Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030560.01.T01 | XP_003608194.2 | 92.941 | 170 | 12 | 0 | 212 | 381 | 266 | 435 | 1.49E-105 | 332 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030560.01.T01 | O80874 | 71.176 | 170 | 49 | 0 | 212 | 381 | 231 | 400 | 4.45E-72 | 237 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030560.01.T01 | G7JQS9 | 92.941 | 170 | 12 | 0 | 212 | 381 | 266 | 435 | 7.10e-106 | 332 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047869.01 | MsG0680030560.01 | 0.805965 | 1.034408e-49 | 5.547330e-47 |
| MsG0280011446.01 | MsG0680030560.01 | 0.816150 | 6.415685e-52 | 4.510407e-49 |
| MsG0580024082.01 | MsG0680030560.01 | 0.834888 | 2.310108e-56 | 2.778545e-53 |
| MsG0580024825.01 | MsG0680030560.01 | 0.808725 | 2.689438e-50 | 1.549229e-47 |
| MsG0380017349.01 | MsG0680030560.01 | 0.802508 | 5.425827e-49 | 2.662615e-46 |
| MsG0480018425.01 | MsG0680030560.01 | 0.807493 | 4.919973e-50 | 2.744329e-47 |
| MsG0680030560.01 | MsG0680035909.01 | 0.821252 | 4.457914e-53 | 3.607859e-50 |
| MsG0680030560.01 | MsG0880041836.01 | 0.837356 | 5.455728e-57 | 7.068525e-54 |
| MsG0680030560.01 | MsG0880045848.01 | 0.817952 | 2.525214e-52 | 1.865012e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030560.01.T01 | MTR_4g090580 | 92.941 | 170 | 12 | 0 | 212 | 381 | 266 | 435 | 1.80e-109 | 332 |
| MsG0680030560.01.T01 | MTR_2g046130 | 94.444 | 180 | 10 | 0 | 1 | 180 | 1 | 180 | 5.80e-107 | 325 |
| MsG0680030560.01.T01 | MTR_5g071250 | 72.222 | 180 | 50 | 0 | 204 | 383 | 216 | 395 | 2.68e-80 | 253 |
| MsG0680030560.01.T01 | MTR_5g071250 | 68.750 | 192 | 60 | 0 | 204 | 395 | 216 | 407 | 2.52e-79 | 253 |
| MsG0680030560.01.T01 | MTR_3g464380 | 67.708 | 192 | 62 | 0 | 207 | 398 | 222 | 413 | 6.98e-77 | 247 |
| MsG0680030560.01.T01 | MTR_4g123880 | 64.444 | 180 | 59 | 3 | 1 | 180 | 1 | 175 | 7.51e-72 | 233 |
| MsG0680030560.01.T01 | MTR_4g123880 | 64.444 | 180 | 59 | 3 | 1 | 180 | 1 | 175 | 2.46e-71 | 232 |
| MsG0680030560.01.T01 | MTR_7g111690 | 48.958 | 192 | 85 | 6 | 1 | 180 | 1 | 191 | 1.22e-43 | 159 |
| MsG0680030560.01.T01 | MTR_7g111690 | 48.958 | 192 | 85 | 6 | 1 | 180 | 1 | 191 | 1.84e-43 | 158 |
| MsG0680030560.01.T01 | MTR_4g091240 | 36.364 | 187 | 106 | 5 | 204 | 380 | 97 | 280 | 6.03e-30 | 120 |
| MsG0680030560.01.T01 | MTR_4g091240 | 38.235 | 170 | 95 | 4 | 204 | 363 | 201 | 370 | 1.44e-29 | 120 |
| MsG0680030560.01.T01 | MTR_2g011730 | 39.506 | 162 | 88 | 4 | 212 | 363 | 209 | 370 | 2.44e-29 | 120 |
| MsG0680030560.01.T01 | MTR_4g045997 | 37.500 | 160 | 91 | 4 | 213 | 363 | 213 | 372 | 3.14e-26 | 110 |
| MsG0680030560.01.T01 | MTR_4g045997 | 37.500 | 160 | 91 | 4 | 213 | 363 | 213 | 372 | 3.38e-26 | 110 |
| MsG0680030560.01.T01 | MTR_4g045993 | 31.220 | 205 | 115 | 6 | 170 | 363 | 175 | 364 | 1.76e-24 | 105 |
| MsG0680030560.01.T01 | MTR_5g091380 | 41.989 | 181 | 88 | 7 | 5 | 178 | 7 | 177 | 6.05e-21 | 95.1 |
| MsG0680030560.01.T01 | MTR_3g047890 | 36.313 | 179 | 103 | 3 | 5 | 180 | 7 | 177 | 2.07e-20 | 93.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030560.01.T01 | AT2G29990 | 71.176 | 170 | 49 | 0 | 212 | 381 | 231 | 400 | 4.53e-73 | 237 |
| MsG0680030560.01.T01 | AT1G07180 | 69.714 | 175 | 53 | 0 | 207 | 381 | 228 | 402 | 1.58e-72 | 236 |
| MsG0680030560.01.T01 | AT5G18500 | 43.716 | 183 | 79 | 9 | 1 | 180 | 1 | 162 | 3.52e-33 | 130 |
| MsG0680030560.01.T01 | AT5G18500 | 43.716 | 183 | 79 | 9 | 1 | 180 | 1 | 162 | 3.52e-33 | 130 |
| MsG0680030560.01.T01 | AT5G18500 | 43.716 | 183 | 79 | 9 | 1 | 180 | 1 | 162 | 3.52e-33 | 130 |
| MsG0680030560.01.T01 | AT5G18500 | 43.716 | 183 | 79 | 9 | 1 | 180 | 1 | 162 | 3.52e-33 | 130 |
| MsG0680030560.01.T01 | AT5G18500 | 43.716 | 183 | 79 | 9 | 1 | 180 | 1 | 162 | 3.52e-33 | 130 |
| MsG0680030560.01.T01 | AT5G18500 | 43.716 | 183 | 79 | 9 | 1 | 180 | 1 | 162 | 3.52e-33 | 130 |
| MsG0680030560.01.T01 | AT3G59110 | 40.741 | 189 | 94 | 9 | 3 | 180 | 5 | 186 | 3.02e-28 | 116 |
| MsG0680030560.01.T01 | AT1G56720 | 43.956 | 182 | 89 | 5 | 1 | 178 | 1 | 173 | 8.07e-28 | 115 |
| MsG0680030560.01.T01 | AT1G56720 | 43.956 | 182 | 89 | 5 | 1 | 178 | 1 | 173 | 8.07e-28 | 115 |
| MsG0680030560.01.T01 | AT1G56720 | 43.956 | 182 | 89 | 5 | 1 | 178 | 1 | 173 | 8.07e-28 | 115 |
| MsG0680030560.01.T01 | AT1G56720 | 43.956 | 182 | 89 | 5 | 1 | 178 | 1 | 173 | 8.07e-28 | 115 |
| MsG0680030560.01.T01 | AT4G28220 | 33.146 | 178 | 107 | 5 | 212 | 380 | 206 | 380 | 3.63e-27 | 113 |
| MsG0680030560.01.T01 | AT4G28220 | 33.146 | 178 | 107 | 5 | 212 | 380 | 206 | 380 | 5.67e-27 | 113 |
| MsG0680030560.01.T01 | AT2G42960 | 42.935 | 184 | 90 | 10 | 3 | 180 | 5 | 179 | 3.87e-25 | 105 |
| MsG0680030560.01.T01 | AT2G42960 | 42.935 | 184 | 90 | 10 | 3 | 180 | 5 | 179 | 1.15e-24 | 105 |
| MsG0680030560.01.T01 | AT2G42960 | 42.935 | 184 | 90 | 10 | 3 | 180 | 5 | 179 | 1.15e-24 | 105 |
| MsG0680030560.01.T01 | AT2G42960 | 42.935 | 184 | 90 | 10 | 3 | 180 | 5 | 179 | 1.15e-24 | 105 |
| MsG0680030560.01.T01 | AT2G42960 | 42.935 | 184 | 90 | 10 | 3 | 180 | 5 | 179 | 1.15e-24 | 105 |
| MsG0680030560.01.T01 | AT3G17420 | 41.111 | 180 | 74 | 8 | 1 | 179 | 1 | 149 | 1.19e-23 | 102 |
| MsG0680030560.01.T01 | AT4G05020 | 36.905 | 168 | 98 | 4 | 204 | 363 | 206 | 373 | 6.02e-22 | 98.6 |
| MsG0680030560.01.T01 | AT4G05020 | 36.905 | 168 | 98 | 4 | 204 | 363 | 206 | 373 | 6.96e-22 | 98.2 |
| MsG0680030560.01.T01 | AT4G21490 | 36.310 | 168 | 99 | 4 | 204 | 363 | 204 | 371 | 7.61e-22 | 98.2 |
| MsG0680030560.01.T01 | AT4G21490 | 36.310 | 168 | 99 | 4 | 204 | 363 | 203 | 370 | 7.81e-22 | 98.2 |
| MsG0680030560.01.T01 | AT2G20800 | 35.870 | 184 | 109 | 4 | 189 | 363 | 195 | 378 | 8.07e-20 | 92.0 |
| MsG0680030560.01.T01 | AT1G09440 | 38.922 | 167 | 83 | 5 | 17 | 180 | 3 | 153 | 1.61e-16 | 81.6 |
| MsG0680030560.01.T01 | AT1G09440 | 38.922 | 167 | 83 | 5 | 17 | 180 | 3 | 153 | 1.61e-16 | 81.6 |
Find 105 sgRNAs with CRISPR-Local
Find 165 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTTCTATTTCATTCTATT+TGG | 0.136620 | 6:-5290441 | MsG0680030560.01.T01:three_prime_UTR |
| CCTTGAACTTACATTATTAT+TGG | 0.176841 | 6:-5292113 | MsG0680030560.01.T01:CDS |
| TGTAGTGTACAATCAATTTA+AGG | 0.195996 | 6:+5290091 | None:intergenic |
| ATTGAAAGCATGGGTATTAA+TGG | 0.240309 | 6:-5292590 | MsG0680030560.01.T01:CDS |
| TATCACTCAAAATTATCTTT+TGG | 0.242168 | 6:+5290986 | None:intergenic |
| CTGCTGCATTGTATAGTTAT+TGG | 0.243774 | 6:-5291419 | MsG0680030560.01.T01:CDS |
| TCAGGAGCATATCGGCTTAT+AGG | 0.263631 | 6:-5292228 | MsG0680030560.01.T01:CDS |
| GTGACGATAATGGCGGTTTC+AGG | 0.270766 | 6:-5292246 | MsG0680030560.01.T01:CDS |
| TGAATTCTCTCACCTTGGTT+GGG | 0.293863 | 6:-5292158 | MsG0680030560.01.T01:CDS |
| GGGGCACTGGTTTGCGTTAA+GGG | 0.294933 | 6:-5292137 | MsG0680030560.01.T01:CDS |
| ACATGACAACAACTATATTT+AGG | 0.310116 | 6:-5290071 | MsG0680030560.01.T01:three_prime_UTR |
| CTGAATTCTCTCACCTTGGT+TGG | 0.313408 | 6:-5292159 | MsG0680030560.01.T01:CDS |
| TTCCTTATGGTCTCTTGGTT+TGG | 0.321151 | 6:-5290954 | MsG0680030560.01.T01:CDS |
| ATGTCGGCTTAACTTAGTTT+AGG | 0.324985 | 6:+5290596 | None:intergenic |
| ATGGCATCTGATCTAAATTC+AGG | 0.325194 | 6:-5292640 | MsG0680030560.01.T01:CDS |
| TTGGTTTGGTCCACAGGAAT+TGG | 0.330735 | 6:-5290940 | MsG0680030560.01.T01:CDS |
| GGTCTCTTGGTTTGGTCCAC+AGG | 0.336783 | 6:-5290946 | MsG0680030560.01.T01:CDS |
| ATTATTGGAGAAGGTGGTTA+TGG | 0.341276 | 6:-5292098 | MsG0680030560.01.T01:CDS |
| TCCGCGTCATCGCCGTGTTC+TGG | 0.349477 | 6:-5292187 | MsG0680030560.01.T01:CDS |
| ACAAAACATCATAGACAATA+AGG | 0.352469 | 6:+5290651 | None:intergenic |
| CTTCTGAAATAGATAGAATA+TGG | 0.354364 | 6:+5292461 | None:intergenic |
| ATTAATACAGTACCCTATCT+TGG | 0.376937 | 6:+5290537 | None:intergenic |
| GAATTCTCTCACCTTGGTTG+GGG | 0.380989 | 6:-5292157 | MsG0680030560.01.T01:CDS |
| TGAAGTTCCTTATGGTCTCT+TGG | 0.393992 | 6:-5290959 | MsG0680030560.01.T01:CDS |
| GCTTTGTTGCATACTGTTGA+AGG | 0.396273 | 6:+5291156 | None:intergenic |
| CACGGCGATGACGCGGATAT+AGG | 0.409649 | 6:+5292193 | None:intergenic |
| ATTATTGAGGAGTTTCTTAA+CGG | 0.412389 | 6:+5292034 | None:intergenic |
| CAACCAAGGTGAGAGAATTC+AGG | 0.412791 | 6:+5292160 | None:intergenic |
| TTAATATGCATTACTTTGAC+AGG | 0.417539 | 6:-5290519 | MsG0680030560.01.T01:three_prime_UTR |
| TTTGCACTTGGGGATTGTGC+TGG | 0.420564 | 6:-5290725 | MsG0680030560.01.T01:CDS |
| GATAGAACTGAAGTTCCTTA+TGG | 0.424426 | 6:-5290967 | MsG0680030560.01.T01:CDS |
| TCTCAGTCAGGTGACGATAA+TGG | 0.426193 | 6:-5292256 | MsG0680030560.01.T01:CDS |
| CTGCCTGAATTCTCTCACCT+TGG | 0.432420 | 6:-5292163 | MsG0680030560.01.T01:CDS |
| TGATACAGAATTGGTGTTGA+TGG | 0.434223 | 6:-5290779 | MsG0680030560.01.T01:intron |
| AAGGGTGGGATGCTTCCTCT+TGG | 0.435815 | 6:-5292484 | MsG0680030560.01.T01:CDS |
| CTGAATCTTCCAAGCTCTCC+AGG | 0.437706 | 6:-5290895 | MsG0680030560.01.T01:CDS |
| ATACTTTCATCCTTTGATGT+TGG | 0.444955 | 6:-5291179 | MsG0680030560.01.T01:CDS |
| GGAGATAATAGTAGTCAATC+AGG | 0.447697 | 6:-5292313 | MsG0680030560.01.T01:CDS |
| TACCTTCCACCTGGAGAGCT+TGG | 0.449786 | 6:+5290886 | None:intergenic |
| TTAATACAGTACCCTATCTT+GGG | 0.453844 | 6:+5290538 | None:intergenic |
| TTAACTTGTGGTGCAATAGC+AGG | 0.461916 | 6:-5290202 | MsG0680030560.01.T01:three_prime_UTR |
| TGGCGGTTTCAGGAGCATAT+CGG | 0.472695 | 6:-5292236 | MsG0680030560.01.T01:CDS |
| CCAATAATAATGTAAGTTCA+AGG | 0.474152 | 6:+5292113 | None:intergenic |
| GTTATTGGAGGTGGTCCTAC+AGG | 0.475532 | 6:-5291404 | MsG0680030560.01.T01:CDS |
| AGGCTAACCTTAGCTAAAGC+TGG | 0.479611 | 6:+5290671 | None:intergenic |
| GTATTAATGGTAATAGTGGT+TGG | 0.479981 | 6:-5292577 | MsG0680030560.01.T01:CDS |
| GCCACAAGGTTCCCGTTGAT+AGG | 0.484070 | 6:+5292056 | None:intergenic |
| GATCTGAATGGCTCTCAGTC+AGG | 0.486961 | 6:-5292268 | MsG0680030560.01.T01:CDS |
| GTGAAAGATGTCTTTGCACT+TGG | 0.487542 | 6:-5290737 | MsG0680030560.01.T01:CDS |
| TTAGCTAAAGCTGGAAGCAC+TGG | 0.493262 | 6:+5290680 | None:intergenic |
| ATGGGTATTAATGGTAATAG+TGG | 0.493469 | 6:-5292581 | MsG0680030560.01.T01:CDS |
| GACCAAACCAAGAGACCATA+AGG | 0.496146 | 6:+5290952 | None:intergenic |
| ATTGAGGTCAACCTATCAAC+GGG | 0.497094 | 6:-5292067 | MsG0680030560.01.T01:CDS |
| CTGCATTGTATAGTTATTGG+AGG | 0.503110 | 6:-5291416 | MsG0680030560.01.T01:CDS |
| ATGCATAGTACTACAGAAGT+AGG | 0.508315 | 6:-5290468 | MsG0680030560.01.T01:three_prime_UTR |
| TACATTATTATTGGAGAAGG+TGG | 0.508624 | 6:-5292104 | MsG0680030560.01.T01:CDS |
| TGGCATCTGATCTAAATTCA+GGG | 0.510805 | 6:-5292639 | MsG0680030560.01.T01:CDS |
| TGAAAGATGTCTTTGCACTT+GGG | 0.511531 | 6:-5290736 | MsG0680030560.01.T01:CDS |
| TAATAGCTTACAAATTATTG+AGG | 0.512738 | 6:+5292021 | None:intergenic |
| CATTGTATAGTTATTGGAGG+TGG | 0.518069 | 6:-5291413 | MsG0680030560.01.T01:CDS |
| CCTACAGGAGTGGAATTTAG+TGG | 0.520988 | 6:-5291389 | MsG0680030560.01.T01:CDS |
| CATTCATGTCACACTCATTG+AGG | 0.529894 | 6:-5291306 | MsG0680030560.01.T01:intron |
| AGGTCAAATTTCTTAACTTG+TGG | 0.530997 | 6:-5290214 | MsG0680030560.01.T01:three_prime_UTR |
| GGTTATGGAGTTGTCTATTG+AGG | 0.531389 | 6:-5292083 | MsG0680030560.01.T01:CDS |
| TCGAATAATCATCCGCAGAA+TGG | 0.533606 | 6:-5292406 | MsG0680030560.01.T01:CDS |
| GTTCATTATAATCATCCTTG+TGG | 0.534067 | 6:-5292551 | MsG0680030560.01.T01:CDS |
| TAGTGACGGCGATTCTCGAA+AGG | 0.537864 | 6:-5292356 | MsG0680030560.01.T01:CDS |
| CCACTAAATTCCACTCCTGT+AGG | 0.546000 | 6:+5291389 | None:intergenic |
| CTGTTGAAGGCCAACATCAA+AGG | 0.547269 | 6:+5291169 | None:intergenic |
| ACTTACATTATTATTGGAGA+AGG | 0.554262 | 6:-5292107 | MsG0680030560.01.T01:CDS |
| AAGTCTAGAAGAGGCAAGGG+TGG | 0.557328 | 6:-5292499 | MsG0680030560.01.T01:CDS |
| AATTCTCTCACCTTGGTTGG+GGG | 0.560095 | 6:-5292156 | MsG0680030560.01.T01:CDS |
| GAAAGATGTCTTTGCACTTG+GGG | 0.560397 | 6:-5290735 | MsG0680030560.01.T01:CDS |
| AAAGAAGTCTAGAAGAGGCA+AGG | 0.560414 | 6:-5292503 | MsG0680030560.01.T01:CDS |
| AGTGCTTCCAGCTTTAGCTA+AGG | 0.564009 | 6:-5290678 | MsG0680030560.01.T01:CDS |
| TTAAGAAAGAAGTCTAGAAG+AGG | 0.564848 | 6:-5292508 | MsG0680030560.01.T01:CDS |
| TTTCATCAGTTAATAGAACA+TGG | 0.566559 | 6:+5290357 | None:intergenic |
| ACCAGAACACGGCGATGACG+CGG | 0.568873 | 6:+5292186 | None:intergenic |
| ACAGAATTGGTGTTGATGGA+TGG | 0.570983 | 6:-5290775 | MsG0680030560.01.T01:intron |
| AAGAAGTCTAGAAGAGGCAA+GGG | 0.574521 | 6:-5292502 | MsG0680030560.01.T01:CDS |
| TTGAATGATAAGTTTAGTGA+CGG | 0.581977 | 6:-5292370 | MsG0680030560.01.T01:CDS |
| AGTCTAGAAGAGGCAAGGGT+GGG | 0.583662 | 6:-5292498 | MsG0680030560.01.T01:CDS |
| GGCTTCACATACCTTCCACC+TGG | 0.586382 | 6:+5290877 | None:intergenic |
| TTCCAAGCTCTCCAGGTGGA+AGG | 0.587295 | 6:-5290888 | MsG0680030560.01.T01:intron |
| AGGACAGTATAGATTAATGT+CGG | 0.589255 | 6:+5290580 | None:intergenic |
| ACGATAAATGAGTAAATCCA+AGG | 0.604447 | 6:+5290133 | None:intergenic |
| CGTTTAGAGAAAGATCTGAA+TGG | 0.607298 | 6:-5292280 | MsG0680030560.01.T01:CDS |
| TGCTGAAATACGCAAAACAT+CGG | 0.612649 | 6:-5290173 | MsG0680030560.01.T01:three_prime_UTR |
| TATTGAGGTCAACCTATCAA+CGG | 0.615709 | 6:-5292068 | MsG0680030560.01.T01:CDS |
| TATGCGAGGTGTTGTGAAGG+AGG | 0.618785 | 6:-5291016 | MsG0680030560.01.T01:CDS |
| TGTTGCATAGATATAACCTC+AGG | 0.619805 | 6:+5290278 | None:intergenic |
| TGGAGGTGGTCCTACAGGAG+TGG | 0.621881 | 6:-5291399 | MsG0680030560.01.T01:CDS |
| ATAATCAGTGACCAGTGCAT+AGG | 0.623638 | 6:+5290323 | None:intergenic |
| GGAGTTTCTTAACGGCCACA+AGG | 0.628154 | 6:+5292042 | None:intergenic |
| TCTTATGCGAGGTGTTGTGA+AGG | 0.628215 | 6:-5291019 | MsG0680030560.01.T01:CDS |
| TCTGGAGTTTGTCTTATGCG+AGG | 0.633554 | 6:-5291030 | MsG0680030560.01.T01:CDS |
| TGCAACAAAGCTCTTAACAA+AGG | 0.633654 | 6:-5291144 | MsG0680030560.01.T01:intron |
| ACCTATCAACGGGAACCTTG+TGG | 0.638382 | 6:-5292057 | MsG0680030560.01.T01:CDS |
| CTCAGAGGGACCAATTCCTG+TGG | 0.664860 | 6:+5290930 | None:intergenic |
| ATAGATAGAATATGGCCAAG+AGG | 0.665254 | 6:+5292469 | None:intergenic |
| CTCATAAAAGAACCATTCTG+CGG | 0.667999 | 6:+5292394 | None:intergenic |
| AATTCAGGCAGACCAGAACA+CGG | 0.683900 | 6:+5292175 | None:intergenic |
| CAGTCAGGTGACGATAATGG+CGG | 0.689927 | 6:-5292253 | MsG0680030560.01.T01:CDS |
| AATCTTCCAAGCTCTCCAGG+TGG | 0.690106 | 6:-5290892 | MsG0680030560.01.T01:CDS |
| GACATATTGATAGCACCACA+AGG | 0.695167 | 6:+5292536 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTCAAAACTAAAAAATAA+AGG | + | Chr6:5290688-5290707 | None:intergenic | 10.0% |
| !!! | AACATTTTTTATTTTAAATC+TGG | + | Chr6:5291807-5291826 | None:intergenic | 10.0% |
| !! | AATGTAAATTTGACTATTGA+AGG | + | Chr6:5290948-5290967 | None:intergenic | 20.0% |
| !! | AATGTATGATATTGACAAAT+AGG | + | Chr6:5290770-5290789 | None:intergenic | 20.0% |
| !! | GAAAAAATTGACACATATAA+GGG | + | Chr6:5290975-5290994 | None:intergenic | 20.0% |
| !! | TAATAGCTTACAAATTATTG+AGG | + | Chr6:5290642-5290661 | None:intergenic | 20.0% |
| !! | TGAAAAAATTGACACATATA+AGG | + | Chr6:5290976-5290995 | None:intergenic | 20.0% |
| !! | TGCTAAAAAAAAAAAGAACA+TGG | + | Chr6:5292274-5292293 | None:intergenic | 20.0% |
| !! | TTATGAAAAGTTAAACACAA+TGG | + | Chr6:5291448-5291467 | None:intergenic | 20.0% |
| !!! | ATCACTCAAAATTATCTTTT+GGG | + | Chr6:5291676-5291695 | None:intergenic | 20.0% |
| !!! | GATTTTTTACATTGGATTAA+AGG | + | Chr6:5292103-5292122 | None:intergenic | 20.0% |
| !!! | GTCATAAACTATTTGTTTTT+TGG | + | Chr6:5290818-5290837 | None:intergenic | 20.0% |
| !!! | GTGTTTAACTTTTCATAATT+AGG | - | Chr6:5291450-5291469 | MsG0680030560.01.T01:intron | 20.0% |
| !!! | TAATGAACCAAGTTTTATAA+CGG | - | Chr6:5290706-5290725 | MsG0680030560.01.T01:CDS | 20.0% |
| !!! | TATCACTCAAAATTATCTTT+TGG | + | Chr6:5291677-5291696 | None:intergenic | 20.0% |
| !!! | TATGACAAGTTTTAAATTGA+AGG | - | Chr6:5290832-5290851 | MsG0680030560.01.T01:intron | 20.0% |
| !!! | TCAAAGAAAACAAATGTTTT+TGG | - | Chr6:5290047-5290066 | MsG0680030560.01.T01:three_prime_UTR | 20.0% |
| ! | AATGTAAAAAATCCCAAGAT+AGG | - | Chr6:5292110-5292129 | MsG0680030560.01.T01:CDS | 25.0% |
| ! | ACAAAACATCATAGACAATA+AGG | + | Chr6:5292012-5292031 | None:intergenic | 25.0% |
| ! | ACATGACAACAACTATATTT+AGG | - | Chr6:5292589-5292608 | MsG0680030560.01.T01:CDS | 25.0% |
| ! | ACTTACATTATTATTGGAGA+AGG | - | Chr6:5290553-5290572 | MsG0680030560.01.T01:three_prime_UTR | 25.0% |
| ! | AGCTTCTATTTCATTCTATT+TGG | - | Chr6:5292219-5292238 | MsG0680030560.01.T01:CDS | 25.0% |
| ! | ATATACGATCAAAACTCAAA+AGG | + | Chr6:5291546-5291565 | None:intergenic | 25.0% |
| ! | ATGTAAAAAATCCCAAGATA+GGG | - | Chr6:5292111-5292130 | MsG0680030560.01.T01:CDS | 25.0% |
| ! | ATTATTGAGGAGTTTCTTAA+CGG | + | Chr6:5290629-5290648 | None:intergenic | 25.0% |
| ! | CCAATAATAATGTAAGTTCA+AGG | + | Chr6:5290550-5290569 | None:intergenic | 25.0% |
| ! | CCTTGAACTTACATTATTAT+TGG | - | Chr6:5290547-5290566 | MsG0680030560.01.T01:three_prime_UTR | 25.0% |
| ! | CGAAACTAAAAAATTTACCT+TGG | - | Chr6:5292510-5292529 | MsG0680030560.01.T01:CDS | 25.0% |
| ! | GCTTAAAACTAAACTAAGTA+TGG | + | Chr6:5291117-5291136 | None:intergenic | 25.0% |
| ! | TATATAGCACGATCAATAAT+AGG | + | Chr6:5290925-5290944 | None:intergenic | 25.0% |
| ! | TGTAGTGTACAATCAATTTA+AGG | + | Chr6:5292572-5292591 | None:intergenic | 25.0% |
| ! | TTAATATGCATTACTTTGAC+AGG | - | Chr6:5292141-5292160 | MsG0680030560.01.T01:CDS | 25.0% |
| ! | TTGAATGATAAGTTTAGTGA+CGG | - | Chr6:5290290-5290309 | MsG0680030560.01.T01:three_prime_UTR | 25.0% |
| ! | TTTCATCAGTTAATAGAACA+TGG | + | Chr6:5292306-5292325 | None:intergenic | 25.0% |
| !! | AAAACGTTTTTCATTATGAC+AGG | - | Chr6:5291193-5291212 | MsG0680030560.01.T01:intron | 25.0% |
| !! | ATTCAATTTTTGTATCAGTC+TGG | - | Chr6:5291612-5291631 | MsG0680030560.01.T01:intron | 25.0% |
| !! | TCACTCAAAATTATCTTTTG+GGG | + | Chr6:5291675-5291694 | None:intergenic | 25.0% |
| !!! | ATTAGTCTTATAGAATCATG+GGG | - | Chr6:5290888-5290907 | MsG0680030560.01.T01:intron | 25.0% |
| !!! | CATTAGTCTTATAGAATCAT+GGG | - | Chr6:5290887-5290906 | MsG0680030560.01.T01:intron | 25.0% |
| !!! | CTTCTGAAATAGATAGAATA+TGG | + | Chr6:5290202-5290221 | None:intergenic | 25.0% |
| !!! | GTTTTGATTCAAACAAAGAA+TGG | - | Chr6:5290326-5290345 | MsG0680030560.01.T01:three_prime_UTR | 25.0% |
| !!! | TATCTTGGGATTTTTTACAT+TGG | + | Chr6:5292111-5292130 | None:intergenic | 25.0% |
| AATCACACCGTTATAAAACT+TGG | + | Chr6:5290716-5290735 | None:intergenic | 30.0% | |
| ACGATAAATGAGTAAATCCA+AGG | + | Chr6:5292530-5292549 | None:intergenic | 30.0% | |
| AGGACAGTATAGATTAATGT+CGG | + | Chr6:5292083-5292102 | None:intergenic | 30.0% | |
| ATACTTTCATCCTTTGATGT+TGG | - | Chr6:5291481-5291500 | MsG0680030560.01.T01:intron | 30.0% | |
| ATGGGTATTAATGGTAATAG+TGG | - | Chr6:5290079-5290098 | MsG0680030560.01.T01:three_prime_UTR | 30.0% | |
| ATTAATACAGTACCCTATCT+TGG | + | Chr6:5292126-5292145 | None:intergenic | 30.0% | |
| CCATGATTCTATAAGACTAA+TGG | + | Chr6:5290889-5290908 | None:intergenic | 30.0% | |
| CTTTGTATGCATCAAATGAT+TGG | - | Chr6:5291076-5291095 | MsG0680030560.01.T01:intron | 30.0% | |
| GTATTAATGGTAATAGTGGT+TGG | - | Chr6:5290083-5290102 | MsG0680030560.01.T01:three_prime_UTR | 30.0% | |
| GTTCATTATAATCATCCTTG+TGG | - | Chr6:5290109-5290128 | MsG0680030560.01.T01:three_prime_UTR | 30.0% | |
| GTTGTTGAATGATACAGAAT+TGG | - | Chr6:5291872-5291891 | MsG0680030560.01.T01:intron | 30.0% | |
| TACATTATTATTGGAGAAGG+TGG | - | Chr6:5290556-5290575 | MsG0680030560.01.T01:three_prime_UTR | 30.0% | |
| TATAGAATCATGGGGATATA+AGG | - | Chr6:5290896-5290915 | MsG0680030560.01.T01:CDS | 30.0% | |
| TTAAGAAAGAAGTCTAGAAG+AGG | - | Chr6:5290152-5290171 | MsG0680030560.01.T01:three_prime_UTR | 30.0% | |
| TTAATACAGTACCCTATCTT+GGG | + | Chr6:5292125-5292144 | None:intergenic | 30.0% | |
| TTGATGCATACAAAGATCTT+TGG | + | Chr6:5291071-5291090 | None:intergenic | 30.0% | |
| ! | AGGTCAAATTTCTTAACTTG+TGG | - | Chr6:5292446-5292465 | MsG0680030560.01.T01:CDS | 30.0% |
| ! | ATTGAAAGCATGGGTATTAA+TGG | - | Chr6:5290070-5290089 | MsG0680030560.01.T01:three_prime_UTR | 30.0% |
| ! | TGATGTTTTGTCAGTACATA+TGG | - | Chr6:5292021-5292040 | MsG0680030560.01.T01:intron | 30.0% |
| !! | CCATTAGTCTTATAGAATCA+TGG | - | Chr6:5290886-5290905 | MsG0680030560.01.T01:intron | 30.0% |
| !!! | AGTTTTTTGACAAACTCAGA+GGG | + | Chr6:5291747-5291766 | None:intergenic | 30.0% |
| !!! | ATGTTTTTGGATTGAAAGCA+TGG | - | Chr6:5290060-5290079 | MsG0680030560.01.T01:three_prime_UTR | 30.0% |
| !!! | TGTTTTTGGATTGAAAGCAT+GGG | - | Chr6:5290061-5290080 | MsG0680030560.01.T01:three_prime_UTR | 30.0% |
| AGGCTGCAATGAAACTATTA+AGG | + | Chr6:5290668-5290687 | None:intergenic | 35.0% | |
| ATAGATAGAATATGGCCAAG+AGG | + | Chr6:5290194-5290213 | None:intergenic | 35.0% | |
| ATGCATAGTACTACAGAAGT+AGG | - | Chr6:5292192-5292211 | MsG0680030560.01.T01:CDS | 35.0% | |
| ATGGCATCTGATCTAAATTC+AGG | - | Chr6:5290020-5290039 | MsG0680030560.01.T01:three_prime_UTR | 35.0% | |
| ATTATTGGAGAAGGTGGTTA+TGG | - | Chr6:5290562-5290581 | MsG0680030560.01.T01:three_prime_UTR | 35.0% | |
| CATTGTATAGTTATTGGAGG+TGG | - | Chr6:5291247-5291266 | MsG0680030560.01.T01:intron | 35.0% | |
| CGTTTAGAGAAAGATCTGAA+TGG | - | Chr6:5290380-5290399 | MsG0680030560.01.T01:three_prime_UTR | 35.0% | |
| CTCATAAAAGAACCATTCTG+CGG | + | Chr6:5290269-5290288 | None:intergenic | 35.0% | |
| CTGCATTGTATAGTTATTGG+AGG | - | Chr6:5291244-5291263 | MsG0680030560.01.T01:intron | 35.0% | |
| CTGCTGCATTGTATAGTTAT+TGG | - | Chr6:5291241-5291260 | MsG0680030560.01.T01:intron | 35.0% | |
| GATAGAACTGAAGTTCCTTA+TGG | - | Chr6:5291693-5291712 | MsG0680030560.01.T01:intron | 35.0% | |
| GGAGATAATAGTAGTCAATC+AGG | - | Chr6:5290347-5290366 | MsG0680030560.01.T01:three_prime_UTR | 35.0% | |
| TATTGAGGTCAACCTATCAA+CGG | - | Chr6:5290592-5290611 | MsG0680030560.01.T01:exon | 35.0% | |
| TCATCAATCTTGTGCACTAT+AGG | - | Chr6:5290993-5291012 | MsG0680030560.01.T01:CDS | 35.0% | |
| TGAAAGATGTCTTTGCACTT+GGG | - | Chr6:5291924-5291943 | MsG0680030560.01.T01:intron | 35.0% | |
| TGCAACAAAGCTCTTAACAA+AGG | - | Chr6:5291516-5291535 | MsG0680030560.01.T01:intron | 35.0% | |
| TGCTGAAATACGCAAAACAT+CGG | - | Chr6:5292487-5292506 | MsG0680030560.01.T01:CDS | 35.0% | |
| TGGCATCTGATCTAAATTCA+GGG | - | Chr6:5290021-5290040 | MsG0680030560.01.T01:three_prime_UTR | 35.0% | |
| TGTTGCATAGATATAACCTC+AGG | + | Chr6:5292385-5292404 | None:intergenic | 35.0% | |
| ! | AAACGTTTTCAGCTTAGCTT+TGG | + | Chr6:5291182-5291201 | None:intergenic | 35.0% |
| ! | ACTATGTTTGTTGCAGCAAA+AGG | - | Chr6:5290790-5290809 | MsG0680030560.01.T01:intron | 35.0% |
| ! | AGTATACTTTTCCTATGCAC+TGG | - | Chr6:5292326-5292345 | MsG0680030560.01.T01:CDS | 35.0% |
| ! | GTTTTCTTGAACAAACTGGA+AGG | - | Chr6:5291957-5291976 | MsG0680030560.01.T01:intron | 35.0% |
| ! | TTCTTAGTCACTCATTTTGC+AGG | - | Chr6:5292426-5292445 | MsG0680030560.01.T01:CDS | 35.0% |
| !! | ATGTCGGCTTAACTTAGTTT+AGG | + | Chr6:5292067-5292086 | None:intergenic | 35.0% |
| !! | TGATACAGAATTGGTGTTGA+TGG | - | Chr6:5291881-5291900 | MsG0680030560.01.T01:intron | 35.0% |
| !!! | CAGTTTTTTGACAAACTCAG+AGG | + | Chr6:5291748-5291767 | None:intergenic | 35.0% |
| !!! | TTTTTTGTTTGCATTGCCTG+AGG | - | Chr6:5292366-5292385 | MsG0680030560.01.T01:CDS | 35.0% |
| AAAGAAGTCTAGAAGAGGCA+AGG | - | Chr6:5290157-5290176 | MsG0680030560.01.T01:three_prime_UTR | 40.0% | |
| AAGAAGTCTAGAAGAGGCAA+GGG | - | Chr6:5290158-5290177 | MsG0680030560.01.T01:three_prime_UTR | 40.0% | |
| ACTTGACAGCTCATCATTGA+AGG | + | Chr6:5291573-5291592 | None:intergenic | 40.0% | |
| ATAATCAGTGACCAGTGCAT+AGG | + | Chr6:5292340-5292359 | None:intergenic | 40.0% | |
| ATTGAGGTCAACCTATCAAC+GGG | - | Chr6:5290593-5290612 | MsG0680030560.01.T01:exon | 40.0% | |
| CAATCTTGTGCACTATAGGT+TGG | - | Chr6:5290997-5291016 | MsG0680030560.01.T01:CDS | 40.0% | |
| CATTCATGTCACACTCATTG+AGG | - | Chr6:5291354-5291373 | MsG0680030560.01.T01:CDS | 40.0% | |
| GAAAGATGTCTTTGCACTTG+GGG | - | Chr6:5291925-5291944 | MsG0680030560.01.T01:intron | 40.0% | |
| GGTTATGGAGTTGTCTATTG+AGG | - | Chr6:5290577-5290596 | MsG0680030560.01.T01:three_prime_UTR | 40.0% | |
| GTGAAAGATGTCTTTGCACT+TGG | - | Chr6:5291923-5291942 | MsG0680030560.01.T01:intron | 40.0% | |
| TCGAATAATCATCCGCAGAA+TGG | - | Chr6:5290254-5290273 | MsG0680030560.01.T01:three_prime_UTR | 40.0% | |
| TGAAGTTCCTTATGGTCTCT+TGG | - | Chr6:5291701-5291720 | MsG0680030560.01.T01:intron | 40.0% | |
| TGAATTCTCTCACCTTGGTT+GGG | - | Chr6:5290502-5290521 | MsG0680030560.01.T01:three_prime_UTR | 40.0% | |
| TTCCTTATGGTCTCTTGGTT+TGG | - | Chr6:5291706-5291725 | MsG0680030560.01.T01:intron | 40.0% | |
| ! | GAAGTCTATTTTGTGTGCTG+AGG | - | Chr6:5291394-5291413 | MsG0680030560.01.T01:CDS | 40.0% |
| ! | GACATATTGATAGCACCACA+AGG | + | Chr6:5290127-5290146 | None:intergenic | 40.0% |
| ! | GATGTTTTGCGTATTTCAGC+AGG | + | Chr6:5292488-5292507 | None:intergenic | 40.0% |
| ! | GCACTATAGGTTGGATTACT+TGG | - | Chr6:5291006-5291025 | MsG0680030560.01.T01:CDS | 40.0% |
| ! | GCTTTGTTGCATACTGTTGA+AGG | + | Chr6:5291507-5291526 | None:intergenic | 40.0% |
| !! | ACAGAATTGGTGTTGATGGA+TGG | - | Chr6:5291885-5291904 | MsG0680030560.01.T01:intron | 40.0% |
| !! | TTAACTTGTGGTGCAATAGC+AGG | - | Chr6:5292458-5292477 | MsG0680030560.01.T01:CDS | 40.0% |
| !! | TTCCTGTTTCTAGAGCATCA+TGG | - | Chr6:5290735-5290754 | MsG0680030560.01.T01:CDS | 40.0% |
| !!! | GCTGGTTTTCTTGAACAAAC+TGG | - | Chr6:5291953-5291972 | MsG0680030560.01.T01:intron | 40.0% |
| AATTCAGGCAGACCAGAACA+CGG | + | Chr6:5290488-5290507 | None:intergenic | 45.0% | |
| AATTCTCTCACCTTGGTTGG+GGG | - | Chr6:5290504-5290523 | MsG0680030560.01.T01:three_prime_UTR | 45.0% | |
| AGGCTAACCTTAGCTAAAGC+TGG | + | Chr6:5291992-5292011 | None:intergenic | 45.0% | |
| CAACCAAGGTGAGAGAATTC+AGG | + | Chr6:5290503-5290522 | None:intergenic | 45.0% | |
| CCACTAAATTCCACTCCTGT+AGG | + | Chr6:5291274-5291293 | None:intergenic | 45.0% | |
| CCTACAGGAGTGGAATTTAG+TGG | - | Chr6:5291271-5291290 | MsG0680030560.01.T01:intron | 45.0% | |
| CTGAATTCTCTCACCTTGGT+TGG | - | Chr6:5290501-5290520 | MsG0680030560.01.T01:three_prime_UTR | 45.0% | |
| CTGTTGAAGGCCAACATCAA+AGG | + | Chr6:5291494-5291513 | None:intergenic | 45.0% | |
| GAATTCTCTCACCTTGGTTG+GGG | - | Chr6:5290503-5290522 | MsG0680030560.01.T01:three_prime_UTR | 45.0% | |
| GACCAAACCAAGAGACCATA+AGG | + | Chr6:5291711-5291730 | None:intergenic | 45.0% | |
| TCTCAGTCAGGTGACGATAA+TGG | - | Chr6:5290404-5290423 | MsG0680030560.01.T01:three_prime_UTR | 45.0% | |
| TGACAGCTCATCATTGAAGG+TGG | + | Chr6:5291570-5291589 | None:intergenic | 45.0% | |
| ! | AGTGCTTCCAGCTTTAGCTA+AGG | - | Chr6:5291982-5292001 | MsG0680030560.01.T01:intron | 45.0% |
| ! | TCTGGAGTTTGTCTTATGCG+AGG | - | Chr6:5291630-5291649 | MsG0680030560.01.T01:intron | 45.0% |
| ! | TTAGCTAAAGCTGGAAGCAC+TGG | + | Chr6:5291983-5292002 | None:intergenic | 45.0% |
| !! | CACCATGATGCTCTAGAAAC+AGG | + | Chr6:5290740-5290759 | None:intergenic | 45.0% |
| !! | TCAGGAGCATATCGGCTTAT+AGG | - | Chr6:5290432-5290451 | MsG0680030560.01.T01:three_prime_UTR | 45.0% |
| !! | TCTTATGCGAGGTGTTGTGA+AGG | - | Chr6:5291641-5291660 | MsG0680030560.01.T01:intron | 45.0% |
| !! | TTGGTTTGGTCCACAGGAAT+TGG | - | Chr6:5291720-5291739 | MsG0680030560.01.T01:intron | 45.0% |
| AAGTCTAGAAGAGGCAAGGG+TGG | - | Chr6:5290161-5290180 | MsG0680030560.01.T01:three_prime_UTR | 50.0% | |
| AATCTTCCAAGCTCTCCAGG+TGG | - | Chr6:5291768-5291787 | MsG0680030560.01.T01:intron | 50.0% | |
| ACCTATCAACGGGAACCTTG+TGG | - | Chr6:5290603-5290622 | MsG0680030560.01.T01:exon | 50.0% | |
| AGTCTAGAAGAGGCAAGGGT+GGG | - | Chr6:5290162-5290181 | MsG0680030560.01.T01:three_prime_UTR | 50.0% | |
| CTGAATCTTCCAAGCTCTCC+AGG | - | Chr6:5291765-5291784 | MsG0680030560.01.T01:intron | 50.0% | |
| CTGCCTGAATTCTCTCACCT+TGG | - | Chr6:5290497-5290516 | MsG0680030560.01.T01:three_prime_UTR | 50.0% | |
| GATCTGAATGGCTCTCAGTC+AGG | - | Chr6:5290392-5290411 | MsG0680030560.01.T01:three_prime_UTR | 50.0% | |
| GGAGTTTCTTAACGGCCACA+AGG | + | Chr6:5290621-5290640 | None:intergenic | 50.0% | |
| GTTATTGGAGGTGGTCCTAC+AGG | - | Chr6:5291256-5291275 | MsG0680030560.01.T01:intron | 50.0% | |
| TAGTGACGGCGATTCTCGAA+AGG | - | Chr6:5290304-5290323 | MsG0680030560.01.T01:three_prime_UTR | 50.0% | |
| TTTGCACTTGGGGATTGTGC+TGG | - | Chr6:5291935-5291954 | MsG0680030560.01.T01:intron | 50.0% | |
| ! | CAGTCAGGTGACGATAATGG+CGG | - | Chr6:5290407-5290426 | MsG0680030560.01.T01:three_prime_UTR | 50.0% |
| ! | GTGACGATAATGGCGGTTTC+AGG | - | Chr6:5290414-5290433 | MsG0680030560.01.T01:three_prime_UTR | 50.0% |
| ! | TGGCGGTTTCAGGAGCATAT+CGG | - | Chr6:5290424-5290443 | MsG0680030560.01.T01:three_prime_UTR | 50.0% |
| !! | TATGCGAGGTGTTGTGAAGG+AGG | - | Chr6:5291644-5291663 | MsG0680030560.01.T01:intron | 50.0% |
| AAGGGTGGGATGCTTCCTCT+TGG | - | Chr6:5290176-5290195 | MsG0680030560.01.T01:three_prime_UTR | 55.0% | |
| CTCAGAGGGACCAATTCCTG+TGG | + | Chr6:5291733-5291752 | None:intergenic | 55.0% | |
| GCCACAAGGTTCCCGTTGAT+AGG | + | Chr6:5290607-5290626 | None:intergenic | 55.0% | |
| GGCTTCACATACCTTCCACC+TGG | + | Chr6:5291786-5291805 | None:intergenic | 55.0% | |
| TACCTTCCACCTGGAGAGCT+TGG | + | Chr6:5291777-5291796 | None:intergenic | 55.0% | |
| TTCCAAGCTCTCCAGGTGGA+AGG | - | Chr6:5291772-5291791 | MsG0680030560.01.T01:intron | 55.0% | |
| !! | GGGGCACTGGTTTGCGTTAA+GGG | - | Chr6:5290523-5290542 | MsG0680030560.01.T01:three_prime_UTR | 55.0% |
| !! | GGTCTCTTGGTTTGGTCCAC+AGG | - | Chr6:5291714-5291733 | MsG0680030560.01.T01:intron | 55.0% |
| ACCAGAACACGGCGATGACG+CGG | + | Chr6:5290477-5290496 | None:intergenic | 60.0% | |
| CAAACCAGTGCCCCCAACCA+AGG | + | Chr6:5290517-5290536 | None:intergenic | 60.0% | |
| CACGGCGATGACGCGGATAT+AGG | + | Chr6:5290470-5290489 | None:intergenic | 60.0% | |
| TGGAGGTGGTCCTACAGGAG+TGG | - | Chr6:5291261-5291280 | MsG0680030560.01.T01:intron | 60.0% | |
| !! | GGGGGCACTGGTTTGCGTTA+AGG | - | Chr6:5290522-5290541 | MsG0680030560.01.T01:three_prime_UTR | 60.0% |
| TCCGCGTCATCGCCGTGTTC+TGG | - | Chr6:5290473-5290492 | MsG0680030560.01.T01:three_prime_UTR | 65.0% | |
| ! | CTCACCTTGGTTGGGGGCAC+TGG | - | Chr6:5290510-5290529 | MsG0680030560.01.T01:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 5290020 | 5292662 | 5290020 | ID=MsG0680030560.01;Name=MsG0680030560.01 |
| Chr6 | mRNA | 5290020 | 5292662 | 5290020 | ID=MsG0680030560.01.T01;Parent=MsG0680030560.01;Name=MsG0680030560.01.T01;_AED=0.27;_eAED=0.27;_QI=0|1|1|1|0.5|0.44|9|584|403 |
| Chr6 | exon | 5290020 | 5290793 | 5290020 | ID=MsG0680030560.01.T01:exon:4368;Parent=MsG0680030560.01.T01 |
| Chr6 | exon | 5290889 | 5291052 | 5290889 | ID=MsG0680030560.01.T01:exon:4367;Parent=MsG0680030560.01.T01 |
| Chr6 | exon | 5291145 | 5291210 | 5291145 | ID=MsG0680030560.01.T01:exon:4366;Parent=MsG0680030560.01.T01 |
| Chr6 | exon | 5291307 | 5291467 | 5291307 | ID=MsG0680030560.01.T01:exon:4365;Parent=MsG0680030560.01.T01 |
| Chr6 | exon | 5292032 | 5292662 | 5292032 | ID=MsG0680030560.01.T01:exon:4364;Parent=MsG0680030560.01.T01 |
| Chr6 | CDS | 5292032 | 5292662 | 5292032 | ID=MsG0680030560.01.T01:cds;Parent=MsG0680030560.01.T01 |
| Chr6 | CDS | 5291307 | 5291467 | 5291307 | ID=MsG0680030560.01.T01:cds;Parent=MsG0680030560.01.T01 |
| Chr6 | CDS | 5291145 | 5291210 | 5291145 | ID=MsG0680030560.01.T01:cds;Parent=MsG0680030560.01.T01 |
| Chr6 | CDS | 5290889 | 5291052 | 5290889 | ID=MsG0680030560.01.T01:cds;Parent=MsG0680030560.01.T01 |
| Chr6 | CDS | 5290604 | 5290793 | 5290604 | ID=MsG0680030560.01.T01:cds;Parent=MsG0680030560.01.T01 |
| Chr6 | three_prime_UTR | 5290020 | 5290603 | 5290020 | ID=MsG0680030560.01.T01:three_prime_utr;Parent=MsG0680030560.01.T01 |
| Gene Sequence |
| Protein sequence |
