AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0080048874.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048874.01.T01 MTR_7g075185 75.956 732 102 5 3 664 1 728 0.0 1073
MsG0080048874.01.T01 MTR_7g075170 65.710 627 126 12 3 549 1 618 0.0 691
MsG0080048874.01.T01 MTR_7g075170 69.804 510 75 7 3 433 1 510 0.0 665
MsG0080048874.01.T01 MTR_7g075370 81.728 301 55 0 540 840 1 301 1.10e-164 483
MsG0080048874.01.T01 MTR_7g075470 79.730 296 30 3 540 832 1 269 6.36e-146 432
MsG0080048874.01.T01 MTR_7g075430 74.830 147 8 3 84 223 4 128 5.87e-61 203
MsG0080048874.01.T01 MTR_7g075450 88.095 84 10 0 1 84 1 84 1.65e-46 160
MsG0080048874.01.T01 MTR_7g075420 87.059 85 11 0 445 529 23 107 1.02e-31 119
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048874.01.T01 AT1G01930 47.774 584 213 10 3 509 12 580 3.48e-155 467

Find 116 sgRNAs with CRISPR-Local

Find 501 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATAGTCACTTTCGTATT+TGG 0.138351 contig502end:+17100 MsG0080048874.01.T01:exon
ACAAATCAAACGACGGAAAT+AGG 0.190968 contig502end:-16909 MsG0080048874.01.T01:intergenic
TGAGGATTTGAAGAAAATTA+TGG 0.217654 contig502end:+16712 MsG0080048874.01.T01:exon
CATAATCTTGTCAGCATTAA+AGG 0.226174 contig502end:-17478 MsG0080048874.01.T01:intergenic
AAAATAGCCAATGATATTCT+TGG 0.256295 contig502end:+16452 MsG0080048874.01.T01:exon
CTCTCTAACACTTGTTTATT+CGG 0.257914 contig502end:-17171 MsG0080048874.01.T01:intergenic
TTTACTTGGGAAGGTGATTA+TGG 0.276458 contig502end:+16358 MsG0080048874.01.T01:exon
AGAGGAGTTCAAAACCTATT+TGG 0.302791 contig502end:+15926 MsG0080048874.01.T01:exon
GTGCAAGAGGTGAAGGAGTC+TGG 0.303169 contig502end:+16287 MsG0080048874.01.T01:exon
CTTTAATGCTGACAAGATTA+TGG 0.316887 contig502end:+17479 MsG0080048874.01.T01:exon
TGGTGCTGCTGAAGCAAAAT+TGG 0.321217 contig502end:+15986 MsG0080048874.01.T01:exon
AACCTTCGCTCTGCTTTACT+TGG 0.321565 contig502end:+16344 MsG0080048874.01.T01:exon
AGCGGCTGCATGCGGTTCTA+AGG 0.338937 contig502end:+16124 MsG0080048874.01.T01:exon
GCAATCCACAACGAAGGATA+TGG 0.342819 contig502end:+16685 MsG0080048874.01.T01:exon
GCAATCGGCTGCGAAGGATA+TGG 0.370770 contig502end:+16622 MsG0080048874.01.T01:exon
AATTACAATCTTAACAAGAT+TGG 0.370965 contig502end:-17631 MsG0080048874.01.T01:intergenic
GACTAGACCTCCAACATAAC+AGG 0.382951 contig502end:-17516 MsG0080048874.01.T01:intergenic
GGAGGAGGTTGTTGGCTTGA+AGG 0.383522 contig502end:+16577 MsG0080048874.01.T01:exon
TTGTGGGACGGGAGGTTTGA+TGG 0.384306 contig502end:+16224 MsG0080048874.01.T01:exon
GGACCAATTTCAACCTGTAC+TGG 0.385083 contig502end:+16379 MsG0080048874.01.T01:exon
GCAATCCGCAGAAAAGGATA+TGG 0.394315 contig502end:+16810 MsG0080048874.01.T01:exon
ATTTCCGTCGTTTGATTTGT+CGG 0.400918 contig502end:+16912 MsG0080048874.01.T01:exon
GCAATCCGCAGTGAAGGATA+TGG 0.401134 contig502end:+16748 MsG0080048874.01.T01:exon
TAGGATGTGAACTTGTTCTA+TGG 0.402680 contig502end:-16890 MsG0080048874.01.T01:intergenic
GTCCCAGTACAGGTTGAAAT+TGG 0.413530 contig502end:-16382 MsG0080048874.01.T01:intergenic
TGAAAATAACAAGGCGTTTG+AGG 0.414931 contig502end:+16556 MsG0080048874.01.T01:exon
ATTCAGGTCATTGTTGAACT+TGG 0.427182 contig502end:+17333 MsG0080048874.01.T01:exon
TTCAAAGGTTGTGCAGCAAT+AGG 0.429630 contig502end:-16095 MsG0080048874.01.T01:intergenic
TAAGATTGTAATTACATGTA+TGG 0.441805 contig502end:+17641 MsG0080048874.01.T01:exon
ACTCATCCAGTTAAAAGAAA+AGG 0.443104 contig502end:-17590 MsG0080048874.01.T01:intergenic
TTCTTCCTTCACCTAGGAAA+AGG 0.444488 contig502end:+16150 MsG0080048874.01.T01:exon
ATTGAAGGTAAATAAGAGAT+TGG 0.447043 contig502end:+16493 MsG0080048874.01.T01:exon
CATATCTCCAAGAATATCAT+TGG 0.447674 contig502end:-16459 MsG0080048874.01.T01:intergenic
TATGAAGAAACAAATATTGA+AGG 0.453822 contig502end:+16478 MsG0080048874.01.T01:exon
TTGCTTTCATGTCCCAGTAC+AGG 0.457106 contig502end:-16392 MsG0080048874.01.T01:intergenic
ATCATCAATTCCTGTTATGT+TGG 0.457871 contig502end:+17506 MsG0080048874.01.T01:exon
ATCAATTCCTGTTATGTTGG+AGG 0.458922 contig502end:+17509 MsG0080048874.01.T01:exon
CAATCTTAACAAGATTGGCT+TGG 0.458992 contig502end:-17626 MsG0080048874.01.T01:intergenic
TTCTCTAGTCTTCGCCAAAT+AGG 0.462663 contig502end:-15940 MsG0080048874.01.T01:intergenic
TGTGACATTGAGCATATGTT+TGG 0.471832 contig502end:+17272 MsG0080048874.01.T01:exon
TAACAAGGCGTTTGAGGAGG+AGG 0.472688 contig502end:+16562 MsG0080048874.01.T01:exon
GTCTGTTGGAAGTATTGTGT+TGG 0.479787 contig502end:+17536 MsG0080048874.01.T01:exon
GCGTTTGAGGAGGAGGTTGT+TGG 0.483740 contig502end:+16569 MsG0080048874.01.T01:exon
TTGGCTTCAAACTATAATGA+AGG 0.490853 contig502end:+17291 MsG0080048874.01.T01:exon
GAAAATTATGGATATGCTCA+AGG 0.495106 contig502end:+16724 MsG0080048874.01.T01:exon
TCAAGGGCAATCCGCAGAAA+AGG 0.496048 contig502end:+16804 MsG0080048874.01.T01:exon
TTATGTGATGGCTTATCAGT+TGG 0.503879 contig502end:-17383 MsG0080048874.01.T01:intergenic
TTGAACTCCTCTTCATTTAG+CGG 0.504328 contig502end:-15915 MsG0080048874.01.T01:intergenic
TGCGAAGGATATGGAAATTG+AGG 0.504454 contig502end:+16631 MsG0080048874.01.T01:exon
AACGAAGGATATGGAAATTG+AGG 0.505305 contig502end:+16694 MsG0080048874.01.T01:exon
ATCCGCAAGCTCAAGAGAAA+AGG 0.505901 contig502end:+16026 MsG0080048874.01.T01:exon
CTATTTATTAAGTTATGTGA+TGG 0.508552 contig502end:-17395 MsG0080048874.01.T01:intergenic
TCGCTCTGCTTTACTTGGGA+AGG 0.512764 contig502end:+16349 MsG0080048874.01.T01:exon
GACTGATATAGCATCATTGT+GGG 0.514669 contig502end:+16208 MsG0080048874.01.T01:exon
AAAATTAAGAAACTATATTC+AGG 0.516414 contig502end:+17317 MsG0080048874.01.T01:exon
CAAGGGGCAATCGGCTGCGA+AGG 0.516725 contig502end:+16616 MsG0080048874.01.T01:exon
GTATTTGGTGAAATCAATGT+TGG 0.520528 contig502end:+17115 MsG0080048874.01.T01:exon
AGAAAAGGATATGGAAATTG+AGG 0.523362 contig502end:+16819 MsG0080048874.01.T01:exon
ATATAGCATCATTGTGGGAC+GGG 0.528417 contig502end:+16213 MsG0080048874.01.T01:exon
GAAGGTAAATAAGAGATTGG+AGG 0.529817 contig502end:+16496 MsG0080048874.01.T01:exon
CATATAACATCAAAATGTAA+AGG 0.531355 contig502end:-17213 MsG0080048874.01.T01:intergenic
ACATAAAGTAGTGGGACTCA+TGG 0.533940 contig502end:+17142 MsG0080048874.01.T01:exon
CGCAAGCTCAAGAGAAAAGG+TGG 0.537712 contig502end:+16029 MsG0080048874.01.T01:exon
GCTATGAAGTCCGTGGTTGA+TGG 0.538210 contig502end:+16943 MsG0080048874.01.T01:exon
TGGTTGCATTTAGTTCGTCT+CGG 0.539262 contig502end:-16418 MsG0080048874.01.T01:intergenic
ACCTAGGAAAAGGATTAAGA+AGG 0.539456 contig502end:+16160 MsG0080048874.01.T01:exon
AAAAGATGTGCAAGAGGTGA+AGG 0.539732 contig502end:+16280 MsG0080048874.01.T01:exon
AGATACGCTCAAGGGGCAAT+CGG 0.540035 contig502end:+16607 MsG0080048874.01.T01:exon
GACCAATTTCAACCTGTACT+GGG 0.545103 contig502end:+16380 MsG0080048874.01.T01:exon
AATTTCCATATCCTTCGTTG+TGG 0.546296 contig502end:-16690 MsG0080048874.01.T01:intergenic
TCTAACACTTGTTTATTCGG+TGG 0.547689 contig502end:-17168 MsG0080048874.01.T01:intergenic
ACAGACTGCTCTGACTCAGT+TGG 0.550586 contig502end:+16523 MsG0080048874.01.T01:exon
AGTGAAGGATATGGAAATTG+AGG 0.553377 contig502end:+16757 MsG0080048874.01.T01:exon
ATGTTGGAGGTCTAGTCTGT+TGG 0.554561 contig502end:+17522 MsG0080048874.01.T01:exon
AGAGGTGAAGGAGTCTGGGT+TGG 0.561982 contig502end:+16292 MsG0080048874.01.T01:exon
AGTTATATGACATAAATAAG+TGG 0.562549 contig502end:-17678 MsG0080048874.01.T01:intergenic
ACCTTCGCTCTGCTTTACTT+GGG 0.564658 contig502end:+16345 MsG0080048874.01.T01:exon
GGAGAAGTCTTGTGTCCCAA+TGG 0.565497 contig502end:+16181 MsG0080048874.01.T01:exon
AATGTCTCCGCTAAATGAAG+AGG 0.571142 contig502end:+15908 MsG0080048874.01.T01:exon
GAAAAGTATAGATACGCTCA+AGG 0.571373 contig502end:+16787 MsG0080048874.01.T01:exon
GAAGCAAAATTGGACGTTAG+TGG 0.573636 contig502end:+15996 MsG0080048874.01.T01:exon
TGCAAGAGGTGAAGGAGTCT+GGG 0.575522 contig502end:+16288 MsG0080048874.01.T01:exon
CGAATAAACAAGTGTTAGAG+AGG 0.577699 contig502end:+17172 MsG0080048874.01.T01:exon
AAAATTATGGATATGCTCAA+GGG 0.577803 contig502end:+16725 MsG0080048874.01.T01:exon
CAAGGGGCAATCCGCAGTGA+AGG 0.579960 contig502end:+16742 MsG0080048874.01.T01:exon
CAAAATGTAAAGGTATTCAA+AGG 0.586334 contig502end:-17203 MsG0080048874.01.T01:intergenic
GGCTGCATGCGGTTCTAAGG+TGG 0.589865 contig502end:+16127 MsG0080048874.01.T01:exon
GCAGCCGCTATGTTATTCAA+AGG 0.590017 contig502end:-16110 MsG0080048874.01.T01:intergenic
GGAAAGTGTAGATACGCTCA+AGG 0.590710 contig502end:+16598 MsG0080048874.01.T01:exon
AGACTGATATAGCATCATTG+TGG 0.595329 contig502end:+16207 MsG0080048874.01.T01:exon
GTTGGTCTCACATAAAGTAG+TGG 0.598101 contig502end:+17133 MsG0080048874.01.T01:exon
TTGGTCTCACATAAAGTAGT+GGG 0.599210 contig502end:+17134 MsG0080048874.01.T01:exon
CTTCACAAAAGATGTGCAAG+AGG 0.608648 contig502end:+16274 MsG0080048874.01.T01:exon
GAAAAGCATAGATATGCTCA+AGG 0.617293 contig502end:+16661 MsG0080048874.01.T01:exon
TAGCATCATTGTGGGACGGG+AGG 0.618527 contig502end:+16216 MsG0080048874.01.T01:exon
GATATAGCATCATTGTGGGA+CGG 0.618688 contig502end:+16212 MsG0080048874.01.T01:exon
GAAAGTGTAGATACGCTCAA+GGG 0.619292 contig502end:+16599 MsG0080048874.01.T01:exon
CAAGCTCAAGAGAAAAGGTG+GGG 0.619925 contig502end:+16031 MsG0080048874.01.T01:exon
AAATTATGGATATGCTCAAG+GGG 0.636169 contig502end:+16726 MsG0080048874.01.T01:exon
TCCCAAGTAAAGCAGAGCGA+AGG 0.644285 contig502end:-16346 MsG0080048874.01.T01:intergenic
TCCGTCGTTTGATTTGTCGG+AGG 0.644378 contig502end:+16915 MsG0080048874.01.T01:exon
GGCTGACGCTATGAAGTCCG+TGG 0.644824 contig502end:+16936 MsG0080048874.01.T01:exon
GCAAGCTCAAGAGAAAAGGT+GGG 0.656480 contig502end:+16030 MsG0080048874.01.T01:exon
AATAACATAGCGGCTGCATG+CGG 0.657907 contig502end:+16116 MsG0080048874.01.T01:exon
AAAGTGTAGATACGCTCAAG+GGG 0.663205 contig502end:+16600 MsG0080048874.01.T01:exon
AGGTGGTTCTTCCTTCACCT+AGG 0.663668 contig502end:+16144 MsG0080048874.01.T01:exon
AAAAGTATAGATACGCTCAA+GGG 0.669017 contig502end:+16788 MsG0080048874.01.T01:exon
AAATAACAAGGCGTTTGAGG+AGG 0.669156 contig502end:+16559 MsG0080048874.01.T01:exon
AAGCTCAAGAGAAAAGGTGG+GGG 0.678103 contig502end:+16032 MsG0080048874.01.T01:exon
CAAGGTGCAATCCACAACGA+AGG 0.693173 contig502end:+16679 MsG0080048874.01.T01:exon
GAATAAACAAGTGTTAGAGA+GGG 0.699763 contig502end:+17173 MsG0080048874.01.T01:exon
GCCTCCGACAAATCAAACGA+CGG 0.707717 contig502end:-16916 MsG0080048874.01.T01:intergenic
AAAAGCTAGTGAGATGCTTG+TGG 0.710178 contig502end:+16316 MsG0080048874.01.T01:exon
GGTTCTGTGTCTGAAAGTGA+CGG 0.718841 contig502end:-16074 MsG0080048874.01.T01:intergenic
AATTTCCATATCCTTCACTG+CGG 0.750466 contig502end:-16753 MsG0080048874.01.T01:intergenic
ACAACCTTTGAATAACATAG+CGG 0.758788 contig502end:+16106 MsG0080048874.01.T01:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAATGAATAAGAAAAT+AGG - contig502end:11824-11843 MsG0080048874.01.T01:intergenic 10.0%
!! GTAAAAATAAAAAACATAAA+CGG + contig502end:15483-15502 MsG0080048874.01.T01:intron 10.0%
!!! AATTTAAAATGATTTATGTT+TGG + contig502end:10768-10787 MsG0080048874.01.T01:intron 10.0%
!! AAAATTAAGAAACTATATTC+AGG + contig502end:17317-17336 MsG0080048874.01.T01:exon 15.0%
!! ATTTACTGAATAATTGTAAA+CGG + contig502end:11857-11876 MsG0080048874.01.T01:intron 15.0%
!! GAGATTTATACAATAAAATA+TGG + contig502end:11444-11463 MsG0080048874.01.T01:intron 15.0%
!! GTAAAATAATTGTATATTGA+CGG + contig502end:10726-10745 MsG0080048874.01.T01:intron 15.0%
!!! GTAATTAAAAAGTAGATTTT+GGG - contig502end:15448-15467 MsG0080048874.01.T01:intergenic 15.0%
!!! TAATATAGTATTCTCTAAAA+GGG - contig502end:14695-14714 MsG0080048874.01.T01:intergenic 15.0%
!!! TACTTATAAATTGTTTTACA+AGG + contig502end:12158-12177 MsG0080048874.01.T01:intron 15.0%
!!! TCGTTACTAAATATTTTAAA+AGG + contig502end:11397-11416 MsG0080048874.01.T01:intron 15.0%
!!! TGTAATTAAAAAGTAGATTT+TGG - contig502end:15449-15468 MsG0080048874.01.T01:intergenic 15.0%
!!! TGTTTAATATTTTAATCTTC+TGG + contig502end:15068-15087 MsG0080048874.01.T01:intron 15.0%
!!! TTTAATTACATACTAGATTT+TGG + contig502end:15459-15478 MsG0080048874.01.T01:intron 15.0%
!!! TTTATTCAAGCTTTTTTATT+GGG + contig502end:10444-10463 MsG0080048874.01.T01:intron 15.0%
!!! TTTTATTCAAGCTTTTTTAT+TGG + contig502end:10443-10462 MsG0080048874.01.T01:intron 15.0%
!!! TTTTTATCTAAAAAACAAAC+AGG + contig502end:15097-15116 MsG0080048874.01.T01:intron 15.0%
!! AAAATAAAAAACATAAACGG+TGG + contig502end:15486-15505 MsG0080048874.01.T01:intron 20.0%
!! AAAATACATTATCGAAACAT+CGG - contig502end:15845-15864 MsG0080048874.01.T01:intergenic 20.0%
!! AAAGAATTACAGAGAAATTA+TGG - contig502end:15407-15426 MsG0080048874.01.T01:intergenic 20.0%
!! AAGAATTACAGAGAAATTAT+GGG - contig502end:15406-15425 MsG0080048874.01.T01:intergenic 20.0%
!! AATTACAATCTTAACAAGAT+TGG - contig502end:17634-17653 MsG0080048874.01.T01:intergenic 20.0%
!! ACATTACTAAATTGATCTTA+TGG + contig502end:11494-11513 MsG0080048874.01.T01:intron 20.0%
!! AGAACATTAGTAAGTAAAAT+TGG - contig502end:12246-12265 MsG0080048874.01.T01:intergenic 20.0%
!! AGTTATATGACATAAATAAG+TGG - contig502end:17681-17700 MsG0080048874.01.T01:intergenic 20.0%
!! ATAAATAGCTTTCAATAACA+AGG - contig502end:13758-13777 MsG0080048874.01.T01:intergenic 20.0%
!! ATACAGTGAAAACAAATAAA+TGG - contig502end:14847-14866 MsG0080048874.01.T01:intergenic 20.0%
!! CATATAACATCAAAATGTAA+AGG - contig502end:17216-17235 MsG0080048874.01.T01:intergenic 20.0%
!! CATTACTAAATTGATCTTAT+GGG + contig502end:11495-11514 MsG0080048874.01.T01:intron 20.0%
!! CTAATATAGTATTCTCTAAA+AGG - contig502end:14696-14715 MsG0080048874.01.T01:intergenic 20.0%
!! CTATTTATTAAGTTATGTGA+TGG - contig502end:17398-17417 MsG0080048874.01.T01:intergenic 20.0%
!! TAAATAGCTTTCAATAACAA+GGG - contig502end:13757-13776 MsG0080048874.01.T01:intergenic 20.0%
!! TAAGATTGTAATTACATGTA+TGG + contig502end:17641-17660 MsG0080048874.01.T01:exon 20.0%
!! TATGAAGAAACAAATATTGA+AGG + contig502end:16478-16497 MsG0080048874.01.T01:exon 20.0%
!! TATGTAGCTAAAAAACAAAA+GGG - contig502end:17002-17021 MsG0080048874.01.T01:intergenic 20.0%
!! TTATGTAGCTAAAAAACAAA+AGG - contig502end:17003-17022 MsG0080048874.01.T01:intergenic 20.0%
!! TTTATTTATTCAGTTCAGAA+TGG + contig502end:13664-13683 MsG0080048874.01.T01:intron 20.0%
!!! AGATATAAACATTGCTATTT+TGG + contig502end:14602-14621 MsG0080048874.01.T01:intron 20.0%
!!! ATACTATATTAGAGTCTTAT+TGG + contig502end:14704-14723 MsG0080048874.01.T01:intron 20.0%
!!! ATAGAGTTCCATTTTAAAAA+TGG - contig502end:14103-14122 MsG0080048874.01.T01:intergenic 20.0%
!!! ATTTTTTACTTCAATTCGTT+AGG + contig502end:14160-14179 MsG0080048874.01.T01:intron 20.0%
!!! TAATAAACCTTTTTAAATGC+AGG - contig502end:12019-12038 MsG0080048874.01.T01:intergenic 20.0%
!!! TTGACTTTTTATTGCTATTT+AGG + contig502end:13872-13891 MsG0080048874.01.T01:intron 20.0%
!!! TTTTACCTCCATTTTTAAAA+TGG + contig502end:14092-14111 MsG0080048874.01.T01:intron 20.0%
!!! TTTTGTGTTTCAATCATATA+CGG + contig502end:14423-14442 MsG0080048874.01.T01:intron 20.0%
!!! TTTTTTACTTCAATTCGTTA+GGG + contig502end:14161-14180 MsG0080048874.01.T01:intron 20.0%
! AAAATAGCCAATGATATTCT+TGG + contig502end:16452-16471 MsG0080048874.01.T01:exon 25.0%
! AAAATAGGAAGATAGGTATT+TGG - contig502end:11809-11828 MsG0080048874.01.T01:intergenic 25.0%
! AAAATTATGGATATGCTCAA+GGG + contig502end:16725-16744 MsG0080048874.01.T01:exon 25.0%
! AAATCAAGAAAACTTTCAGA+AGG + contig502end:12733-12752 MsG0080048874.01.T01:CDS 25.0%
! AAATGTTATTGGCAGTAAAA+GGG + contig502end:12960-12979 MsG0080048874.01.T01:intron 25.0%
! AAATTTCACAATGAGAATGA+GGG + contig502end:11639-11658 MsG0080048874.01.T01:intron 25.0%
! AACAAAAACACAGATAAAGA+AGG + contig502end:13600-13619 MsG0080048874.01.T01:intron 25.0%
! AGAGTTATCGAAAATGATTT+CGG - contig502end:15627-15646 MsG0080048874.01.T01:intergenic 25.0%
! AGGTATGTATGATATGATAT+AGG - contig502end:11777-11796 MsG0080048874.01.T01:intergenic 25.0%
! ATTGAAGGTAAATAAGAGAT+TGG + contig502end:16493-16512 MsG0080048874.01.T01:exon 25.0%
! CAAGTTAGAATAAATTCTAG+AGG + contig502end:10879-10898 MsG0080048874.01.T01:intron 25.0%
! GAAAAAGACTGAAAATAACA+AGG + contig502end:16547-16566 MsG0080048874.01.T01:exon 25.0%
! GAATAAGAAAATAGGAAGAT+AGG - contig502end:11816-11835 MsG0080048874.01.T01:intergenic 25.0%
! GATAAACTTATGTTGATCAT+AGG + contig502end:10971-10990 MsG0080048874.01.T01:intron 25.0%
! GATAATGAATTTGATGTTGA+TGG + contig502end:15789-15808 MsG0080048874.01.T01:intron 25.0%
! TAAATGTTATTGGCAGTAAA+AGG + contig502end:12959-12978 MsG0080048874.01.T01:intron 25.0%
! TAAATTTCACAATGAGAATG+AGG + contig502end:11638-11657 MsG0080048874.01.T01:intron 25.0%
! TAATGAATTACAACAGGAAA+AGG - contig502end:15279-15298 MsG0080048874.01.T01:intergenic 25.0%
! TATAAATCTGGACTGATTAT+TGG + contig502end:12306-12325 MsG0080048874.01.T01:intron 25.0%
! TATGATTGAAACACAAAACA+TGG - contig502end:14421-14440 MsG0080048874.01.T01:intergenic 25.0%
! TGAGGATTTGAAGAAAATTA+TGG + contig502end:16712-16731 MsG0080048874.01.T01:exon 25.0%
! TGCAAAGCTATATATAAATC+TGG + contig502end:12294-12313 MsG0080048874.01.T01:intron 25.0%
! TGCAGTATTTGTAATTAAAC+AGG - contig502end:15325-15344 MsG0080048874.01.T01:intergenic 25.0%
! TTATCAAGAACAATGTAAGA+AGG - contig502end:10956-10975 MsG0080048874.01.T01:intergenic 25.0%
! TTATCTAAAAAACAAACAGG+AGG + contig502end:15100-15119 MsG0080048874.01.T01:intron 25.0%
! TTGTAATTAAACAGGTGTAA+AGG - contig502end:15317-15336 MsG0080048874.01.T01:intergenic 25.0%
! TTGTGAATTATGAAAATGAG+AGG + contig502end:14310-14329 MsG0080048874.01.T01:intron 25.0%
!! AGATAAATCTCGAATCTTTT+AGG - contig502end:14192-14211 MsG0080048874.01.T01:intergenic 25.0%
!! AGTACATAGCCAATTTTAAA+CGG + contig502end:10043-10062 MsG0080048874.01.T01:exon 25.0%
!! TATTAGCATAGTTTGTCAAT+AGG + contig502end:13270-13289 MsG0080048874.01.T01:intron 25.0%
!! TTATAACACCACAATGTTTT+CGG + contig502end:14026-14045 MsG0080048874.01.T01:intron 25.0%
!! TTGTTACCTTTTCTTTTAAC+TGG + contig502end:17584-17603 MsG0080048874.01.T01:exon 25.0%
!!! ATATTTGTTGATTTGTGTTC+AGG + contig502end:14467-14486 MsG0080048874.01.T01:intron 25.0%
!!! CAAAATGTAAAGGTATTCAA+AGG - contig502end:17206-17225 MsG0080048874.01.T01:intergenic 25.0%
!!! CAAATAGAAGCATCAAAATA+AGG - contig502end:12378-12397 MsG0080048874.01.T01:intergenic 25.0%
!!! CATTTACAAATCTTTAGAAC+TGG + contig502end:14867-14886 MsG0080048874.01.T01:intron 25.0%
!!! GGCTATTTTCAATTTTTCTT+TGG - contig502end:16441-16460 MsG0080048874.01.T01:intergenic 25.0%
!!! TTGATAGTGTTAACAAATAC+TGG + contig502end:14211-14230 MsG0080048874.01.T01:intron 25.0%
!!! TTTTGATGTAGAAAAGTGTT+AGG + contig502end:17069-17088 MsG0080048874.01.T01:exon 25.0%
AAAGTCAAGATCTTAAGCAA+AGG - contig502end:13860-13879 MsG0080048874.01.T01:intergenic 30.0%
AAATTATGGATATGCTCAAG+GGG + contig502end:16726-16745 MsG0080048874.01.T01:exon 30.0%
AAGCAGAGAATATTATCTCA+AGG - contig502end:14250-14269 MsG0080048874.01.T01:intergenic 30.0%
AAGGTGATTCTGATATATCT+AGG + contig502end:12849-12868 MsG0080048874.01.T01:intron 30.0%
AAGTAAACACACATGACATT+AGG - contig502end:12143-12162 MsG0080048874.01.T01:intergenic 30.0%
AATATGATCAATGTGGTTTG+AGG - contig502end:10241-10260 MsG0080048874.01.T01:intergenic 30.0%
AATGACCTAAAATATTGCAC+AGG - contig502end:13543-13562 MsG0080048874.01.T01:intergenic 30.0%
AATGCCATTGTTAGTTGTAA+TGG - contig502end:10111-10130 MsG0080048874.01.T01:intergenic 30.0%
ACAAACAGGAGGAAATAAAA+AGG + contig502end:15111-15130 MsG0080048874.01.T01:intron 30.0%
ACAACCTTTGAATAACATAG+CGG + contig502end:16106-16125 MsG0080048874.01.T01:exon 30.0%
ACAGAAGATAAATTGCAGAA+TGG - contig502end:14963-14982 MsG0080048874.01.T01:intergenic 30.0%
ACTCATCCAGTTAAAAGAAA+AGG - contig502end:17593-17612 MsG0080048874.01.T01:intergenic 30.0%
AGAAAAGGATATGGAAATTG+AGG + contig502end:16819-16838 MsG0080048874.01.T01:exon 30.0%
AGCAAGTAATGAATTACAAC+AGG - contig502end:15285-15304 MsG0080048874.01.T01:intergenic 30.0%
AGGTCATTATATGTGTCATA+GGG + contig502end:13555-13574 MsG0080048874.01.T01:intron 30.0%
ATATGATCAATGTGGTTTGA+GGG - contig502end:10240-10259 MsG0080048874.01.T01:intergenic 30.0%
ATCAAGTCCTTACAACTTAT+GGG - contig502end:15768-15787 MsG0080048874.01.T01:intergenic 30.0%
ATCATCAATTCCTGTTATGT+TGG + contig502end:17506-17525 MsG0080048874.01.T01:exon 30.0%
ATCGATGAATATCAGATTTG+AGG - contig502end:10347-10366 MsG0080048874.01.T01:intergenic 30.0%
ATGCCATTGTTAGTTGTAAT+GGG - contig502end:10110-10129 MsG0080048874.01.T01:intergenic 30.0%
ATTTCTAACACATTGTGGAT+TGG - contig502end:12466-12485 MsG0080048874.01.T01:intergenic 30.0%
CAAACAGGAGGAAATAAAAA+GGG + contig502end:15112-15131 MsG0080048874.01.T01:intron 30.0%
CATAATCTTGTCAGCATTAA+AGG - contig502end:17481-17500 MsG0080048874.01.T01:intergenic 30.0%
CATATCTCCAAGAATATCAT+TGG - contig502end:16462-16481 MsG0080048874.01.T01:intergenic 30.0%
CTCTCTAACACTTGTTTATT+CGG - contig502end:17174-17193 MsG0080048874.01.T01:intergenic 30.0%
CTTGTTTATGTCTTCAATTG+CGG + contig502end:13725-13744 MsG0080048874.01.T01:intron 30.0%
CTTTAATGCTGACAAGATTA+TGG + contig502end:17479-17498 MsG0080048874.01.T01:exon 30.0%
GAAAACTTTCAGAAGGTTTA+TGG + contig502end:12740-12759 MsG0080048874.01.T01:CDS 30.0%
GAAAATTATGGATATGCTCA+AGG + contig502end:16724-16743 MsG0080048874.01.T01:exon 30.0%
GAAATGAAAAACTCAACTCA+TGG - contig502end:13927-13946 MsG0080048874.01.T01:intergenic 30.0%
GAATAAACAAGTGTTAGAGA+GGG + contig502end:17173-17192 MsG0080048874.01.T01:exon 30.0%
GGTTAATAGTGATTATTTGC+TGG + contig502end:14575-14594 MsG0080048874.01.T01:intron 30.0%
GTCAAGAATCATGATCAATA+GGG - contig502end:12200-12219 MsG0080048874.01.T01:intergenic 30.0%
TAAAAAACATAAACGGTGGA+AGG + contig502end:15490-15509 MsG0080048874.01.T01:intron 30.0%
TAAAATATTGCACAGGAAAC+AGG - contig502end:13536-13555 MsG0080048874.01.T01:intergenic 30.0%
TACAAGATGAACATAGTGAA+GGG - contig502end:10390-10409 MsG0080048874.01.T01:intergenic 30.0%
TACAAGGTAGCAATGATAAT+TGG + contig502end:12174-12193 MsG0080048874.01.T01:intron 30.0%
TAGGTATTTGGTCAATTATG+AGG - contig502end:11797-11816 MsG0080048874.01.T01:intergenic 30.0%
TAGGTCATTATATGTGTCAT+AGG + contig502end:13554-13573 MsG0080048874.01.T01:intron 30.0%
TATCAAGTCCTTACAACTTA+TGG - contig502end:15769-15788 MsG0080048874.01.T01:intergenic 30.0%
TGTCAAGAATCATGATCAAT+AGG - contig502end:12201-12220 MsG0080048874.01.T01:intergenic 30.0%
TGTTCCTGTTTAGAAAATCA+TGG - contig502end:15551-15570 MsG0080048874.01.T01:intergenic 30.0%
TGTTGTAATTCATTACTTGC+TGG + contig502end:15284-15303 MsG0080048874.01.T01:CDS 30.0%
TGTTTAGAAAATCATGGTGA+AGG - contig502end:15545-15564 MsG0080048874.01.T01:intergenic 30.0%
TTACAAGATGAACATAGTGA+AGG - contig502end:10391-10410 MsG0080048874.01.T01:intergenic 30.0%
TTGGCTTCAAACTATAATGA+AGG + contig502end:17291-17310 MsG0080048874.01.T01:exon 30.0%
TTGTGATTCTTCCATTTCTT+TGG - contig502end:12820-12839 MsG0080048874.01.T01:intergenic 30.0%
! AAAAGTATAGATACGCTCAA+GGG + contig502end:16788-16807 MsG0080048874.01.T01:exon 30.0%
! AATTTCCATATCCTTTTCTG+CGG - contig502end:16818-16837 MsG0080048874.01.T01:intergenic 30.0%
! AGAAGGCTTAAAACAGATTT+TGG - contig502end:10939-10958 MsG0080048874.01.T01:intergenic 30.0%
! CTATATCAGTCTTTTCCATT+GGG - contig502end:16199-16218 MsG0080048874.01.T01:intergenic 30.0%
! GAAATCATTTTCGATAACTC+TGG + contig502end:15626-15645 MsG0080048874.01.T01:intron 30.0%
! GAATTTTACTGCATATCTCT+CGG - contig502end:15729-15748 MsG0080048874.01.T01:intergenic 30.0%
! GTACATAGCCAATTTTAAAC+GGG + contig502end:10044-10063 MsG0080048874.01.T01:exon 30.0%
! GTATTTGGTGAAATCAATGT+TGG + contig502end:17115-17134 MsG0080048874.01.T01:exon 30.0%
! GTTTGATGGAATGAATTTTG+TGG + contig502end:16238-16257 MsG0080048874.01.T01:exon 30.0%
! TATAACACCACAATGTTTTC+GGG + contig502end:14027-14046 MsG0080048874.01.T01:intron 30.0%
! TCAATAGTCACTTTCGTATT+TGG + contig502end:17100-17119 MsG0080048874.01.T01:exon 30.0%
! TCTTTTTATTCTGTTCTCTC+TGG + contig502end:14659-14678 MsG0080048874.01.T01:intron 30.0%
! TGTTTCCTGTGCAATATTTT+AGG + contig502end:13535-13554 MsG0080048874.01.T01:intron 30.0%
! TTCACCATGATTTTCTAAAC+AGG + contig502end:15544-15563 MsG0080048874.01.T01:intron 30.0%
! TTTTGTTCCCATAAGTTGTA+AGG + contig502end:15758-15777 MsG0080048874.01.T01:intron 30.0%
!! AAAACAGATTTTGGTATGCT+TGG - contig502end:10930-10949 MsG0080048874.01.T01:intergenic 30.0%
!! AAACCTGTTTTAAATGAGGA+CGG + contig502end:10904-10923 MsG0080048874.01.T01:intron 30.0%
!! AGAGACATAGTTTTGCAATT+TGG + contig502end:15966-15985 MsG0080048874.01.T01:exon 30.0%
!! CATGTTGTTACTTGTTATGT+AGG + contig502end:15882-15901 MsG0080048874.01.T01:intron 30.0%
!! CATTAGGAGTTCTAAAGTAT+TGG - contig502end:12127-12146 MsG0080048874.01.T01:intergenic 30.0%
!! CGTTTTGAATATGATCAATG+TGG - contig502end:10248-10267 MsG0080048874.01.T01:intergenic 30.0%
!! CTTTTGTTTAAAGCTTTCAC+CGG - contig502end:11138-11157 MsG0080048874.01.T01:intergenic 30.0%
!! GACTTGCTGATAAATGTTAT+TGG + contig502end:12949-12968 MsG0080048874.01.T01:intron 30.0%
!! GAGTTCCATTTTAAAAATGG+AGG - contig502end:14100-14119 MsG0080048874.01.T01:intergenic 30.0%
!! TTTGTTTTCTCGATTGTTGT+TGG + contig502end:13825-13844 MsG0080048874.01.T01:intron 30.0%
!!! AACATTGCTATTTTGGTGTT+TGG + contig502end:14609-14628 MsG0080048874.01.T01:intron 30.0%
!!! TATTAGTTTTCCATCAACCA+CGG - contig502end:16956-16975 MsG0080048874.01.T01:intergenic 30.0%
AAATCATAGTTGTCGATCAC+CGG - contig502end:14075-14094 MsG0080048874.01.T01:intergenic 35.0%
AACGAAGGATATGGAAATTG+AGG + contig502end:16694-16713 MsG0080048874.01.T01:exon 35.0%
AATAGCCAATACTGTAACCA+CGG - contig502end:13961-13980 MsG0080048874.01.T01:intergenic 35.0%
AATTTCCATATCCTTCACTG+CGG - contig502end:16756-16775 MsG0080048874.01.T01:intergenic 35.0%
AATTTCCATATCCTTCGTTG+TGG - contig502end:16693-16712 MsG0080048874.01.T01:intergenic 35.0%
ACAAATCAAACGACGGAAAT+AGG - contig502end:16912-16931 MsG0080048874.01.T01:intergenic 35.0%
ACATGATTCACAATTCACGT+TGG + contig502end:10496-10515 MsG0080048874.01.T01:intron 35.0%
ACCTAGGAAAAGGATTAAGA+AGG + contig502end:16160-16179 MsG0080048874.01.T01:exon 35.0%
AGAAAAGCCAAACAACTATC+TGG - contig502end:11703-11722 MsG0080048874.01.T01:intergenic 35.0%
AGAATATTATCTCAAGGAGC+AGG - contig502end:14244-14263 MsG0080048874.01.T01:intergenic 35.0%
AGACTGATATAGCATCATTG+TGG + contig502end:16207-16226 MsG0080048874.01.T01:exon 35.0%
AGAGGAGTTCAAAACCTATT+TGG + contig502end:15926-15945 MsG0080048874.01.T01:exon 35.0%
AGCATAAAAATCACCACGTT+TGG + contig502end:10828-10847 MsG0080048874.01.T01:intron 35.0%
AGTACTAAAGCAAACGTGTA+TGG - contig502end:10573-10592 MsG0080048874.01.T01:intergenic 35.0%
AGTGAAGGATATGGAAATTG+AGG + contig502end:16757-16776 MsG0080048874.01.T01:exon 35.0%
AGTTTCCTTTGTATTGGGAA+AGG + contig502end:15657-15676 MsG0080048874.01.T01:intron 35.0%
AGTTTCTCCAGATAGTTGTT+TGG + contig502end:11693-11712 MsG0080048874.01.T01:intron 35.0%
ATAAAAATCACCACGTTTGG+AGG + contig502end:10831-10850 MsG0080048874.01.T01:intron 35.0%
ATCAATTCCTGTTATGTTGG+AGG + contig502end:17509-17528 MsG0080048874.01.T01:exon 35.0%
ATCCGTGCATTAAAGATGAA+AGG + contig502end:12676-12695 MsG0080048874.01.T01:CDS 35.0%
ATGACGTAACAACTCATCAT+TGG - contig502end:10633-10652 MsG0080048874.01.T01:intergenic 35.0%
ATTCAGGTCATTGTTGAACT+TGG + contig502end:17333-17352 MsG0080048874.01.T01:exon 35.0%
ATTTGTTCATGCACCACAAA+AGG - contig502end:14282-14301 MsG0080048874.01.T01:intergenic 35.0%
CAAAAATCCTCGAGACTAAA+TGG - contig502end:17032-17051 MsG0080048874.01.T01:intergenic 35.0%
CAAATCTTGACAAATGGGAT+TGG + contig502end:12766-12785 MsG0080048874.01.T01:CDS 35.0%
CAACGAACCTGCATTTAAAA+AGG + contig502end:12009-12028 MsG0080048874.01.T01:CDS 35.0%
CGAATAAACAAGTGTTAGAG+AGG + contig502end:17172-17191 MsG0080048874.01.T01:exon 35.0%
CTGCAATTTATCTTCTGTCT+TGG + contig502end:14965-14984 MsG0080048874.01.T01:intron 35.0%
CTGTGATGTGTCAAGTATAT+CGG + contig502end:11070-11089 MsG0080048874.01.T01:CDS 35.0%
CTTAACGTGCAATACATGTA+AGG + contig502end:10287-10306 MsG0080048874.01.T01:CDS 35.0%
CTTTGACAAAATCAGATGTC+CGG - contig502end:11049-11068 MsG0080048874.01.T01:intergenic 35.0%
GAAAAATACTGTGAAGGAAG+AGG + contig502end:11013-11032 MsG0080048874.01.T01:CDS 35.0%
GAAAATGAGTCTGGTAAATC+CGG + contig502end:11116-11135 MsG0080048874.01.T01:CDS 35.0%
GAACAATGTCATGTGCATTT+CGG - contig502end:15585-15604 MsG0080048874.01.T01:intergenic 35.0%
GAAGGTAAATAAGAGATTGG+AGG + contig502end:16496-16515 MsG0080048874.01.T01:exon 35.0%
GACTGATATAGCATCATTGT+GGG + contig502end:16208-16227 MsG0080048874.01.T01:exon 35.0%
GCAACATTTCTAACACATTG+TGG - contig502end:12471-12490 MsG0080048874.01.T01:intergenic 35.0%
GCACAAGTTTCCTTTGTATT+GGG + contig502end:15652-15671 MsG0080048874.01.T01:intron 35.0%
GGCTTCAAATCTTGACAAAT+GGG + contig502end:12761-12780 MsG0080048874.01.T01:CDS 35.0%
GTTAACAGTGAAAATGAGTC+TGG + contig502end:11107-11126 MsG0080048874.01.T01:CDS 35.0%
GTTTCCTTTGTATTGGGAAA+GGG + contig502end:15658-15677 MsG0080048874.01.T01:intron 35.0%
TACATTGTCATCCATCTTCT+AGG - contig502end:15379-15398 MsG0080048874.01.T01:intergenic 35.0%
TAGCTCACAAGACATTTCAT+AGG + contig502end:11360-11379 MsG0080048874.01.T01:CDS 35.0%
TATATGTGTCATAGGGCAAA+TGG + contig502end:13562-13581 MsG0080048874.01.T01:intron 35.0%
TATTCAAAACGCCGTTGTTT+CGG + contig502end:10257-10276 MsG0080048874.01.T01:CDS 35.0%
TATTGGCATGCTCATATTGT+AGG + contig502end:12323-12342 MsG0080048874.01.T01:intron 35.0%
TCCGTGCATTAAAGATGAAA+GGG + contig502end:12677-12696 MsG0080048874.01.T01:CDS 35.0%
TCTAACACTTGTTTATTCGG+TGG - contig502end:17171-17190 MsG0080048874.01.T01:intergenic 35.0%
TCTTCAGAATATTTGTAGCC+AGG - contig502end:14373-14392 MsG0080048874.01.T01:intergenic 35.0%
TCTTCCATTTCTTTGGTCAA+TGG - contig502end:12813-12832 MsG0080048874.01.T01:intergenic 35.0%
TGGCTTCAAATCTTGACAAA+TGG + contig502end:12760-12779 MsG0080048874.01.T01:CDS 35.0%
TGTAAAGGTTATGGAACTCT+TGG + contig502end:12641-12660 MsG0080048874.01.T01:CDS 35.0%
TGTGACATTGAGCATATGTT+TGG + contig502end:17272-17291 MsG0080048874.01.T01:exon 35.0%
TGTGATGTGTCAAGTATATC+GGG + contig502end:11071-11090 MsG0080048874.01.T01:CDS 35.0%
TTATGTGATGGCTTATCAGT+TGG - contig502end:17386-17405 MsG0080048874.01.T01:intergenic 35.0%
TTCAGTCTCTATGTAGTATG+AGG + contig502end:13210-13229 MsG0080048874.01.T01:intron 35.0%
TTGAACTCCTCTTCATTTAG+CGG - contig502end:15918-15937 MsG0080048874.01.T01:intergenic 35.0%
TTGGTCTCACATAAAGTAGT+GGG + contig502end:17134-17153 MsG0080048874.01.T01:exon 35.0%
TTGTCCATTGACCAAAGAAA+TGG + contig502end:12806-12825 MsG0080048874.01.T01:CDS 35.0%
TTTACTTGGGAAGGTGATTA+TGG + contig502end:16358-16377 MsG0080048874.01.T01:exon 35.0%
! AACAGCGTCTTTAGAAATTG+TGG + contig502end:13370-13389 MsG0080048874.01.T01:intron 35.0%
! ACTATTAGCCGGAATTTTGA+GGG - contig502end:15192-15211 MsG0080048874.01.T01:intergenic 35.0%
! ACTTAGTAACGTCCCTTTTA+AGG - contig502end:13442-13461 MsG0080048874.01.T01:intergenic 35.0%
! AGTTTTTCCATTTAGTCTCG+AGG + contig502end:17022-17041 MsG0080048874.01.T01:exon 35.0%
! ATAACACCACAATGTTTTCG+GGG + contig502end:14028-14047 MsG0080048874.01.T01:intron 35.0%
! ATAGCCAATTTTAAACGGGT+TGG + contig502end:10048-10067 MsG0080048874.01.T01:exon 35.0%
! ATTGTTAGTTGTAATGGGAG+GGG - contig502end:10105-10124 MsG0080048874.01.T01:intergenic 35.0%
! CAATCTTAACAAGATTGGCT+TGG - contig502end:17629-17648 MsG0080048874.01.T01:intergenic 35.0%
! CATTGTTAGTTGTAATGGGA+GGG - contig502end:10106-10125 MsG0080048874.01.T01:intergenic 35.0%
! CTTAGTAACGTCCCTTTTAA+GGG - contig502end:13441-13460 MsG0080048874.01.T01:intergenic 35.0%
! GAAAAGCATAGATATGCTCA+AGG + contig502end:16661-16680 MsG0080048874.01.T01:exon 35.0%
! GAAAAGTATAGATACGCTCA+AGG + contig502end:16787-16806 MsG0080048874.01.T01:exon 35.0%
! GCTATATCAGTCTTTTCCAT+TGG - contig502end:16200-16219 MsG0080048874.01.T01:intergenic 35.0%
! TACTATTAGCCGGAATTTTG+AGG - contig502end:15193-15212 MsG0080048874.01.T01:intergenic 35.0%
! TAGGATGTGAACTTGTTCTA+TGG - contig502end:16893-16912 MsG0080048874.01.T01:intergenic 35.0%
! TCATTTTCGATAACTCTGGA+TGG + contig502end:15630-15649 MsG0080048874.01.T01:intron 35.0%
! TCCTTCTTAATCCTTTTCCT+AGG - contig502end:16164-16183 MsG0080048874.01.T01:intergenic 35.0%
! TCTTTAGAAATTGTGGCCAA+TGG + contig502end:13377-13396 MsG0080048874.01.T01:intron 35.0%
! TGAAAATAACAAGGCGTTTG+AGG + contig502end:16556-16575 MsG0080048874.01.T01:exon 35.0%
! TTAATCCTTTTCCTAGGTGA+AGG - contig502end:16158-16177 MsG0080048874.01.T01:intergenic 35.0%
!! ATTTCCGTCGTTTGATTTGT+CGG + contig502end:16912-16931 MsG0080048874.01.T01:exon 35.0%
!! CATTGTGGATTGGTAAAACA+TGG - contig502end:12456-12475 MsG0080048874.01.T01:intergenic 35.0%
!! GGCAAAACCTGTTTTAAATG+AGG + contig502end:10900-10919 MsG0080048874.01.T01:intron 35.0%
!!! CTAGTTACTTTTAGCCTTAC+AGG + contig502end:13792-13811 MsG0080048874.01.T01:intron 35.0%
!!! TATGGCTGACTGTTTTTTTC+CGG - contig502end:11939-11958 MsG0080048874.01.T01:intergenic 35.0%
!!! TTATCAAGGTGGTTTTGACA+AGG + contig502end:16867-16886 MsG0080048874.01.T01:exon 35.0%
AAAAGATGTGCAAGAGGTGA+AGG + contig502end:16280-16299 MsG0080048874.01.T01:exon 40.0%
AAAAGCTAGTGAGATGCTTG+TGG + contig502end:16316-16335 MsG0080048874.01.T01:exon 40.0%
AAAGTGTAGATACGCTCAAG+GGG + contig502end:16600-16619 MsG0080048874.01.T01:exon 40.0%
AACAACTCATCATTGGATGC+AGG - contig502end:10626-10645 MsG0080048874.01.T01:intergenic 40.0%
AACCCTAAACGACCCTTAAA+AGG + contig502end:13426-13445 MsG0080048874.01.T01:intron 40.0%
AAGCAGAACAATCCTCAATC+GGG - contig502end:11291-11310 MsG0080048874.01.T01:intergenic 40.0%
AATGGATGCCCTCAAAATTC+CGG + contig502end:15181-15200 MsG0080048874.01.T01:CDS 40.0%
AATGTCTCCGCTAAATGAAG+AGG + contig502end:15908-15927 MsG0080048874.01.T01:exon 40.0%
ACCCTAAACGACCCTTAAAA+GGG + contig502end:13427-13446 MsG0080048874.01.T01:intron 40.0%
ACGTGAAGCAGAAGAAAAGA+AGG + contig502end:13167-13186 MsG0080048874.01.T01:CDS 40.0%
ACTCTCATACTTCATGGCTT+TGG + contig502end:14341-14360 MsG0080048874.01.T01:intron 40.0%
AGAATCACAAGCTGCTATGA+AGG + contig502end:12830-12849 MsG0080048874.01.T01:CDS 40.0%
AGCCCAGATAGGAAGTAAAA+TGG - contig502end:13493-13512 MsG0080048874.01.T01:intergenic 40.0%
AGGTGAAACTGACAATTGCT+GGG + contig502end:10991-11010 MsG0080048874.01.T01:intron 40.0%
AGTTCCCTTTCCCAATACAA+AGG - contig502end:15665-15684 MsG0080048874.01.T01:intergenic 40.0%
ATAGGATACTAGGGTCAACT+GGG - contig502end:12541-12560 MsG0080048874.01.T01:intergenic 40.0%
ATAGGGCAAATGGATCACAA+AGG + contig502end:13572-13591 MsG0080048874.01.T01:intron 40.0%
ATATAGCATCATTGTGGGAC+GGG + contig502end:16213-16232 MsG0080048874.01.T01:exon 40.0%
ATTATCTCAAGGAGCAGGTA+TGG - contig502end:14239-14258 MsG0080048874.01.T01:intergenic 40.0%
CAAACAAGCTTAAGCCTGTA+AGG - contig502end:13809-13828 MsG0080048874.01.T01:intergenic 40.0%
CAAGCAGAACAATCCTCAAT+CGG - contig502end:11292-11311 MsG0080048874.01.T01:intergenic 40.0%
CCCCTTTCATCTTTAATGCA+CGG - contig502end:12681-12700 MsG0080048874.01.T01:intergenic 40.0%
CCGTGCATTAAAGATGAAAG+GGG + contig502end:12678-12697 MsG0080048874.01.T01:CDS 40.0%
CCTCCCATTACAACTAACAA+TGG + contig502end:10104-10123 MsG0080048874.01.T01:exon 40.0%
CTCAACTCCTTTACATCAAG+CGG + contig502end:12602-12621 MsG0080048874.01.T01:CDS 40.0%
CTCTTCACTCTCATACTTCA+TGG + contig502end:14335-14354 MsG0080048874.01.T01:intron 40.0%
CTTATGCAGATATGCTGTGA+GGG + contig502end:11907-11926 MsG0080048874.01.T01:intron 40.0%
CTTCACAAAAGATGTGCAAG+AGG + contig502end:16274-16293 MsG0080048874.01.T01:exon 40.0%
GAAGCAAAATTGGACGTTAG+TGG + contig502end:15996-16015 MsG0080048874.01.T01:exon 40.0%
GAAGTGGTTGTACTATTAGC+CGG - contig502end:15203-15222 MsG0080048874.01.T01:intergenic 40.0%
GACCAATTTCAACCTGTACT+GGG + contig502end:16380-16399 MsG0080048874.01.T01:exon 40.0%
GAGAAGAATTCAGTACGCAT+GGG + contig502end:10537-10556 MsG0080048874.01.T01:intron 40.0%
GATATAGCATCATTGTGGGA+CGG + contig502end:16212-16231 MsG0080048874.01.T01:exon 40.0%
GGACAATCTCAACCAAAAAG+TGG + contig502end:14534-14553 MsG0080048874.01.T01:CDS 40.0%
GGCACAAGTTTCCTTTGTAT+TGG + contig502end:15651-15670 MsG0080048874.01.T01:intron 40.0%
GTACTGAATTCTTCTCGTGT+CGG - contig502end:10533-10552 MsG0080048874.01.T01:intergenic 40.0%
GTCTGCTTCATAGGATACTA+GGG - contig502end:12550-12569 MsG0080048874.01.T01:intergenic 40.0%
GTTATGGAACTCTTGGAACA+GGG + contig502end:12648-12667 MsG0080048874.01.T01:CDS 40.0%
GTTGGCAAGAGAGGATTTAT+TGG + contig502end:10066-10085 MsG0080048874.01.T01:exon 40.0%
TAAACGGTGGAAGGAATGAA+TGG + contig502end:15499-15518 MsG0080048874.01.T01:intron 40.0%
TAAGCTAGAACCCGAAACAA+CGG - contig502end:10271-10290 MsG0080048874.01.T01:intergenic 40.0%
TACTGCATATCTCTCGGATT+CGG - contig502end:15723-15742 MsG0080048874.01.T01:intergenic 40.0%
TAGGGCAAATGGATCACAAA+GGG + contig502end:13573-13592 MsG0080048874.01.T01:intron 40.0%
TAGGTGAAACTGACAATTGC+TGG + contig502end:10990-11009 MsG0080048874.01.T01:intron 40.0%
TATTCGTCTGTCTTCAGACA+GGG + contig502end:11159-11178 MsG0080048874.01.T01:CDS 40.0%
TCTTATGCAGATATGCTGTG+AGG + contig502end:11906-11925 MsG0080048874.01.T01:intron 40.0%
TGAAAGGCTATTAGCTGAAG+TGG - contig502end:15219-15238 MsG0080048874.01.T01:intergenic 40.0%
TGACAAGAGTCGAAGAAGTT+TGG - contig502end:10180-10199 MsG0080048874.01.T01:intergenic 40.0%
TGCGAAGGATATGGAAATTG+AGG + contig502end:16631-16650 MsG0080048874.01.T01:exon 40.0%
TGCTGGGAAAAATACTGTGA+AGG + contig502end:11007-11026 MsG0080048874.01.T01:CDS 40.0%
TGTTGTGCAATGATGTTCAG+AGG + contig502end:11231-11250 MsG0080048874.01.T01:CDS 40.0%
TTCAAAGGTTGTGCAGCAAT+AGG - contig502end:16098-16117 MsG0080048874.01.T01:intergenic 40.0%
TTCAGCTAATAGCCTTTCAG+AGG + contig502end:15220-15239 MsG0080048874.01.T01:CDS 40.0%
TTCATGCATGCATGTTCACA+AGG + contig502end:15349-15368 MsG0080048874.01.T01:intron 40.0%
TTCTTCCTTCACCTAGGAAA+AGG + contig502end:16150-16169 MsG0080048874.01.T01:exon 40.0%
TTGACGTGACAATCCATCAT+TGG + contig502end:10695-10714 MsG0080048874.01.T01:intron 40.0%
TTTACGCATGCATCCAATGA+TGG - contig502end:10711-10730 MsG0080048874.01.T01:intergenic 40.0%
! AAATAACAAGGCGTTTGAGG+AGG + contig502end:16559-16578 MsG0080048874.01.T01:exon 40.0%
! ACAATCTGGTGATGCTGTAA+AGG + contig502end:12626-12645 MsG0080048874.01.T01:CDS 40.0%
! ACATAAAGTAGTGGGACTCA+TGG + contig502end:17142-17161 MsG0080048874.01.T01:exon 40.0%
! AGGGAACTTGCTTATCTCAA+AGG + contig502end:15677-15696 MsG0080048874.01.T01:intron 40.0%
! ATTCAAAACGCCGTTGTTTC+GGG + contig502end:10258-10277 MsG0080048874.01.T01:CDS 40.0%
! CATTTCATTTTCAGCATCCG+TGG + contig502end:13941-13960 MsG0080048874.01.T01:intron 40.0%
! CCATTGTTAGTTGTAATGGG+AGG - contig502end:10107-10126 MsG0080048874.01.T01:intergenic 40.0%
! CTTGCCAACCCGTTTAAAAT+TGG - contig502end:10055-10074 MsG0080048874.01.T01:intergenic 40.0%
! GAAAGTGTAGATACGCTCAA+GGG + contig502end:16599-16618 MsG0080048874.01.T01:exon 40.0%
! GCTCAATGTCACACTTTTCT+CGG - contig502end:17265-17284 MsG0080048874.01.T01:intergenic 40.0%
! GTAAAGGAGTTGAGTCTTGT+TGG - contig502end:12596-12615 MsG0080048874.01.T01:intergenic 40.0%
! GTTGGTCTCACATAAAGTAG+TGG + contig502end:17133-17152 MsG0080048874.01.T01:exon 40.0%
! TGGTGATGCTGTAAAGGTTA+TGG + contig502end:12632-12651 MsG0080048874.01.T01:CDS 40.0%
! TGGTTGCATTTAGTTCGTCT+CGG - contig502end:16421-16440 MsG0080048874.01.T01:intergenic 40.0%
! TGTGAAGGAAGAGGATTTTG+AGG + contig502end:11022-11041 MsG0080048874.01.T01:CDS 40.0%
! TTCTCTAGTCTTCGCCAAAT+AGG - contig502end:15943-15962 MsG0080048874.01.T01:intergenic 40.0%
! TTTGCTGGTTGTGTCTTTGA+TGG + contig502end:11326-11345 MsG0080048874.01.T01:CDS 40.0%
!! GACGCTGCATTTTGTTATCA+AGG + contig502end:16853-16872 MsG0080048874.01.T01:exon 40.0%
!! GAGAATTCGACACCACTTTT+TGG - contig502end:14549-14568 MsG0080048874.01.T01:intergenic 40.0%
!! GCTGCATTTTGTTATCAAGG+TGG + contig502end:16856-16875 MsG0080048874.01.T01:exon 40.0%
!! GGACATCACGTTTGTTTTCT+AGG + contig502end:13231-13250 MsG0080048874.01.T01:intron 40.0%
!! GGCCATTTTACTTCCTATCT+GGG + contig502end:13488-13507 MsG0080048874.01.T01:intron 40.0%
!! GTCTGTTGGAAGTATTGTGT+TGG + contig502end:17536-17555 MsG0080048874.01.T01:exon 40.0%
!! TCCCTTTTAAGGGTCGTTTA+GGG - contig502end:13431-13450 MsG0080048874.01.T01:intergenic 40.0%
!! TGGCCATTTTACTTCCTATC+TGG + contig502end:13487-13506 MsG0080048874.01.T01:intron 40.0%
!! TTAGCTTTTTCCTCCAAACG+TGG - contig502end:10844-10863 MsG0080048874.01.T01:intergenic 40.0%
AAAAGGTGGGGGAAACTCAA+AGG + contig502end:16043-16062 MsG0080048874.01.T01:exon 45.0%
AAAGGGACGTTACTAAGTCG+CGG + contig502end:13444-13463 MsG0080048874.01.T01:intron 45.0%
AACCTTCGCTCTGCTTTACT+TGG + contig502end:16344-16363 MsG0080048874.01.T01:exon 45.0%
AAGAAGGAGAATGCGTGTGA+AGG + contig502end:13616-13635 MsG0080048874.01.T01:intron 45.0%
AAGCAACCCCGAAAACATTG+TGG - contig502end:14037-14056 MsG0080048874.01.T01:intergenic 45.0%
AAGCTCAAGAGAAAAGGTGG+GGG + contig502end:16032-16051 MsG0080048874.01.T01:exon 45.0%
AATAACATAGCGGCTGCATG+CGG + contig502end:16116-16135 MsG0080048874.01.T01:exon 45.0%
AATCTGTGACTGTTGAGCCA+AGG + contig502end:11258-11277 MsG0080048874.01.T01:CDS 45.0%
ACCTTCGCTCTGCTTTACTT+GGG + contig502end:16345-16364 MsG0080048874.01.T01:exon 45.0%
AGAAGGAGAATGCGTGTGAA+GGG + contig502end:13617-13636 MsG0080048874.01.T01:intron 45.0%
AGCAGAAGAAAAGAAGGCTC+AGG + contig502end:13173-13192 MsG0080048874.01.T01:CDS 45.0%
AGCATCCGTGGTTACAGTAT+TGG + contig502end:13953-13972 MsG0080048874.01.T01:intron 45.0%
AGCTGCTACAGAGAGAAGAA+TGG + contig502end:15163-15182 MsG0080048874.01.T01:CDS 45.0%
AGGATTGTTCTGCTTGCATC+CGG + contig502end:11296-11315 MsG0080048874.01.T01:CDS 45.0%
ATCCGCAAGCTCAAGAGAAA+AGG + contig502end:16026-16045 MsG0080048874.01.T01:exon 45.0%
ATCCTATGAAGCAGACGAGA+AGG + contig502end:12554-12573 MsG0080048874.01.T01:CDS 45.0%
ATCTGTGACTGTTGAGCCAA+GGG + contig502end:11259-11278 MsG0080048874.01.T01:CDS 45.0%
ATGTTGCTATGATTGTCCGC+AGG + contig502end:12484-12503 MsG0080048874.01.T01:CDS 45.0%
ATGTTGGAGGTCTAGTCTGT+TGG + contig502end:17522-17541 MsG0080048874.01.T01:exon 45.0%
ATTGCTCCAACATCTGCTAC+AGG + contig502end:14513-14532 MsG0080048874.01.T01:CDS 45.0%
CAAGAGTCGAAGAAGTTTGG+TGG - contig502end:10177-10196 MsG0080048874.01.T01:intergenic 45.0%
CAAGCTCAAGAGAAAAGGTG+GGG + contig502end:16031-16050 MsG0080048874.01.T01:exon 45.0%
CACAAGGAGATCCTAGAAGA+TGG + contig502end:15365-15384 MsG0080048874.01.T01:intron 45.0%
CACATGACATTGTTCCTGCA+TGG + contig502end:15590-15609 MsG0080048874.01.T01:intron 45.0%
CAGTGAATGTGGTTTAGTCG+GGG + contig502end:15244-15263 MsG0080048874.01.T01:CDS 45.0%
CATAGGATACTAGGGTCAAC+TGG - contig502end:12542-12561 MsG0080048874.01.T01:intergenic 45.0%
CCAGTGAATGTGGTTTAGTC+GGG + contig502end:15243-15262 MsG0080048874.01.T01:CDS 45.0%
CGAGAAGAATTCAGTACGCA+TGG + contig502end:10536-10555 MsG0080048874.01.T01:intron 45.0%
CGGTACAAGAAAAACCATGC+AGG - contig502end:15607-15626 MsG0080048874.01.T01:intergenic 45.0%
CGTCTGCTTCATAGGATACT+AGG - contig502end:12551-12570 MsG0080048874.01.T01:intergenic 45.0%
CTATTCGTCTGTCTTCAGAC+AGG + contig502end:11158-11177 MsG0080048874.01.T01:CDS 45.0%
GACTAGACCTCCAACATAAC+AGG - contig502end:17519-17538 MsG0080048874.01.T01:intergenic 45.0%
GATTGTCCTGTAGCAGATGT+TGG - contig502end:14522-14541 MsG0080048874.01.T01:intergenic 45.0%
GCAAGCTCAAGAGAAAAGGT+GGG + contig502end:16030-16049 MsG0080048874.01.T01:exon 45.0%
GCAATCCACAACGAAGGATA+TGG + contig502end:16685-16704 MsG0080048874.01.T01:exon 45.0%
GCAATCCGCAGAAAAGGATA+TGG + contig502end:16810-16829 MsG0080048874.01.T01:exon 45.0%
GCAGCCGCTATGTTATTCAA+AGG - contig502end:16113-16132 MsG0080048874.01.T01:intergenic 45.0%
GCCAGTGAATGTGGTTTAGT+CGG + contig502end:15242-15261 MsG0080048874.01.T01:CDS 45.0%
GGACCAATTTCAACCTGTAC+TGG + contig502end:16379-16398 MsG0080048874.01.T01:exon 45.0%
GGCAGAACTATACATTCTGC+TGG + contig502end:11968-11987 MsG0080048874.01.T01:CDS 45.0%
GGTTATGGAACTCTTGGAAC+AGG + contig502end:12647-12666 MsG0080048874.01.T01:CDS 45.0%
GGTTCTGTGTCTGAAAGTGA+CGG - contig502end:16077-16096 MsG0080048874.01.T01:intergenic 45.0%
GTTCATGCACCACAAAAGGT+GGG - contig502end:14278-14297 MsG0080048874.01.T01:intergenic 45.0%
TCAAAGCAGCATGTCTTGTG+AGG - contig502end:13022-13041 MsG0080048874.01.T01:intergenic 45.0%
TGATATAGGTCATACCGCCT+TGG - contig502end:11763-11782 MsG0080048874.01.T01:intergenic 45.0%
TGATCAATGTGGTTTGAGGG+TGG - contig502end:10237-10256 MsG0080048874.01.T01:intergenic 45.0%
TGGCAGTAAAAGGGAGACTA+GGG + contig502end:12969-12988 MsG0080048874.01.T01:intron 45.0%
TGTTCATGCACCACAAAAGG+TGG - contig502end:14279-14298 MsG0080048874.01.T01:intergenic 45.0%
TTACATCAAGCGGCACAATC+TGG + contig502end:12612-12631 MsG0080048874.01.T01:CDS 45.0%
TTCCTTCTCGTCTGCTTCAT+AGG - contig502end:12559-12578 MsG0080048874.01.T01:intergenic 45.0%
TTCGTGAACTGCTTACTGCT+TGG + contig502end:12349-12368 MsG0080048874.01.T01:CDS 45.0%
TTGCTTTCATGTCCCAGTAC+AGG - contig502end:16395-16414 MsG0080048874.01.T01:intergenic 45.0%
TTGGCAGTAAAAGGGAGACT+AGG + contig502end:12968-12987 MsG0080048874.01.T01:intron 45.0%
! AGTCGTCAGCTGCTTTATGA+TGG + contig502end:12423-12442 MsG0080048874.01.T01:CDS 45.0%
! CACCTTTTCTCTTGAGCTTG+CGG - contig502end:16031-16050 MsG0080048874.01.T01:intergenic 45.0%
! GCTTTTCTTCCCACCTTTTG+TGG + contig502end:14266-14285 MsG0080048874.01.T01:intron 45.0%
! GGAAAGTGTAGATACGCTCA+AGG + contig502end:16598-16617 MsG0080048874.01.T01:exon 45.0%
! GGAGGAAATAAAAAGGGCAC+AGG + contig502end:15118-15137 MsG0080048874.01.T01:intron 45.0%
! GTCCCAGTACAGGTTGAAAT+TGG - contig502end:16385-16404 MsG0080048874.01.T01:intergenic 45.0%
! TGGCCGTCCTCATTTAAAAC+AGG - contig502end:10910-10929 MsG0080048874.01.T01:intergenic 45.0%
! TGGTGTCGAATTCTCGAAAG+AGG + contig502end:14554-14573 MsG0080048874.01.T01:CDS 45.0%
! TTAGTTGTAATGGGAGGGGA+GGG - contig502end:10101-10120 MsG0080048874.01.T01:intergenic 45.0%
!! AGGAAGAGGATTTTGAGGAC+CGG + contig502end:11027-11046 MsG0080048874.01.T01:CDS 45.0%
!! AGTTCTGCCAGAAGCATCTA+TGG - contig502end:11957-11976 MsG0080048874.01.T01:intergenic 45.0%
!! GATTGTGCCGCTTGATGTAA+AGG - contig502end:12612-12631 MsG0080048874.01.T01:intergenic 45.0%
!! GTCCCTTTTAAGGGTCGTTT+AGG - contig502end:13432-13451 MsG0080048874.01.T01:intergenic 45.0%
!! TCATGGCTTTGGTTTGAACC+TGG + contig502end:14352-14371 MsG0080048874.01.T01:intron 45.0%
!! TGGTGCTGCTGAAGCAAAAT+TGG + contig502end:15986-16005 MsG0080048874.01.T01:exon 45.0%
!! TGTTGCTCTAGCTCTTCTCT+CGG - contig502end:13133-13152 MsG0080048874.01.T01:intergenic 45.0%
!! TTTAAACGGGTTGGCAAGAG+AGG + contig502end:10057-10076 MsG0080048874.01.T01:exon 45.0%
!!! GCTTTTTTTCCTGCCTGTAC+AGG - contig502end:13111-13130 MsG0080048874.01.T01:intergenic 45.0%
!!! TGACTGTTTTTTTCCGGCCT+TGG - contig502end:11933-11952 MsG0080048874.01.T01:intergenic 45.0%
ACAGACTGCTCTGACTCAGT+TGG + contig502end:16523-16542 MsG0080048874.01.T01:exon 50.0%
AGATACGCTCAAGGGGCAAT+CGG + contig502end:16607-16626 MsG0080048874.01.T01:exon 50.0%
AGCAGCTGACGACTACTCAA+AGG - contig502end:12417-12436 MsG0080048874.01.T01:intergenic 50.0%
AGGTGGTTCTTCCTTCACCT+AGG + contig502end:16144-16163 MsG0080048874.01.T01:exon 50.0%
AGTTGTCGATCACCGGATAG+TGG - contig502end:14068-14087 MsG0080048874.01.T01:intergenic 50.0%
CAAGGGATAACACCCGATTG+AGG + contig502end:11276-11295 MsG0080048874.01.T01:CDS 50.0%
CAAGGTGCAATCCACAACGA+AGG + contig502end:16679-16698 MsG0080048874.01.T01:exon 50.0%
CAGGGCAAAGAGTTTCTGTC+TGG + contig502end:11177-11196 MsG0080048874.01.T01:CDS 50.0%
CAGTCAGCCATAGATGCTTC+TGG + contig502end:11947-11966 MsG0080048874.01.T01:CDS 50.0%
CCCGACTAAACCACATTCAC+TGG - contig502end:15246-15265 MsG0080048874.01.T01:intergenic 50.0%
CCTTGGAACACAAAACCTGG+GGG - contig502end:11746-11765 MsG0080048874.01.T01:intergenic 50.0%
CGCAAGCTCAAGAGAAAAGG+TGG + contig502end:16029-16048 MsG0080048874.01.T01:exon 50.0%
CGCCTTGGAACACAAAACCT+GGG - contig502end:11748-11767 MsG0080048874.01.T01:intergenic 50.0%
CTTTCAGAGGCCAGTGAATG+TGG + contig502end:15233-15252 MsG0080048874.01.T01:CDS 50.0%
GCAATCCGCAGTGAAGGATA+TGG + contig502end:16748-16767 MsG0080048874.01.T01:exon 50.0%
GCCTCCGACAAATCAAACGA+CGG - contig502end:16919-16938 MsG0080048874.01.T01:intergenic 50.0%
GCCTTGGAACACAAAACCTG+GGG - contig502end:11747-11766 MsG0080048874.01.T01:intergenic 50.0%
GCTATGAAGTCCGTGGTTGA+TGG + contig502end:16943-16962 MsG0080048874.01.T01:exon 50.0%
TCAAGGGCAATCCGCAGAAA+AGG + contig502end:16804-16823 MsG0080048874.01.T01:exon 50.0%
TCCCAAGTAAAGCAGAGCGA+AGG - contig502end:16349-16368 MsG0080048874.01.T01:intergenic 50.0%
TCGCTCTGCTTTACTTGGGA+AGG + contig502end:16349-16368 MsG0080048874.01.T01:exon 50.0%
TGCAAGAGGTGAAGGAGTCT+GGG + contig502end:16288-16307 MsG0080048874.01.T01:exon 50.0%
TGCCAGCTGCCAACATGTAT+GGG - contig502end:12710-12729 MsG0080048874.01.T01:intergenic 50.0%
TGTGGTTTGAGGGTGGTTGA+AGG - contig502end:10230-10249 MsG0080048874.01.T01:intergenic 50.0%
TTGCCAGCTGCCAACATGTA+TGG - contig502end:12711-12730 MsG0080048874.01.T01:intergenic 50.0%
! CACATTCACTGGCCTCTGAA+AGG - contig502end:15235-15254 MsG0080048874.01.T01:intergenic 50.0%
! CGTTTTGCTTCCCTGAGAGT+AGG - contig502end:12510-12529 MsG0080048874.01.T01:intergenic 50.0%
! CTCAATCGGGTGTTATCCCT+TGG - contig502end:11278-11297 MsG0080048874.01.T01:intergenic 50.0%
! GGAGAAGTCTTGTGTCCCAA+TGG + contig502end:16181-16200 MsG0080048874.01.T01:exon 50.0%
! GTTAGTTGTAATGGGAGGGG+AGG - contig502end:10102-10121 MsG0080048874.01.T01:intergenic 50.0%
! TAACAAGGCGTTTGAGGAGG+AGG + contig502end:16562-16581 MsG0080048874.01.T01:exon 50.0%
! TAGTTGTAATGGGAGGGGAG+GGG - contig502end:10100-10119 MsG0080048874.01.T01:intergenic 50.0%
! TCTTTTTCTTTCCTGCCCCC+AGG + contig502end:11728-11747 MsG0080048874.01.T01:intron 50.0%
!! CCAGGTTTTGTGTTCCAAGG+CGG + contig502end:11746-11765 MsG0080048874.01.T01:intron 50.0%
!! GGTCGATGTTGTGGCTTTAG+TGG + contig502end:13343-13362 MsG0080048874.01.T01:intron 50.0%
!! TCCGTCGTTTGATTTGTCGG+AGG + contig502end:16915-16934 MsG0080048874.01.T01:exon 50.0%
ACCACTTTCACAGCAGCCTG+TGG + contig502end:13293-13312 MsG0080048874.01.T01:intron 55.0%
ACCCCATACATGTTGGCAGC+TGG + contig502end:12705-12724 MsG0080048874.01.T01:CDS 55.0%
AGAGGTGAAGGAGTCTGGGT+TGG + contig502end:16292-16311 MsG0080048874.01.T01:exon 55.0%
AGGCTTTCGAAGCGAGGAGA+AGG - contig502end:10210-10229 MsG0080048874.01.T01:intergenic 55.0%
AGGTGGGGGAAACTCAAAGG+AGG + contig502end:16046-16065 MsG0080048874.01.T01:exon 55.0%
CAGATATGCTGTGAGGGCCA+AGG + contig502end:11913-11932 MsG0080048874.01.T01:intron 55.0%
CCGCCTTGGAACACAAAACC+TGG - contig502end:11749-11768 MsG0080048874.01.T01:intergenic 55.0%
CCTGCCTGTACAGGCACAAA+AGG - contig502end:13102-13121 MsG0080048874.01.T01:intergenic 55.0%
GACGTTACTAAGTCGCGGAG+GGG + contig502end:13449-13468 MsG0080048874.01.T01:intron 55.0%
GCAATCGGCTGCGAAGGATA+TGG + contig502end:16622-16641 MsG0080048874.01.T01:exon 55.0%
GCCAGCTGCCAACATGTATG+GGG - contig502end:12709-12728 MsG0080048874.01.T01:intergenic 55.0%
GCCTGTACAGGCACAAAAGG+AGG - contig502end:13099-13118 MsG0080048874.01.T01:intergenic 55.0%
GCGTTTGAGGAGGAGGTTGT+TGG + contig502end:16569-16588 MsG0080048874.01.T01:exon 55.0%
GGAACTCTTGGAACAGGGCT+TGG + contig502end:12653-12672 MsG0080048874.01.T01:CDS 55.0%
GGACGTTACTAAGTCGCGGA+GGG + contig502end:13448-13467 MsG0080048874.01.T01:intron 55.0%
GGCATCACAGGTCGATGTTG+TGG + contig502end:13334-13353 MsG0080048874.01.T01:intron 55.0%
GGCTTTCGAAGCGAGGAGAA+GGG - contig502end:10209-10228 MsG0080048874.01.T01:intergenic 55.0%
GGGTCGAACCCCATACATGT+TGG + contig502end:12698-12717 MsG0080048874.01.T01:CDS 55.0%
GGTGGGGGAAACTCAAAGGA+GGG + contig502end:16047-16066 MsG0080048874.01.T01:exon 55.0%
GGTTGAAGGCTTTCGAAGCG+AGG - contig502end:10216-10235 MsG0080048874.01.T01:intergenic 55.0%
GTGCAAGAGGTGAAGGAGTC+TGG + contig502end:16287-16306 MsG0080048874.01.T01:exon 55.0%
GTGGGGGAAACTCAAAGGAG+GGG + contig502end:16048-16067 MsG0080048874.01.T01:exon 55.0%
TAATGGGAGGGGAGGGGATT+AGG - contig502end:10094-10113 MsG0080048874.01.T01:intergenic 55.0%
TAGCATCATTGTGGGACGGG+AGG + contig502end:16216-16235 MsG0080048874.01.T01:exon 55.0%
TCGACCTGTGATGCCACAAC+CGG - contig502end:13329-13348 MsG0080048874.01.T01:intergenic 55.0%
TTACTAAGTCGCGGAGGGGA+GGG + contig502end:13453-13472 MsG0080048874.01.T01:intron 55.0%
TTGCACAGGAAACAGGCAGC+AGG - contig502end:13529-13548 MsG0080048874.01.T01:intergenic 55.0%
TTGTGGGACGGGAGGTTTGA+TGG + contig502end:16224-16243 MsG0080048874.01.T01:exon 55.0%
TTGTTCTGCTTGCATCCGGC+AGG + contig502end:11300-11319 MsG0080048874.01.T01:CDS 55.0%
! ACAACCAGCAAAGTGCCTGC+CGG - contig502end:11318-11337 MsG0080048874.01.T01:intergenic 55.0%
! CCTTTTGTGCCTGTACAGGC+AGG + contig502end:13099-13118 MsG0080048874.01.T01:intron 55.0%
! GCCTCCTTTTGTGCCTGTAC+AGG + contig502end:13095-13114 MsG0080048874.01.T01:intron 55.0%
!! CCCCCAGGTTTTGTGTTCCA+AGG + contig502end:11743-11762 MsG0080048874.01.T01:intron 55.0%
!! GGAGGAGGTTGTTGGCTTGA+AGG + contig502end:16577-16596 MsG0080048874.01.T01:exon 55.0%
AACCGGCTGATAGTCGCCAC+AGG - contig502end:13312-13331 MsG0080048874.01.T01:intergenic 60.0%
AGCCTGTGGCGACTATCAGC+CGG + contig502end:13307-13326 MsG0080048874.01.T01:intron 60.0%
AGCGGCTGCATGCGGTTCTA+AGG + contig502end:16124-16143 MsG0080048874.01.T01:exon 60.0%
CAAGGGGCAATCCGCAGTGA+AGG + contig502end:16742-16761 MsG0080048874.01.T01:exon 60.0%
CTTCCCTGAGAGTAGGCCTG+CGG - contig502end:12503-12522 MsG0080048874.01.T01:intergenic 60.0%
GAAACAGGCAGCAGGTTGCC+AGG - contig502end:13521-13540 MsG0080048874.01.T01:intergenic 60.0%
GCCACAGGCTGCTGTGAAAG+TGG - contig502end:13297-13316 MsG0080048874.01.T01:intergenic 60.0%
GGAACACAAAACCTGGGGGC+AGG - contig502end:11742-11761 MsG0080048874.01.T01:intergenic 60.0%
GGCTGACGCTATGAAGTCCG+TGG + contig502end:16936-16955 MsG0080048874.01.T01:exon 60.0%
GGGACGTTACTAAGTCGCGG+AGG + contig502end:13447-13466 MsG0080048874.01.T01:intron 60.0%
GTTACTAAGTCGCGGAGGGG+AGG + contig502end:13452-13471 MsG0080048874.01.T01:intron 60.0%
TACTAAGTCGCGGAGGGGAG+GGG + contig502end:13454-13473 MsG0080048874.01.T01:intron 60.0%
TAGCCCTGTAGCGCTGCCAT+TGG - contig502end:13396-13415 MsG0080048874.01.T01:intergenic 60.0%
TATGCTGTGAGGGCCAAGGC+CGG + contig502end:11917-11936 MsG0080048874.01.T01:CDS 60.0%
TCAGCCGGTTGTGGCATCAC+AGG + contig502end:13322-13341 MsG0080048874.01.T01:intron 60.0%
TCCTATCTGGGCTGAGCACC+TGG + contig502end:13500-13519 MsG0080048874.01.T01:intron 60.0%
TGGCCAATGGCAGCGCTACA+GGG + contig502end:13390-13409 MsG0080048874.01.T01:intron 60.0%
TGGCGACTATCAGCCGGTTG+TGG + contig502end:13313-13332 MsG0080048874.01.T01:intron 60.0%
TGTCCGCAGGCCTACTCTCA+GGG + contig502end:12497-12516 MsG0080048874.01.T01:CDS 60.0%
TTGTCCGCAGGCCTACTCTC+AGG + contig502end:12496-12515 MsG0080048874.01.T01:CDS 60.0%
! GCTTGCTACGCGCCACTATC+CGG + contig502end:14053-14072 MsG0080048874.01.T01:intron 60.0%
!! GGCTGCATGCGGTTCTAAGG+TGG + contig502end:16127-16146 MsG0080048874.01.T01:exon 60.0%
ACTAAGTCGCGGAGGGGAGG+GGG + contig502end:13455-13474 MsG0080048874.01.T01:intron 65.0%
CAAGGGGCAATCGGCTGCGA+AGG + contig502end:16616-16635 MsG0080048874.01.T01:exon 65.0%
GCATCCGGCAGGCACTTTGC+TGG + contig502end:11311-11330 MsG0080048874.01.T01:CDS 65.0%
GCCAGGTGCTCAGCCCAGAT+AGG - contig502end:13504-13523 MsG0080048874.01.T01:intergenic 65.0%
GTGGCCAATGGCAGCGCTAC+AGG + contig502end:13389-13408 MsG0080048874.01.T01:intron 65.0%
!! AGGGGAGGGGGGGTGGATTT+TGG + contig502end:13467-13486 MsG0080048874.01.T01:intron 65.0%
CTAAGTCGCGGAGGGGAGGG+GGG + contig502end:13456-13475 MsG0080048874.01.T01:intron 70.0%
TAAGTCGCGGAGGGGAGGGG+GGG + contig502end:13457-13476 MsG0080048874.01.T01:intron 70.0%
! GTCGCGGAGGGGAGGGGGGG+TGG + contig502end:13460-13479 MsG0080048874.01.T01:intron 85.0%
Chromosome Type Strat End Strand Name
contig502end gene 9996 17723 9996 ID=MsG0080048874.01;
contig502end mRNA 9996 17723 9996 ID=MsG0080048874.01.T01;Parent=MsG0080048874.01
contig502end exon 9996 10371 9996 ID=MsG0080048874.01.T01.exon;Parent=MsG0080048874.01.T01
contig502end CDS 10123 10371 10123 ID=MsG0080048874.01.T01.cds;Parent=MsG0080048874.01.T01
contig502end CDS 10993 11381 10993 ID=MsG0080048874.01.T01.cds;Parent=MsG0080048874.01.T01
contig502end exon 10993 11381 10993 ID=MsG0080048874.01.T01.exon;Parent=MsG0080048874.01.T01
contig502end CDS 11916 12030 11916 ID=MsG0080048874.01.T01.cds;Parent=MsG0080048874.01.T01
contig502end exon 11916 12030 11916 ID=MsG0080048874.01.T01.exon;Parent=MsG0080048874.01.T01
contig502end CDS 12345 12851 12345 ID=MsG0080048874.01.T01.cds;Parent=MsG0080048874.01.T01
contig502end exon 12345 12851 12345 ID=MsG0080048874.01.T01.exon;Parent=MsG0080048874.01.T01
contig502end CDS 13117 13194 13117 ID=MsG0080048874.01.T01.cds;Parent=MsG0080048874.01.T01
contig502end exon 13117 13194 13117 ID=MsG0080048874.01.T01.exon;Parent=MsG0080048874.01.T01
contig502end CDS 14489 14575 14489 ID=MsG0080048874.01.T01.cds;Parent=MsG0080048874.01.T01
contig502end exon 14489 14575 14489 ID=MsG0080048874.01.T01.exon;Parent=MsG0080048874.01.T01
contig502end CDS 15119 15305 15119 ID=MsG0080048874.01.T01.cds;Parent=MsG0080048874.01.T01
contig502end exon 15119 15305 15119 ID=MsG0080048874.01.T01.exon;Parent=MsG0080048874.01.T01
contig502end CDS 15904 16847 15904 ID=MsG0080048874.01.T01.cds;Parent=MsG0080048874.01.T01
contig502end exon 15904 17723 15904 ID=MsG0080048874.01.T01.exon;Parent=MsG0080048874.01.T01
Gene Sequence

>MsG0080048874.01.T01

ATGGCATTGTCATCATCTCAAGAAAAACTTCAACGTTCAATCTTTCAACTTCCACCAAACTTCTTCGACTCTTGTCATCTTCTCCCTTCTCCTCGCTTCGAAAGCCTTCAACCACCCTCAAACCACATTGATCATATTCAAAACGCCGTTGTTTCGGGTTCTAGCTTAACGTGCAATACATGTAAGGCTCAGTTTGATTCTTTTCAAGATCAACGTTCTCACCTCAAATCTGATATTCATCGATTCAATGTGAAACTGACAATTGCTGGGAAAAATACTGTGAAGGAAGAGGATTTTGAGGACCGGACATCTGATTTTGTCAAAGACTGTGATGTGTCAAGTATATCGGGATCAGAAAGTGACGTTAACAGTGAAAATGAGTCTGGTAAATCCGGTGAAAGCTTTAAACAAAAGCTATTCGTCTGTCTTCAGACAGGGCAAAGAGTTTCTGTCTGGAAGTGTTTGATTATGAACGTGAGCGAAAATGTGTTGTGCAATGATGTTCAGAGGTTGAAATCTGTGACTGTTGAGCCAAGGGATAACACCCGATTGAGGATTGTTCTGCTTGCATCCGGCAGGCACTTTGCTGGTTGTGTCTTTGATGGCGATACACTCGTAGCTCACAAGACATTTCATAGATATGCTGTGAGGGCCAAGGCCGGAAAAAAACAGTCAGCCATAGATGCTTCTGGCAGAACTATACATTCTGCTGGTGCTTCACTTCATCGTTACAACGAACCTGCATTTAAAAAGGAAGTTCGTGAACTGCTTACTGCTTGGAGACCTTATTTTGATGCTTCTATTTGCATTTTTATACACGCGCCTTTGAGTAGTCGTCAGCTGCTTTATGATGGAGAAAAGCCATGTTTTACCAATCCACAATGTGTTAGAAATGTTGCTATGATTGTCCGCAGGCCTACTCTCAGGGAAGCAAAACGTGTATATACCCAGTTGACCCTAGTATCCTATGAAGCAGACGAGAAGGAAATTTTACAGAGCAACCAACAAGACTCAACTCCTTTACATCAAGCGGCACAATCTGGTGATGCTGTAAAGGTTATGGAACTCTTGGAACAGGGCTTGGATCCGTGCATTAAAGATGAAAGGGGTCGAACCCCATACATGTTGGCAGCTGGCAAGAAAATCAAGAAAACTTTCAGAAGGTTTATGGCTTCAAATCTTGACAAATGGGATTGGAAAGCTGCAAAAGTGTTTTGTCCATTGACCAAAGAAATGGAAGAATCACAAGCTGCTATGAAGGCAGGAAAAAAAGCCGAGAGAAGAGCTAGAGCAACAGAATTAAAAGAAATACGTGAAGCAGAAGAAAAGAAGGCTCAGGCTGAAGCTGCTGAAAAACAAGCGATTGCTCCAACATCTGCTACAGGACAATCTCAACCAAAAAGTGGTGTCGAATTCTCGAAAGAGGAGGAAATAAAAAGGGCACAGGATGCAAAAAGAGAAAAGAGAGCAGCTGCTACAGAGAGAAGAATGGATGCCCTCAAAATTCCGGCTAATAGTACAACCACTTCAGCTAATAGCCTTTCAGAGGCCAGTGAATGTGGTTTAGTCGGGGATACAGCATCCTTTTCCTGTTGTAATTCATTACTTGCTGGAAGAATGTCTCCGCTAAATGAAGAGGAGTTCAAAACCTATTTGGCGAAGACTAGAGAAAAGAGAGACATAGTTTTGCAATTTGGTGCTGCTGAAGCAAAATTGGACGTTAGTGGTGTTACAATCCGCAAGCTCAAGAGAAAAGGTGGGGGAAACTCAAAGGAGGGGTCACCGTCACTTTCAGACACAGAACCTATTGCTGCACAACCTTTGAATAACATAGCGGCTGCATGCGGTTCTAAGGTGGTTCTTCCTTCACCTAGGAAAAGGATTAAGAAGGAGAAGTCTTGTGTCCCAATGGAAAAGACTGATATAGCATCATTGTGGGACGGGAGGTTTGATGGAATGAATTTTGTGGACAGAAATCTATGCTTCACAAAAGATGTGCAAGAGGTGAAGGAGTCTGGGTTGGAAAAAGCTAGTGAGATGCTTGTGGCGTACAACCTTCGCTCTGCTTTACTTGGGAAGGTGATTATGGACCAATTTCAACCTGTACTGGGACATGAAAGCAACTGCCGAGACGAACTAAATGCAACCAAAGAAAAATTGAAAATAGCCAATGATATTCTTGGAGATATGAAGAAACAAATATTGAAGGTAAATAAGAGATTGGAGGAAGAACAGACTGCTCTGACTCAGTTGGAGAAAAAGACTGAAAATAACAAGGCGTTTGAGGAGGAGGTTGTTGGCTTGAAGGAAAGTGTAGATACGCTCAAGGGGCAATCGGCTGCGAAGGATATGGAAATTGAGGATTTGAAGAAAAGCATAGATATGCTCAAGGTGCAATCCACAACGAAGGATATGGAAATTGAGGATTTGAAGAAAATTATGGATATGCTCAAGGGGCAATCCGCAGTGAAGGATATGGAAATTGAGGATTTGAAGAAAAGTATAGATACGCTCAAGGGCAATCCGCAGAAAAGGATATGGAAATTGAGGAGTTGA

Protein sequence

>MsG0080048874.01.T01

MALSSSQEKLQRSIFQLPPNFFDSCHLLPSPRFESLQPPSNHIDHIQNAVVSGSSLTCNTCKAQFDSFQDQRSHLKSDIHRFNVKLTIAGKNTVKEEDFEDRTSDFVKDCDVSSISGSESDVNSENESGKSGESFKQKLFVCLQTGQRVSVWKCLIMNVSENVLCNDVQRLKSVTVEPRDNTRLRIVLLASGRHFAGCVFDGDTLVAHKTFHRYAVRAKAGKKQSAIDASGRTIHSAGASLHRYNEPAFKKEVRELLTAWRPYFDASICIFIHAPLSSRQLLYDGEKPCFTNPQCVRNVAMIVRRPTLREAKRVYTQLTLVSYEADEKEILQSNQQDSTPLHQAAQSGDAVKVMELLEQGLDPCIKDERGRTPYMLAAGKKIKKTFRRFMASNLDKWDWKAAKVFCPLTKEMEESQAAMKAGKKAERRARATELKEIREAEEKKAQAEAAEKQAIAPTSATGQSQPKSGVEFSKEEEIKRAQDAKREKRAAATERRMDALKIPANSTTTSANSLSEASECGLVGDTASFSCCNSLLAGRMSPLNEEEFKTYLAKTREKRDIVLQFGAAEAKLDVSGVTIRKLKRKGGGNSKEGSPSLSDTEPIAAQPLNNIAAACGSKVVLPSPRKRIKKEKSCVPMEKTDIASLWDGRFDGMNFVDRNLCFTKDVQEVKESGLEKASEMLVAYNLRSALLGKVIMDQFQPVLGHESNCRDELNATKEKLKIANDILGDMKKQILKVNKRLEEEQTALTQLEKKTENNKAFEEEVVGLKESVDTLKGQSAAKDMEIEDLKKSIDMLKVQSTTKDMEIEDLKKIMDMLKGQSAVKDMEIEDLKKSIDTLKGNPQKRIWKLRS*