40.0% |
| ! | GTGTTGCTACATTCACTTCT+GGG | + | Chr4:77677046-77677065 | None:intergenic | 40.0% |
| ! | TATTTTGTTCTGCCACAAGC+AGG | + | Chr4:77676971-77676990 | None:intergenic | 40.0% |
| ! | TGTGTTGCTACATTCACTTC+TGG | + | Chr4:77677047-77677066 | None:intergenic | 40.0% |
| !! | AGTATTTGCTATCGTTGTGG+AGG | - | Chr4:77677290-77677309 | MsG0480022862.01.T01:CDS | 40.0% |
| !! | GAGAGTATTTGCTATCGTTG+TGG | - | Chr4:77677287-77677306 | MsG0480022862.01.T01:CDS | 40.0% |
| CATTTAAATGCCGAAGGGCA+TGG | - | Chr4:77676540-77676559 | MsG0480022862.01.T01:CDS | 45.0% | |
| GCAGCAACAATACCGTGAAA+AGG | - | Chr4:77676914-77676933 | MsG0480022862.01.T01:CDS | 45.0% | |
| GTTGTGGAGGAAAAGGTCAT+TGG | - | Chr4:77677303-77677322 | MsG0480022862.01.T01:CDS | 45.0% | |
| TATGGACAAAATCGTGGTCG+TGG | - | Chr4:77677074-77677093 | MsG0480022862.01.T01:CDS | 45.0% | |
| TGCTATCGTTGTGGAGGAAA+AGG | - | Chr4:77677296-77677315 | MsG0480022862.01.T01:CDS | 45.0% | |
| ! | GCTACATTCACTTCTGGGAA+TGG | + | Chr4:77677041-77677060 | None:intergenic | 45.0% |
| ! | GTGGTGACGAAGGAATATCA+TGG | + | Chr4:77676616-77676635 | None:intergenic | 45.0% |
| !!! | AAGATGTTTTGGCGTACGAC+AGG | + | Chr4:77677336-77677355 | None:intergenic | 45.0% |
| ACGTGGTCGTGGTTATGGAA+GGG | - | Chr4:77677127-77677146 | MsG0480022862.01.T01:CDS | 50.0% | |
| CCTTCGTCACCACCTTCATA+AGG | - | Chr4:77676623-77676642 | MsG0480022862.01.T01:CDS | 50.0% | |
| ! | CCTTATGAAGGTGGTGACGA+AGG | + | Chr4:77676626-77676645 | None:intergenic | 50.0% |
| ! | TATGGAAGGGGACGTGGTTT+TGG | - | Chr4:77677140-77677159 | MsG0480022862.01.T01:CDS | 50.0% |
| CGTGGTCGTGGTTATGGAAG+GGG | - | Chr4:77677128-77677147 | MsG0480022862.01.T01:CDS | 55.0% | |
| GACGTGGTCGTGGTTATGGA+AGG | - | Chr4:77677126-77677145 | MsG0480022862.01.T01:CDS | 55.0% | |
| ! | GGGAATGGAGCACTACCAGT+GGG | + | Chr4:77677026-77677045 | None:intergenic | 55.0% |
| ! | TGGGAATGGAGCACTACCAG+TGG | + | Chr4:77677027-77677046 | None:intergenic | 55.0% |
| CAAAATCGTGGTCGTGGCCG+TGG | - | Chr4:77677080-77677099 | MsG0480022862.01.T01:CDS | 60.0% | |
| CACGTCCACGACCATGACCA+CGG | + | Chr4:77677100-77677119 | None:intergenic | 60.0% | |
| CGTGGACGTGGTCGTGGTTA+TGG | - | Chr4:77677122-77677141 | MsG0480022862.01.T01:CDS | 60.0% | |
| CGTGGTTATGGAAGGGGACG+TGG | - | Chr4:77677134-77677153 | MsG0480022862.01.T01:CDS | 60.0% | |
| ! | AATCACTCGGCTCGTCCCAC+TGG | - | Chr4:77677008-77677027 | MsG0480022862.01.T01:CDS | 60.0% |
| CATGGTCGTGGACGTGGACG+TGG | - | Chr4:77677104-77677123 | MsG0480022862.01.T01:CDS | 65.0% | |
| CGTGGTCATGGTCGTGGACG+TGG | - | Chr4:77677098-77677117 | MsG0480022862.01.T01:CDS | 65.0% | |
| CGTGGACGTGGACGTGGACG+TGG | - | Chr4:77677110-77677129 | MsG0480022862.01.T01:CDS | 70.0% | |
| CGTGGACGTGGACGTGGTCG+TGG | - | Chr4:77677116-77677135 | MsG0480022862.01.T01:CDS | 70.0% | |
| CGTGGCCGTGGTCATGGTCG+TGG | - | Chr4:77677092-77677111 | MsG0480022862.01.T01:CDS | 70.0% | |
| CGTGGTCGTGGCCGTGGTCA+TGG | - | Chr4:77677086-77677105 | MsG0480022862.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 77676456 | 77677538 | 77676456 | ID=MsG0480022862.01;Name=MsG0480022862.01 |
| Chr4 | mRNA | 77676456 | 77677538 | 77676456 | ID=MsG0480022862.01.T01;Parent=MsG0480022862.01;Name=MsG0480022862.01.T01;_AED=0.28;_eAED=0.28;_QI=0|-1|0|1|-1|1|1|0|360 |
| Chr4 | exon | 77676456 | 77677538 | 77676456 | ID=MsG0480022862.01.T01:exon:4897;Parent=MsG0480022862.01.T01 |
| Chr4 | CDS | 77676456 | 77677538 | 77676456 | ID=MsG0480022862.01.T01:cds;Parent=MsG0480022862.01.T01 |
| Gene Sequence |
| Protein sequence |
