AlfalfaGEDB | MsG0680030561.01

M. sativa cultivar ZhongmuNo.1 / MsG0680030561.01

KEGG: -
GO: -
PFAM: PF00254

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680030561.01.T01	AES72516.1	88.281	128	15	0	66	193	203	330	1.16E-67	229

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680030561.01.T01	Q38931	58.824	85	33	2	9	93	293	375	8.16E-20	89.7

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680030561.01.T01	G7J7F4	88.281	128	15	0	66	193	203	330	3.54e-67	229

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047869.01	MsG0680030561.01	0.809308	2.018100e-50	1.180766e-47
MsG0080048231.01	MsG0680030561.01	0.812986	3.216280e-51	2.074714e-48
MsG0080048874.01	MsG0680030561.01	0.814257	1.689314e-51	1.127976e-48
MsG0180000065.01	MsG0680030561.01	0.802181	6.337369e-49	3.084016e-46
MsG0180000091.01	MsG0680030561.01	0.801420	9.081605e-49	4.335025e-46
MsG0180000470.01	MsG0680030561.01	0.822060	2.899447e-53	2.400589e-50
MsG0180000475.01	MsG0680030561.01	0.816196	6.263341e-52	4.408981e-49
MsG0180000555.01	MsG0680030561.01	0.800767	1.235214e-48	5.799422e-46
MsG0180000585.01	MsG0680030561.01	0.807007	6.236752e-50	3.435080e-47
MsG0180000680.01	MsG0680030561.01	0.817113	3.902068e-52	2.816472e-49
MsG0180000702.01	MsG0680030561.01	0.807524	4.847706e-50	2.706144e-47
MsG0180000703.01	MsG0680030561.01	0.807825	4.182606e-50	2.353219e-47
MsG0180000741.01	MsG0680030561.01	0.813769	2.164156e-51	1.425997e-48
MsG0180000855.01	MsG0680030561.01	0.808200	3.481151e-50	1.978129e-47
MsG0180001312.01	MsG0680030561.01	0.813255	2.807308e-51	1.824116e-48
MsG0180001663.01	MsG0680030561.01	0.813460	2.531405e-51	1.654230e-48
MsG0180001971.01	MsG0680030561.01	0.845116	4.962982e-59	8.185239e-56
MsG0180002071.01	MsG0680030561.01	0.834545	2.816781e-56	3.353693e-53
MsG0180002952.01	MsG0680030561.01	0.836328	9.983331e-57	1.254119e-53
MsG0180002955.01	MsG0680030561.01	0.806150	9.457148e-50	5.095659e-47
MsG0180003673.01	MsG0680030561.01	0.839105	1.933709e-57	2.643133e-54
MsG0180003686.01	MsG0680030561.01	0.827999	1.147250e-54	1.125858e-51
MsG0180003810.01	MsG0680030561.01	0.807845	4.143023e-50	2.332101e-47
MsG0180003940.01	MsG0680030561.01	0.823020	1.734100e-53	1.475690e-50
MsG0180004264.01	MsG0680030561.01	0.817791	2.745353e-52	2.018806e-49
MsG0180004331.01	MsG0680030561.01	0.823690	1.209241e-53	1.048802e-50
MsG0180004372.01	MsG0680030561.01	0.817381	3.395843e-52	2.469323e-49
MsG0180004465.01	MsG0680030561.01	0.813491	2.491960e-51	1.629795e-48
MsG0180004691.01	MsG0680030561.01	0.804718	1.888679e-49	9.809108e-47
MsG0180004765.01	MsG0680030561.01	0.806115	9.623398e-50	5.180479e-47
MsG0180004797.01	MsG0680030561.01	0.802845	4.624722e-49	2.289137e-46
MsG0180004943.01	MsG0680030561.01	0.818013	2.445788e-52	1.809423e-49
MsG0180005050.01	MsG0680030561.01	0.818191	2.229301e-52	1.657386e-49
MsG0180005160.01	MsG0680030561.01	0.808755	2.649653e-50	1.527591e-47
MsG0180005185.01	MsG0680030561.01	0.843886	1.063647e-58	1.687912e-55
MsG0180005705.01	MsG0680030561.01	0.809896	1.508366e-50	8.963830e-48
MsG0180005732.01	MsG0680030561.01	0.819424	1.170176e-52	9.001313e-50
MsG0180005842.01	MsG0680030561.01	0.800204	1.608640e-48	7.445655e-46
MsG0180005960.01	MsG0680030561.01	0.800074	1.709387e-48	7.886122e-46
MsG0180006134.01	MsG0680030561.01	0.823146	1.620256e-53	1.383740e-50
MsG0180006207.01	MsG0680030561.01	0.801539	8.586661e-49	4.111098e-46
MsG0280010599.01	MsG0680030561.01	0.810058	1.391703e-50	8.306119e-48
MsG0280010722.01	MsG0680030561.01	0.813194	2.896262e-51	1.878775e-48
MsG0280010816.01	MsG0680030561.01	0.801811	7.551156e-49	3.640362e-46
MsG0280011032.01	MsG0680030561.01	0.842585	2.364045e-58	3.600932e-55
MsG0280011131.01	MsG0680030561.01	0.815900	7.292901e-52	5.091950e-49
MsG0280011334.01	MsG0680030561.01	0.801548	8.547442e-49	4.093230e-46
MsG0380011617.01	MsG0680030561.01	0.822121	2.806471e-53	2.327774e-50
MsG0380011786.01	MsG0680030561.01	0.802864	4.581342e-49	2.268697e-46
MsG0380012085.01	MsG0680030561.01	0.818826	1.600529e-52	1.210961e-49
MsG0380012330.01	MsG0680030561.01	0.836651	8.260822e-57	1.047567e-53
MsG0380012361.01	MsG0680030561.01	0.812728	3.663498e-51	2.347203e-48
MsG0380012362.01	MsG0680030561.01	0.826576	2.515439e-54	2.368189e-51
MsG0380012365.01	MsG0680030561.01	0.833005	6.836107e-56	7.771684e-53
MsG0380013176.01	MsG0680030561.01	0.808133	3.597795e-50	2.040661e-47
MsG0380013363.01	MsG0680030561.01	0.814050	1.876380e-51	1.245856e-48
MsG0380014135.01	MsG0680030561.01	0.815651	8.286264e-52	5.746839e-49
MsG0380014251.01	MsG0680030561.01	0.815839	7.524643e-52	5.244984e-49
MsG0380014573.01	MsG0680030561.01	0.834547	2.814729e-56	3.351350e-53
MsG0380014866.01	MsG0680030561.01	0.808599	2.861261e-50	1.642872e-47
MsG0480018465.01	MsG0680030561.01	0.800561	1.360243e-48	6.353404e-46
MsG0480018640.01	MsG0680030561.01	0.802234	6.180502e-49	3.011803e-46
MsG0480018659.01	MsG0680030561.01	0.801795	7.605300e-49	3.665004e-46
MsG0480018778.01	MsG0680030561.01	0.836448	9.300730e-57	1.172497e-53
MsG0480018964.01	MsG0680030561.01	0.813073	3.078827e-51	1.990603e-48
MsG0480019335.01	MsG0680030561.01	0.816292	5.962184e-52	4.208181e-49
MsG0480019435.01	MsG0680030561.01	0.840713	7.366770e-58	1.058317e-54
MsG0480019772.01	MsG0680030561.01	0.819681	1.022109e-52	7.918909e-50
MsG0480019970.01	MsG0680030561.01	0.813966	1.958797e-51	1.297614e-48
MsG0480020499.01	MsG0680030561.01	0.802808	4.705705e-49	2.327082e-46
MsG0480020964.01	MsG0680030561.01	0.821118	4.784904e-53	3.858410e-50
MsG0480020992.01	MsG0680030561.01	0.826038	3.378188e-54	3.132255e-51
MsG0480021276.01	MsG0680030561.01	0.807283	5.452614e-50	3.024852e-47
MsG0480021426.01	MsG0680030561.01	0.805245	1.464991e-49	7.712122e-47
MsG0480021534.01	MsG0680030561.01	0.807107	5.941565e-50	3.280821e-47
MsG0480021784.01	MsG0680030561.01	0.825646	4.184696e-54	3.836975e-51
MsG0480022067.01	MsG0680030561.01	0.812949	3.276432e-51	2.111394e-48
MsG0480022145.01	MsG0680030561.01	0.802899	4.507115e-49	2.233932e-46
MsG0480022169.01	MsG0680030561.01	0.837940	3.863837e-57	5.097294e-54
MsG0480022259.01	MsG0680030561.01	0.853945	1.708244e-61	3.753892e-58
MsG0480022261.01	MsG0680030561.01	0.812292	4.562778e-51	2.889834e-48
MsG0480022262.01	MsG0680030561.01	0.864514	1.150952e-64	3.623171e-61
MsG0480022575.01	MsG0680030561.01	0.803044	4.206394e-49	2.092471e-46
MsG0480023251.01	MsG0680030561.01	0.801605	8.320281e-49	3.990115e-46
MsG0480023354.01	MsG0680030561.01	0.811437	7.005481e-51	4.336446e-48
MsG0480023427.01	MsG0680030561.01	0.814829	1.262127e-51	8.558468e-49
MsG0480023638.01	MsG0680030561.01	0.816869	4.427646e-52	3.174687e-49
MsG0480023654.01	MsG0680030561.01	0.821773	3.379141e-53	2.775224e-50
MsG0480023670.01	MsG0680030561.01	0.817981	2.487296e-52	1.838452e-49
MsG0480023835.01	MsG0680030561.01	0.803217	3.872639e-49	1.935088e-46
MsG0480024014.01	MsG0680030561.01	0.800875	1.173895e-48	5.527081e-46
MsG0580024038.01	MsG0680030561.01	0.807953	3.928986e-50	2.217957e-47
MsG0580024114.01	MsG0680030561.01	0.820062	8.366404e-53	6.551833e-50
MsG0580024304.01	MsG0680030561.01	0.818516	1.882218e-52	1.411964e-49
MsG0580024305.01	MsG0680030561.01	0.801150	1.031442e-48	4.890292e-46
MsG0580024363.01	MsG0680030561.01	-0.806709	7.212036e-50	3.941648e-47
MsG0580024433.01	MsG0680030561.01	0.809032	2.311592e-50	1.342550e-47
MsG0580024621.01	MsG0680030561.01	0.800365	1.491254e-48	6.931032e-46
MsG0580024690.01	MsG0680030561.01	0.809077	2.261830e-50	1.315244e-47
MsG0580024781.01	MsG0680030561.01	0.802554	5.310355e-49	2.608893e-46
MsG0580024853.01	MsG0680030561.01	0.802057	6.718852e-49	3.259495e-46
MsG0580025008.01	MsG0680030561.01	0.809241	2.085063e-50	1.217864e-47
MsG0580025009.01	MsG0680030561.01	0.811795	5.856544e-51	3.659539e-48
MsG0580025022.01	MsG0680030561.01	0.813533	2.439488e-51	1.597262e-48
MsG0580025381.01	MsG0680030561.01	0.816013	6.883207e-52	4.821059e-49
MsG0580025448.01	MsG0680030561.01	0.804020	2.638965e-49	1.346174e-46
MsG0580025638.01	MsG0680030561.01	0.811092	8.323085e-51	5.105278e-48
MsG0580025666.01	MsG0680030561.01	0.801799	7.594365e-49	3.660013e-46
MsG0580025723.01	MsG0680030561.01	0.802795	4.734747e-49	2.340611e-46
MsG0580025758.01	MsG0680030561.01	0.845692	3.466547e-59	5.824998e-56
MsG0580025807.01	MsG0680030561.01	0.813987	1.938120e-51	1.284575e-48
MsG0580025900.01	MsG0680030561.01	0.810976	8.818933e-51	5.393445e-48
MsG0580025907.01	MsG0680030561.01	0.815200	1.044247e-51	7.152336e-49
MsG0380014981.01	MsG0680030561.01	0.840029	1.111919e-57	1.564125e-54
MsG0380015039.01	MsG0680030561.01	0.804974	1.669884e-49	8.730084e-47
MsG0380015931.01	MsG0680030561.01	0.801298	9.618411e-49	4.577282e-46
MsG0380016064.01	MsG0680030561.01	0.813752	2.183046e-51	1.437783e-48
MsG0380016209.01	MsG0680030561.01	0.809631	1.720259e-50	1.015301e-47
MsG0380016475.01	MsG0680030561.01	0.819779	9.707156e-53	7.541666e-50
MsG0380016517.01	MsG0680030561.01	0.823147	1.619578e-53	1.383186e-50
MsG0380016624.01	MsG0680030561.01	0.800404	1.464689e-48	6.814129e-46
MsG0380016694.01	MsG0680030561.01	0.804698	1.906898e-49	9.898273e-47
MsG0380016859.01	MsG0680030561.01	0.811928	5.477734e-51	3.434879e-48
MsG0380016910.01	MsG0680030561.01	0.805823	1.108105e-49	5.920938e-47
MsG0380017048.01	MsG0680030561.01	0.824179	9.287747e-54	8.166074e-51
MsG0380017220.01	MsG0680030561.01	0.822810	1.941262e-53	1.642125e-50
MsG0380017326.01	MsG0680030561.01	0.802746	4.846290e-49	2.392714e-46
MsG0380017528.01	MsG0680030561.01	0.823005	1.748228e-53	1.487067e-50
MsG0480018121.01	MsG0680030561.01	0.805184	1.508635e-49	7.929632e-47
MsG0480018251.01	MsG0680030561.01	0.815195	1.046942e-51	7.169781e-49
MsG0480018318.01	MsG0680030561.01	0.827607	1.425004e-54	1.382357e-51
MsG0480018347.01	MsG0680030561.01	0.835880	1.296917e-56	1.607096e-53
MsG0580027719.01	MsG0680030561.01	0.829355	5.391023e-55	5.504936e-52
MsG0580027745.01	MsG0680030561.01	0.829165	5.994607e-55	6.086687e-52
MsG0580027833.01	MsG0680030561.01	0.805217	1.485083e-49	7.812316e-47
MsG0580027922.01	MsG0680030561.01	0.806264	8.950979e-50	4.837017e-47
MsG0580027926.01	MsG0680030561.01	0.819201	1.314891e-52	1.005190e-49
MsG0580027937.01	MsG0680030561.01	0.822787	1.964938e-53	1.661092e-50
MsG0580029554.01	MsG0680030561.01	0.801207	1.004080e-48	4.767192e-46
MsG0580029622.01	MsG0680030561.01	0.828784	7.417120e-55	7.446370e-52
MsG0580029651.01	MsG0680030561.01	0.800286	1.547591e-48	7.178442e-46
MsG0680030316.01	MsG0680030561.01	0.815893	7.321268e-52	5.110633e-49
MsG0680030321.01	MsG0680030561.01	0.801590	8.379870e-49	4.017206e-46
MsG0680030561.01	MsG0680030667.01	0.804559	2.038532e-49	1.054326e-46
MsG0680030561.01	MsG0680031355.01	0.817275	3.587866e-52	2.601117e-49
MsG0680030561.01	MsG0680032360.01	0.813230	2.843301e-51	1.846212e-48
MsG0680030561.01	MsG0680032801.01	0.802357	5.829869e-49	2.850022e-46
MsG0680030561.01	MsG0680033302.01	0.805354	1.389828e-49	7.337247e-47
MsG0680030561.01	MsG0680035005.01	0.825436	4.693607e-54	4.277574e-51
MsG0680030561.01	MsG0680035444.01	0.844107	9.277437e-59	1.482419e-55
MsG0680030561.01	MsG0680035455.01	0.828669	7.905495e-55	7.910574e-52
MsG0680030561.01	MsG0680035573.01	0.825658	4.158019e-54	3.813832e-51
MsG0680030561.01	MsG0680035692.01	0.806412	8.329793e-50	4.518142e-47
MsG0680030561.01	MsG0680035763.01	0.802866	4.577868e-49	2.267086e-46
MsG0680030561.01	MsG0780036018.01	0.811587	6.499384e-51	4.038856e-48
MsG0680030561.01	MsG0780036080.01	0.828773	7.460446e-55	7.487458e-52
MsG0680030561.01	MsG0780036128.01	0.810294	1.237931e-50	7.433607e-48
MsG0680030561.01	MsG0780036201.01	0.820551	6.460890e-53	5.128185e-50
MsG0680030561.01	MsG0780037146.01	0.810054	1.394927e-50	8.324232e-48
MsG0680030561.01	MsG0780037845.01	0.830296	3.181567e-55	3.338144e-52
MsG0680030561.01	MsG0780038092.01	0.840144	1.037941e-57	1.465165e-54
MsG0680030561.01	MsG0780038401.01	0.822967	1.784047e-53	1.515869e-50
MsG0680030561.01	MsG0780038602.01	0.819871	9.247914e-53	7.203197e-50
MsG0680030561.01	MsG0780038644.01	0.806054	9.911040e-50	5.327093e-47
MsG0680030561.01	MsG0780039171.01	0.810274	1.250383e-50	7.504537e-48
MsG0680030561.01	MsG0780039252.01	0.811388	7.179670e-51	4.438260e-48
MsG0680030561.01	MsG0780039777.01	0.802862	4.586063e-49	2.270926e-46
MsG0680030561.01	MsG0780039832.01	0.818637	1.766654e-52	1.329644e-49
MsG0680030561.01	MsG0780040074.01	0.819895	9.132138e-53	7.117920e-50
MsG0680030561.01	MsG0780040704.01	0.806506	7.959031e-50	4.327462e-47
MsG0680030561.01	MsG0780040788.01	0.818186	2.235536e-52	1.661798e-49
MsG0680030561.01	MsG0780041033.01	0.801473	8.856198e-49	4.233172e-46
MsG0680030561.01	MsG0780041387.01	0.807492	4.922887e-50	2.745885e-47
MsG0680030561.01	MsG0780041671.01	0.800249	1.574829e-48	7.297658e-46
MsG0680030561.01	MsG0880041836.01	0.840540	8.176439e-58	1.168358e-54
MsG0680030561.01	MsG0880042078.01	0.813608	2.348374e-51	1.540727e-48
MsG0680030561.01	MsG0880042161.01	0.853717	1.986898e-61	4.333083e-58
MsG0680030561.01	MsG0880042404.01	0.805908	1.063360e-49	5.694221e-47
MsG0680030561.01	MsG0880042698.01	0.801388	9.218552e-49	4.396873e-46
MsG0680030561.01	MsG0880042965.01	0.818151	2.277040e-52	1.690966e-49
MsG0680030561.01	MsG0880043172.01	0.803714	3.055992e-49	1.546584e-46
MsG0680030561.01	MsG0880043509.01	0.800326	1.519122e-48	7.053601e-46
MsG0680030561.01	MsG0880043812.01	0.829256	5.699134e-55	5.802526e-52
MsG0680030561.01	MsG0880044257.01	0.807503	4.895878e-50	2.731628e-47
MsG0680030561.01	MsG0880044573.01	0.834951	2.226765e-56	2.683634e-53
MsG0680030561.01	MsG0880044574.01	0.829802	4.197100e-55	4.342275e-52
MsG0680030561.01	MsG0880044950.01	0.813162	2.942590e-51	1.907119e-48
MsG0680030561.01	MsG0880045371.01	0.818739	1.674936e-52	1.264206e-49
MsG0680030561.01	MsG0880045372.01	0.818483	1.914241e-52	1.434710e-49
MsG0680030561.01	MsG0880045639.01	0.802098	6.591856e-49	3.201127e-46
MsG0680030561.01	MsG0880045936.01	0.811464	6.909070e-51	4.279802e-48
MsG0680030561.01	MsG0880046020.01	0.808112	3.634981e-50	2.060612e-47
MsG0680030561.01	MsG0880046264.01	0.814276	1.673316e-51	1.117868e-48
MsG0680030561.01	MsG0880047019.01	0.817750	2.803963e-52	2.059687e-49
MsG0280006510.01	MsG0680030561.01	0.808026	3.790803e-50	2.144107e-47
MsG0280006976.01	MsG0680030561.01	0.826103	3.259227e-54	3.027533e-51
MsG0280007066.01	MsG0680030561.01	0.815272	1.006586e-51	6.908368e-49
MsG0280007072.01	MsG0680030561.01	0.813912	2.013398e-51	1.331777e-48
MsG0280007529.01	MsG0680030561.01	0.816243	6.114084e-52	4.309398e-49
MsG0280007547.01	MsG0680030561.01	0.823873	1.095622e-53	9.550832e-51
MsG0280007826.01	MsG0680030561.01	0.825500	4.531950e-54	4.137984e-51
MsG0280007864.01	MsG0680030561.01	-0.800643	1.308953e-48	6.126632e-46
MsG0280008030.01	MsG0680030561.01	0.828924	6.857729e-55	6.913073e-52
MsG0280008032.01	MsG0680030561.01	0.801639	8.187734e-49	3.930002e-46
MsG0280008073.01	MsG0680030561.01	0.830638	2.623015e-55	2.779861e-52
MsG0280008100.01	MsG0680030561.01	0.806273	8.911097e-50	4.816644e-47
MsG0280008363.01	MsG0680030561.01	0.805234	1.473061e-49	7.752522e-47
MsG0280008615.01	MsG0680030561.01	0.810516	1.108807e-50	6.697498e-48
MsG0280008894.01	MsG0680030561.01	0.802709	4.933689e-49	2.433496e-46
MsG0280009024.01	MsG0680030561.01	0.818584	1.816147e-52	1.364905e-49
MsG0280009299.01	MsG0680030561.01	0.814604	1.415475e-51	9.540509e-49
MsG0280009646.01	MsG0680030561.01	0.833970	3.926635e-56	4.595327e-53
MsG0280009748.01	MsG0680030561.01	0.819381	1.196419e-52	9.191645e-50
MsG0280010443.01	MsG0680030561.01	0.838508	2.758989e-57	3.703191e-54

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680030561.01.T01	MTR_3g091650	88.281	128	15	0	66	193	203	330	1.40e-71	229
MsG0680030561.01.T01	MTR_3g091650	88.281	128	15	0	66	193	203	330	8.97e-71	229
MsG0680030561.01.T01	MTR_8g012340	60.000	105	37	3	9	113	294	393	1.18e-28	112
MsG0680030561.01.T01	MTR_8g011560	54.630	108	41	3	9	113	26	128	2.76e-25	98.6
MsG0680030561.01.T01	MTR_8g010620	54.717	106	42	3	9	113	96	196	3.46e-24	97.1
MsG0680030561.01.T01	MTR_8g011100	55.660	106	41	3	9	113	210	310	8.49e-24	97.4
MsG0680030561.01.T01	MTR_8g010620	54.717	106	42	3	9	113	163	263	9.04e-24	97.1
MsG0680030561.01.T01	MTR_8g010620	54.717	106	42	3	9	113	224	324	1.18e-23	97.4
MsG0680030561.01.T01	MTR_8g010620	54.717	106	42	3	9	113	199	299	1.20e-23	97.1
MsG0680030561.01.T01	MTR_7g053470	51.852	108	45	4	9	116	288	388	1.11e-21	92.0
MsG0680030561.01.T01	MTR_8g038785	67.606	71	13	2	2	68	418	482	3.23e-20	88.2
MsG0680030561.01.T01	MTR_8g008640	50.000	100	48	2	12	111	222	319	6.23e-19	84.3
MsG0680030561.01.T01	MTR_8g080980	48.148	108	49	3	9	116	292	392	1.37e-18	83.2
MsG0680030561.01.T01	MTR_8g011140	69.091	55	14	1	9	60	167	221	5.42e-17	77.0
MsG0680030561.01.T01	MTR_1g017870	55.000	60	25	1	7	66	78	135	3.27e-12	64.3
MsG0680030561.01.T01	MTR_1g017870	55.000	60	25	1	7	66	162	219	3.83e-12	64.3
MsG0680030561.01.T01	MTR_1g017870	55.000	60	25	1	7	66	78	135	4.02e-12	64.3
MsG0680030561.01.T01	MTR_1g017870	55.000	60	25	1	7	66	162	219	4.43e-12	64.3
MsG0680030561.01.T01	MTR_1g017870	55.000	60	25	1	7	66	264	321	4.75e-12	64.3
MsG0680030561.01.T01	MTR_1g017870	55.000	60	25	1	7	66	288	345	5.83e-12	63.9
MsG0680030561.01.T01	MTR_1g017870	55.000	60	25	1	7	66	288	345	6.51e-12	63.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680030561.01.T01	AT3G25230	58.824	85	33	2	9	93	293	375	8.32e-21	89.7
MsG0680030561.01.T01	AT3G25230	58.824	85	33	2	9	93	293	375	1.00e-20	89.4
MsG0680030561.01.T01	AT5G48570	48.624	109	49	4	9	116	302	404	7.43e-18	81.3
MsG0680030561.01.T01	AT5G53020	39.844	128	56	4	66	191	161	269	6.84e-16	75.5
MsG0680030561.01.T01	AT5G53020	39.844	128	56	4	66	191	161	269	6.84e-16	75.5
MsG0680030561.01.T01	AT5G53020	39.844	128	56	4	66	191	161	269	6.91e-16	75.5
MsG0680030561.01.T01	AT5G53020	39.844	128	56	4	66	191	161	269	6.91e-16	75.5
MsG0680030561.01.T01	AT5G53020	39.844	128	56	4	66	191	161	269	6.91e-16	75.5
MsG0680030561.01.T01	AT5G53020	39.844	128	56	4	66	191	161	269	6.91e-16	75.5
MsG0680030561.01.T01	AT5G53020	39.844	128	56	4	66	191	161	269	6.91e-16	75.5
MsG0680030561.01.T01	AT5G53020	39.844	128	56	4	66	191	161	269	6.91e-16	75.5
MsG0680030561.01.T01	AT5G53020	39.844	128	56	4	66	191	161	269	6.91e-16	75.5
MsG0680030561.01.T01	AT5G53020	39.844	128	56	4	66	191	152	260	7.58e-16	75.5

Find 26 sgRNAs with CRISPR-Local

Find 60 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGCAAAATTTCACAAGGATT+TGG	0.229217	6:-5294024	MsG0680030561.01.T01:CDS
ATCTTTGCAGTGAAAGTAAT+TGG	0.273802	6:-5294761	MsG0680030561.01.T01:intron
TTAAGTTATCAAAGGTTAGA+AGG	0.298370	6:-5293920	MsG0680030561.01.T01:CDS
CGGTCGCACTGTTATGCATT+TGG	0.321613	6:-5294129	MsG0680030561.01.T01:CDS
GCTAAGATAAGCAAAATTTC+AGG	0.349111	6:-5295048	MsG0680030561.01.T01:intron
CAAAGAGGAGTCTGATTTGA+TGG	0.372221	6:-5294069	MsG0680030561.01.T01:CDS
TGCTACCTCACCCTTCTTCA+TGG	0.373091	6:+5294504	None:intergenic
TGAGCAGAGCAAGTGATTGA+TGG	0.470924	6:-5294547	MsG0680030561.01.T01:intron
AGACATCTTGCGACAGAACT+CGG	0.491610	6:-5294149	MsG0680030561.01.T01:CDS
GATGGTTCAGAAATTCACTT+TGG	0.497055	6:-5294051	MsG0680030561.01.T01:CDS
GAAAGAGGTTAAGTTATCAA+AGG	0.511514	6:-5293928	MsG0680030561.01.T01:CDS
GGAGGAACTTATTTCTGTCA+TGG	0.518018	6:-5294096	MsG0680030561.01.T01:CDS
AGCTGTAATGACCATGAAGA+AGG	0.522299	6:-5294515	MsG0680030561.01.T01:CDS
AAAGCAAATGCTGTTGAAAG+AGG	0.523700	6:-5293943	MsG0680030561.01.T01:CDS
GAGCAGAGCAAGTGATTGAT+GGG	0.549453	6:-5294546	MsG0680030561.01.T01:intron
TATGCATTTGGATGCTACAA+AGG	0.577556	6:-5294117	MsG0680030561.01.T01:CDS
GTTTGAATTCACAAGAGATG+AGG	0.584171	6:-5294678	MsG0680030561.01.T01:CDS
TTTGAATTCACAAGAGATGA+GGG	0.588141	6:-5294677	MsG0680030561.01.T01:intron
TTCTGTCATGGAGAACAAAG+AGG	0.590110	6:-5294084	MsG0680030561.01.T01:CDS
AAATGGAGAGAAGCTTCAGA+AGG	0.605319	6:-5293873	MsG0680030561.01.T01:CDS
GCTGTAATGACCATGAAGAA+GGG	0.607177	6:-5294514	MsG0680030561.01.T01:CDS
AATGACCATGAAGAAGGGTG+AGG	0.610564	6:-5294509	MsG0680030561.01.T01:CDS
GCATTTGGATGCTACAAAGG+AGG	0.627843	6:-5294114	MsG0680030561.01.T01:CDS
GGAGATTGCAAAATTTCACA+AGG	0.637872	6:-5294030	MsG0680030561.01.T01:CDS
GCGAACATAAGCGAAATGCA+AGG	0.645192	6:-5295072	None:intergenic
GCTCTGTTTCATCATCGCCA+CGG	0.673900	6:+5294702	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATCATTGAAAACTAAATG+AGG	+	Chr6:5294444-5294463	None:intergenic	20.0%
!!	TATATTAAAATCATGTCCTA+TGG	-	Chr6:5294642-5294661	MsG0680030561.01.T01:intron	20.0%
!!	TGGTACAAAAACAAATTTAT+GGG	+	Chr6:5294262-5294281	None:intergenic	20.0%
!!	TTGGTACAAAAACAAATTTA+TGG	+	Chr6:5294263-5294282	None:intergenic	20.0%
!!!	GTTTTTTTACTATGATACTT+TGG	-	Chr6:5294563-5294582	MsG0680030561.01.T01:intron	20.0%
!	CGTTAGTAATTTCAATCTTT+AGG	+	Chr6:5294544-5294563	None:intergenic	25.0%
!	TATCAAAATATTGTCAAGGA+AGG	-	Chr6:5293965-5293984	MsG0680030561.01.T01:CDS	25.0%
!	TGTAAAGCTTTCAAAATACA+AGG	-	Chr6:5293866-5293885	MsG0680030561.01.T01:CDS	25.0%
!	TTAAGTTATCAAAGGTTAGA+AGG	-	Chr6:5294958-5294977	MsG0680030561.01.T01:intron	25.0%
	AATAACATTCTTCTGATCTC+AGG	-	Chr6:5294667-5294686	MsG0680030561.01.T01:intron	30.0%
	ACAAAGCAACAAAATCAAAG+AGG	+	Chr6:5293892-5293911	None:intergenic	30.0%
	AGAAGAATGTTATTGACCAT+AGG	+	Chr6:5294661-5294680	None:intergenic	30.0%
	ATCATCATTGATGCTAATGA+AGG	-	Chr6:5294033-5294052	MsG0680030561.01.T01:CDS	30.0%
	ATCTTTGCAGTGAAAGTAAT+TGG	-	Chr6:5294117-5294136	MsG0680030561.01.T01:CDS	30.0%
	CTTCTTGTCATCAATTACTT+CGG	+	Chr6:5293943-5293962	None:intergenic	30.0%
	GAAAGAGGTTAAGTTATCAA+AGG	-	Chr6:5294950-5294969	MsG0680030561.01.T01:intron	30.0%
	GCTAAGATAAGCAAAATTTC+AGG	-	Chr6:5293830-5293849	MsG0680030561.01.T01:CDS	30.0%
	TACTTTGACAATTTGTGTGT+TGG	-	Chr6:5294617-5294636	MsG0680030561.01.T01:intron	30.0%
	TGCAAAATTTCACAAGGATT+TGG	-	Chr6:5294854-5294873	MsG0680030561.01.T01:intron	30.0%
	TTTGAATTCACAAGAGATGA+GGG	-	Chr6:5294201-5294220	MsG0680030561.01.T01:intron	30.0%
!	AGGGTATCAAAATATTGTCA+AGG	-	Chr6:5293961-5293980	MsG0680030561.01.T01:CDS	30.0%
!	CTTTGTTTCTTTGATGTGTT+GGG	-	Chr6:5293906-5293925	MsG0680030561.01.T01:CDS	30.0%
!	GAAGTAATTGATGACAAGAA+GGG	-	Chr6:5293942-5293961	MsG0680030561.01.T01:CDS	30.0%
!!	AGCACTGTATTTTTGAAGAA+GGG	-	Chr6:5294153-5294172	MsG0680030561.01.T01:CDS	30.0%
!!	TAGCACTGTATTTTTGAAGA+AGG	-	Chr6:5294152-5294171	MsG0680030561.01.T01:CDS	30.0%
!!	TTCATAATGGATTTAGTGCA+TGG	-	Chr6:5294066-5294085	MsG0680030561.01.T01:CDS	30.0%
	AAAGCAAATGCTGTTGAAAG+AGG	-	Chr6:5294935-5294954	MsG0680030561.01.T01:intron	35.0%
	AATATTGTCAAGGAAGGAGA+AGG	-	Chr6:5293971-5293990	MsG0680030561.01.T01:CDS	35.0%
	CTGAGCATGAAACAGAAAAA+TGG	-	Chr6:5294988-5295007	MsG0680030561.01.T01:intron	35.0%
	GATGGTTCAGAAATTCACTT+TGG	-	Chr6:5294827-5294846	MsG0680030561.01.T01:intron	35.0%
	GGAGATTGCAAAATTTCACA+AGG	-	Chr6:5294848-5294867	MsG0680030561.01.T01:intron	35.0%
	GTTTGAATTCACAAGAGATG+AGG	-	Chr6:5294200-5294219	MsG0680030561.01.T01:intron	35.0%
	TATGCATTTGGATGCTACAA+AGG	-	Chr6:5294761-5294780	MsG0680030561.01.T01:intron	35.0%
	TTTACAACAGCTCCATCATT+TGG	+	Chr6:5294007-5294026	None:intergenic	35.0%
!	AGGCTCTCTTCTTTTCATAA+TGG	-	Chr6:5294053-5294072	MsG0680030561.01.T01:CDS	35.0%
!	CGAAGTAATTGATGACAAGA+AGG	-	Chr6:5293941-5293960	MsG0680030561.01.T01:CDS	35.0%
!!	AAACATTGACTTTCGTCAGT+TGG	+	Chr6:5294282-5294301	None:intergenic	35.0%
!!	GCTTTGTTTCTTTGATGTGT+TGG	-	Chr6:5293905-5293924	MsG0680030561.01.T01:CDS	35.0%
	AAATGGAGAGAAGCTTCAGA+AGG	-	Chr6:5295005-5295024	MsG0680030561.01.T01:intron	40.0%
	AAGAGATGGTACTTCGAACT+TGG	+	Chr6:5294475-5294494	None:intergenic	40.0%
	AAGTACCATCTCTTCAACAC+TGG	-	Chr6:5294481-5294500	MsG0680030561.01.T01:intron	40.0%
	AGCTGTAATGACCATGAAGA+AGG	-	Chr6:5294363-5294382	MsG0680030561.01.T01:intron	40.0%
	CACTGCAAAGATGCAAAATG+AGG	+	Chr6:5294109-5294128	None:intergenic	40.0%
	GCTGTAATGACCATGAAGAA+GGG	-	Chr6:5294364-5294383	MsG0680030561.01.T01:intron	40.0%
	TTCTGTCATGGAGAACAAAG+AGG	-	Chr6:5294794-5294813	MsG0680030561.01.T01:intron	40.0%
!	CAAAGAGGAGTCTGATTTGA+TGG	-	Chr6:5294809-5294828	MsG0680030561.01.T01:intron	40.0%
!!	GGAGGAACTTATTTCTGTCA+TGG	-	Chr6:5294782-5294801	MsG0680030561.01.T01:intron	40.0%
	AATGACCATGAAGAAGGGTG+AGG	-	Chr6:5294369-5294388	MsG0680030561.01.T01:intron	45.0%
	AGACATCTTGCGACAGAACT+CGG	-	Chr6:5294729-5294748	MsG0680030561.01.T01:CDS	45.0%
	GAGCAGAGCAAGTGATTGAT+GGG	-	Chr6:5294332-5294351	MsG0680030561.01.T01:intron	45.0%
	GCATTTGGATGCTACAAAGG+AGG	-	Chr6:5294764-5294783	MsG0680030561.01.T01:intron	45.0%
	GGATATGAGCGTCCAAATGA+TGG	-	Chr6:5293992-5294011	MsG0680030561.01.T01:CDS	45.0%
	GTTGTATTGAGCAGAGCAAG+TGG	-	Chr6:5294302-5294321	MsG0680030561.01.T01:intron	45.0%
	TACCATCTCTTCAACACTGG+TGG	-	Chr6:5294484-5294503	MsG0680030561.01.T01:intron	45.0%
	TGAGCAGAGCAAGTGATTGA+TGG	-	Chr6:5294331-5294350	MsG0680030561.01.T01:intron	45.0%
!!	GTATTTTTGAAGAAGGGCCG+TGG	-	Chr6:5294159-5294178	MsG0680030561.01.T01:CDS	45.0%
	CGGTCGCACTGTTATGCATT+TGG	-	Chr6:5294749-5294768	MsG0680030561.01.T01:CDS	50.0%
	GCTCTGTTTCATCATCGCCA+CGG	+	Chr6:5294179-5294198	None:intergenic	50.0%
	TGCTACCTCACCCTTCTTCA+TGG	+	Chr6:5294377-5294396	None:intergenic	50.0%
!	GTCCACCAGTGTTGAAGAGA+TGG	+	Chr6:5294489-5294508	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
Chr6	gene	5293821	5295079	5293821	ID=MsG0680030561.01;Name=MsG0680030561.01
Chr6	mRNA	5293821	5295079	5293821	ID=MsG0680030561.01.T01;Parent=MsG0680030561.01;Name=MsG0680030561.01.T01;_AED=0.35;_eAED=0.36;_QI=0\|0.77\|0.8\|1\|0.33\|0.3\|10\|0\|196
Chr6	exon	5293821	5294211	5293821	ID=MsG0680030561.01.T01:exon:4372;Parent=MsG0680030561.01.T01
Chr6	exon	5294490	5294562	5294490	ID=MsG0680030561.01.T01:exon:4371;Parent=MsG0680030561.01.T01
Chr6	exon	5294678	5294773	5294678	ID=MsG0680030561.01.T01:exon:4370;Parent=MsG0680030561.01.T01
Chr6	exon	5295049	5295079	5295049	ID=MsG0680030561.01.T01:exon:4369;Parent=MsG0680030561.01.T01
Chr6	CDS	5295049	5295079	5295049	ID=MsG0680030561.01.T01:cds;Parent=MsG0680030561.01.T01
Chr6	CDS	5294678	5294773	5294678	ID=MsG0680030561.01.T01:cds;Parent=MsG0680030561.01.T01
Chr6	CDS	5294490	5294562	5294490	ID=MsG0680030561.01.T01:cds;Parent=MsG0680030561.01.T01
Chr6	CDS	5293821	5294211	5293821	ID=MsG0680030561.01.T01:cds;Parent=MsG0680030561.01.T01

Gene Sequence

>MsG0680030561.01.T01

ATGCAAGGTGCTAAGATAAGCAAAATTTCAGTGAAAGTAATTGGTAAGTTGCAAGATAGCACTGTATTTTTGAAGAAGGGCCGTGGCGATGATGAAACAGAGCTGTTTGAATTCACAAGAGATGAGGAGCAAGTGATTGATGGGCTCGATAGAGCTGTAATGACCATGAAGAAGGGTGAGGTAGCATTGTTGACTATTGCGAAACACAAAACTGCTTTCATTGAGCTGATTTCAAATCAAAGACATCTTGCGACAGAACTCGGTCGCACTGTTATGCATTTGGATGCTACAAAGGAGGAACTTATTTCTGTCATGGAGAACAAAGAGGAGTCTGATTTGATGGTTCAGAAATTCACTTTGGAGATTGCAAAATTTCACAAGGATTTGGAACAAAAAGATAAAATTTTGTCAGCAATGTTGAAGAAATCTAAATTTGATACTGCAGAAAAGCAAATGCTGTTGAAAGAGGTTAAGTTATCAAAGGTTAGAAGGAAGCATGCTGAGCATGAAACAGAAAAATGGAGAGAAGCTTCAGAAGGAAAACATGACAGACATTGCTTTAAAAACATGTTGATGCACACATTCCTTTAA

Protein sequence

>MsG0680030561.01.T01

MQGAKISKISVKVIGKLQDSTVFLKKGRGDDETELFEFTRDEEQVIDGLDRAVMTMKKGEVALLTIAKHKTAFIELISNQRHLATELGRTVMHLDATKEELISVMENKEESDLMVQKFTLEIAKFHKDLEQKDKILSAMLKKSKFDTAEKQMLLKEVKLSKVRRKHAEHETEKWREASEGKHDRHCFKNMLMHTFL*