AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017349.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017349.01.T01 MTR_4g006760 91.071 56 5 0 80 135 288 343 4.29e-24 102
MsG0380017349.01.T01 MTR_4g131350 91.071 56 5 0 80 135 343 398 6.20e-24 101
MsG0380017349.01.T01 MTR_4g125920 91.071 56 5 0 80 135 290 345 8.14e-24 101
MsG0380017349.01.T01 MTR_4g131310 92.593 54 4 0 82 135 274 327 1.08e-23 100
MsG0380017349.01.T01 MTR_4g087040 75.385 65 16 0 29 93 2312 2376 3.61e-23 99.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017349.01.T01 AT1G80790 37.008 127 67 3 39 155 247 370 4.69e-13 69.3
MsG0380017349.01.T01 AT1G80790 37.008 127 67 3 39 155 247 370 6.62e-13 68.9
MsG0380017349.01.T01 AT1G80790 37.008 127 67 3 39 155 247 370 6.62e-13 68.9

Find 82 sgRNAs with CRISPR-Local

Find 308 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAGAACCTGTATGTGATTT+TGG 0.118590 3:-95252323 None:intergenic
TTTAGAAGCAAAGGAAATTA+AGG 0.221632 3:+95251476 MsG0380017349.01.T01:five_prime_UTR
TTACTTTATGAATAAGTTTC+CGG 0.228149 3:-95256073 None:intergenic
TCACCAAGACATTCTGAAAT+TGG 0.236068 3:+95255366 MsG0380017349.01.T01:CDS
AATTAAGCTTTCTTTGAATA+AGG 0.238635 3:-95251615 None:intergenic
AATACCTTTGTGCAGGATTA+TGG 0.243323 3:+95255984 MsG0380017349.01.T01:intron
AGAAAGCTTAATTGAAAGTA+TGG 0.246651 3:+95251625 MsG0380017349.01.T01:CDS
TTAATACCTCACGCTTATTT+AGG 0.249515 3:-95252819 None:intergenic
TTGCCCTTCTGAGGGCATTT+TGG 0.265307 3:+95251271 MsG0380017349.01.T01:five_prime_UTR
TACAGGCAAACTTTGCTCTT+AGG 0.274935 3:-95256048 None:intergenic
CAGCTTACCATTTGTGATAT+CGG 0.286563 3:-95255499 None:intergenic
AGAGGAGAGCAACTCTAATT+TGG 0.306680 3:+95256008 MsG0380017349.01.T01:CDS
TGAAACCTGTTGATTTCAAC+TGG 0.321629 3:-95255133 None:intergenic
TTAAAGCTGAGCCATTAAAA+TGG 0.324266 3:+95251102 None:intergenic
ATTTCCTTTGCTTCTAAAAT+CGG 0.330480 3:-95251471 None:intergenic
GAGGAAGAAACAAGAAGAAT+TGG 0.332205 3:+95251666 MsG0380017349.01.T01:CDS
TGACTTCTACTAAACCAAAT+AGG 0.346842 3:+95251220 MsG0380017349.01.T01:five_prime_UTR
GGGAACGGGAGAGGAAGAAG+GGG 0.366169 3:+95251372 MsG0380017349.01.T01:five_prime_UTR
ACAGGCAAACTTTGCTCTTA+GGG 0.372642 3:-95256047 None:intergenic
ATGCCCTCAGAAGGGCAAAA+TGG 0.385273 3:-95251266 None:intergenic
TGAGGAGGTACGAAGTATAT+TGG 0.387120 3:+95252729 MsG0380017349.01.T01:CDS
GCTTCCCAGTTGAAATCAAC+AGG 0.402292 3:+95255128 MsG0380017349.01.T01:CDS
GCTTCTGCCCCTCTCAGAAT+AGG 0.408261 3:-95255191 None:intergenic
GTAATCGCAATTCAGAACTA+TGG 0.424305 3:+95256231 MsG0380017349.01.T01:three_prime_UTR
CTTATTTAGGTCTCTGCTCC+AGG 0.431017 3:-95252806 None:intergenic
AGAGCTAAATTTGAATGCTA+AGG 0.432495 3:+95252487 MsG0380017349.01.T01:CDS
ACGGGAACGGGAGAGGAAGA+AGG 0.445089 3:+95251370 MsG0380017349.01.T01:five_prime_UTR
CGGGAACGGGAGAGGAAGAA+GGG 0.445194 3:+95251371 MsG0380017349.01.T01:five_prime_UTR
ATAGTTCTGAATTGCGATTA+CGG 0.448652 3:-95256229 None:intergenic
TGAATAAGTTTCCGGCATAC+AGG 0.450992 3:-95256065 None:intergenic
GGGACGAGAGAAACGGGAAC+GGG 0.454643 3:+95251358 MsG0380017349.01.T01:five_prime_UTR
GGGGTTGGGTTTGCAATTGG+AGG 0.457079 3:+95251647 MsG0380017349.01.T01:CDS
AAATTTGAATGCTAAGGAAC+AGG 0.469593 3:+95252493 MsG0380017349.01.T01:CDS
TGACTTAACATGAGAATTGA+CGG 0.469951 3:-95255397 None:intergenic
GAAAGCTTAATTGAAAGTAT+GGG 0.474338 3:+95251626 MsG0380017349.01.T01:CDS
AGAGAAGTTGAGTAATGAGT+TGG 0.478671 3:+95252759 MsG0380017349.01.T01:CDS
GAGAGAAACGGGAACGGGAG+AGG 0.478946 3:+95251363 MsG0380017349.01.T01:five_prime_UTR
GAAGAAACAAGAAGAATTGG+AGG 0.484939 3:+95251669 MsG0380017349.01.T01:CDS
GAACAGAACGGAAGAGGAGA+GGG 0.490833 3:+95251406 MsG0380017349.01.T01:five_prime_UTR
CTGAGAGGGGCAGAAGCAAA+TGG 0.493613 3:+95255197 MsG0380017349.01.T01:CDS
CGTTTAGCCGATATCACAAA+TGG 0.498544 3:+95255492 MsG0380017349.01.T01:CDS
GCCAGGACTTATTCTTGCAT+CGG 0.503108 3:+95255287 MsG0380017349.01.T01:intron
GGAACGGGAGAGGAAGAAGG+GGG 0.511967 3:+95251373 MsG0380017349.01.T01:five_prime_UTR
AGCAAAGTTTGCCTGTATGC+CGG 0.512633 3:+95256054 MsG0380017349.01.T01:CDS
ATCGGTGCAGATCGGAGTGT+TGG 0.520474 3:-95251453 None:intergenic
TTTGTGCAGGATTATGGAAG+AGG 0.521606 3:+95255990 MsG0380017349.01.T01:intron
AAAGCTTAATTGAAAGTATG+GGG 0.524628 3:+95251627 MsG0380017349.01.T01:CDS
AGAAGTCCAAAATCACATAC+AGG 0.532109 3:+95252317 MsG0380017349.01.T01:CDS
TAGCCAATTTCAGAATGTCT+TGG 0.532340 3:-95255369 None:intergenic
GGGGACGAGAGAAACGGGAA+CGG 0.541738 3:+95251357 MsG0380017349.01.T01:five_prime_UTR
AGACATTCTGAAATTGGCTA+TGG 0.542606 3:+95255372 MsG0380017349.01.T01:CDS
AATTTGACTTTCAAGATGAG+TGG 0.544658 3:+95255340 MsG0380017349.01.T01:CDS
ACTAGAAGAGGACAAGAAGA+AGG 0.546755 3:+95252861 MsG0380017349.01.T01:CDS
AAATGCGGAAGCTTGATACC+TGG 0.551489 3:+95252788 MsG0380017349.01.T01:CDS
TTTACCAAAATGCCCTCAGA+AGG 0.554304 3:-95251275 None:intergenic
GAGGCAAAATACATCCAATA+CGG 0.558155 3:-95256179 None:intergenic
GGATACTGATCAATTTGTGA+TGG 0.561435 3:+95255106 MsG0380017349.01.T01:intron
AATATGCAGATTGATGTATG+AGG 0.564393 3:+95256279 MsG0380017349.01.T01:three_prime_UTR
TAATTGTATGCAATGTCACT+AGG 0.570299 3:+95256206 MsG0380017349.01.T01:three_prime_UTR
TATCAGAGCCTATTCTGAGA+GGG 0.573293 3:+95255183 MsG0380017349.01.T01:CDS
CTTCTAAAATCGGTGCAGAT+CGG 0.575050 3:-95251461 None:intergenic
CGAGCACATCAGTTGATCAA+AGG 0.580828 3:+95255439 MsG0380017349.01.T01:CDS
AGAACAGAACGGAAGAGGAG+AGG 0.587141 3:+95251405 MsG0380017349.01.T01:five_prime_UTR
CAGGCAAACTTTGCTCTTAG+GGG 0.589620 3:-95256046 None:intergenic
GCAAACTTTGCTCTTAGGGG+TGG 0.606726 3:-95256043 None:intergenic
TATAGCAGGAAAAGATGCAG+AGG 0.611609 3:+95252353 MsG0380017349.01.T01:CDS
AATAGGAAAATCAATGTCCG+TGG 0.613974 3:+95251237 MsG0380017349.01.T01:five_prime_UTR
TATAGGTCTCTAAAACTGCA+CGG 0.616367 3:+95256141 MsG0380017349.01.T01:three_prime_UTR
AAGCTTAATTGAAAGTATGG+GGG 0.620557 3:+95251628 MsG0380017349.01.T01:CDS
GTGCAGATCGGAGTGTTGGA+CGG 0.620791 3:-95251449 None:intergenic
TTACCAAAATGCCCTCAGAA+GGG 0.622588 3:-95251274 None:intergenic
GGGCAAAATGGTAATTTCCA+CGG 0.623626 3:-95251254 None:intergenic
CATGCAGCGTAAAGCTCGTG+AGG 0.627326 3:+95252711 MsG0380017349.01.T01:CDS
GAAACCTGTTGATTTCAACT+GGG 0.641172 3:-95255132 None:intergenic
ATCAGAGCCTATTCTGAGAG+GGG 0.648194 3:+95255184 MsG0380017349.01.T01:CDS
AGGTATTAACTGATCAAGAG+AGG 0.653894 3:+95252833 MsG0380017349.01.T01:CDS
ATATCAGAGCCTATTCTGAG+AGG 0.663120 3:+95255182 MsG0380017349.01.T01:CDS
AGAGAGGCAGAAACTAGAAG+AGG 0.669695 3:+95252849 MsG0380017349.01.T01:CDS
GTTCTGAAGAGTGATATAGC+AGG 0.673495 3:+95252339 MsG0380017349.01.T01:CDS
CAGAGACCTAAATAAGCGTG+AGG 0.681605 3:+95252813 MsG0380017349.01.T01:CDS
GCAGCGTAAAGCTCGTGAGG+AGG 0.682044 3:+95252714 MsG0380017349.01.T01:CDS
CATTGCATACAATTATATCG+AGG 0.690998 3:-95256198 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAAAAAA+AGG + Chr3:95251336-95251355 MsG0380017349.01.T01:five_prime_UTR 0.0%
!! AAAAAAAAAAAAAAAAAAAA+GGG + Chr3:95251336-95251355 MsG0380017349.01.T01:five_prime_UTR 0.0%
!! ACAAAAAAATTATGAATTAT+TGG - Chr3:95254893-95254912 None:intergenic 10.0%
!! ATATAAAAAAAATGTAACAT+AGG - Chr3:95255904-95255923 None:intergenic 10.0%
!! TAATCAAATATTTAATTCAA+AGG - Chr3:95255076-95255095 None:intergenic 10.0%
!! TTGAATTAAATATTTGATTA+TGG + Chr3:95255076-95255095 MsG0380017349.01.T01:intron 10.0%
!!! CAATAAAAAATCTTTAAAAT+AGG - Chr3:95252922-95252941 None:intergenic 10.0%
!!! GTATAATATAGAAATTTTAT+AGG + Chr3:95256124-95256143 MsG0380017349.01.T01:three_prime_UTR 10.0%
!!! TTTTTTTTTTTTTTTGAACA+AGG + Chr3:95254673-95254692 MsG0380017349.01.T01:intron 10.0%
!! AAAAAATTATGAATTATTGG+AGG - Chr3:95254890-95254909 None:intergenic 15.0%
!! AAATTGAATGTAAAATTTGT+AGG + Chr3:95252058-95252077 MsG0380017349.01.T01:intron 15.0%
!! AATTGAATGTAAAATTTGTA+GGG + Chr3:95252059-95252078 MsG0380017349.01.T01:intron 15.0%
!! AATTTCAATTTCTTAATGAA+GGG + Chr3:95251565-95251584 MsG0380017349.01.T01:intron 15.0%
!! ATGAAATTGAAATTGAAATT+GGG - Chr3:95251520-95251539 None:intergenic 15.0%
!! GATTGTATAAATTATAATCT+AGG - Chr3:95253509-95253528 None:intergenic 15.0%
!! TAAAACAAAATACAATACAA+AGG - Chr3:95253876-95253895 None:intergenic 15.0%
!! TTATAATTTATACAATCAGT+AGG + Chr3:95253512-95253531 MsG0380017349.01.T01:intron 15.0%
!! TTCATTAAGAAATTGAAATT+GGG - Chr3:95251565-95251584 None:intergenic 15.0%
!!! AATTGGTATATTTTTATACA+GGG + Chr3:95254310-95254329 MsG0380017349.01.T01:intron 15.0%
!!! ATGGTTTAAATCATTTTATT+TGG + Chr3:95251121-95251140 MsG0380017349.01.T01:five_prime_UTR 15.0%
!!! TATTTTCAGTTAATTAGTTT+TGG + Chr3:95251926-95251945 MsG0380017349.01.T01:intron 15.0%
!!! TCTAATTTTATGCATTATTT+TGG + Chr3:95254913-95254932 MsG0380017349.01.T01:intron 15.0%
!!! TTTTTTCTTTTCACATATAT+AGG - Chr3:95251322-95251341 None:intergenic 15.0%
!! AAAGCTATATTATGATGAAT+TGG + Chr3:95254293-95254312 MsG0380017349.01.T01:intron 20.0%
!! AAGTAAAAAGATTATTCAAC+AGG + Chr3:95256090-95256109 MsG0380017349.01.T01:exon 20.0%
!! AATGATTGAGAAATTAAAGT+TGG - Chr3:95253152-95253171 None:intergenic 20.0%
!! AATTAAGCTTTCTTTGAATA+AGG - Chr3:95251618-95251637 None:intergenic 20.0%
!! ATGATTGAGAAATTAAAGTT+GGG - Chr3:95253151-95253170 None:intergenic 20.0%
!! ATTTGAACATGAACAAATAA+AGG - Chr3:95254034-95254053 None:intergenic 20.0%
!! CAATTTCAATTTCTTAATGA+AGG + Chr3:95251564-95251583 MsG0380017349.01.T01:intron 20.0%
!! CTTCATTAAGAAATTGAAAT+TGG - Chr3:95251566-95251585 None:intergenic 20.0%
!! GATGAAATTGAAATTGAAAT+TGG - Chr3:95251521-95251540 None:intergenic 20.0%
!! GTTTCAATGTATATTCATTA+TGG + Chr3:95255710-95255729 MsG0380017349.01.T01:intron 20.0%
!! TCATTAAGAAATTGAAATTG+GGG - Chr3:95251564-95251583 None:intergenic 20.0%
!! TGATAAGTAAATGTATCAAA+GGG + Chr3:95254968-95254987 MsG0380017349.01.T01:intron 20.0%
!! TGTAATTGTTATATGATGAA+TGG + Chr3:95252097-95252116 MsG0380017349.01.T01:intron 20.0%
!! TTAAATCTCAAACAAAGTTT+CGG - Chr3:95254722-95254741 None:intergenic 20.0%
!! TTACTTTATGAATAAGTTTC+CGG - Chr3:95256076-95256095 None:intergenic 20.0%
!! TTGATAAGTAAATGTATCAA+AGG + Chr3:95254967-95254986 MsG0380017349.01.T01:intron 20.0%
!! TTTGAACATGAACAAATAAA+GGG - Chr3:95254033-95254052 None:intergenic 20.0%
!!! AAAAAAATGAGACATTTTTG+TGG - Chr3:95252676-95252695 None:intergenic 20.0%
!!! ATTATTTTGGATTTGTTTAG+CGG + Chr3:95254484-95254503 MsG0380017349.01.T01:intron 20.0%
!!! CATTGAGTTCATTTTATTTA+TGG + Chr3:95256337-95256356 MsG0380017349.01.T01:three_prime_UTR 20.0%
!!! CTCTTTTGTTTATGAATTTA+GGG + Chr3:95254569-95254588 MsG0380017349.01.T01:intron 20.0%
!!! GAATTGGTATATTTTTATAC+AGG + Chr3:95254309-95254328 MsG0380017349.01.T01:intron 20.0%
!!! TCTCTTTTGTTTATGAATTT+AGG + Chr3:95254568-95254587 MsG0380017349.01.T01:intron 20.0%
!!! TCTTTTGTTTATGAATTTAG+GGG + Chr3:95254570-95254589 MsG0380017349.01.T01:intron 20.0%
!!! TTTAATTTAAGGTACCTAAT+AGG - Chr3:95255853-95255872 None:intergenic 20.0%
!!! TTTTTTTTTGACATAAACCA+AGG - Chr3:95253618-95253637 None:intergenic 20.0%
! AAAAAGCTATTTGACAATAC+TGG - Chr3:95251883-95251902 None:intergenic 25.0%
! AAAAGTCCTTCAAAATGAAA+AGG - Chr3:95255943-95255962 None:intergenic 25.0%
! AAACATATGGAACTCATTAT+TGG + Chr3:95254442-95254461 MsG0380017349.01.T01:intron 25.0%
! AACAGAGTTACTAACAAAAA+TGG - Chr3:95254860-95254879 None:intergenic 25.0%
! AATCTATCCATATCTTTGTA+AGG + Chr3:95253568-95253587 MsG0380017349.01.T01:intron 25.0%
! ACATGAAATTGAGACATAAT+CGG - Chr3:95253685-95253704 None:intergenic 25.0%
! ACGATATATACAATTACCAA+TGG - Chr3:95252615-95252634 None:intergenic 25.0%
! AGAAAGCTTAATTGAAAGTA+TGG + Chr3:95251625-95251644 MsG0380017349.01.T01:CDS 25.0%
! ATGTTTACATACTTCATTCT+TGG + Chr3:95255545-95255564 MsG0380017349.01.T01:intron 25.0%
! GAATGAAGTATGTAAACATA+CGG - Chr3:95255544-95255563 None:intergenic 25.0%
! GATAAGTAAATGTATCAAAG+GGG + Chr3:95254969-95254988 MsG0380017349.01.T01:intron 25.0%
! TAAACAAAAGAGAAATGCAT+AGG - Chr3:95254561-95254580 None:intergenic 25.0%
! TATATAATTTATGCTGATCC+TGG + Chr3:95253479-95253498 MsG0380017349.01.T01:intron 25.0%
! TATGATAATTTCATCCCATA+AGG + Chr3:95252011-95252030 MsG0380017349.01.T01:intron 25.0%
! TCATTATCAATGAAATACCT+TGG + Chr3:95253598-95253617 MsG0380017349.01.T01:intron 25.0%
! TCTGTTTAAGAAGATACATA+GGG + Chr3:95251761-95251780 MsG0380017349.01.T01:intron 25.0%
! TGTAATTACAAATCTTAGTG+AGG + Chr3:95254264-95254283 MsG0380017349.01.T01:intron 25.0%
! TTACATAGAACATACCTTAT+GGG - Chr3:95252028-95252047 None:intergenic 25.0%
! TTGAACATGAACAAATAAAG+GGG - Chr3:95254032-95254051 None:intergenic 25.0%
! TTGTTCATGTTCAAATTTCT+GGG + Chr3:95254038-95254057 MsG0380017349.01.T01:intron 25.0%
! TTTACATAGAACATACCTTA+TGG - Chr3:95252029-95252048 None:intergenic 25.0%
! TTTAGAAGCAAAGGAAATTA+AGG + Chr3:95251476-95251495 MsG0380017349.01.T01:five_prime_UTR 25.0%
! TTTGTTCATGTTCAAATTTC+TGG + Chr3:95254037-95254056 MsG0380017349.01.T01:intron 25.0%
!! AAAAAAGTATATAGTCTGTC+TGG + Chr3:95253634-95253653 MsG0380017349.01.T01:intron 25.0%
!! AAAGCTTAATTGAAAGTATG+GGG + Chr3:95251627-95251646 MsG0380017349.01.T01:CDS 25.0%
!! ATTTCATGTTTAACTTTGAG+AGG + Chr3:95253696-95253715 MsG0380017349.01.T01:intron 25.0%
!! CAAAATAATTTTCCTAACCT+TGG - Chr3:95254473-95254492 None:intergenic 25.0%
!! CAAGGTTAGGAAAATTATTT+TGG + Chr3:95254471-95254490 MsG0380017349.01.T01:intron 25.0%
!! CTTTTACCTTTTCATTTTGA+AGG + Chr3:95255934-95255953 MsG0380017349.01.T01:intron 25.0%
!! GAAAGCTTAATTGAAAGTAT+GGG + Chr3:95251626-95251645 MsG0380017349.01.T01:CDS 25.0%
!! GTAAATTTTTGTACAAGTGA+TGG + Chr3:95251691-95251710 MsG0380017349.01.T01:intron 25.0%
!! GTACTTTTCTTTCGTAAATT+TGG - Chr3:95251188-95251207 None:intergenic 25.0%
!! TTTTTCATCTAAGAATCTAC+AGG - Chr3:95252283-95252302 None:intergenic 25.0%
!!! ATTTCCTTTGCTTCTAAAAT+CGG - Chr3:95251474-95251493 None:intergenic 25.0%
!!! CTTTTGTTTATGAATTTAGG+GGG + Chr3:95254571-95254590 MsG0380017349.01.T01:intron 25.0%
!!! TCTTTACTCTTTTTTTCGAT+AGG + Chr3:95253229-95253248 MsG0380017349.01.T01:intron 25.0%
!!! TTTTTGATGGTTAAGTTCAT+AGG + Chr3:95253757-95253776 MsG0380017349.01.T01:intron 25.0%
AAATCCCCAAGAAAAATGAT+GGG - Chr3:95253661-95253680 None:intergenic 30.0%
AAATTTGAATGCTAAGGAAC+AGG + Chr3:95252493-95252512 MsG0380017349.01.T01:CDS 30.0%
AATATGCAGATTGATGTATG+AGG + Chr3:95256279-95256298 MsG0380017349.01.T01:three_prime_UTR 30.0%
AATCAGTAGGTAATAGAAGT+TGG + Chr3:95253525-95253544 MsG0380017349.01.T01:intron 30.0%
AATGTTTCGGAGACAAAAAA+GGG + Chr3:95253358-95253377 MsG0380017349.01.T01:intron 30.0%
AGAGCTAAATTTGAATGCTA+AGG + Chr3:95252487-95252506 MsG0380017349.01.T01:CDS 30.0%
AGATCAGATACAAAGGAAAA+TGG - Chr3:95251848-95251867 None:intergenic 30.0%
ATCAGTAGGTAATAGAAGTT+GGG + Chr3:95253526-95253545 MsG0380017349.01.T01:intron 30.0%
ATCTGATTCATGCTATAACT+TGG + Chr3:95254594-95254613 MsG0380017349.01.T01:intron 30.0%
ATGGTTGAATTTGATCTGAA+TGG + Chr3:95251786-95251805 MsG0380017349.01.T01:intron 30.0%
CAGTAATGGTAACAAACATA+TGG + Chr3:95254429-95254448 MsG0380017349.01.T01:intron 30.0%
CATTGCATACAATTATATCG+AGG - Chr3:95256201-95256220 None:intergenic 30.0%
GAGAAATCCTTACAAAGATA+TGG - Chr3:95253578-95253597 None:intergenic 30.0%
GATGTAGATGTTTGGAAAAT+TGG + Chr3:95254381-95254400 MsG0380017349.01.T01:intron 30.0%
GATTTGAATAACAATGTCCT+TGG + Chr3:95253032-95253051 MsG0380017349.01.T01:intron 30.0%
GCTAAATCAGTATTACTCTT+CGG - Chr3:95253394-95253413 None:intergenic 30.0%
GGTAAATCATTTCTGTTTGA+TGG + Chr3:95251712-95251731 MsG0380017349.01.T01:intron 30.0%
GTACCTAATAGGATTAAGTA+GGG - Chr3:95255842-95255861 None:intergenic 30.0%
GTCTGTTTAAGAAGATACAT+AGG + Chr3:95251760-95251779 MsG0380017349.01.T01:intron 30.0%
TAATTAGAATACCTTTGTGC+AGG + Chr3:95255977-95255996 MsG0380017349.01.T01:intron 30.0%
TAATTGTATGCAATGTCACT+AGG + Chr3:95256206-95256225 MsG0380017349.01.T01:three_prime_UTR 30.0%
TATCAACGAAGAGAATGTTT+CGG + Chr3:95253345-95253364 MsG0380017349.01.T01:intron 30.0%
TGACTTAACATGAGAATTGA+CGG - Chr3:95255400-95255419 None:intergenic 30.0%
TGACTTCTACTAAACCAAAT+AGG + Chr3:95251220-95251239 MsG0380017349.01.T01:five_prime_UTR 30.0%
TGTGTTAATTAGGTGCATAT+TGG + Chr3:95253782-95253801 MsG0380017349.01.T01:intron 30.0%
TGTTCATGTTCAAATTTCTG+GGG + Chr3:95254039-95254058 MsG0380017349.01.T01:intron 30.0%
TTAATACCTCACGCTTATTT+AGG - Chr3:95252822-95252841 None:intergenic 30.0%
TTCATTTAAAGAGAGTCAGT+AGG - Chr3:95253127-95253146 None:intergenic 30.0%
TTGCATCGAATAAAATGTCT+TGG + Chr3:95252549-95252568 MsG0380017349.01.T01:intron 30.0%
TTTCCCTACTTAATCCTATT+AGG + Chr3:95255836-95255855 MsG0380017349.01.T01:intron 30.0%
! AAGCTTAATTGAAAGTATGG+GGG + Chr3:95251628-95251647 MsG0380017349.01.T01:CDS 30.0%
! AATTTGACTTTCAAGATGAG+TGG + Chr3:95255340-95255359 MsG0380017349.01.T01:CDS 30.0%
! ACTTTGTTTCGTTTCTTTGT+TGG + Chr3:95252428-95252447 MsG0380017349.01.T01:intron 30.0%
! ATATTTGATTATGGAGCATC+AGG + Chr3:95255085-95255104 MsG0380017349.01.T01:intron 30.0%
! ATGAGTTGGATGAAAAAATG+CGG + Chr3:95252773-95252792 MsG0380017349.01.T01:CDS 30.0%
! ATTAGATTCTGAAAACTGAG+AGG - Chr3:95253446-95253465 None:intergenic 30.0%
! ATTTTCATTAGGACAAGCAT+TGG + Chr3:95253294-95253313 MsG0380017349.01.T01:intron 30.0%
! ATTTTCCTTTGTATCTGATC+TGG + Chr3:95251847-95251866 MsG0380017349.01.T01:intron 30.0%
! CAGTTTTCAGAATCTAATCA+AGG + Chr3:95253448-95253467 MsG0380017349.01.T01:intron 30.0%
! CATATGTTTGTTACCATTAC+TGG - Chr3:95254431-95254450 None:intergenic 30.0%
! CTTTTCACATATATAGGCAA+GGG - Chr3:95251316-95251335 None:intergenic 30.0%
! TCTTTTCACATATATAGGCA+AGG - Chr3:95251317-95251336 None:intergenic 30.0%
! TTCATAGGAGTGTGTTAATT+AGG + Chr3:95253772-95253791 MsG0380017349.01.T01:intron 30.0%
! TTTTACCAGATCAGATACAA+AGG - Chr3:95251855-95251874 None:intergenic 30.0%
! TTTTCACATATATAGGCAAG+GGG - Chr3:95251315-95251334 None:intergenic 30.0%
! TTTTCATTAGGACAAGCATT+GGG + Chr3:95253295-95253314 MsG0380017349.01.T01:intron 30.0%
!! AATTGTGATTTTAGCCGTAT+TGG + Chr3:95256165-95256184 MsG0380017349.01.T01:three_prime_UTR 30.0%
!! ATAGTTCTGAATTGCGATTA+CGG - Chr3:95256232-95256251 None:intergenic 30.0%
!! ATGATTTGTATGCGTTGTTT+TGG + Chr3:95252135-95252154 MsG0380017349.01.T01:intron 30.0%
!! GAGAGGATTTTGATATAATC+TGG + Chr3:95253713-95253732 MsG0380017349.01.T01:intron 30.0%
!! GATATGGATAGATTTGTTGA+AGG - Chr3:95253562-95253581 None:intergenic 30.0%
!!! AAGCTAGCTTTTCTTTATGT+AGG + Chr3:95254085-95254104 MsG0380017349.01.T01:intron 30.0%
!!! ATTTAGCTTGGTGTTTTTGA+TGG + Chr3:95253744-95253763 MsG0380017349.01.T01:intron 30.0%
!!! CAAATTTTTTGCAAGCACAA+TGG - Chr3:95252966-95252985 None:intergenic 30.0%
!!! GCATGGTTTGTTTTTTTTGA+AGG + Chr3:95255771-95255790 MsG0380017349.01.T01:intron 30.0%
!!! GTGCATATTGGTTGTTTTTA+GGG + Chr3:95253794-95253813 MsG0380017349.01.T01:intron 30.0%
!!! TCATTTTTTTGTCAGAGTCA+AGG + Chr3:95252686-95252705 MsG0380017349.01.T01:intron 30.0%
!!! TTACTTAGTCTTGCGTTTTT+TGG - Chr3:95255654-95255673 None:intergenic 30.0%
!!! TTTTTTGAAGGAATGATGCA+TGG + Chr3:95255783-95255802 MsG0380017349.01.T01:intron 30.0%
AAATGTCTTGGACGTCATAT+TGG + Chr3:95252561-95252580 MsG0380017349.01.T01:intron 35.0%
AAGCAAATGGTTTGACAGAT+TGG + Chr3:95255210-95255229 MsG0380017349.01.T01:intron 35.0%
AATACCTTTGTGCAGGATTA+TGG + Chr3:95255984-95256003 MsG0380017349.01.T01:intron 35.0%
AATAGGAAAATCAATGTCCG+TGG + Chr3:95251237-95251256 MsG0380017349.01.T01:five_prime_UTR 35.0%
AATTATAATCTAGGCAGTCC+AGG - Chr3:95253500-95253519 None:intergenic 35.0%
AGAAGTCCAAAATCACATAC+AGG + Chr3:95252317-95252336 MsG0380017349.01.T01:CDS 35.0%
AGAGAAGTTGAGTAATGAGT+TGG + Chr3:95252759-95252778 MsG0380017349.01.T01:CDS 35.0%
AGGACAGTCATATCATTGTA+TGG - Chr3:95253856-95253875 None:intergenic 35.0%
AGGTATTAACTGATCAAGAG+AGG + Chr3:95252833-95252852 MsG0380017349.01.T01:CDS 35.0%
AGTAAATGTATCAAAGGGGA+AGG + Chr3:95254973-95254992 MsG0380017349.01.T01:intron 35.0%
AGTGGTGAGACATTAGATTA+CGG + Chr3:95254129-95254148 MsG0380017349.01.T01:intron 35.0%
ATAAGCATATGCAAATCTGC+AGG + Chr3:95252232-95252251 MsG0380017349.01.T01:intron 35.0%
ATCTTGATTGACGATGAGTT+TGG - Chr3:95254173-95254192 None:intergenic 35.0%
ATGCATGAATGTTCCATTTG+TGG + Chr3:95253265-95253284 MsG0380017349.01.T01:intron 35.0%
ATGTTTCGGAGACAAAAAAG+GGG + Chr3:95253359-95253378 MsG0380017349.01.T01:intron 35.0%
ATTAGTCATGTTTGGATCAG+TGG + Chr3:95254111-95254130 MsG0380017349.01.T01:intron 35.0%
ATTCAAATCAAGAGCAACCA+AGG - Chr3:95253021-95253040 None:intergenic 35.0%
ATTGCTTCTGTGACTTGAAA+AGG + Chr3:95254358-95254377 MsG0380017349.01.T01:intron 35.0%
ATTTGATCTGTCTTTCTCTG+TGG + Chr3:95252981-95253000 MsG0380017349.01.T01:intron 35.0%
CAAATCCCCAAGAAAAATGA+TGG - Chr3:95253662-95253681 None:intergenic 35.0%
CAGCTTACCATTTGTGATAT+CGG - Chr3:95255502-95255521 None:intergenic 35.0%
CATTAGCATCAGATTGATTG+AGG + Chr3:95252176-95252195 MsG0380017349.01.T01:intron 35.0%
GAAGAAACAAGAAGAATTGG+AGG + Chr3:95251669-95251688 MsG0380017349.01.T01:CDS 35.0%
GAATGTTTCGGAGACAAAAA+AGG + Chr3:95253357-95253376 MsG0380017349.01.T01:intron 35.0%
GAGGAAGAAACAAGAAGAAT+TGG + Chr3:95251666-95251685 MsG0380017349.01.T01:CDS 35.0%
GAGGCAAAATACATCCAATA+CGG - Chr3:95256182-95256201 None:intergenic 35.0%
GAGTCAGTAGGATCAAAATA+AGG - Chr3:95253115-95253134 None:intergenic 35.0%
GGTACCTAATAGGATTAAGT+AGG - Chr3:95255843-95255862 None:intergenic 35.0%
GTAATCGCAATTCAGAACTA+TGG + Chr3:95256231-95256250 MsG0380017349.01.T01:three_prime_UTR 35.0%
GTAGCTGTGAATACTTCAAT+TGG + Chr3:95255599-95255618 MsG0380017349.01.T01:intron 35.0%
GTAGGCTAATTAGTCATGTT+TGG + Chr3:95254103-95254122 MsG0380017349.01.T01:intron 35.0%
GTTCCTACGAATTGATTACA+GGG + Chr3:95255732-95255751 MsG0380017349.01.T01:intron 35.0%
TAAGAAGATACATAGGGACA+TGG + Chr3:95251767-95251786 MsG0380017349.01.T01:intron 35.0%
TAAGCATATGCAAATCTGCA+GGG + Chr3:95252233-95252252 MsG0380017349.01.T01:intron 35.0%
TAGCCAATTTCAGAATGTCT+TGG - Chr3:95255372-95255391 None:intergenic 35.0%
TGAAAAGGGATGTAGATGTT+TGG + Chr3:95254373-95254392 MsG0380017349.01.T01:intron 35.0%
TGAAAATCTTTGCCCACAAA+TGG - Chr3:95253281-95253300 None:intergenic 35.0%
TGATTACGTTCATTTAAGCC+AGG + Chr3:95255270-95255289 MsG0380017349.01.T01:intron 35.0%
TGCATGAATGTTCCATTTGT+GGG + Chr3:95253266-95253285 MsG0380017349.01.T01:intron 35.0%
TTAAAGCTTAGCACTACCAT+TGG + Chr3:95252596-95252615 MsG0380017349.01.T01:intron 35.0%
TTGCTTCTGTGACTTGAAAA+GGG + Chr3:95254359-95254378 MsG0380017349.01.T01:intron 35.0%
TTTCCCTGTAATCAATTCGT+AGG - Chr3:95255738-95255757 None:intergenic 35.0%
TTTCTTTGTTGGACTCTGAT+AGG + Chr3:95252439-95252458 MsG0380017349.01.T01:intron 35.0%
! CTGGTTTGATACATTTAGCT+TGG + Chr3:95253732-95253751 MsG0380017349.01.T01:intron 35.0%
! GAAATGATGATGATGATGCA+TGG + Chr3:95255754-95255773 MsG0380017349.01.T01:intron 35.0%
! GTTCATGTTCAAATTTCTGG+GGG + Chr3:95254040-95254059 MsG0380017349.01.T01:intron 35.0%
! TAATTGAAAGTATGGGGGTT+GGG + Chr3:95251633-95251652 MsG0380017349.01.T01:CDS 35.0%
! TCAGAACCTGTATGTGATTT+TGG - Chr3:95252326-95252345 None:intergenic 35.0%
! TGTGGGCAAAGATTTTCATT+AGG + Chr3:95253283-95253302 MsG0380017349.01.T01:intron 35.0%
! TTAATTGAAAGTATGGGGGT+TGG + Chr3:95251632-95251651 MsG0380017349.01.T01:CDS 35.0%
! TTGAAGTATTCACAGCTACA+TGG - Chr3:95255598-95255617 None:intergenic 35.0%
!! AGACATTCTGAAATTGGCTA+TGG + Chr3:95255372-95255391 MsG0380017349.01.T01:CDS 35.0%
!! AGGGTTCTGAATAATGTCTA+GGG + Chr3:95254329-95254348 MsG0380017349.01.T01:intron 35.0%
!! GAAACCTGTTGATTTCAACT+GGG - Chr3:95255135-95255154 None:intergenic 35.0%
!! TATAGGTCTCTAAAACTGCA+CGG + Chr3:95256141-95256160 MsG0380017349.01.T01:three_prime_UTR 35.0%
!! TCACCAAGACATTCTGAAAT+TGG + Chr3:95255366-95255385 MsG0380017349.01.T01:CDS 35.0%
!! TGAAACCTGTTGATTTCAAC+TGG - Chr3:95255136-95255155 None:intergenic 35.0%
!! TTTGGTGTTGTTAGACTTGT+TGG - Chr3:95255636-95255655 None:intergenic 35.0%
!!! CGGACATTGATTTTCCTATT+TGG - Chr3:95251237-95251256 None:intergenic 35.0%
!!! GGTGCATATTGGTTGTTTTT+AGG + Chr3:95253793-95253812 MsG0380017349.01.T01:intron 35.0%
!!! GTTGTTTTTAGGGAATCTCT+TGG + Chr3:95253804-95253823 MsG0380017349.01.T01:intron 35.0%
!!! TATGCGTTGTTTTGGATCTT+TGG + Chr3:95252143-95252162 MsG0380017349.01.T01:intron 35.0%
!!! TTTTTTCGTTGTTTGCTGCA+AGG + Chr3:95254760-95254779 MsG0380017349.01.T01:intron 35.0%
AAAAAAGGGGACGAGAGAAA+CGG + Chr3:95251351-95251370 MsG0380017349.01.T01:five_prime_UTR 40.0%
AAGAAATGAGCATCACAGCA+GGG + Chr3:95253966-95253985 MsG0380017349.01.T01:intron 40.0%
AATTGAAATTGGGGCTGAGA+AGG - Chr3:95251555-95251574 None:intergenic 40.0%
ACAGGCAAACTTTGCTCTTA+GGG - Chr3:95256050-95256069 None:intergenic 40.0%
ACTAGAAGAGGACAAGAAGA+AGG + Chr3:95252861-95252880 MsG0380017349.01.T01:CDS 40.0%
ACTCATTATTGGAGATGCCA+AGG + Chr3:95254453-95254472 MsG0380017349.01.T01:intron 40.0%
AGAGGAGAGCAACTCTAATT+TGG + Chr3:95256008-95256027 MsG0380017349.01.T01:CDS 40.0%
AGTAGGTAATAGAAGTTGGG+TGG + Chr3:95253529-95253548 MsG0380017349.01.T01:intron 40.0%
ATAACGACTTCCAATGCTCA+AGG - Chr3:95254628-95254647 None:intergenic 40.0%
ATATCAGAGCCTATTCTGAG+AGG + Chr3:95255182-95255201 MsG0380017349.01.T01:CDS 40.0%
ATTCAAATTCAGCGCAACCA+AGG - Chr3:95253083-95253102 None:intergenic 40.0%
ATTGAAATTGGGGCTGAGAA+GGG - Chr3:95251554-95251573 None:intergenic 40.0%
CGTTTAGCCGATATCACAAA+TGG + Chr3:95255492-95255511 MsG0380017349.01.T01:CDS 40.0%
CTTGGTTGTCTTTGGACTTT+AGG + Chr3:95253822-95253841 MsG0380017349.01.T01:intron 40.0%
GAAAAAGAACAGAACGGAAG+AGG + Chr3:95251400-95251419 MsG0380017349.01.T01:five_prime_UTR 40.0%
GGACGAGAAAAAGAACAGAA+CGG + Chr3:95251394-95251413 MsG0380017349.01.T01:five_prime_UTR 40.0%
GGGCAAAATGGTAATTTCCA+CGG - Chr3:95251257-95251276 None:intergenic 40.0%
GGTGATCTAGGGAAAATTGT+AGG + Chr3:95255022-95255041 MsG0380017349.01.T01:intron 40.0%
GGTTCCTACGAATTGATTAC+AGG + Chr3:95255731-95255750 MsG0380017349.01.T01:intron 40.0%
GTAGGTAATAGAAGTTGGGT+GGG + Chr3:95253530-95253549 MsG0380017349.01.T01:intron 40.0%
TAAGAAATGAGCATCACAGC+AGG + Chr3:95253965-95253984 MsG0380017349.01.T01:intron 40.0%
TACAGGCAAACTTTGCTCTT+AGG - Chr3:95256051-95256070 None:intergenic 40.0%
TATAGCAGGAAAAGATGCAG+AGG + Chr3:95252353-95252372 MsG0380017349.01.T01:CDS 40.0%
TATTCACAGCTACATGGAAG+AGG - Chr3:95255592-95255611 None:intergenic 40.0%
TCTTCCATAATCCTGCACAA+AGG - Chr3:95255991-95256010 None:intergenic 40.0%
TGAATAAGTTTCCGGCATAC+AGG - Chr3:95256068-95256087 None:intergenic 40.0%
TTACCAAAATGCCCTCAGAA+GGG - Chr3:95251277-95251296 None:intergenic 40.0%
TTATTGGAGATGCCAAGGTT+AGG + Chr3:95254458-95254477 MsG0380017349.01.T01:intron 40.0%
TTTACCAAAATGCCCTCAGA+AGG - Chr3:95251278-95251297 None:intergenic 40.0%
TTTGTGCAGGATTATGGAAG+AGG + Chr3:95255990-95256009 MsG0380017349.01.T01:intron 40.0%
! AAGGCTAACTTTGGTGATCT+AGG + Chr3:95255010-95255029 MsG0380017349.01.T01:intron 40.0%
! AGATGCAGAGGTAGGATTTT+CGG + Chr3:95252365-95252384 MsG0380017349.01.T01:intron 40.0%
! AGGCTAACTTTGGTGATCTA+GGG + Chr3:95255011-95255030 MsG0380017349.01.T01:intron 40.0%
! ATCAAAGGGGAAGGTTTTTC+AGG + Chr3:95254982-95255001 MsG0380017349.01.T01:intron 40.0%
! ATGTTCAAATTTCTGGGGGA+GGG + Chr3:95254044-95254063 MsG0380017349.01.T01:intron 40.0%
! ATTACCATTTTGCCCTTCTG+AGG + Chr3:95251262-95251281 MsG0380017349.01.T01:five_prime_UTR 40.0%
! TATCAGAGCCTATTCTGAGA+GGG + Chr3:95255183-95255202 MsG0380017349.01.T01:CDS 40.0%
! TCAAAGGGGAAGGTTTTTCA+GGG + Chr3:95254983-95255002 MsG0380017349.01.T01:intron 40.0%
! TGAGGAGGTACGAAGTATAT+TGG + Chr3:95252729-95252748 MsG0380017349.01.T01:CDS 40.0%
! TGTGATTTTGGACTTCTTCG+AGG - Chr3:95252314-95252333 None:intergenic 40.0%
! TTACCATTTTGCCCTTCTGA+GGG + Chr3:95251263-95251282 MsG0380017349.01.T01:five_prime_UTR 40.0%
! TTGATCTGAATGGTGCTGAA+TGG + Chr3:95251796-95251815 MsG0380017349.01.T01:intron 40.0%
!! CAGGGTTCTGAATAATGTCT+AGG + Chr3:95254328-95254347 MsG0380017349.01.T01:intron 40.0%
!! CTGGTCCCATCATTTTTCTT+GGG + Chr3:95253653-95253672 MsG0380017349.01.T01:intron 40.0%
!! CTTCTAAAATCGGTGCAGAT+CGG - Chr3:95251464-95251483 None:intergenic 40.0%
!! GGGTTCTGAATAATGTCTAG+GGG + Chr3:95254330-95254349 MsG0380017349.01.T01:intron 40.0%
!! GTTCTGAAGAGTGATATAGC+AGG + Chr3:95252339-95252358 MsG0380017349.01.T01:CDS 40.0%
!! TCTGGTCCCATCATTTTTCT+TGG + Chr3:95253652-95253671 MsG0380017349.01.T01:intron 40.0%
!! TGGTCCCATCATTTTTCTTG+GGG + Chr3:95253654-95253673 MsG0380017349.01.T01:intron 40.0%
!!! GAAGGTTTTTCAGGGACTAA+AGG + Chr3:95254991-95255010 MsG0380017349.01.T01:intron 40.0%
!!! TGCACCGATTTTAGAAGCAA+AGG + Chr3:95251467-95251486 MsG0380017349.01.T01:five_prime_UTR 40.0%
AAAAAGGGGACGAGAGAAAC+GGG + Chr3:95251352-95251371 MsG0380017349.01.T01:five_prime_UTR 45.0%
AAATGCGGAAGCTTGATACC+TGG + Chr3:95252788-95252807 MsG0380017349.01.T01:CDS 45.0%
ACCGATGCAAGAATAAGTCC+TGG - Chr3:95255291-95255310 None:intergenic 45.0%
AGAGAGGCAGAAACTAGAAG+AGG + Chr3:95252849-95252868 MsG0380017349.01.T01:CDS 45.0%
AGCAAAGTTTGCCTGTATGC+CGG + Chr3:95256054-95256073 MsG0380017349.01.T01:CDS 45.0%
CAGAGACCTAAATAAGCGTG+AGG + Chr3:95252813-95252832 MsG0380017349.01.T01:CDS 45.0%
CAGGCAAACTTTGCTCTTAG+GGG - Chr3:95256049-95256068 None:intergenic 45.0%
CAGGGACTAAAGGCTAACTT+TGG + Chr3:95255001-95255020 MsG0380017349.01.T01:intron 45.0%
CGAGCACATCAGTTGATCAA+AGG + Chr3:95255439-95255458 MsG0380017349.01.T01:CDS 45.0%
CTTATTTAGGTCTCTGCTCC+AGG - Chr3:95252809-95252828 None:intergenic 45.0%
GAGCAACCAAGGACATTAGT+AGG - Chr3:95253010-95253029 None:intergenic 45.0%
GCCAGGACTTATTCTTGCAT+CGG + Chr3:95255287-95255306 MsG0380017349.01.T01:intron 45.0%
GCTTCCCAGTTGAAATCAAC+AGG + Chr3:95255128-95255147 MsG0380017349.01.T01:CDS 45.0%
GGGAATCTCTTGGTTGTCTT+TGG + Chr3:95253814-95253833 MsG0380017349.01.T01:intron 45.0%
TGGTCTCCTACTAATGTCCT+TGG + Chr3:95253001-95253020 MsG0380017349.01.T01:intron 45.0%
TTGACTGTCACTGCCAGTAA+TGG + Chr3:95254415-95254434 MsG0380017349.01.T01:intron 45.0%
! ATCAGAGCCTATTCTGAGAG+GGG + Chr3:95255184-95255203 MsG0380017349.01.T01:CDS 45.0%
! CATGTTCAAATTTCTGGGGG+AGG + Chr3:95254043-95254062 MsG0380017349.01.T01:intron 45.0%
!! GGTCTACTTTGTTGTTGCTC+AGG + Chr3:95254934-95254953 MsG0380017349.01.T01:intron 45.0%
!! TCATTAGGACAAGCATTGGG+TGG + Chr3:95253298-95253317 MsG0380017349.01.T01:intron 45.0%
!! AAAAAAAAAAAAAAAAAAAG+GGG + Chr3:95251338-95251357 MsG0380017349.01.T01:five_prime_UTR 5.0%
!!! AATAATAATAGTTTAATTTA+AGG - Chr3:95255864-95255883 None:intergenic 5.0%
AATTGGGGCTGAGAAGGGTT+AGG - Chr3:95251549-95251568 None:intergenic 50.0%
AGAACAGAACGGAAGAGGAG+AGG + Chr3:95251405-95251424 MsG0380017349.01.T01:five_prime_UTR 50.0%
ATGCCCTCAGAAGGGCAAAA+TGG - Chr3:95251269-95251288 None:intergenic 50.0%
ATGGGGGTTGGGTTTGCAAT+TGG + Chr3:95251644-95251663 MsG0380017349.01.T01:CDS 50.0%
ATTGGGGCTGAGAAGGGTTA+GGG - Chr3:95251548-95251567 None:intergenic 50.0%
CATTGGGTGGACACATGAGA+AGG + Chr3:95253311-95253330 MsG0380017349.01.T01:intron 50.0%
GAACAGAACGGAAGAGGAGA+GGG + Chr3:95251406-95251425 MsG0380017349.01.T01:five_prime_UTR 50.0%
GCAAACTTTGCTCTTAGGGG+TGG - Chr3:95256046-95256065 None:intergenic 50.0%
GCAGGAAAAGATGCAGAGGT+AGG + Chr3:95252357-95252376 MsG0380017349.01.T01:intron 50.0%
GGTACAGAGACCTTGAGCAT+TGG + Chr3:95254615-95254634 MsG0380017349.01.T01:intron 50.0%
!!! TTGCCCTTCTGAGGGCATTT+TGG + Chr3:95251271-95251290 MsG0380017349.01.T01:five_prime_UTR 50.0%
ATCGGTGCAGATCGGAGTGT+TGG - Chr3:95251456-95251475 None:intergenic 55.0%
CATGCAGCGTAAAGCTCGTG+AGG + Chr3:95252711-95252730 MsG0380017349.01.T01:CDS 55.0%
CTGAGAGGGGCAGAAGCAAA+TGG + Chr3:95255197-95255216 MsG0380017349.01.T01:CDS 55.0%
GCTTCTGCCCCTCTCAGAAT+AGG - Chr3:95255194-95255213 None:intergenic 55.0%
GGCTGAGAAGGGTTAGGGTT+TGG - Chr3:95251543-95251562 None:intergenic 55.0%
GGGGTTGGGTTTGCAATTGG+AGG + Chr3:95251647-95251666 MsG0380017349.01.T01:CDS 55.0%
TCGGAGACAAAAAAGGGGCG+TGG + Chr3:95253364-95253383 MsG0380017349.01.T01:intron 55.0%
!! GTGCAGATCGGAGTGTTGGA+CGG - Chr3:95251452-95251471 None:intergenic 55.0%
ACGGGAACGGGAGAGGAAGA+AGG + Chr3:95251370-95251389 MsG0380017349.01.T01:five_prime_UTR 60.0%
CGGGAACGGGAGAGGAAGAA+GGG + Chr3:95251371-95251390 MsG0380017349.01.T01:five_prime_UTR 60.0%
GAGAGAAACGGGAACGGGAG+AGG + Chr3:95251363-95251382 MsG0380017349.01.T01:five_prime_UTR 60.0%
GCAGCGTAAAGCTCGTGAGG+AGG + Chr3:95252714-95252733 MsG0380017349.01.T01:CDS 60.0%
GGAACGGGAGAGGAAGAAGG+GGG + Chr3:95251373-95251392 MsG0380017349.01.T01:five_prime_UTR 60.0%
GGGAACGGGAGAGGAAGAAG+GGG + Chr3:95251372-95251391 MsG0380017349.01.T01:five_prime_UTR 60.0%
GGGACGAGAGAAACGGGAAC+GGG + Chr3:95251358-95251377 MsG0380017349.01.T01:five_prime_UTR 60.0%
GGGGACGAGAGAAACGGGAA+CGG + Chr3:95251357-95251376 MsG0380017349.01.T01:five_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
Chr3 gene 95251115 95256386 95251115 ID=MsG0380017349.01;Name=MsG0380017349.01
Chr3 mRNA 95251115 95256386 95251115 ID=MsG0380017349.01.T01;Parent=MsG0380017349.01;Name=MsG0380017349.01.T01;_AED=0.49;_eAED=0.55;_QI=402|0.28|0.62|1|0.85|0.75|8|296|284
Chr3 exon 95251115 95251497 95251115 ID=MsG0380017349.01.T01:exon:17343;Parent=MsG0380017349.01.T01
Chr3 exon 95251586 95251690 95251586 ID=MsG0380017349.01.T01:exon:17344;Parent=MsG0380017349.01.T01
Chr3 exon 95252287 95252374 95252287 ID=MsG0380017349.01.T01:exon:17345;Parent=MsG0380017349.01.T01
Chr3 exon 95252461 95252535 95252461 ID=MsG0380017349.01.T01:exon:17346;Parent=MsG0380017349.01.T01
Chr3 exon 95252703 95252882 95252703 ID=MsG0380017349.01.T01:exon:17347;Parent=MsG0380017349.01.T01
Chr3 exon 95255107 95255218 95255107 ID=MsG0380017349.01.T01:exon:17348;Parent=MsG0380017349.01.T01
Chr3 exon 95255292 95255513 95255292 ID=MsG0380017349.01.T01:exon:17349;Parent=MsG0380017349.01.T01
Chr3 exon 95255999 95256386 95255999 ID=MsG0380017349.01.T01:exon:17350;Parent=MsG0380017349.01.T01
Chr3 five_prime_UTR 95251115 95251497 95251115 ID=MsG0380017349.01.T01:five_prime_utr;Parent=MsG0380017349.01.T01
Chr3 five_prime_UTR 95251586 95251604 95251586 ID=MsG0380017349.01.T01:five_prime_utr;Parent=MsG0380017349.01.T01
Chr3 CDS 95251605 95251690 95251605 ID=MsG0380017349.01.T01:cds;Parent=MsG0380017349.01.T01
Chr3 CDS 95252287 95252374 95252287 ID=MsG0380017349.01.T01:cds;Parent=MsG0380017349.01.T01
Chr3 CDS 95252461 95252535 95252461 ID=MsG0380017349.01.T01:cds;Parent=MsG0380017349.01.T01
Chr3 CDS 95252703 95252882 95252703 ID=MsG0380017349.01.T01:cds;Parent=MsG0380017349.01.T01
Chr3 CDS 95255107 95255218 95255107 ID=MsG0380017349.01.T01:cds;Parent=MsG0380017349.01.T01
Chr3 CDS 95255292 95255513 95255292 ID=MsG0380017349.01.T01:cds;Parent=MsG0380017349.01.T01
Chr3 CDS 95255999 95256090 95255999 ID=MsG0380017349.01.T01:cds;Parent=MsG0380017349.01.T01
Chr3 three_prime_UTR 95256091 95256386 95256091 ID=MsG0380017349.01.T01:three_prime_utr;Parent=MsG0380017349.01.T01
Gene Sequence

>MsG0380017349.01.T01

ATGTGTGTCTCCTTATTCAAAGAAAGCTTAATTGAAAGTATGGGGGTTGGGTTTGCAATTGGAGGAAGAAACAAGAAGAATTGGAGATTCTTAGATGAAAAAGAGAAAAGCCTCGAAGAAGTCCAAAATCACATACAGGTTCTGAAGAGTGATATAGCAGGAAAAGATGCAGAGGTTGCACAGATGAAAGTTCATATTTCAGAGCTAAATTTGAATGCTAAGGAACAGGCAATTGAGTATAAAGAGAAATCAAGGAGCATGCAGCGTAAAGCTCGTGAGGAGGTACGAAGTATATTGGAAGAACAAGAGAAGTTGAGTAATGAGTTGGATGAAAAAATGCGGAAGCTTGATACCTGGAGCAGAGACCTAAATAAGCGTGAGGTATTAACTGATCAAGAGAGGCAGAAACTAGAAGAGGACAAGAAGAAGGATACTGATCAATTTGTGATGGCTTCCCAGTTGAAATCAACAGGTTTCAATATAGCTTTTGCAGCTGTAGCAGAGATATCAGAGCCTATTCTGAGAGGGGCAGAAGCAAATGGACTTATTCTTGCATCGGTTGTTATGTGTTTGATGTTTGCGTTTGACAAATTTGACTTTCAAGATGAGTGGATTTCACCAAGACATTCTGAAATTGGCTATGGAGCCGTCAATTCTCATGTTAAGTCAAGTAAATGCACTAAAGTATCGAGCACATCAGTTGATCAAAGGCATAAATGCAACAATGCAAATACAAGAAATCGTTTAGCCGATATCACAAATGGATTATGGAAGAGGAGAGCAACTCTAATTTGGCAAATCAAAGCGCCACCCCTAAGAGCAAAGTTTGCCTGTATGCCGGAAACTTATTCATAA
Protein sequence

>MsG0380017349.01.T01

MCVSLFKESLIESMGVGFAIGGRNKKNWRFLDEKEKSLEEVQNHIQVLKSDIAGKDAEVAQMKVHISELNLNAKEQAIEYKEKSRSMQRKAREEVRSILEEQEKLSNELDEKMRKLDTWSRDLNKREVLTDQERQKLEEDKKKDTDQFVMASQLKSTGFNIAFAAVAEISEPILRGAEANGLILASVVMCLMFAFDKFDFQDEWISPRHSEIGYGAVNSHVKSSKCTKVSSTSVDQRHKCNNANTRNRLADITNGLWKRRATLIWQIKAPPLRAKFACMPETYS*