Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018425.01.T01 | XP_013454707.1 | 92.504 | 587 | 44 | 0 | 1 | 587 | 1 | 587 | 0 | 1037 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018425.01.T01 | Q9CAC4 | 56.044 | 91 | 40 | 0 | 281 | 371 | 420 | 510 | 3.03E-21 | 101 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018425.01.T01 | A0A072UHY6 | 92.504 | 587 | 44 | 0 | 1 | 587 | 1 | 587 | 0.0 | 1037 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047869.01 | MsG0480018425.01 | 0.824807 | 6.606034e-54 | 5.914517e-51 |
| MsG0080048382.01 | MsG0480018425.01 | 0.801429 | 9.042344e-49 | 4.317245e-46 |
| MsG0080048618.01 | MsG0480018425.01 | 0.807651 | 4.555575e-50 | 2.551371e-47 |
| MsG0180000503.01 | MsG0480018425.01 | 0.824618 | 7.320827e-54 | 6.519096e-51 |
| MsG0180000679.01 | MsG0480018425.01 | 0.804466 | 2.131776e-49 | 1.099905e-46 |
| MsG0180001063.01 | MsG0480018425.01 | 0.857329 | 1.758293e-62 | 4.323518e-59 |
| MsG0180002842.01 | MsG0480018425.01 | 0.807448 | 5.030160e-50 | 2.802468e-47 |
| MsG0180003864.01 | MsG0480018425.01 | 0.802840 | 4.635854e-49 | 2.294338e-46 |
| MsG0180003952.01 | MsG0480018425.01 | 0.820898 | 5.378374e-53 | 4.310457e-50 |
| MsG0180004389.01 | MsG0480018425.01 | 0.810541 | 1.095222e-50 | 6.619687e-48 |
| MsG0180004426.01 | MsG0480018425.01 | 0.800709 | 1.268809e-48 | 5.948439e-46 |
| MsG0180004996.01 | MsG0480018425.01 | 0.803178 | 3.945403e-49 | 1.969488e-46 |
| MsG0180005799.01 | MsG0480018425.01 | 0.818500 | 1.898067e-52 | 1.423209e-49 |
| MsG0180005842.01 | MsG0480018425.01 | 0.805069 | 1.594998e-49 | 8.358826e-47 |
| MsG0180005982.01 | MsG0480018425.01 | 0.808268 | 3.366979e-50 | 1.916666e-47 |
| MsG0180006261.01 | MsG0480018425.01 | 0.813768 | 2.165634e-51 | 1.426903e-48 |
| MsG0280006299.01 | MsG0480018425.01 | 0.842820 | 2.047522e-58 | 3.141588e-55 |
| MsG0280006407.01 | MsG0480018425.01 | 0.837822 | 4.142361e-57 | 5.445289e-54 |
| MsG0280010586.01 | MsG0480018425.01 | 0.809195 | 2.133574e-50 | 1.244640e-47 |
| MsG0280010722.01 | MsG0480018425.01 | 0.840035 | 1.107890e-57 | 1.558763e-54 |
| MsG0280011086.01 | MsG0480018425.01 | 0.811238 | 7.738325e-51 | 4.764762e-48 |
| MsG0280011175.01 | MsG0480018425.01 | 0.820440 | 6.850040e-53 | 5.420559e-50 |
| MsG0280011446.01 | MsG0480018425.01 | 0.805207 | 1.491989e-49 | 7.846755e-47 |
| MsG0380011494.01 | MsG0480018425.01 | 0.824953 | 6.103341e-54 | 5.487086e-51 |
| MsG0380011609.01 | MsG0480018425.01 | 0.840669 | 7.565721e-58 | 1.085411e-54 |
| MsG0380012330.01 | MsG0480018425.01 | 0.802375 | 5.781151e-49 | 2.827479e-46 |
| MsG0380014139.01 | MsG0480018425.01 | 0.837772 | 4.267631e-57 | 5.601555e-54 |
| MsG0380014173.01 | MsG0480018425.01 | 0.835271 | 1.849509e-56 | 2.250600e-53 |
| MsG0380014277.01 | MsG0480018425.01 | 0.810475 | 1.131836e-50 | 6.829254e-48 |
| MsG0380014537.01 | MsG0480018425.01 | 0.824518 | 7.728142e-54 | 6.861205e-51 |
| MsG0380015555.01 | MsG0480018425.01 | 0.806739 | 7.106930e-50 | 3.887316e-47 |
| MsG0380015566.01 | MsG0480018425.01 | 0.855680 | 5.362151e-62 | 1.248036e-58 |
| MsG0380015720.01 | MsG0480018425.01 | 0.801819 | 7.519790e-49 | 3.626028e-46 |
| MsG0380015778.01 | MsG0480018425.01 | 0.808394 | 3.165085e-50 | 1.807668e-47 |
| MsG0380016285.01 | MsG0480018425.01 | 0.850681 | 1.450707e-60 | 2.864293e-57 |
| MsG0380017543.01 | MsG0480018425.01 | 0.842458 | 2.553961e-58 | 3.875193e-55 |
| MsG0480018425.01 | MsG0480018659.01 | 0.828464 | 8.858695e-55 | 8.812089e-52 |
| MsG0480018425.01 | MsG0480018660.01 | 0.842104 | 3.169268e-58 | 4.755322e-55 |
| MsG0480018425.01 | MsG0480019125.01 | 0.803754 | 2.997716e-49 | 1.518709e-46 |
| MsG0480018425.01 | MsG0480020002.01 | 0.800748 | 1.246231e-48 | 5.848434e-46 |
| MsG0480018425.01 | MsG0480021536.01 | 0.800717 | 1.264034e-48 | 5.927385e-46 |
| MsG0480018425.01 | MsG0480021558.01 | 0.852089 | 5.801618e-61 | 1.198953e-57 |
| MsG0480018425.01 | MsG0480021959.01 | 0.846659 | 1.890750e-59 | 3.277919e-56 |
| MsG0480018425.01 | MsG0480022259.01 | 0.818769 | 1.648778e-52 | 1.245524e-49 |
| MsG0480018425.01 | MsG0480022262.01 | 0.816995 | 4.148772e-52 | 2.985079e-49 |
| MsG0480018425.01 | MsG0480022795.01 | 0.824118 | 9.597164e-54 | 8.423405e-51 |
| MsG0480018425.01 | MsG0480023636.01 | 0.818900 | 1.539600e-52 | 1.167324e-49 |
| MsG0480018425.01 | MsG0580027031.01 | 0.833171 | 6.215673e-56 | 7.101443e-53 |
| MsG0480018425.01 | MsG0580027766.01 | 0.809985 | 1.443225e-50 | 8.597395e-48 |
| MsG0480018425.01 | MsG0680030316.01 | 0.809735 | 1.633573e-50 | 9.667497e-48 |
| MsG0480018425.01 | MsG0680030413.01 | 0.804773 | 1.839184e-49 | 9.565402e-47 |
| MsG0480018425.01 | MsG0680030560.01 | 0.807493 | 4.919973e-50 | 2.744329e-47 |
| MsG0480018425.01 | MsG0680031087.01 | 0.805136 | 1.544329e-49 | 8.107288e-47 |
| MsG0480018425.01 | MsG0680035694.01 | 0.817757 | 2.793810e-52 | 2.052546e-49 |
| MsG0480018425.01 | MsG0680035909.01 | 0.859799 | 3.222119e-63 | 8.616121e-60 |
| MsG0480018425.01 | MsG0780039144.01 | 0.834991 | 2.175776e-56 | 2.625194e-53 |
| MsG0480018425.01 | MsG0780039808.01 | 0.818532 | 1.865897e-52 | 1.400357e-49 |
| MsG0480018425.01 | MsG0780040604.01 | 0.802910 | 4.482915e-49 | 2.222564e-46 |
| MsG0480018425.01 | MsG0780040858.01 | 0.812644 | 3.821041e-51 | 2.442761e-48 |
| MsG0480018425.01 | MsG0780041416.01 | 0.802775 | 4.779617e-49 | 2.361601e-46 |
| MsG0480018425.01 | MsG0780041456.01 | 0.821180 | 4.631079e-53 | 3.740865e-50 |
| MsG0480018425.01 | MsG0880041836.01 | 0.820426 | 6.902716e-53 | 5.460202e-50 |
| MsG0480018425.01 | MsG0880041843.01 | 0.810209 | 1.291755e-50 | 7.739254e-48 |
| MsG0480018425.01 | MsG0880044455.01 | -0.820071 | 8.322646e-53 | 6.519293e-50 |
| MsG0480018425.01 | MsG0880045111.01 | 0.808357 | 3.222370e-50 | 1.838678e-47 |
| MsG0480018425.01 | MsG0880045555.01 | -0.863608 | 2.204761e-64 | 6.723412e-61 |
| MsG0480018425.01 | MsG0880045736.01 | 0.827937 | 1.187275e-54 | 1.162979e-51 |
| MsG0480018425.01 | MsG0880045896.01 | 0.815050 | 1.127473e-51 | 7.690990e-49 |
| MsG0480018425.01 | MsG0880045937.01 | 0.849825 | 2.521767e-60 | 4.841134e-57 |
| MsG0480018425.01 | MsG0880046042.01 | 0.804070 | 2.576902e-49 | 1.316219e-46 |
| MsG0480018425.01 | MsG0880046995.01 | 0.818575 | 1.824640e-52 | 1.370961e-49 |
| MsG0280007023.01 | MsG0480018425.01 | 0.826355 | 2.838897e-54 | 2.656174e-51 |
| MsG0280007058.01 | MsG0480018425.01 | -0.869574 | 2.795314e-66 | 1.054217e-62 |
| MsG0280007955.01 | MsG0480018425.01 | 0.803955 | 2.722696e-49 | 1.386589e-46 |
| MsG0280009395.01 | MsG0480018425.01 | -0.804671 | 1.931632e-49 | 1.001949e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018425.01.T01 | MTR_4g011550 | 92.504 | 587 | 44 | 0 | 1 | 587 | 1 | 587 | 0.0 | 1037 |
| MsG0480018425.01.T01 | MTR_4g011540 | 67.404 | 497 | 114 | 6 | 1 | 484 | 1 | 462 | 0.0 | 587 |
| MsG0480018425.01.T01 | MTR_1g070350 | 41.667 | 132 | 72 | 2 | 239 | 370 | 500 | 626 | 7.40e-18 | 88.2 |
| MsG0480018425.01.T01 | MTR_5g078300 | 45.570 | 79 | 43 | 0 | 274 | 352 | 617 | 695 | 5.03e-15 | 79.3 |
| MsG0480018425.01.T01 | MTR_0168s0060 | 40.299 | 134 | 74 | 3 | 240 | 370 | 297 | 427 | 1.76e-13 | 73.6 |
| MsG0480018425.01.T01 | MTR_4g093150 | 43.678 | 87 | 45 | 1 | 285 | 371 | 88 | 170 | 2.51e-13 | 69.7 |
| MsG0480018425.01.T01 | MTR_7g107000 | 42.708 | 96 | 55 | 0 | 280 | 375 | 73 | 168 | 2.26e-12 | 70.1 |
| MsG0480018425.01.T01 | MTR_1g054835 | 41.558 | 77 | 45 | 0 | 299 | 375 | 87 | 163 | 9.49e-12 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018425.01.T01 | AT4G13630 | 32.302 | 582 | 279 | 24 | 1 | 528 | 1 | 521 | 1.44e-50 | 184 |
| MsG0480018425.01.T01 | AT4G13630 | 32.302 | 582 | 279 | 24 | 1 | 528 | 1 | 521 | 1.44e-50 | 184 |
| MsG0480018425.01.T01 | AT1G04890 | 31.026 | 419 | 200 | 11 | 149 | 524 | 7 | 379 | 3.38e-27 | 114 |
| MsG0480018425.01.T01 | AT4G13160 | 62.626 | 99 | 37 | 0 | 274 | 372 | 114 | 212 | 6.40e-23 | 99.4 |
| MsG0480018425.01.T01 | AT4G13160 | 35.955 | 89 | 48 | 2 | 1 | 89 | 1 | 80 | 9.10e-11 | 63.5 |
| MsG0480018425.01.T01 | AT1G70750 | 56.044 | 91 | 40 | 0 | 281 | 371 | 420 | 510 | 3.09e-22 | 101 |
| MsG0480018425.01.T01 | AT5G16720 | 49.425 | 87 | 44 | 0 | 284 | 370 | 367 | 453 | 7.24e-19 | 90.9 |
| MsG0480018425.01.T01 | AT3G54740 | 28.319 | 339 | 190 | 12 | 280 | 582 | 77 | 398 | 1.76e-16 | 82.4 |
| MsG0480018425.01.T01 | AT3G54740 | 28.319 | 339 | 190 | 12 | 280 | 582 | 77 | 398 | 1.76e-16 | 82.4 |
| MsG0480018425.01.T01 | AT3G54740 | 28.319 | 339 | 190 | 12 | 280 | 582 | 77 | 398 | 1.76e-16 | 82.4 |
| MsG0480018425.01.T01 | AT3G54740 | 28.319 | 339 | 190 | 12 | 280 | 582 | 77 | 398 | 1.76e-16 | 82.4 |
| MsG0480018425.01.T01 | AT3G54740 | 28.981 | 314 | 170 | 12 | 280 | 557 | 29 | 325 | 2.19e-16 | 82.0 |
| MsG0480018425.01.T01 | AT3G54740 | 28.981 | 314 | 170 | 12 | 280 | 557 | 29 | 325 | 2.19e-16 | 82.0 |
| MsG0480018425.01.T01 | AT3G54740 | 28.981 | 314 | 170 | 12 | 280 | 557 | 29 | 325 | 2.19e-16 | 82.0 |
| MsG0480018425.01.T01 | AT3G54740 | 28.981 | 314 | 170 | 12 | 280 | 557 | 29 | 325 | 2.19e-16 | 82.0 |
| MsG0480018425.01.T01 | AT1G08800 | 50.000 | 82 | 41 | 0 | 289 | 370 | 905 | 986 | 7.13e-15 | 79.0 |
| MsG0480018425.01.T01 | AT1G08800 | 50.000 | 82 | 41 | 0 | 289 | 370 | 905 | 986 | 7.13e-15 | 79.0 |
| MsG0480018425.01.T01 | AT1G08800 | 50.000 | 82 | 41 | 0 | 289 | 370 | 905 | 986 | 7.13e-15 | 79.0 |
| MsG0480018425.01.T01 | AT1G08800 | 50.000 | 82 | 41 | 0 | 289 | 370 | 905 | 986 | 7.13e-15 | 79.0 |
| MsG0480018425.01.T01 | AT1G74830 | 51.852 | 81 | 39 | 0 | 291 | 371 | 319 | 399 | 8.94e-15 | 77.8 |
| MsG0480018425.01.T01 | AT5G06560 | 34.286 | 105 | 69 | 0 | 271 | 375 | 68 | 172 | 1.68e-13 | 73.6 |
| MsG0480018425.01.T01 | AT2G30690 | 41.000 | 100 | 59 | 0 | 271 | 370 | 610 | 709 | 1.93e-13 | 73.9 |
| MsG0480018425.01.T01 | AT2G30690 | 41.000 | 100 | 59 | 0 | 271 | 370 | 610 | 709 | 1.93e-13 | 73.9 |
| MsG0480018425.01.T01 | AT2G24140 | 32.990 | 194 | 105 | 5 | 294 | 477 | 36 | 214 | 3.48e-11 | 65.5 |
| MsG0480018425.01.T01 | AT2G24140 | 32.990 | 194 | 105 | 5 | 294 | 477 | 36 | 214 | 3.48e-11 | 65.5 |
Find 130 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTCATGTTCTGTATTAT+TGG | 0.085086 | 4:+4740762 | None:intergenic |
| TATTGTTTGAGTTGCCTTTA+AGG | 0.172262 | 4:-4742484 | MsG0480018425.01.T01:CDS |
| ATGGAACATATCTTCCTTAA+AGG | 0.186656 | 4:+4742470 | None:intergenic |
| ATAATAAGTTGTATACAATT+TGG | 0.229269 | 4:-4739246 | MsG0480018425.01.T01:three_prime_UTR |
| TTCAGAAAATTAAACAATTA+AGG | 0.230060 | 4:-4740384 | MsG0480018425.01.T01:CDS |
| ACACAATATACTTGTGAATT+AGG | 0.241643 | 4:+4739375 | None:intergenic |
| TAAAGGTCAGTTGAAGCTTT+TGG | 0.264947 | 4:-4740425 | MsG0480018425.01.T01:CDS |
| AAAAGGAACTTGAAAGTTAT+AGG | 0.286233 | 4:-4740936 | MsG0480018425.01.T01:CDS |
| GAAATTCATTCATGGAGTTT+AGG | 0.291053 | 4:-4742674 | MsG0480018425.01.T01:CDS |
| ATCAACATTGTTGTCATATT+CGG | 0.301930 | 4:+4740618 | None:intergenic |
| TGGAGTTTAGGAGAAATTAT+TGG | 0.302605 | 4:-4742662 | MsG0480018425.01.T01:CDS |
| CAAGAAAATGTTGAGATTGT+TGG | 0.304812 | 4:-4741243 | MsG0480018425.01.T01:CDS |
| TGATAATAGGATTGTTGAAT+TGG | 0.314674 | 4:-4742333 | MsG0480018425.01.T01:CDS |
| GATAATGAGATTGAAGTTCT+TGG | 0.316265 | 4:-4740517 | MsG0480018425.01.T01:CDS |
| ATCAGACTCAGTATCATAAA+AGG | 0.329427 | 4:+4740687 | None:intergenic |
| AACAACAATGTTGTTCTCAT+TGG | 0.345249 | 4:+4742376 | None:intergenic |
| TCACCGGACTTGTCATGATT+TGG | 0.346763 | 4:-4741346 | MsG0480018425.01.T01:CDS |
| CAGGAACTCGGCGGAGGAAG+AGG | 0.355859 | 4:-4742208 | MsG0480018425.01.T01:CDS |
| ACAAAACATAAGCTATAAAA+AGG | 0.365579 | 4:+4742627 | None:intergenic |
| CAGAGCATAAATCCTGCTTC+AGG | 0.377459 | 4:-4742062 | MsG0480018425.01.T01:CDS |
| CTTCAATTCATTGTTGATTG+AGG | 0.381613 | 4:-4742837 | MsG0480018425.01.T01:five_prime_UTR |
| TATCATGCTTTGAAGGGAAA+AGG | 0.388432 | 4:+4743061 | None:intergenic |
| GAAGATGAGAGTTCGTGTTC+AGG | 0.396843 | 4:-4742311 | MsG0480018425.01.T01:CDS |
| ACTTATTATTATGAATGAAA+TGG | 0.397813 | 4:+4739260 | None:intergenic |
| TGCAAGAGATTCTTATAAGA+AGG | 0.403540 | 4:-4740981 | MsG0480018425.01.T01:CDS |
| GGAGAAAGCGTCAATGGAAA+TGG | 0.405001 | 4:-4741070 | MsG0480018425.01.T01:CDS |
| GTACAATCTTGCTTAACATT+AGG | 0.407788 | 4:+4740784 | None:intergenic |
| ATCTCAACATGCATAATATC+AGG | 0.417289 | 4:+4742729 | None:intergenic |
| GAATATGACAACAATGTTGA+TGG | 0.419060 | 4:-4740616 | MsG0480018425.01.T01:CDS |
| CTTCGCCGCCATTACTTGAA+TGG | 0.421770 | 4:+4742451 | None:intergenic |
| CGTGTTTAGTTCATAATGAA+AGG | 0.437107 | 4:-4740549 | MsG0480018425.01.T01:CDS |
| ATTAAATTCATAACTGTGAC+AGG | 0.437254 | 4:+4741314 | None:intergenic |
| GATTCTTATAAGAAGGGAAA+AGG | 0.439083 | 4:-4740974 | MsG0480018425.01.T01:CDS |
| AACTTAGTATCATGCTTTGA+AGG | 0.448487 | 4:+4743054 | None:intergenic |
| TCTTCATAGCCAAGCATCCT+TGG | 0.449615 | 4:-4739588 | MsG0480018425.01.T01:three_prime_UTR |
| TACAAGTTGCCAAGGATGCT+TGG | 0.450984 | 4:+4739579 | None:intergenic |
| AGTGTATTGAATAGAACAAA+AGG | 0.452894 | 4:+4742962 | None:intergenic |
| ATGACCATGCTTTCAGAGAA+AGG | 0.454968 | 4:-4740457 | MsG0480018425.01.T01:CDS |
| TTCACCCAAACCAAATCAAA+AGG | 0.454988 | 4:+4742422 | None:intergenic |
| TGCTGCTCTTTATCTAGAGC+TGG | 0.455714 | 4:-4741160 | MsG0480018425.01.T01:CDS |
| AGGCTGCCAAAGTGTGTCTT+GGG | 0.456575 | 4:-4739673 | MsG0480018425.01.T01:CDS |
| GAGAAAGGAGAAAATGATAA+AGG | 0.461542 | 4:-4740442 | MsG0480018425.01.T01:CDS |
| GTTTGCTTTCGTTAGTAGAC+AGG | 0.463294 | 4:-4742283 | MsG0480018425.01.T01:CDS |
| GATTTGGTTTGGGTGAAGAA+AGG | 0.472052 | 4:-4742416 | MsG0480018425.01.T01:CDS |
| TTCTCCTTTCTCTGAAAGCA+TGG | 0.472703 | 4:+4740453 | None:intergenic |
| ATCATGCTTTGAAGGGAAAA+GGG | 0.472913 | 4:+4743062 | None:intergenic |
| AGTCCTTGCTTGCCTTGTGA+TGG | 0.476868 | 4:-4742116 | MsG0480018425.01.T01:CDS |
| CTAACTTCTTTCCCTGAAGC+AGG | 0.482888 | 4:+4742050 | None:intergenic |
| CAGAGGTGCGGCTTAGTGAA+TGG | 0.486827 | 4:-4740870 | MsG0480018425.01.T01:CDS |
| CGTCCAAATCATGACAAGTC+CGG | 0.490565 | 4:+4741343 | None:intergenic |
| AGATTGAAGTTCTTGGAGAA+AGG | 0.491126 | 4:-4740510 | MsG0480018425.01.T01:CDS |
| AGGAACTCGGCGGAGGAAGA+GGG | 0.493036 | 4:-4742207 | MsG0480018425.01.T01:CDS |
| CTCGAATATATTCCTTGTCC+TGG | 0.496219 | 4:+4741273 | None:intergenic |
| CTATAGAAGAAATTCATTCA+TGG | 0.496751 | 4:-4742682 | MsG0480018425.01.T01:CDS |
| TAGTTCATAATGAAAGGGTA+AGG | 0.498172 | 4:-4740543 | MsG0480018425.01.T01:CDS |
| TTGAGTTTGAAACGTAGGTC+AGG | 0.499357 | 4:-4742227 | MsG0480018425.01.T01:CDS |
| GCAAGAGGAGAAAGCGTCAA+TGG | 0.499562 | 4:-4741076 | MsG0480018425.01.T01:CDS |
| AATATACTTGTGAATTAGGT+GGG | 0.506310 | 4:+4739379 | None:intergenic |
| TTGAAAAGCATGAAAGGAAT+GGG | 0.507138 | 4:-4739412 | MsG0480018425.01.T01:three_prime_UTR |
| GACTGAATGCAACATCAGAC+TGG | 0.508899 | 4:+4742135 | None:intergenic |
| GAGGCTGCCAAAGTGTGTCT+TGG | 0.510501 | 4:-4739674 | MsG0480018425.01.T01:CDS |
| ACAAAGATTTAGATCAAAGT+AGG | 0.510880 | 4:+4742991 | None:intergenic |
| GCAAGAGATTCTTATAAGAA+GGG | 0.513797 | 4:-4740980 | MsG0480018425.01.T01:CDS |
| GGCAACGATGCGCCACGTGC+GGG | 0.514906 | 4:+4740358 | None:intergenic |
| GTTGAAAAGCATGAAAGGAA+TGG | 0.516207 | 4:-4739413 | MsG0480018425.01.T01:three_prime_UTR |
| TATTCGGTCTTGCTTGCACA+TGG | 0.519169 | 4:+4740634 | None:intergenic |
| CAGGTAAGGGAGAGGAAAAG+AGG | 0.520604 | 4:-4739693 | MsG0480018425.01.T01:CDS |
| TCATATGTTTCAAATGAAAG+TGG | 0.523317 | 4:+4740835 | None:intergenic |
| GATACGATGCAAAGGGGAAG+AGG | 0.524159 | 4:-4742253 | MsG0480018425.01.T01:CDS |
| GAATCACTTTCAGAATCAAA+AGG | 0.526180 | 4:+4740574 | None:intergenic |
| TTGTCTCCCAAGACACACTT+TGG | 0.529389 | 4:+4739667 | None:intergenic |
| CTTCCATCACAAGGCAAGCA+AGG | 0.530174 | 4:+4742113 | None:intergenic |
| GACAGAGGATACGATGCAAA+GGG | 0.530652 | 4:-4742260 | MsG0480018425.01.T01:CDS |
| GTGTTTAGTTCATAATGAAA+GGG | 0.540649 | 4:-4740548 | MsG0480018425.01.T01:CDS |
| CAATATACTTGTGAATTAGG+TGG | 0.543261 | 4:+4739378 | None:intergenic |
| GGGCAACGATGCGCCACGTG+CGG | 0.543409 | 4:+4740357 | None:intergenic |
| ACTTAGTATCATGCTTTGAA+GGG | 0.544451 | 4:+4743055 | None:intergenic |
| TACTGCCGCTGACGAAGCCA+TGG | 0.544720 | 4:-4741115 | MsG0480018425.01.T01:CDS |
| TAATACAGAACATGAAGAGT+TGG | 0.549524 | 4:-4740758 | MsG0480018425.01.T01:CDS |
| TCTTGGAGAAAGGCTGAAGA+TGG | 0.549792 | 4:-4740500 | MsG0480018425.01.T01:CDS |
| GAACTCGGCGGAGGAAGAGG+GGG | 0.552875 | 4:-4742205 | MsG0480018425.01.T01:CDS |
| AACAAGAAGAAGAACAGTGA+TGG | 0.553036 | 4:+4743097 | None:intergenic |
| GGAACTCGGCGGAGGAAGAG+GGG | 0.560698 | 4:-4742206 | MsG0480018425.01.T01:CDS |
| GCATCAACGGTTGAAAGTCC+AGG | 0.561291 | 4:-4741291 | MsG0480018425.01.T01:CDS |
| TTATGAATTTAATGCATCAA+CGG | 0.561998 | 4:-4741304 | MsG0480018425.01.T01:CDS |
| GATATGTTCCATTCAAGTAA+TGG | 0.573825 | 4:-4742459 | MsG0480018425.01.T01:CDS |
| TACCCTAAAATCCCTTTGCA+AGG | 0.574945 | 4:+4742536 | None:intergenic |
| AGAGCATAAATCCTGCTTCA+GGG | 0.576648 | 4:-4742061 | MsG0480018425.01.T01:CDS |
| TGAAACGTAGGTCAGGAACT+CGG | 0.583045 | 4:-4742220 | MsG0480018425.01.T01:CDS |
| CATAGCCATGGCTTCGTCAG+CGG | 0.583914 | 4:+4741110 | None:intergenic |
| GTAGGTCAGGAACTCGGCGG+AGG | 0.584886 | 4:-4742214 | MsG0480018425.01.T01:CDS |
| GGAAGCTATACCTTAGTCCA+TGG | 0.588992 | 4:+4740331 | None:intergenic |
| ATGGCATTTACAAGTTGCCA+AGG | 0.590711 | 4:+4739571 | None:intergenic |
| TTCAAGTAATGGCGGCGAAG+AGG | 0.592155 | 4:-4742448 | MsG0480018425.01.T01:CDS |
| AAAATCCCTTTGCAAGGACA+AGG | 0.592904 | 4:+4742542 | None:intergenic |
| TATGATATCGCGTCTGCAAG+AGG | 0.594932 | 4:-4741091 | MsG0480018425.01.T01:CDS |
| TCAAACATACAACAAGGCTA+AGG | 0.605976 | 4:+4739508 | None:intergenic |
| GGACAGAGGATACGATGCAA+AGG | 0.610242 | 4:-4742261 | MsG0480018425.01.T01:CDS |
| TTGGCAACTTGTAAATGCCA+TGG | 0.610446 | 4:-4739569 | MsG0480018425.01.T01:three_prime_UTR |
| AAAGTGCTTTCTGTCTGCGA+TGG | 0.612683 | 4:+4740808 | None:intergenic |
| ACATACAACAAGGCTAAGGA+AGG | 0.613816 | 4:+4739512 | None:intergenic |
| ATTTAGACGATGAAGATCAC+CGG | 0.618034 | 4:-4741362 | MsG0480018425.01.T01:intron |
| GCTATACCTTAGTCCATGGA+GGG | 0.618166 | 4:+4740335 | None:intergenic |
| TTTGCTTTCGTTAGTAGACA+GGG | 0.620119 | 4:-4742282 | MsG0480018425.01.T01:CDS |
| GATGTCCATGTTATTGATGA+CGG | 0.620528 | 4:-4740658 | MsG0480018425.01.T01:CDS |
| ATACTGCTGCTTCCATCACA+AGG | 0.622820 | 4:+4742104 | None:intergenic |
| CAATTAAGGAATCCCGCACG+TGG | 0.623907 | 4:-4740370 | MsG0480018425.01.T01:CDS |
| TCTACTAACGAAAGCAAACG+CGG | 0.624552 | 4:+4742287 | None:intergenic |
| CAGACGCGATATCATAGCCA+TGG | 0.625045 | 4:+4741098 | None:intergenic |
| ATTCAAAGTCAGCAGAGGTG+CGG | 0.630510 | 4:-4740882 | MsG0480018425.01.T01:CDS |
| ATACGATGCAAAGGGGAAGA+GGG | 0.630765 | 4:-4742252 | MsG0480018425.01.T01:CDS |
| ATGGACCGTCATCAATAACA+TGG | 0.633739 | 4:+4740653 | None:intergenic |
| TATACCTTAGTCCATGGAGG+GGG | 0.637272 | 4:+4740337 | None:intergenic |
| GCTACAAGAGGTATTTGCCA+TGG | 0.637724 | 4:+4739552 | None:intergenic |
| CTATACCTTAGTCCATGGAG+GGG | 0.646902 | 4:+4740336 | None:intergenic |
| AGCTATACCTTAGTCCATGG+AGG | 0.650933 | 4:+4740334 | None:intergenic |
| ACGGTTGAAAGTCCAGGACA+AGG | 0.655015 | 4:-4741285 | MsG0480018425.01.T01:CDS |
| GTTGCATTCAAAGTCAGCAG+AGG | 0.656417 | 4:-4740887 | MsG0480018425.01.T01:CDS |
| ATATACTTGTGAATTAGGTG+GGG | 0.657030 | 4:+4739380 | None:intergenic |
| GAAGGAGTGATGAATTCTAG+AGG | 0.661602 | 4:+4739530 | None:intergenic |
| ATGCTTGGCTATGAAGACAA+AGG | 0.663753 | 4:+4739594 | None:intergenic |
| TCTTTATCTAGAGCTGGAGA+AGG | 0.665408 | 4:-4741154 | MsG0480018425.01.T01:CDS |
| ATGTTCCATTCAAGTAATGG+CGG | 0.669995 | 4:-4742456 | MsG0480018425.01.T01:CDS |
| GGCTTAGTGAATGGAAACGA+AGG | 0.670882 | 4:-4740861 | MsG0480018425.01.T01:CDS |
| TCGTTAGTAGACAGGGACAG+AGG | 0.672334 | 4:-4742275 | MsG0480018425.01.T01:CDS |
| TGGAAATGAGACAATACGAG+AGG | 0.675395 | 4:-4741050 | MsG0480018425.01.T01:CDS |
| TGAATTCTAGAGGCTACAAG+AGG | 0.689400 | 4:+4739540 | None:intergenic |
| TTGTTCTCAAACATACAACA+AGG | 0.701698 | 4:+4739502 | None:intergenic |
| ACAGAGGATACGATGCAAAG+GGG | 0.723117 | 4:-4742259 | MsG0480018425.01.T01:CDS |
| AACGTAGGTCAGGAACTCGG+CGG | 0.782967 | 4:-4742217 | MsG0480018425.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTTATTATTATGAATGAAA+TGG | + | Chr4:4743164-4743183 | None:intergenic | 15.0% |
| !! | ATAATAAGTTGTATACAATT+TGG | - | Chr4:4743175-4743194 | MsG0480018425.01.T01:five_prime_UTR | 15.0% |
| !! | TAATAAGTTGTATACAATTT+GGG | - | Chr4:4743176-4743195 | MsG0480018425.01.T01:five_prime_UTR | 15.0% |
| !! | TTCAGAAAATTAAACAATTA+AGG | - | Chr4:4742037-4742056 | MsG0480018425.01.T01:intron | 15.0% |
| !!! | TATTGTTATTTTATGAATAC+CGG | - | Chr4:4740989-4741008 | MsG0480018425.01.T01:CDS | 15.0% |
| !! | AAGAAAAAACAAGTGATAAT+AGG | - | Chr4:4740075-4740094 | MsG0480018425.01.T01:intron | 20.0% |
| !! | AATAACCAAGTTAAAACTAA+AGG | + | Chr4:4741025-4741044 | None:intergenic | 20.0% |
| !! | AATAAGTTGTATACAATTTG+GGG | - | Chr4:4743177-4743196 | MsG0480018425.01.T01:five_prime_UTR | 20.0% |
| !! | ACAAAACATAAGCTATAAAA+AGG | + | Chr4:4739797-4739816 | None:intergenic | 20.0% |
| !! | ACTTATCATATAAGTGTTTA+TGG | + | Chr4:4742604-4742623 | None:intergenic | 20.0% |
| !! | ATTGATATGATGAACAAAAA+AGG | + | Chr4:4740459-4740478 | None:intergenic | 20.0% |
| !! | TTATGAATTTAATGCATCAA+CGG | - | Chr4:4741117-4741136 | MsG0480018425.01.T01:CDS | 20.0% |
| !!! | AAGTTTAGTTTTTTTCTTGT+TGG | - | Chr4:4739536-4739555 | MsG0480018425.01.T01:three_prime_UTR | 20.0% |
| !!! | AGTTTAGTTTTTTTCTTGTT+GGG | - | Chr4:4739537-4739556 | MsG0480018425.01.T01:three_prime_UTR | 20.0% |
| !!! | ATTGTTTAATTTTCTGAAGA+CGG | + | Chr4:4742035-4742054 | None:intergenic | 20.0% |
| !!! | TTCAAATTGTTTAGGTTTTT+TGG | - | Chr4:4739846-4739865 | MsG0480018425.01.T01:intron | 20.0% |
| !!! | TTTTTGCTTTCAAATTGTTT+AGG | - | Chr4:4739838-4739857 | MsG0480018425.01.T01:intron | 20.0% |
| ! | AAAAGGAACTTGAAAGTTAT+AGG | - | Chr4:4741485-4741504 | MsG0480018425.01.T01:intron | 25.0% |
| ! | AAAATCTAGGAATCATTTAC+CGG | + | Chr4:4740583-4740602 | None:intergenic | 25.0% |
| ! | AATATACTTGTGAATTAGGT+GGG | + | Chr4:4743045-4743064 | None:intergenic | 25.0% |
| ! | AATGGAGATAGAAAACAAAT+TGG | + | Chr4:4742114-4742133 | None:intergenic | 25.0% |
| ! | ACAAAGATTTAGATCAAAGT+AGG | + | Chr4:4739433-4739452 | None:intergenic | 25.0% |
| ! | ACACAATATACTTGTGAATT+AGG | + | Chr4:4743049-4743068 | None:intergenic | 25.0% |
| ! | ACATCTCAATTAAACACTTA+TGG | + | Chr4:4742634-4742653 | None:intergenic | 25.0% |
| ! | AGCTATAAAAAGGTCAATAT+AGG | + | Chr4:4739787-4739806 | None:intergenic | 25.0% |
| ! | AGTGTATTGAATAGAACAAA+AGG | + | Chr4:4739462-4739481 | None:intergenic | 25.0% |
| ! | ATAAGTTGTATACAATTTGG+GGG | - | Chr4:4743178-4743197 | MsG0480018425.01.T01:five_prime_UTR | 25.0% |
| ! | ATCAACATTGTTGTCATATT+CGG | + | Chr4:4741806-4741825 | None:intergenic | 25.0% |
| ! | ATTAAATTCATAACTGTGAC+AGG | + | Chr4:4741110-4741129 | None:intergenic | 25.0% |
| ! | CTATAGAAGAAATTCATTCA+TGG | - | Chr4:4739739-4739758 | MsG0480018425.01.T01:intron | 25.0% |
| ! | GAGAAGGAAAAAATTGAATT+TGG | - | Chr4:4740811-4740830 | MsG0480018425.01.T01:CDS | 25.0% |
| ! | GAGTTATGATTATGGAAAAA+TGG | - | Chr4:4740238-4740257 | MsG0480018425.01.T01:intron | 25.0% |
| ! | GTTCGTGATGAAAATTTAAA+TGG | + | Chr4:4742132-4742151 | None:intergenic | 25.0% |
| ! | TCATATGTTTCAAATGAAAG+TGG | + | Chr4:4741589-4741608 | None:intergenic | 25.0% |
| ! | TGATAATAGGATTGTTGAAT+TGG | - | Chr4:4740088-4740107 | MsG0480018425.01.T01:intron | 25.0% |
| !! | AAATGATTCCTAGATTTTGA+AGG | - | Chr4:4740585-4740604 | MsG0480018425.01.T01:CDS | 25.0% |
| !! | AATGATTCCTAGATTTTGAA+GGG | - | Chr4:4740586-4740605 | MsG0480018425.01.T01:CDS | 25.0% |
| !! | GTGTTTAGTTCATAATGAAA+GGG | - | Chr4:4741873-4741892 | MsG0480018425.01.T01:intron | 25.0% |
| !! | TCAATTTGCACTAAAGTTTT+AGG | + | Chr4:4740929-4740948 | None:intergenic | 25.0% |
| !! | TCGGATCTATAATTATTTCT+AGG | - | Chr4:4742215-4742234 | MsG0480018425.01.T01:CDS | 25.0% |
| !! | TGAGATTTTGAGCTTTTTAT+AGG | - | Chr4:4739709-4739728 | MsG0480018425.01.T01:intron | 25.0% |
| !! | TGATTATGGAAAAATGGATT+CGG | - | Chr4:4740244-4740263 | MsG0480018425.01.T01:intron | 25.0% |
| !! | TGTAATATTTGACACCATTT+TGG | + | Chr4:4740711-4740730 | None:intergenic | 25.0% |
| !! | TTGAGCTTTTTATAGGAAAA+TGG | - | Chr4:4739716-4739735 | MsG0480018425.01.T01:intron | 25.0% |
| !! | TTTCATGCTTTTCAACAAAA+AGG | + | Chr4:4743004-4743023 | None:intergenic | 25.0% |
| !!! | AGAGTTTTTTAATTGTCATG+AGG | - | Chr4:4742798-4742817 | MsG0480018425.01.T01:five_prime_UTR | 25.0% |
| !!! | ATAGCGGTTTGTTTAAATTT+TGG | + | Chr4:4740754-4740773 | None:intergenic | 25.0% |
| !!! | ATAGCTTATGTTTTGTTATG+TGG | - | Chr4:4739801-4739820 | MsG0480018425.01.T01:intron | 25.0% |
| !!! | GGAGAATATCTTTTTAGAAA+AGG | - | Chr4:4741468-4741487 | MsG0480018425.01.T01:intron | 25.0% |
| !!! | TTTTTGTTGAAAAGCATGAA+AGG | - | Chr4:4743003-4743022 | MsG0480018425.01.T01:five_prime_UTR | 25.0% |
| AAAAAGGCAAAAGCAACAAA+TGG | + | Chr4:4742988-4743007 | None:intergenic | 30.0% | |
| AACAACAATGTTGTTCTCAT+TGG | + | Chr4:4740048-4740067 | None:intergenic | 30.0% | |
| AACTAAAGGCAGATAATATC+CGG | + | Chr4:4741011-4741030 | None:intergenic | 30.0% | |
| AACTTAGTATCATGCTTTGA+AGG | + | Chr4:4739370-4739389 | None:intergenic | 30.0% | |
| AGAAAGACAGACAGAATTAT+AGG | + | Chr4:4742447-4742466 | None:intergenic | 30.0% | |
| ATAATTCTGTCTGTCTTTCT+GGG | - | Chr4:4742447-4742466 | MsG0480018425.01.T01:CDS | 30.0% | |
| ATACGCTATTTAGTCCAAAA+TGG | - | Chr4:4740694-4740713 | MsG0480018425.01.T01:CDS | 30.0% | |
| ATATACTTGTGAATTAGGTG+GGG | + | Chr4:4743044-4743063 | None:intergenic | 30.0% | |
| ATCAGACTCAGTATCATAAA+AGG | + | Chr4:4741737-4741756 | None:intergenic | 30.0% | |
| ATCTCAACATGCATAATATC+AGG | + | Chr4:4739695-4739714 | None:intergenic | 30.0% | |
| ATGGAACATATCTTCCTTAA+AGG | + | Chr4:4739954-4739973 | None:intergenic | 30.0% | |
| CAAGAAAATGTTGAGATTGT+TGG | - | Chr4:4741178-4741197 | MsG0480018425.01.T01:CDS | 30.0% | |
| CAATATACTTGTGAATTAGG+TGG | + | Chr4:4743046-4743065 | None:intergenic | 30.0% | |
| CTCTTCATGTTCTGTATTAT+TGG | + | Chr4:4741662-4741681 | None:intergenic | 30.0% | |
| GAAATTCATTCATGGAGTTT+AGG | - | Chr4:4739747-4739766 | MsG0480018425.01.T01:intron | 30.0% | |
| GAATATGACAACAATGTTGA+TGG | - | Chr4:4741805-4741824 | MsG0480018425.01.T01:intron | 30.0% | |
| GAATCACTTTCAGAATCAAA+AGG | + | Chr4:4741850-4741869 | None:intergenic | 30.0% | |
| GAGAAAGGAGAAAATGATAA+AGG | - | Chr4:4741979-4741998 | MsG0480018425.01.T01:intron | 30.0% | |
| GATAATGAGATTGAAGTTCT+TGG | - | Chr4:4741904-4741923 | MsG0480018425.01.T01:intron | 30.0% | |
| GATATGTTCCATTCAAGTAA+TGG | - | Chr4:4739962-4739981 | MsG0480018425.01.T01:intron | 30.0% | |
| GATTCTTATAAGAAGGGAAA+AGG | - | Chr4:4741447-4741466 | MsG0480018425.01.T01:intron | 30.0% | |
| GCAAGAGATTCTTATAAGAA+GGG | - | Chr4:4741441-4741460 | MsG0480018425.01.T01:intron | 30.0% | |
| GGATAAAAACACTGAATACA+AGG | - | Chr4:4741684-4741703 | MsG0480018425.01.T01:intron | 30.0% | |
| GTACAATCTTGCTTAACATT+AGG | + | Chr4:4741640-4741659 | None:intergenic | 30.0% | |
| TAATACAGAACATGAAGAGT+TGG | - | Chr4:4741663-4741682 | MsG0480018425.01.T01:intron | 30.0% | |
| TAGTTCATAATGAAAGGGTA+AGG | - | Chr4:4741878-4741897 | MsG0480018425.01.T01:intron | 30.0% | |
| TATAAGCTGAAAACAGCTTA+TGG | + | Chr4:4742580-4742599 | None:intergenic | 30.0% | |
| TATAATTCTGTCTGTCTTTC+TGG | - | Chr4:4742446-4742465 | MsG0480018425.01.T01:CDS | 30.0% | |
| TCAACAAGTTGTGATTATAC+CGG | - | Chr4:4740561-4740580 | MsG0480018425.01.T01:CDS | 30.0% | |
| TCGCATTTCACATAAAATAG+CGG | + | Chr4:4740770-4740789 | None:intergenic | 30.0% | |
| TGAAAGAACGATAACTAAGT+GGG | + | Chr4:4740420-4740439 | None:intergenic | 30.0% | |
| TGCAAGAGATTCTTATAAGA+AGG | - | Chr4:4741440-4741459 | MsG0480018425.01.T01:intron | 30.0% | |
| TGGAGTTTAGGAGAAATTAT+TGG | - | Chr4:4739759-4739778 | MsG0480018425.01.T01:intron | 30.0% | |
| TTCTGTTTGAGTACAAATTC+TGG | - | Chr4:4742311-4742330 | MsG0480018425.01.T01:CDS | 30.0% | |
| TTGAAAGAACGATAACTAAG+TGG | + | Chr4:4740421-4740440 | None:intergenic | 30.0% | |
| TTGAGATGTTTACCCAAATA+AGG | - | Chr4:4742645-4742664 | MsG0480018425.01.T01:CDS | 30.0% | |
| TTGTTCTCAAACATACAACA+AGG | + | Chr4:4742922-4742941 | None:intergenic | 30.0% | |
| ! | AAAGTTCAGTTTTTGCTTGT+TGG | - | Chr4:4739625-4739644 | MsG0480018425.01.T01:three_prime_UTR | 30.0% |
| ! | AAGTTCAGTTTTTGCTTGTT+GGG | - | Chr4:4739626-4739645 | MsG0480018425.01.T01:three_prime_UTR | 30.0% |
| ! | ACTTAGTATCATGCTTTGAA+GGG | + | Chr4:4739369-4739388 | None:intergenic | 30.0% |
| ! | AGCAGAAATTATGCCTTATT+TGG | + | Chr4:4742661-4742680 | None:intergenic | 30.0% |
| ! | CGTGTTTAGTTCATAATGAA+AGG | - | Chr4:4741872-4741891 | MsG0480018425.01.T01:intron | 30.0% |
| ! | CTTCAATTCATTGTTGATTG+AGG | - | Chr4:4739584-4739603 | MsG0480018425.01.T01:three_prime_UTR | 30.0% |
| ! | TTGAAAAGCATGAAAGGAAT+GGG | - | Chr4:4743009-4743028 | MsG0480018425.01.T01:five_prime_UTR | 30.0% |
| !! | ATGATTCCTAGATTTTGAAG+GGG | - | Chr4:4740587-4740606 | MsG0480018425.01.T01:CDS | 30.0% |
| !! | GCAGAAATTATGCCTTATTT+GGG | + | Chr4:4742660-4742679 | None:intergenic | 30.0% |
| !! | TATTGTTTGAGTTGCCTTTA+AGG | - | Chr4:4739937-4739956 | MsG0480018425.01.T01:intron | 30.0% |
| !!! | AAATGACCAATTTTTTTCCC+AGG | - | Chr4:4742709-4742728 | MsG0480018425.01.T01:five_prime_UTR | 30.0% |
| !!! | ATCTGCCTTTAGTTTTAACT+TGG | - | Chr4:4741017-4741036 | MsG0480018425.01.T01:CDS | 30.0% |
| !!! | GTTTCCTTTTGATTTGGTTT+GGG | - | Chr4:4739995-4740014 | MsG0480018425.01.T01:intron | 30.0% |
| AACAAGAAGAAGAACAGTGA+TGG | + | Chr4:4739327-4739346 | None:intergenic | 35.0% | |
| AGAGCAGCATTGTTAAATAG+TGG | - | Chr4:4740633-4740652 | MsG0480018425.01.T01:CDS | 35.0% | |
| AGATTGAAGTTCTTGGAGAA+AGG | - | Chr4:4741911-4741930 | MsG0480018425.01.T01:intron | 35.0% | |
| ATGTTCCATTCAAGTAATGG+CGG | - | Chr4:4739965-4739984 | MsG0480018425.01.T01:intron | 35.0% | |
| ATTTAGACGATGAAGATCAC+CGG | - | Chr4:4741059-4741078 | MsG0480018425.01.T01:CDS | 35.0% | |
| GATGTCCATGTTATTGATGA+CGG | - | Chr4:4741763-4741782 | MsG0480018425.01.T01:intron | 35.0% | |
| GTTAAATAGTGGTGCAATAG+CGG | - | Chr4:4740644-4740663 | MsG0480018425.01.T01:CDS | 35.0% | |
| TCAAACATACAACAAGGCTA+AGG | + | Chr4:4742916-4742935 | None:intergenic | 35.0% | |
| TTCACCCAAACCAAATCAAA+AGG | + | Chr4:4740002-4740021 | None:intergenic | 35.0% | |
| TTTGCTTTCGTTAGTAGACA+GGG | - | Chr4:4740139-4740158 | MsG0480018425.01.T01:intron | 35.0% | |
| ! | GTTGAAAAGCATGAAAGGAA+TGG | - | Chr4:4743008-4743027 | MsG0480018425.01.T01:five_prime_UTR | 35.0% |
| ! | TAAAGGTCAGTTGAAGCTTT+TGG | - | Chr4:4741996-4742015 | MsG0480018425.01.T01:intron | 35.0% |
| ! | TGGTCATTTAAGATTAGCGA+TGG | + | Chr4:4742698-4742717 | None:intergenic | 35.0% |
| ! | TTTTCCTTCTCACTCTCTAT+CGG | + | Chr4:4740802-4740821 | None:intergenic | 35.0% |
| !! | ATCATGCTTTGAAGGGAAAA+GGG | + | Chr4:4739362-4739381 | None:intergenic | 35.0% |
| !! | GAAGAGGTTTCCTTTTGATT+TGG | - | Chr4:4739989-4740008 | MsG0480018425.01.T01:intron | 35.0% |
| !! | TATCATGCTTTGAAGGGAAA+AGG | + | Chr4:4739363-4739382 | None:intergenic | 35.0% |
| !!! | ACCAATTTTTTTCCCAGGTA+AGG | - | Chr4:4742714-4742733 | MsG0480018425.01.T01:five_prime_UTR | 35.0% |
| !!! | CCAATTTTTTTCCCAGGTAA+GGG | - | Chr4:4742715-4742734 | MsG0480018425.01.T01:five_prime_UTR | 35.0% |
| !!! | GGTTTCCTTTTGATTTGGTT+TGG | - | Chr4:4739994-4740013 | MsG0480018425.01.T01:intron | 35.0% |
| AAAATCCCTTTGCAAGGACA+AGG | + | Chr4:4739882-4739901 | None:intergenic | 40.0% | |
| AAGAGGGGGAGTTATGATTA+TGG | - | Chr4:4740230-4740249 | MsG0480018425.01.T01:intron | 40.0% | |
| ACATACAACAAGGCTAAGGA+AGG | + | Chr4:4742912-4742931 | None:intergenic | 40.0% | |
| ACGAACGTGTTCGTTTATAG+AGG | - | Chr4:4742146-4742165 | MsG0480018425.01.T01:CDS | 40.0% | |
| AGAGCATAAATCCTGCTTCA+GGG | - | Chr4:4740360-4740379 | MsG0480018425.01.T01:CDS | 40.0% | |
| ATGACCATGCTTTCAGAGAA+AGG | - | Chr4:4741964-4741983 | MsG0480018425.01.T01:intron | 40.0% | |
| ATGCTTGGCTATGAAGACAA+AGG | + | Chr4:4742830-4742849 | None:intergenic | 40.0% | |
| ATGGACCGTCATCAATAACA+TGG | + | Chr4:4741771-4741790 | None:intergenic | 40.0% | |
| ATGGCATTTACAAGTTGCCA+AGG | + | Chr4:4742853-4742872 | None:intergenic | 40.0% | |
| CCCTTACCTGGGAAAAAAAT+TGG | + | Chr4:4742718-4742737 | None:intergenic | 40.0% | |
| CTCGAATATATTCCTTGTCC+TGG | + | Chr4:4741151-4741170 | None:intergenic | 40.0% | |
| GAAGGAGTGATGAATTCTAG+AGG | + | Chr4:4742894-4742913 | None:intergenic | 40.0% | |
| GCAAACATTCATGCGATGAT+CGG | - | Chr4:4742196-4742215 | MsG0480018425.01.T01:CDS | 40.0% | |
| GTTTGCTTTCGTTAGTAGAC+AGG | - | Chr4:4740138-4740157 | MsG0480018425.01.T01:intron | 40.0% | |
| TACCCTAAAATCCCTTTGCA+AGG | + | Chr4:4739888-4739907 | None:intergenic | 40.0% | |
| TCTACTAACGAAAGCAAACG+CGG | + | Chr4:4740137-4740156 | None:intergenic | 40.0% | |
| TGGAAATGAGACAATACGAG+AGG | - | Chr4:4741371-4741390 | MsG0480018425.01.T01:intron | 40.0% | |
| TTGGCAACTTGTAAATGCCA+TGG | - | Chr4:4742852-4742871 | MsG0480018425.01.T01:five_prime_UTR | 40.0% | |
| TTGTGACCCCTTCAAAATCT+AGG | + | Chr4:4740596-4740615 | None:intergenic | 40.0% | |
| ! | CGTTTATAGAGGCATGTATG+TGG | - | Chr4:4742157-4742176 | MsG0480018425.01.T01:CDS | 40.0% |
| ! | GTCCTTGCAAAGGGATTTTA+GGG | - | Chr4:4739883-4739902 | MsG0480018425.01.T01:intron | 40.0% |
| ! | TCTTTATCTAGAGCTGGAGA+AGG | - | Chr4:4741267-4741286 | MsG0480018425.01.T01:CDS | 40.0% |
| ! | TGAATTCTAGAGGCTACAAG+AGG | + | Chr4:4742884-4742903 | None:intergenic | 40.0% |
| ! | TGTCCTTGCAAAGGGATTTT+AGG | - | Chr4:4739882-4739901 | MsG0480018425.01.T01:intron | 40.0% |
| ! | TTCTCCTTTCTCTGAAAGCA+TGG | + | Chr4:4741971-4741990 | None:intergenic | 40.0% |
| ! | TTGAGTTTGAAACGTAGGTC+AGG | - | Chr4:4740194-4740213 | MsG0480018425.01.T01:intron | 40.0% |
| ! | TTTTGCCTTGTCCTTGCAAA+GGG | - | Chr4:4739874-4739893 | MsG0480018425.01.T01:intron | 40.0% |
| !! | GATTTGGTTTGGGTGAAGAA+AGG | - | Chr4:4740005-4740024 | MsG0480018425.01.T01:intron | 40.0% |
| !!! | GCAAAGGGATTTTAGGGTAT+AGG | - | Chr4:4739889-4739908 | MsG0480018425.01.T01:intron | 40.0% |
| !!! | GGGTTTTGAGTTTGAAACGT+AGG | - | Chr4:4740189-4740208 | MsG0480018425.01.T01:intron | 40.0% |
| AACACCGATAGAGAGTGAGA+AGG | - | Chr4:4740795-4740814 | MsG0480018425.01.T01:CDS | 45.0% | |
| ACAGAGGATACGATGCAAAG+GGG | - | Chr4:4740162-4740181 | MsG0480018425.01.T01:intron | 45.0% | |
| AGCTATACCTTAGTCCATGG+AGG | + | Chr4:4742090-4742109 | None:intergenic | 45.0% | |
| ATACGATGCAAAGGGGAAGA+GGG | - | Chr4:4740169-4740188 | MsG0480018425.01.T01:intron | 45.0% | |
| ATTCAAAGTCAGCAGAGGTG+CGG | - | Chr4:4741539-4741558 | MsG0480018425.01.T01:intron | 45.0% | |
| CAGAGCATAAATCCTGCTTC+AGG | - | Chr4:4740359-4740378 | MsG0480018425.01.T01:CDS | 45.0% | |
| CGTCCAAATCATGACAAGTC+CGG | + | Chr4:4741081-4741100 | None:intergenic | 45.0% | |
| CTAACTTCTTTCCCTGAAGC+AGG | + | Chr4:4740374-4740393 | None:intergenic | 45.0% | |
| CTATACCTTAGTCCATGGAG+GGG | + | Chr4:4742088-4742107 | None:intergenic | 45.0% | |
| GAAAGCTCTACTGTCAAGAC+AGG | + | Chr4:4742342-4742361 | None:intergenic | 45.0% | |
| GAAGATGAGAGTTCGTGTTC+AGG | - | Chr4:4740110-4740129 | MsG0480018425.01.T01:intron | 45.0% | |
| GACAGAGGATACGATGCAAA+GGG | - | Chr4:4740161-4740180 | MsG0480018425.01.T01:intron | 45.0% | |
| GACTGAATGCAACATCAGAC+TGG | + | Chr4:4740289-4740308 | None:intergenic | 45.0% | |
| GCTATACCTTAGTCCATGGA+GGG | + | Chr4:4742089-4742108 | None:intergenic | 45.0% | |
| GGAAGCTATACCTTAGTCCA+TGG | + | Chr4:4742093-4742112 | None:intergenic | 45.0% | |
| GGCTTAGTGAATGGAAACGA+AGG | - | Chr4:4741560-4741579 | MsG0480018425.01.T01:intron | 45.0% | |
| GTTGCATTCAAAGTCAGCAG+AGG | - | Chr4:4741534-4741553 | MsG0480018425.01.T01:intron | 45.0% | |
| TACAAGTTGCCAAGGATGCT+TGG | + | Chr4:4742845-4742864 | None:intergenic | 45.0% | |
| TATACCTTAGTCCATGGAGG+GGG | + | Chr4:4742087-4742106 | None:intergenic | 45.0% | |
| TATGATATCGCGTCTGCAAG+AGG | - | Chr4:4741330-4741349 | MsG0480018425.01.T01:CDS | 45.0% | |
| TATTCGGTCTTGCTTGCACA+TGG | + | Chr4:4741790-4741809 | None:intergenic | 45.0% | |
| TCACCGGACTTGTCATGATT+TGG | - | Chr4:4741075-4741094 | MsG0480018425.01.T01:CDS | 45.0% | |
| TCTTCATAGCCAAGCATCCT+TGG | - | Chr4:4742833-4742852 | MsG0480018425.01.T01:five_prime_UTR | 45.0% | |
| TCTTGGAGAAAGGCTGAAGA+TGG | - | Chr4:4741921-4741940 | MsG0480018425.01.T01:intron | 45.0% | |
| TGAAACGTAGGTCAGGAACT+CGG | - | Chr4:4740201-4740220 | MsG0480018425.01.T01:intron | 45.0% | |
| TTGTCTCCCAAGACACACTT+TGG | + | Chr4:4742757-4742776 | None:intergenic | 45.0% | |
| ! | AAAGTGCTTTCTGTCTGCGA+TGG | + | Chr4:4741616-4741635 | None:intergenic | 45.0% |
| ! | ATACTGCTGCTTCCATCACA+AGG | + | Chr4:4740320-4740339 | None:intergenic | 45.0% |
| ! | CTTTTGCCTTGTCCTTGCAA+AGG | - | Chr4:4739873-4739892 | MsG0480018425.01.T01:intron | 45.0% |
| ! | TCTTTTCCTCTCCCTTACCT+GGG | + | Chr4:4742729-4742748 | None:intergenic | 45.0% |
| ! | TGCTGCTCTTTATCTAGAGC+TGG | - | Chr4:4741261-4741280 | MsG0480018425.01.T01:CDS | 45.0% |
| !! | GCTACAAGAGGTATTTGCCA+TGG | + | Chr4:4742872-4742891 | None:intergenic | 45.0% |
| !! | GGAGAAAGCGTCAATGGAAA+TGG | - | Chr4:4741351-4741370 | MsG0480018425.01.T01:CDS | 45.0% |
| !!! | TTTTTTCCCAGGTAAGGGAG+AGG | - | Chr4:4742720-4742739 | MsG0480018425.01.T01:five_prime_UTR | 45.0% |
| ACGGTTGAAAGTCCAGGACA+AGG | - | Chr4:4741136-4741155 | MsG0480018425.01.T01:CDS | 50.0% | |
| AGGCTGCCAAAGTGTGTCTT+GGG | - | Chr4:4742748-4742767 | MsG0480018425.01.T01:five_prime_UTR | 50.0% | |
| AGTCCTTGCTTGCCTTGTGA+TGG | - | Chr4:4740305-4740324 | MsG0480018425.01.T01:intron | 50.0% | |
| CAATTAAGGAATCCCGCACG+TGG | - | Chr4:4742051-4742070 | MsG0480018425.01.T01:CDS | 50.0% | |
| CAGACGCGATATCATAGCCA+TGG | + | Chr4:4741326-4741345 | None:intergenic | 50.0% | |
| CAGGTAAGGGAGAGGAAAAG+AGG | - | Chr4:4742728-4742747 | MsG0480018425.01.T01:five_prime_UTR | 50.0% | |
| CTTCCATCACAAGGCAAGCA+AGG | + | Chr4:4740311-4740330 | None:intergenic | 50.0% | |
| CTTCGCCGCCATTACTTGAA+TGG | + | Chr4:4739973-4739992 | None:intergenic | 50.0% | |
| GATACGATGCAAAGGGGAAG+AGG | - | Chr4:4740168-4740187 | MsG0480018425.01.T01:intron | 50.0% | |
| GCATCAACGGTTGAAAGTCC+AGG | - | Chr4:4741130-4741149 | MsG0480018425.01.T01:CDS | 50.0% | |
| GGACAGAGGATACGATGCAA+AGG | - | Chr4:4740160-4740179 | MsG0480018425.01.T01:intron | 50.0% | |
| TCGTTAGTAGACAGGGACAG+AGG | - | Chr4:4740146-4740165 | MsG0480018425.01.T01:intron | 50.0% | |
| TTCAAGTAATGGCGGCGAAG+AGG | - | Chr4:4739973-4739992 | MsG0480018425.01.T01:intron | 50.0% | |
| ! | CTCTTTTCCTCTCCCTTACC+TGG | + | Chr4:4742730-4742749 | None:intergenic | 50.0% |
| !! | GCAAGAGGAGAAAGCGTCAA+TGG | - | Chr4:4741345-4741364 | MsG0480018425.01.T01:CDS | 50.0% |
| AACGTAGGTCAGGAACTCGG+CGG | - | Chr4:4740204-4740223 | MsG0480018425.01.T01:intron | 55.0% | |
| CATAGCCATGGCTTCGTCAG+CGG | + | Chr4:4741314-4741333 | None:intergenic | 55.0% | |
| GAGGCTGCCAAAGTGTGTCT+TGG | - | Chr4:4742747-4742766 | MsG0480018425.01.T01:five_prime_UTR | 55.0% | |
| ! | CAGAGGTGCGGCTTAGTGAA+TGG | - | Chr4:4741551-4741570 | MsG0480018425.01.T01:intron | 55.0% |
| AGGAACTCGGCGGAGGAAGA+GGG | - | Chr4:4740214-4740233 | MsG0480018425.01.T01:intron | 60.0% | |
| TACTGCCGCTGACGAAGCCA+TGG | - | Chr4:4741306-4741325 | MsG0480018425.01.T01:CDS | 60.0% | |
| ! | GTTGCCCCCTCCATGGACTA+AGG | - | Chr4:4742080-4742099 | MsG0480018425.01.T01:CDS | 60.0% |
| CAGGAACTCGGCGGAGGAAG+AGG | - | Chr4:4740213-4740232 | MsG0480018425.01.T01:intron | 65.0% | |
| GAACTCGGCGGAGGAAGAGG+GGG | - | Chr4:4740216-4740235 | MsG0480018425.01.T01:intron | 65.0% | |
| GGAACTCGGCGGAGGAAGAG+GGG | - | Chr4:4740215-4740234 | MsG0480018425.01.T01:intron | 65.0% | |
| GTAGGTCAGGAACTCGGCGG+AGG | - | Chr4:4740207-4740226 | MsG0480018425.01.T01:intron | 65.0% | |
| GCGCATCGTTGCCCCCTCCA+TGG | - | Chr4:4742073-4742092 | MsG0480018425.01.T01:CDS | 70.0% | |
| GGCAACGATGCGCCACGTGC+GGG | + | Chr4:4742066-4742085 | None:intergenic | 70.0% | |
| GGGCAACGATGCGCCACGTG+CGG | + | Chr4:4742067-4742086 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 4739246 | 4743197 | 4739246 | ID=MsG0480018425.01;Name=MsG0480018425.01 |
| Chr4 | mRNA | 4739246 | 4743197 | 4739246 | ID=MsG0480018425.01.T01;Parent=MsG0480018425.01;Name=MsG0480018425.01.T01;_AED=0.26;_eAED=0.26;_QI=489|1|1|1|0.5|0.66|3|407|587 |
| Chr4 | exon | 4739246 | 4739712 | 4739246 | ID=MsG0480018425.01.T01:exon:1267;Parent=MsG0480018425.01.T01 |
| Chr4 | exon | 4740342 | 4741378 | 4740342 | ID=MsG0480018425.01.T01:exon:1266;Parent=MsG0480018425.01.T01 |
| Chr4 | exon | 4742042 | 4743197 | 4742042 | ID=MsG0480018425.01.T01:exon:1265;Parent=MsG0480018425.01.T01 |
| Chr4 | five_prime_UTR | 4742709 | 4743197 | 4742709 | ID=MsG0480018425.01.T01:five_prime_utr;Parent=MsG0480018425.01.T01 |
| Chr4 | CDS | 4742042 | 4742708 | 4742042 | ID=MsG0480018425.01.T01:cds;Parent=MsG0480018425.01.T01 |
| Chr4 | CDS | 4740342 | 4741378 | 4740342 | ID=MsG0480018425.01.T01:cds;Parent=MsG0480018425.01.T01 |
| Chr4 | CDS | 4739653 | 4739712 | 4739653 | ID=MsG0480018425.01.T01:cds;Parent=MsG0480018425.01.T01 |
| Chr4 | three_prime_UTR | 4739246 | 4739652 | 4739246 | ID=MsG0480018425.01.T01:three_prime_utr;Parent=MsG0480018425.01.T01 |
| Gene Sequence |
| Protein sequence |
