Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031156.01.T01 | XP_039685632.1 | 73.085 | 457 | 95 | 2 | 1 | 430 | 69 | 524 | 0 | 669 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031156.01.T01 | G7IFC8 | 91.743 | 218 | 18 | 0 | 1 | 218 | 69 | 286 | 3.70e-140 | 413 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180002518.01 | MsG0680031156.01 | 0.804884 | 1.743010e-49 | 9.092105e-47 |
| MsG0680031156.01 | MsG0680031210.01 | 0.804186 | 2.437531e-49 | 1.248660e-46 |
| MsG0680031156.01 | MsG0780036498.01 | 0.816391 | 5.666803e-52 | 4.010177e-49 |
| MsG0680031156.01 | MsG0780039282.01 | 0.809561 | 1.780725e-50 | 1.048952e-47 |
| MsG0680031156.01 | MsG0880044644.01 | 0.804124 | 2.511214e-49 | 1.284392e-46 |
| MsG0580024621.01 | MsG0680031156.01 | 0.837193 | 6.006241e-57 | 7.743247e-54 |
| MsG0380016475.01 | MsG0680031156.01 | 0.805796 | 1.123015e-49 | 5.996337e-47 |
| MsG0580026222.01 | MsG0680031156.01 | 0.811355 | 7.297103e-51 | 4.506818e-48 |
| MsG0580027332.01 | MsG0680031156.01 | 0.818271 | 2.138286e-52 | 1.593154e-49 |
| MsG0580027687.01 | MsG0680031156.01 | 0.836525 | 8.892172e-57 | 1.123478e-53 |
| MsG0580027688.01 | MsG0680031156.01 | 0.841859 | 3.679379e-58 | 5.477965e-55 |
| MsG0280009248.01 | MsG0680031156.01 | 0.813753 | 2.182195e-51 | 1.437254e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031156.01.T01 | MTR_7g024060 | 91.743 | 218 | 18 | 0 | 1 | 218 | 69 | 286 | 9.39e-144 | 413 |
| MsG0680031156.01.T01 | MTR_6g087820 | 91.743 | 218 | 18 | 0 | 1 | 218 | 69 | 286 | 9.39e-144 | 413 |
| MsG0680031156.01.T01 | MTR_5g081190 | 91.743 | 218 | 18 | 0 | 1 | 218 | 69 | 286 | 9.39e-144 | 413 |
| MsG0680031156.01.T01 | MTR_5g091480 | 91.743 | 218 | 18 | 0 | 1 | 218 | 69 | 286 | 9.39e-144 | 413 |
| MsG0680031156.01.T01 | MTR_5g056290 | 91.743 | 218 | 18 | 0 | 1 | 218 | 69 | 286 | 9.39e-144 | 413 |
| MsG0680031156.01.T01 | MTR_3g031190 | 91.743 | 218 | 18 | 0 | 1 | 218 | 69 | 286 | 9.39e-144 | 413 |
| MsG0680031156.01.T01 | MTR_2g005490 | 91.743 | 218 | 18 | 0 | 1 | 218 | 69 | 286 | 9.39e-144 | 413 |
| MsG0680031156.01.T01 | MTR_2g010570 | 91.743 | 218 | 18 | 0 | 1 | 218 | 69 | 286 | 9.39e-144 | 413 |
| MsG0680031156.01.T01 | MTR_5g030110 | 91.743 | 218 | 18 | 0 | 1 | 218 | 69 | 286 | 1.23e-143 | 412 |
| MsG0680031156.01.T01 | MTR_2g007410 | 91.743 | 218 | 18 | 0 | 1 | 218 | 69 | 286 | 1.23e-143 | 412 |
| MsG0680031156.01.T01 | MTR_8g446640 | 91.743 | 218 | 18 | 0 | 1 | 218 | 50 | 267 | 1.70e-143 | 411 |
| MsG0680031156.01.T01 | MTR_7g074180 | 89.450 | 218 | 23 | 0 | 1 | 218 | 69 | 286 | 2.86e-141 | 407 |
| MsG0680031156.01.T01 | MTR_2g010270 | 87.225 | 227 | 20 | 1 | 1 | 218 | 50 | 276 | 6.31e-141 | 405 |
| MsG0680031156.01.T01 | MTR_7g451880 | 89.908 | 218 | 22 | 0 | 1 | 218 | 70 | 287 | 3.92e-140 | 404 |
| MsG0680031156.01.T01 | MTR_4g058660 | 89.450 | 218 | 23 | 0 | 1 | 218 | 69 | 286 | 4.81e-139 | 401 |
| MsG0680031156.01.T01 | MTR_1g011490 | 86.697 | 218 | 20 | 1 | 1 | 218 | 69 | 277 | 4.28e-132 | 383 |
| MsG0680031156.01.T01 | MTR_1g023370 | 83.486 | 218 | 17 | 1 | 1 | 218 | 69 | 267 | 4.26e-126 | 367 |
| MsG0680031156.01.T01 | MTR_5g045850 | 82.110 | 218 | 21 | 2 | 1 | 218 | 54 | 253 | 5.70e-121 | 353 |
| MsG0680031156.01.T01 | MTR_3g015660 | 91.908 | 173 | 14 | 0 | 1 | 173 | 69 | 241 | 8.52e-114 | 333 |
| MsG0680031156.01.T01 | MTR_8g005940 | 77.064 | 218 | 17 | 1 | 1 | 218 | 69 | 253 | 4.30e-112 | 331 |
| MsG0680031156.01.T01 | MTR_1g105785 | 38.013 | 463 | 249 | 4 | 2 | 428 | 70 | 530 | 7.00e-110 | 335 |
| MsG0680031156.01.T01 | MTR_1g082860 | 86.061 | 165 | 14 | 1 | 1 | 165 | 69 | 224 | 1.33e-97 | 293 |
| MsG0680031156.01.T01 | MTR_5g012180 | 70.183 | 218 | 18 | 3 | 1 | 218 | 54 | 224 | 5.82e-96 | 289 |
| MsG0680031156.01.T01 | MTR_7g110100 | 35.165 | 455 | 263 | 2 | 1 | 423 | 69 | 523 | 2.10e-95 | 296 |
| MsG0680031156.01.T01 | MTR_0105s0080 | 89.437 | 142 | 15 | 0 | 28 | 169 | 52 | 193 | 3.43e-87 | 266 |
| MsG0680031156.01.T01 | MTR_3g036220 | 64.220 | 218 | 17 | 2 | 1 | 218 | 54 | 210 | 4.21e-84 | 258 |
| MsG0680031156.01.T01 | MTR_3g452170 | 33.411 | 428 | 234 | 2 | 1 | 423 | 69 | 450 | 7.02e-79 | 251 |
| MsG0680031156.01.T01 | MTR_7g051400 | 33.407 | 455 | 243 | 8 | 2 | 420 | 70 | 500 | 1.15e-78 | 253 |
| MsG0680031156.01.T01 | MTR_0048s0080 | 44.402 | 259 | 120 | 4 | 71 | 310 | 5 | 258 | 3.98e-68 | 220 |
| MsG0680031156.01.T01 | MTR_5g071020 | 55.505 | 218 | 15 | 3 | 1 | 218 | 54 | 189 | 1.84e-64 | 207 |
| MsG0680031156.01.T01 | MTR_3g449160 | 70.629 | 143 | 12 | 1 | 1 | 143 | 1 | 113 | 1.32e-62 | 198 |
| MsG0680031156.01.T01 | MTR_7g045450 | 49.268 | 205 | 89 | 1 | 1 | 205 | 69 | 258 | 1.73e-62 | 202 |
| MsG0680031156.01.T01 | MTR_6g073570 | 49.268 | 205 | 89 | 1 | 1 | 205 | 69 | 258 | 1.73e-62 | 202 |
| MsG0680031156.01.T01 | MTR_2g435900 | 71.329 | 143 | 11 | 1 | 1 | 143 | 1 | 113 | 2.92e-62 | 197 |
| MsG0680031156.01.T01 | MTR_1g052715 | 43.318 | 217 | 122 | 1 | 3 | 218 | 30 | 246 | 6.85e-60 | 198 |
| MsG0680031156.01.T01 | MTR_2g019040 | 68.889 | 135 | 34 | 1 | 84 | 218 | 4 | 130 | 1.35e-58 | 192 |
| MsG0680031156.01.T01 | MTR_5g019960 | 52.632 | 171 | 79 | 2 | 2 | 171 | 76 | 245 | 1.87e-58 | 192 |
| MsG0680031156.01.T01 | MTR_1g492690 | 30.864 | 324 | 183 | 7 | 126 | 427 | 8 | 312 | 1.26e-40 | 149 |
| MsG0680031156.01.T01 | MTR_3g007260 | 47.586 | 145 | 50 | 2 | 2 | 146 | 55 | 173 | 5.46e-39 | 139 |
| MsG0680031156.01.T01 | MTR_4g032565 | 31.183 | 279 | 136 | 6 | 197 | 423 | 9 | 283 | 4.12e-38 | 140 |
| MsG0680031156.01.T01 | MTR_1g110330 | 85.135 | 74 | 11 | 0 | 1 | 74 | 47 | 120 | 1.79e-37 | 135 |
| MsG0680031156.01.T01 | MTR_1g110330 | 67.123 | 73 | 5 | 1 | 146 | 218 | 117 | 170 | 4.69e-21 | 91.3 |
| MsG0680031156.01.T01 | MTR_4g032585 | 30.824 | 279 | 137 | 6 | 197 | 423 | 9 | 283 | 2.23e-37 | 137 |
| MsG0680031156.01.T01 | MTR_6g024030 | 55.340 | 103 | 46 | 0 | 72 | 174 | 60 | 162 | 3.62e-34 | 128 |
| MsG0680031156.01.T01 | MTR_4g060433 | 37.447 | 235 | 115 | 6 | 189 | 423 | 1 | 203 | 9.92e-34 | 125 |
| MsG0680031156.01.T01 | MTR_5g057125 | 29.206 | 315 | 182 | 6 | 136 | 426 | 1 | 298 | 3.36e-30 | 119 |
| MsG0680031156.01.T01 | MTR_7g039300 | 35.610 | 205 | 75 | 3 | 1 | 205 | 100 | 247 | 2.86e-29 | 115 |
| MsG0680031156.01.T01 | MTR_7g096440 | 34.483 | 145 | 95 | 0 | 2 | 146 | 23 | 167 | 1.00e-28 | 114 |
| MsG0680031156.01.T01 | MTR_3g068135 | 47.863 | 117 | 46 | 2 | 175 | 285 | 39 | 146 | 1.69e-26 | 106 |
| MsG0680031156.01.T01 | MTR_3g055660 | 23.820 | 466 | 304 | 14 | 1 | 426 | 94 | 548 | 4.88e-26 | 110 |
| MsG0680031156.01.T01 | MTR_1g115520 | 41.221 | 131 | 70 | 2 | 219 | 349 | 5 | 128 | 1.29e-25 | 102 |
| MsG0680031156.01.T01 | MTR_6g055250 | 30.827 | 266 | 161 | 9 | 1 | 252 | 26 | 282 | 2.58e-25 | 107 |
| MsG0680031156.01.T01 | MTR_4g014890 | 23.932 | 468 | 272 | 17 | 1 | 426 | 94 | 519 | 8.53e-25 | 107 |
| MsG0680031156.01.T01 | MTR_6g059860 | 23.441 | 465 | 304 | 14 | 1 | 426 | 88 | 539 | 9.16e-25 | 107 |
| MsG0680031156.01.T01 | MTR_1g075850 | 24.451 | 364 | 256 | 9 | 2 | 358 | 64 | 415 | 1.06e-24 | 106 |
| MsG0680031156.01.T01 | MTR_2g450060 | 24.928 | 345 | 216 | 11 | 1 | 306 | 69 | 409 | 6.38e-24 | 104 |
| MsG0680031156.01.T01 | MTR_1g043690 | 28.996 | 269 | 173 | 7 | 1 | 259 | 72 | 332 | 1.02e-23 | 104 |
| MsG0680031156.01.T01 | MTR_2g048560 | 22.532 | 395 | 270 | 8 | 2 | 362 | 70 | 462 | 1.62e-23 | 103 |
| MsG0680031156.01.T01 | MTR_8g062030 | 23.768 | 345 | 248 | 8 | 2 | 343 | 70 | 402 | 7.66e-23 | 101 |
| MsG0680031156.01.T01 | MTR_6g465570 | 45.631 | 103 | 56 | 0 | 2 | 104 | 66 | 168 | 8.02e-23 | 95.1 |
| MsG0680031156.01.T01 | MTR_8g465040 | 45.631 | 103 | 56 | 0 | 1 | 103 | 69 | 171 | 1.08e-22 | 94.7 |
| MsG0680031156.01.T01 | MTR_4g085760 | 27.376 | 263 | 174 | 6 | 7 | 257 | 78 | 335 | 2.46e-22 | 99.8 |
| MsG0680031156.01.T01 | MTR_3g056270 | 25.000 | 372 | 233 | 10 | 2 | 338 | 229 | 589 | 2.70e-22 | 100 |
| MsG0680031156.01.T01 | MTR_5g004860 | 26.966 | 267 | 181 | 7 | 1 | 257 | 65 | 327 | 7.44e-22 | 98.2 |
| MsG0680031156.01.T01 | MTR_4g036240 | 24.462 | 372 | 235 | 10 | 2 | 338 | 70 | 430 | 1.26e-21 | 97.8 |
| MsG0680031156.01.T01 | MTR_5g078250 | 23.562 | 365 | 244 | 10 | 2 | 336 | 70 | 429 | 1.40e-21 | 97.4 |
| MsG0680031156.01.T01 | MTR_8g104590 | 47.475 | 99 | 28 | 1 | 206 | 280 | 7 | 105 | 2.54e-21 | 91.7 |
| MsG0680031156.01.T01 | MTR_1g051235 | 44.231 | 104 | 57 | 1 | 1 | 103 | 69 | 172 | 1.07e-20 | 89.4 |
| MsG0680031156.01.T01 | MTR_7g070110 | 61.905 | 63 | 24 | 0 | 1 | 63 | 53 | 115 | 1.65e-20 | 87.4 |
| MsG0680031156.01.T01 | MTR_7g051840 | 37.255 | 102 | 61 | 1 | 2 | 103 | 27 | 125 | 5.97e-19 | 82.8 |
| MsG0680031156.01.T01 | MTR_3g046650 | 34.848 | 132 | 78 | 3 | 175 | 305 | 78 | 202 | 7.08e-19 | 85.9 |
| MsG0680031156.01.T01 | MTR_4g036240 | 23.955 | 359 | 227 | 10 | 15 | 338 | 3 | 350 | 1.45e-18 | 88.2 |
| MsG0680031156.01.T01 | MTR_6g464080 | 25.806 | 310 | 208 | 9 | 1 | 302 | 66 | 361 | 2.95e-18 | 87.4 |
| MsG0680031156.01.T01 | MTR_8g064300 | 27.368 | 190 | 85 | 3 | 263 | 423 | 143 | 308 | 2.76e-17 | 82.8 |
| MsG0680031156.01.T01 | MTR_0003s0290 | 25.882 | 255 | 177 | 6 | 12 | 257 | 44 | 295 | 5.90e-17 | 83.2 |
| MsG0680031156.01.T01 | MTR_5g093790 | 26.842 | 190 | 86 | 3 | 263 | 423 | 217 | 382 | 6.21e-16 | 79.3 |
| MsG0680031156.01.T01 | MTR_5g041170 | 27.477 | 222 | 143 | 7 | 50 | 257 | 17 | 234 | 6.57e-16 | 79.7 |
| MsG0680031156.01.T01 | MTR_5g053590 | 28.519 | 270 | 173 | 9 | 4 | 257 | 69 | 334 | 1.41e-15 | 79.0 |
| MsG0680031156.01.T01 | MTR_8g076570 | 23.223 | 422 | 273 | 14 | 2 | 385 | 67 | 475 | 3.59e-14 | 75.1 |
| MsG0680031156.01.T01 | MTR_2g008650 | 21.526 | 367 | 252 | 8 | 4 | 338 | 74 | 436 | 9.36e-14 | 73.6 |
| MsG0680031156.01.T01 | MTR_4g036240 | 24.232 | 293 | 177 | 9 | 80 | 338 | 6 | 287 | 4.88e-13 | 70.9 |
| MsG0680031156.01.T01 | MTR_4g011200 | 76.471 | 34 | 8 | 0 | 217 | 250 | 49 | 82 | 1.32e-12 | 65.1 |
| MsG0680031156.01.T01 | MTR_4g017450 | 44.776 | 67 | 37 | 0 | 1 | 67 | 68 | 134 | 1.26e-11 | 62.4 |
| MsG0680031156.01.T01 | MTR_3g103470 | 42.391 | 92 | 51 | 2 | 335 | 426 | 1 | 90 | 1.41e-11 | 60.8 |
| MsG0680031156.01.T01 | MTR_8g027910 | 28.889 | 180 | 120 | 4 | 2 | 175 | 76 | 253 | 1.87e-11 | 64.7 |
| MsG0680031156.01.T01 | MTR_6g045290 | 30.496 | 141 | 96 | 2 | 1 | 140 | 323 | 462 | 2.38e-11 | 65.9 |
| MsG0680031156.01.T01 | MTR_6g052340 | 27.273 | 176 | 121 | 5 | 4 | 174 | 68 | 241 | 7.01e-11 | 64.7 |
| MsG0680031156.01.T01 | MTR_1g094230 | 22.358 | 246 | 159 | 8 | 2 | 236 | 70 | 294 | 7.34e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031156.01.T01 | AT1G52950 | 24.409 | 254 | 178 | 6 | 20 | 262 | 87 | 337 | 1.43e-18 | 88.6 |
Find 84 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACTTGCATTGCTCTCTTT+GGG | 0.202399 | 6:+15238454 | MsG0680031156.01.T01:CDS |
| ACCACTTGCATTGCTCTCTT+TGG | 0.221388 | 6:+15238453 | MsG0680031156.01.T01:CDS |
| GGAGTTGTTAATGCCTTTAA+TGG | 0.227533 | 6:+15238675 | MsG0680031156.01.T01:CDS |
| TACATAATTTCAGATGTTAT+TGG | 0.263257 | 6:+15238242 | MsG0680031156.01.T01:intron |
| ATCATCAGATGCCTTCTTTA+CGG | 0.268383 | 6:-15239886 | None:intergenic |
| CGCTAGGTGACCCAGTTTAT+TGG | 0.282196 | 6:+15239617 | MsG0680031156.01.T01:intron |
| GCACATTACGCCCAATAAAC+TGG | 0.284869 | 6:-15239628 | None:intergenic |
| GGACCTCTTAGCACCTGTTT+TGG | 0.300072 | 6:-15240325 | None:intergenic |
| TGCAAGACACACATGTATTT+AGG | 0.306725 | 6:+15238554 | MsG0680031156.01.T01:CDS |
| CAGCTTGAAAATGCAATTGT+AGG | 0.306782 | 6:+15237949 | MsG0680031156.01.T01:CDS |
| TATCAGCTTAGTCCCATTAA+AGG | 0.310808 | 6:-15238688 | None:intergenic |
| ATCGGAACATTTGAATTGTT+TGG | 0.325847 | 6:-15240104 | None:intergenic |
| TAATTGAAAGAGGTGATATA+AGG | 0.328150 | 6:+15238270 | MsG0680031156.01.T01:CDS |
| GGGACTAAGCTGATACTTAA+TGG | 0.330761 | 6:+15238696 | MsG0680031156.01.T01:CDS |
| GGTTATTGATCTCACTTTAG+AGG | 0.347534 | 6:+15238322 | MsG0680031156.01.T01:CDS |
| GTCATGTATGCAGCGACTTC+AGG | 0.356900 | 6:-15238726 | None:intergenic |
| GCTAGGTGACCCAGTTTATT+GGG | 0.369425 | 6:+15239618 | MsG0680031156.01.T01:intron |
| CACTAAGTCAATGCTATTAG+AGG | 0.387162 | 6:-15240346 | None:intergenic |
| ATGCACCCAGTGTGCTTCAT+TGG | 0.403027 | 6:+15239392 | MsG0680031156.01.T01:CDS |
| GAGTTGTTAATGCCTTTAAT+GGG | 0.404228 | 6:+15238676 | MsG0680031156.01.T01:CDS |
| ACTGTATGTGAGATCGAAAC+TGG | 0.405872 | 6:+15239348 | MsG0680031156.01.T01:CDS |
| CGGAGCTGTTCGTTGAAATC+TGG | 0.408812 | 6:-15239134 | None:intergenic |
| GACACACCAACCACCAAAAC+AGG | 0.418702 | 6:+15240312 | MsG0680031156.01.T01:CDS |
| CTCTAATAGCATTGACTTAG+TGG | 0.430982 | 6:+15240347 | MsG0680031156.01.T01:CDS |
| TCATGCTTTCAATTGTCATT+CGG | 0.442768 | 6:-15239188 | None:intergenic |
| AACTGTCGAGGAAGTGTCTA+CGG | 0.454569 | 6:+15238113 | MsG0680031156.01.T01:CDS |
| TTGCATGAGTCCTCAGCCTC+TGG | 0.456529 | 6:-15240273 | None:intergenic |
| CACTTGCATTGCTCTCTTTG+GGG | 0.462664 | 6:+15238455 | MsG0680031156.01.T01:CDS |
| GAAATGTCGTAAAGAAGTAT+TGG | 0.483444 | 6:+15239856 | MsG0680031156.01.T01:CDS |
| AATTGAAAGAGGTGATATAA+GGG | 0.489125 | 6:+15238271 | MsG0680031156.01.T01:CDS |
| TTCAGGTCCATGGTTGAAGA+AGG | 0.489129 | 6:+15237916 | None:intergenic |
| AAAAGGATGGAAGGAAAAGC+AGG | 0.493666 | 6:+15238300 | MsG0680031156.01.T01:CDS |
| GCTTTCAATTGTCATTCGGT+TGG | 0.496345 | 6:-15239184 | None:intergenic |
| GATAGCAGGCGAGTGTACTT+TGG | 0.506539 | 6:-15238043 | None:intergenic |
| ATCAGCACATTAAAATCAGC+AGG | 0.507382 | 6:-15239795 | None:intergenic |
| CACATTACGCCCAATAAACT+GGG | 0.508234 | 6:-15239627 | None:intergenic |
| AACTGCAATATCAGTATAGT+AGG | 0.514233 | 6:-15238530 | None:intergenic |
| AGATCGAAACTGGGGTTGAT+TGG | 0.522728 | 6:+15239358 | MsG0680031156.01.T01:CDS |
| TTCAAGGTTGAGGTTGGTGA+AGG | 0.523411 | 6:+15239834 | MsG0680031156.01.T01:CDS |
| GTTGTTGAGCTTAGTGTGGA+TGG | 0.524110 | 6:+15240074 | MsG0680031156.01.T01:CDS |
| TGATATAAGGGAAACTGAAA+AGG | 0.524272 | 6:+15238283 | MsG0680031156.01.T01:CDS |
| TAGTAGGTGTGTGGTTGTCA+TGG | 0.526807 | 6:-15238514 | None:intergenic |
| ATAAGGGAAACTGAAAAGGA+TGG | 0.532230 | 6:+15238287 | MsG0680031156.01.T01:CDS |
| ATTGGTCATGTAATTGAAAG+AGG | 0.535259 | 6:+15238260 | MsG0680031156.01.T01:CDS |
| GAAGTCGCTGCATACATGAC+AGG | 0.539468 | 6:+15238729 | MsG0680031156.01.T01:CDS |
| AAAACGTTCATAGGGATAGC+AGG | 0.542724 | 6:-15238057 | None:intergenic |
| TTGGAATTATGCCGTAAAGA+AGG | 0.543424 | 6:+15239875 | MsG0680031156.01.T01:CDS |
| TTGACACGAACAACTCTGGT+AGG | 0.549701 | 6:-15240411 | None:intergenic |
| TCAACAACAGATCCATCGTC+GGG | 0.557450 | 6:-15240059 | None:intergenic |
| CTGTATGTGAGATCGAAACT+GGG | 0.565040 | 6:+15239349 | MsG0680031156.01.T01:CDS |
| TCAGGTCCATGGTTGAAGAA+GGG | 0.568101 | 6:+15237917 | None:intergenic |
| CCACCAAAACAGGTGCTAAG+AGG | 0.573345 | 6:+15240322 | MsG0680031156.01.T01:CDS |
| ACTGTCGAGGAAGTGTCTAC+GGG | 0.577481 | 6:+15238114 | MsG0680031156.01.T01:CDS |
| CAGGTCCATGGTTGAAGAAG+GGG | 0.577721 | 6:+15237918 | None:intergenic |
| GGGAAACTGAAAAGGATGGA+AGG | 0.581802 | 6:+15238291 | MsG0680031156.01.T01:CDS |
| GCAGGATGTACCAGAGGCTG+AGG | 0.587933 | 6:+15240263 | MsG0680031156.01.T01:intron |
| CTCAACAACAGATCCATCGT+CGG | 0.590122 | 6:-15240060 | None:intergenic |
| ATCTGTTGTTGAGCTTAGTG+TGG | 0.594833 | 6:+15240070 | MsG0680031156.01.T01:CDS |
| GTGCAAGACTTGATCAATGA+AGG | 0.596643 | 6:+15239647 | MsG0680031156.01.T01:CDS |
| TCTAATAGCATTGACTTAGT+GGG | 0.596680 | 6:+15240348 | MsG0680031156.01.T01:CDS |
| AAACAATTCAAATGTTCCGA+TGG | 0.597498 | 6:+15240106 | MsG0680031156.01.T01:CDS |
| AATTCTCTCTTCAACTGTCG+AGG | 0.602150 | 6:+15238101 | MsG0680031156.01.T01:CDS |
| CTTGATCAATGAAGGTGATG+AGG | 0.604833 | 6:+15239655 | MsG0680031156.01.T01:CDS |
| TCGTGTCAAAATTGAGCACA+AGG | 0.614456 | 6:+15240425 | MsG0680031156.01.T01:CDS |
| AAATATTTACAGATCTGTCA+AGG | 0.616151 | 6:+15239312 | MsG0680031156.01.T01:intron |
| CCCAAAGAGAGCAATGCAAG+TGG | 0.621311 | 6:-15238454 | None:intergenic |
| GGTGTTGATGATGATGAAGC+TGG | 0.627310 | 6:+15240369 | MsG0680031156.01.T01:CDS |
| ACGTGATAGAAACCCGACGA+TGG | 0.636755 | 6:+15240047 | MsG0680031156.01.T01:intron |
| GAGCACTCCGTTGTCAACTG+TGG | 0.647631 | 6:-15239415 | None:intergenic |
| TGTGGCCAATGAAGCACACT+GGG | 0.648324 | 6:-15239397 | None:intergenic |
| CTGTGGCCAATGAAGCACAC+TGG | 0.651523 | 6:-15239398 | None:intergenic |
| AAGAAGGCATCTGATGATGT+TGG | 0.653044 | 6:+15239891 | MsG0680031156.01.T01:CDS |
| AAGTCGCTGCATACATGACA+GGG | 0.654142 | 6:+15238730 | MsG0680031156.01.T01:CDS |
| TCATTGGCCACAGTTGACAA+CGG | 0.657149 | 6:+15239408 | MsG0680031156.01.T01:CDS |
| ATGTCTGCAGGATGTACCAG+AGG | 0.658971 | 6:+15240257 | MsG0680031156.01.T01:intron |
| AGGTCCATGGTTGAAGAAGG+GGG | 0.671399 | 6:+15237919 | None:intergenic |
| CAAGTCATCTGATAAAGACG+CGG | 0.674931 | 6:-15239154 | None:intergenic |
| TTGCAAGTGTAAAACTTGCA+AGG | 0.676512 | 6:+15239443 | MsG0680031156.01.T01:CDS |
| AAAGGATGGAAGGAAAAGCA+GGG | 0.682942 | 6:+15238301 | MsG0680031156.01.T01:CDS |
| TGATGAAGCTGGCCAGACGT+CGG | 0.684639 | 6:+15240380 | MsG0680031156.01.T01:CDS |
| AGTTTCGATCTCACATACAG+TGG | 0.711559 | 6:-15239346 | None:intergenic |
| ATATCAGTATAGTAGGTGTG+TGG | 0.749735 | 6:-15238523 | None:intergenic |
| AAGCATGATTGAGTCAACTG+AGG | 0.787148 | 6:+15239203 | MsG0680031156.01.T01:CDS |
| TGTATGTGAGATCGAAACTG+GGG | 0.791197 | 6:+15239350 | MsG0680031156.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAACATATAAAAATGTAAA+TGG | - | Chr6:15238759-15238778 | None:intergenic | 10.0% |
| !!! | TTTTATATGTTATAGAATAA+AGG | + | Chr6:15238766-15238785 | MsG0680031156.01.T01:intron | 10.0% |
| !! | ATTAATGTAATAATTACCAT+CGG | - | Chr6:15240125-15240144 | None:intergenic | 15.0% |
| !! | ATTGTCCAATTATTATTAAT+AGG | + | Chr6:15238989-15239008 | MsG0680031156.01.T01:intron | 15.0% |
| !! | TATATAATTGTATAAATGTG+TGG | + | Chr6:15239689-15239708 | MsG0680031156.01.T01:intron | 15.0% |
| !! | TGTAACCTATTAATAATAAT+TGG | - | Chr6:15238997-15239016 | None:intergenic | 15.0% |
| !!! | CATTTTTCATTCTAATAAAA+GGG | - | Chr6:15239086-15239105 | None:intergenic | 15.0% |
| !!! | GAAATTTTTAGATGTATTTT+TGG | + | Chr6:15239242-15239261 | MsG0680031156.01.T01:intron | 15.0% |
| !!! | TGTTGAATTTTTGAAAAATT+AGG | + | Chr6:15238645-15238664 | MsG0680031156.01.T01:intron | 15.0% |
| !! | AATAATTACCAATTGTGTTA+CGG | - | Chr6:15240172-15240191 | None:intergenic | 20.0% |
| !! | GATATAGTTGATTATTTGAT+AGG | + | Chr6:15239534-15239553 | MsG0680031156.01.T01:intron | 20.0% |
| !! | TACATAATTTCAGATGTTAT+TGG | + | Chr6:15238242-15238261 | MsG0680031156.01.T01:intron | 20.0% |
| !! | TATTACCAAAATATCAATTC+AGG | - | Chr6:15238417-15238436 | None:intergenic | 20.0% |
| !! | TTTGAAAAATTAGGTTCTAT+GGG | + | Chr6:15238654-15238673 | MsG0680031156.01.T01:intron | 20.0% |
| !! | TTTGTATGTTTCTTTATATC+TGG | + | Chr6:15238358-15238377 | MsG0680031156.01.T01:intron | 20.0% |
| !!! | ACATTTTATTATTTTTGAGC+AGG | + | Chr6:15239752-15239771 | MsG0680031156.01.T01:intron | 20.0% |
| !!! | ATCTGAAATTATGTATACAA+AGG | - | Chr6:15238237-15238256 | None:intergenic | 20.0% |
| !!! | CATTTTATTATTTTTGAGCA+GGG | + | Chr6:15239753-15239772 | MsG0680031156.01.T01:intron | 20.0% |
| !!! | GCATTTTTCATTCTAATAAA+AGG | - | Chr6:15239087-15239106 | None:intergenic | 20.0% |
| !!! | GTTCAATATTTTTATGCAAA+AGG | + | Chr6:15239284-15239303 | MsG0680031156.01.T01:intron | 20.0% |
| !!! | TTTTAATGAAGGTCATTATA+AGG | + | Chr6:15237972-15237991 | MsG0680031156.01.T01:CDS | 20.0% |
| !!! | TTTTGAAAAATTAGGTTCTA+TGG | + | Chr6:15238653-15238672 | MsG0680031156.01.T01:intron | 20.0% |
| ! | AAATATTTACAGATCTGTCA+AGG | + | Chr6:15239312-15239331 | MsG0680031156.01.T01:intron | 25.0% |
| ! | AATATCAATTCAGGAACATA+AGG | - | Chr6:15238408-15238427 | None:intergenic | 25.0% |
| ! | AATTGAAAGAGGTGATATAA+GGG | + | Chr6:15238271-15238290 | MsG0680031156.01.T01:CDS | 25.0% |
| ! | ATCACGTATACATCAATAAA+GGG | - | Chr6:15240034-15240053 | None:intergenic | 25.0% |
| ! | CAAATGTATGAAATTCCTAA+AGG | - | Chr6:15238201-15238220 | None:intergenic | 25.0% |
| ! | CAATTTGATCAATTGTGTTA+CGG | - | Chr6:15240227-15240246 | None:intergenic | 25.0% |
| ! | GTAGAACATAACTGATATTA+CGG | + | Chr6:15239951-15239970 | MsG0680031156.01.T01:intron | 25.0% |
| ! | TAATTGAAAGAGGTGATATA+AGG | + | Chr6:15238270-15238289 | MsG0680031156.01.T01:CDS | 25.0% |
| ! | TATCACGTATACATCAATAA+AGG | - | Chr6:15240035-15240054 | None:intergenic | 25.0% |
| ! | TTATAGAATAATGCGCATAA+AGG | + | Chr6:15239985-15240004 | MsG0680031156.01.T01:intron | 25.0% |
| !! | ATGTTAGTACAAATTTTCGT+CGG | - | Chr6:15239736-15239755 | None:intergenic | 25.0% |
| !! | ATGTTCCTGAATTGATATTT+TGG | + | Chr6:15238409-15238428 | MsG0680031156.01.T01:intron | 25.0% |
| !! | ATTGTTAGTGGATATCTTTA+GGG | - | Chr6:15238865-15238884 | None:intergenic | 25.0% |
| !! | TATTGTTAGTGGATATCTTT+AGG | - | Chr6:15238866-15238885 | None:intergenic | 25.0% |
| !!! | AGAATAAAGGCAAGTTTTTT+TGG | + | Chr6:15238779-15238798 | MsG0680031156.01.T01:intron | 25.0% |
| !!! | ATTTTTGTTTTTATCATGCG+TGG | + | Chr6:15239502-15239521 | MsG0680031156.01.T01:intron | 25.0% |
| AAACAATTCAAATGTTCCGA+TGG | + | Chr6:15240106-15240125 | MsG0680031156.01.T01:CDS | 30.0% | |
| AAATGTGTGGTCTATATATG+AGG | + | Chr6:15239702-15239721 | MsG0680031156.01.T01:intron | 30.0% | |
| AACTGCAATATCAGTATAGT+AGG | - | Chr6:15238533-15238552 | None:intergenic | 30.0% | |
| AAGTTAATCCGTAACACAAT+TGG | + | Chr6:15240161-15240180 | MsG0680031156.01.T01:intron | 30.0% | |
| ACATGTATTTAGGTATGTCA+TGG | + | Chr6:15238564-15238583 | MsG0680031156.01.T01:intron | 30.0% | |
| ATCAAAAAGGACAAAAGTAG+TGG | - | Chr6:15239597-15239616 | None:intergenic | 30.0% | |
| ATCGGAACATTTGAATTGTT+TGG | - | Chr6:15240107-15240126 | None:intergenic | 30.0% | |
| ATTCCTAAAGGAATGCTTAT+AGG | - | Chr6:15238189-15238208 | None:intergenic | 30.0% | |
| ATTGGTCATGTAATTGAAAG+AGG | + | Chr6:15238260-15238279 | MsG0680031156.01.T01:CDS | 30.0% | |
| CATCAGAAAACTATTGTTAG+TGG | - | Chr6:15238877-15238896 | None:intergenic | 30.0% | |
| GAGTTGTTAATGCCTTTAAT+GGG | + | Chr6:15238676-15238695 | MsG0680031156.01.T01:CDS | 30.0% | |
| GGATAAAATTTGTATCCCTT+GGG | - | Chr6:15239475-15239494 | None:intergenic | 30.0% | |
| TCATGCTTTCAATTGTCATT+CGG | - | Chr6:15239191-15239210 | None:intergenic | 30.0% | |
| TGAACTCAAAAACGTTCATA+GGG | - | Chr6:15238068-15238087 | None:intergenic | 30.0% | |
| TGATATAAGGGAAACTGAAA+AGG | + | Chr6:15238283-15238302 | MsG0680031156.01.T01:CDS | 30.0% | |
| TTGAACTCAAAAACGTTCAT+AGG | - | Chr6:15238069-15238088 | None:intergenic | 30.0% | |
| ! | CACTAACAATAGTTTTCTGA+TGG | + | Chr6:15238875-15238894 | MsG0680031156.01.T01:intron | 30.0% |
| ! | GAAATGTCGTAAAGAAGTAT+TGG | + | Chr6:15239856-15239875 | MsG0680031156.01.T01:CDS | 30.0% |
| ! | TGACAAGCAAATTCTTTTCA+AGG | + | Chr6:15239818-15239837 | MsG0680031156.01.T01:CDS | 30.0% |
| ! | TGTGTTACGGATTAACTTTA+TGG | - | Chr6:15240159-15240178 | None:intergenic | 30.0% |
| !! | GCAATTGTAGGTTTTAATGA+AGG | + | Chr6:15237961-15237980 | MsG0680031156.01.T01:CDS | 30.0% |
| !! | TCTAATAGCATTGACTTAGT+GGG | + | Chr6:15240348-15240367 | MsG0680031156.01.T01:CDS | 30.0% |
| !!! | GACAAAATTGTGACCTTTTT+TGG | + | Chr6:15238488-15238507 | MsG0680031156.01.T01:CDS | 30.0% |
| AATAAGCTACCCATAAACGA+TGG | - | Chr6:15238832-15238851 | None:intergenic | 35.0% | |
| ATAAGCTACCCATAAACGAT+GGG | - | Chr6:15238831-15238850 | None:intergenic | 35.0% | |
| ATAAGGGAAACTGAAAAGGA+TGG | + | Chr6:15238287-15238306 | MsG0680031156.01.T01:CDS | 35.0% | |
| ATATCAGTATAGTAGGTGTG+TGG | - | Chr6:15238526-15238545 | None:intergenic | 35.0% | |
| ATCAGCACATTAAAATCAGC+AGG | - | Chr6:15239798-15239817 | None:intergenic | 35.0% | |
| ATCATCAGATGCCTTCTTTA+CGG | - | Chr6:15239889-15239908 | None:intergenic | 35.0% | |
| CACTAAGTCAATGCTATTAG+AGG | - | Chr6:15240349-15240368 | None:intergenic | 35.0% | |
| CAGCTTGAAAATGCAATTGT+AGG | + | Chr6:15237949-15237968 | MsG0680031156.01.T01:CDS | 35.0% | |
| CGGATAAAATTTGTATCCCT+TGG | - | Chr6:15239476-15239495 | None:intergenic | 35.0% | |
| CTACCTATAAGCATTCCTTT+AGG | + | Chr6:15238183-15238202 | MsG0680031156.01.T01:intron | 35.0% | |
| GGAGTTGTTAATGCCTTTAA+TGG | + | Chr6:15238675-15238694 | MsG0680031156.01.T01:CDS | 35.0% | |
| GGTTATTGATCTCACTTTAG+AGG | + | Chr6:15238322-15238341 | MsG0680031156.01.T01:CDS | 35.0% | |
| TATCAGCTTAGTCCCATTAA+AGG | - | Chr6:15238691-15238710 | None:intergenic | 35.0% | |
| TCGTTTATGGGTAGCTTATT+TGG | + | Chr6:15238832-15238851 | MsG0680031156.01.T01:intron | 35.0% | |
| TGCAAGACACACATGTATTT+AGG | + | Chr6:15238554-15238573 | MsG0680031156.01.T01:CDS | 35.0% | |
| TTGCAAGTGTAAAACTTGCA+AGG | + | Chr6:15239443-15239462 | MsG0680031156.01.T01:CDS | 35.0% | |
| TTGGAATTATGCCGTAAAGA+AGG | + | Chr6:15239875-15239894 | MsG0680031156.01.T01:CDS | 35.0% | |
| ! | TTGGTCGTAATTAAGTTGTC+TGG | + | Chr6:15238798-15238817 | MsG0680031156.01.T01:intron | 35.0% |
| ! | TTTTGTCCTTTTTGATCGCT+AGG | + | Chr6:15239601-15239620 | MsG0680031156.01.T01:intron | 35.0% |
| !! | AATTTTGACACGAACAACTC+TGG | - | Chr6:15240418-15240437 | None:intergenic | 35.0% |
| !! | ATTCTTTTCAAGGTTGAGGT+TGG | + | Chr6:15239828-15239847 | MsG0680031156.01.T01:CDS | 35.0% |
| !! | CTCTAATAGCATTGACTTAG+TGG | + | Chr6:15240347-15240366 | MsG0680031156.01.T01:CDS | 35.0% |
| !! | GCAAATTCTTTTCAAGGTTG+AGG | + | Chr6:15239824-15239843 | MsG0680031156.01.T01:CDS | 35.0% |
| AAAACGTTCATAGGGATAGC+AGG | - | Chr6:15238060-15238079 | None:intergenic | 40.0% | |
| AAAAGGATGGAAGGAAAAGC+AGG | + | Chr6:15238300-15238319 | MsG0680031156.01.T01:CDS | 40.0% | |
| AAAGGATGGAAGGAAAAGCA+GGG | + | Chr6:15238301-15238320 | MsG0680031156.01.T01:CDS | 40.0% | |
| AAGCATGATTGAGTCAACTG+AGG | + | Chr6:15239203-15239222 | MsG0680031156.01.T01:CDS | 40.0% | |
| AATTCTCTCTTCAACTGTCG+AGG | + | Chr6:15238101-15238120 | MsG0680031156.01.T01:CDS | 40.0% | |
| ACTGTATGTGAGATCGAAAC+TGG | + | Chr6:15239348-15239367 | MsG0680031156.01.T01:CDS | 40.0% | |
| AGACTCAAGTAGCAAGGTAA+GGG | - | Chr6:15239038-15239057 | None:intergenic | 40.0% | |
| AGTTTCGATCTCACATACAG+TGG | - | Chr6:15239349-15239368 | None:intergenic | 40.0% | |
| ATCTGTTGTTGAGCTTAGTG+TGG | + | Chr6:15240070-15240089 | MsG0680031156.01.T01:CDS | 40.0% | |
| CAAGTCATCTGATAAAGACG+CGG | - | Chr6:15239157-15239176 | None:intergenic | 40.0% | |
| CACATTACGCCCAATAAACT+GGG | - | Chr6:15239630-15239649 | None:intergenic | 40.0% | |
| CGCTACTCTTCTATTGACAT+TGG | + | Chr6:15239058-15239077 | MsG0680031156.01.T01:intron | 40.0% | |
| CTGTATGTGAGATCGAAACT+GGG | + | Chr6:15239349-15239368 | MsG0680031156.01.T01:CDS | 40.0% | |
| CTTGATCAATGAAGGTGATG+AGG | + | Chr6:15239655-15239674 | MsG0680031156.01.T01:CDS | 40.0% | |
| GAAGATGTGCACACAGTAAA+AGG | + | Chr6:15238932-15238951 | MsG0680031156.01.T01:intron | 40.0% | |
| GCTTTCAATTGTCATTCGGT+TGG | - | Chr6:15239187-15239206 | None:intergenic | 40.0% | |
| GGGACTAAGCTGATACTTAA+TGG | + | Chr6:15238696-15238715 | MsG0680031156.01.T01:CDS | 40.0% | |
| GTGCAAGACTTGATCAATGA+AGG | + | Chr6:15239647-15239666 | MsG0680031156.01.T01:CDS | 40.0% | |
| GTTGTCATGGTTGCCAAAAA+AGG | - | Chr6:15238504-15238523 | None:intergenic | 40.0% | |
| TCGTGTCAAAATTGAGCACA+AGG | + | Chr6:15240425-15240444 | MsG0680031156.01.T01:CDS | 40.0% | |
| TGTATGTGAGATCGAAACTG+GGG | + | Chr6:15239350-15239369 | MsG0680031156.01.T01:CDS | 40.0% | |
| ! | GTCGTAATTAAGTTGTCTGG+AGG | + | Chr6:15238801-15238820 | MsG0680031156.01.T01:intron | 40.0% |
| !! | AAGAAGGCATCTGATGATGT+TGG | + | Chr6:15239891-15239910 | MsG0680031156.01.T01:CDS | 40.0% |
| AAGTCGCTGCATACATGACA+GGG | + | Chr6:15238730-15238749 | MsG0680031156.01.T01:CDS | 45.0% | |
| ACCACTTGCATTGCTCTCTT+TGG | + | Chr6:15238453-15238472 | MsG0680031156.01.T01:CDS | 45.0% | |
| CACTTGCATTGCTCTCTTTG+GGG | + | Chr6:15238455-15238474 | MsG0680031156.01.T01:CDS | 45.0% | |
| CATGATTGAGTCAACTGAGG+TGG | + | Chr6:15239206-15239225 | MsG0680031156.01.T01:intron | 45.0% | |
| CCACTTGCATTGCTCTCTTT+GGG | + | Chr6:15238454-15238473 | MsG0680031156.01.T01:CDS | 45.0% | |
| CTCAACAACAGATCCATCGT+CGG | - | Chr6:15240063-15240082 | None:intergenic | 45.0% | |
| GAGACTCAAGTAGCAAGGTA+AGG | - | Chr6:15239039-15239058 | None:intergenic | 45.0% | |
| GCACATTACGCCCAATAAAC+TGG | - | Chr6:15239631-15239650 | None:intergenic | 45.0% | |
| GCTAGGTGACCCAGTTTATT+GGG | + | Chr6:15239618-15239637 | MsG0680031156.01.T01:intron | 45.0% | |
| GGGAAACTGAAAAGGATGGA+AGG | + | Chr6:15238291-15238310 | MsG0680031156.01.T01:CDS | 45.0% | |
| GTTGTTGAGCTTAGTGTGGA+TGG | + | Chr6:15240074-15240093 | MsG0680031156.01.T01:CDS | 45.0% | |
| TAGTAGGTGTGTGGTTGTCA+TGG | - | Chr6:15238517-15238536 | None:intergenic | 45.0% | |
| TCAACAACAGATCCATCGTC+GGG | - | Chr6:15240062-15240081 | None:intergenic | 45.0% | |
| TCATTGGCCACAGTTGACAA+CGG | + | Chr6:15239408-15239427 | MsG0680031156.01.T01:CDS | 45.0% | |
| TTGACACGAACAACTCTGGT+AGG | - | Chr6:15240414-15240433 | None:intergenic | 45.0% | |
| ! | AGATCGAAACTGGGGTTGAT+TGG | + | Chr6:15239358-15239377 | MsG0680031156.01.T01:CDS | 45.0% |
| !! | AACTGTCGAGGAAGTGTCTA+CGG | + | Chr6:15238113-15238132 | MsG0680031156.01.T01:CDS | 45.0% |
| !! | ATTTTTGAGCAGGGAGCAGT+AGG | + | Chr6:15239762-15239781 | MsG0680031156.01.T01:intron | 45.0% |
| !! | GGTGTTGATGATGATGAAGC+TGG | + | Chr6:15240369-15240388 | MsG0680031156.01.T01:CDS | 45.0% |
| !! | TTCAAGGTTGAGGTTGGTGA+AGG | + | Chr6:15239834-15239853 | MsG0680031156.01.T01:CDS | 45.0% |
| !!! | TTAGCACCTGTTTTGGTGGT+TGG | - | Chr6:15240321-15240340 | None:intergenic | 45.0% |
| !! | ATAAAAACAAAAATTATATT+CGG | - | Chr6:15239496-15239515 | None:intergenic | 5.0% |
| ACGTGATAGAAACCCGACGA+TGG | + | Chr6:15240047-15240066 | MsG0680031156.01.T01:intron | 50.0% | |
| AGCTACCCATAAACGATGGG+AGG | - | Chr6:15238828-15238847 | None:intergenic | 50.0% | |
| ATGCACCCAGTGTGCTTCAT+TGG | + | Chr6:15239392-15239411 | MsG0680031156.01.T01:CDS | 50.0% | |
| ATGTCTGCAGGATGTACCAG+AGG | + | Chr6:15240257-15240276 | MsG0680031156.01.T01:intron | 50.0% | |
| CAAGCTGCATGTCAACGTGA+TGG | + | Chr6:15239559-15239578 | MsG0680031156.01.T01:intron | 50.0% | |
| CCACCAAAACAGGTGCTAAG+AGG | + | Chr6:15240322-15240341 | MsG0680031156.01.T01:CDS | 50.0% | |
| CCCAAAGAGAGCAATGCAAG+TGG | - | Chr6:15238457-15238476 | None:intergenic | 50.0% | |
| CGCTAGGTGACCCAGTTTAT+TGG | + | Chr6:15239617-15239636 | MsG0680031156.01.T01:intron | 50.0% | |
| CGGAGCTGTTCGTTGAAATC+TGG | - | Chr6:15239137-15239156 | None:intergenic | 50.0% | |
| CTGGTACATCCTGCAGACAT+TGG | - | Chr6:15240257-15240276 | None:intergenic | 50.0% | |
| GAAGTCGCTGCATACATGAC+AGG | + | Chr6:15238729-15238748 | MsG0680031156.01.T01:CDS | 50.0% | |
| GACACACCAACCACCAAAAC+AGG | + | Chr6:15240312-15240331 | MsG0680031156.01.T01:CDS | 50.0% | |
| GAGGTCCTCCCATCGTTTAT+GGG | + | Chr6:15238820-15238839 | MsG0680031156.01.T01:intron | 50.0% | |
| GATAGCAGGCGAGTGTACTT+TGG | - | Chr6:15238046-15238065 | None:intergenic | 50.0% | |
| GGGTCACCTAGCGATCAAAA+AGG | - | Chr6:15239610-15239629 | None:intergenic | 50.0% | |
| GTAGCGAGACTCAAGTAGCA+AGG | - | Chr6:15239044-15239063 | None:intergenic | 50.0% | |
| GTCATGTATGCAGCGACTTC+AGG | - | Chr6:15238729-15238748 | None:intergenic | 50.0% | |
| TGTGGCCAATGAAGCACACT+GGG | - | Chr6:15239400-15239419 | None:intergenic | 50.0% | |
| TGTTTGTCGCCAATGTCTGC+AGG | + | Chr6:15240245-15240264 | MsG0680031156.01.T01:intron | 50.0% | |
| ! | GGACCTCTTAGCACCTGTTT+TGG | - | Chr6:15240328-15240347 | None:intergenic | 50.0% |
| !! | ACTGTCGAGGAAGTGTCTAC+GGG | + | Chr6:15238114-15238133 | MsG0680031156.01.T01:CDS | 50.0% |
| !! | CCTCTTAGCACCTGTTTTGG+TGG | - | Chr6:15240325-15240344 | None:intergenic | 50.0% |
| !! | TAGGTTTTGTGACCGACGTC+TGG | - | Chr6:15240395-15240414 | None:intergenic | 50.0% |
| !! | TCAACGTGATGGACGACACA+AGG | + | Chr6:15239570-15239589 | MsG0680031156.01.T01:intron | 50.0% |
| ACTTGCAAGGTGCAGTCCCA+AGG | + | Chr6:15239456-15239475 | MsG0680031156.01.T01:intron | 55.0% | |
| CTGTGGCCAATGAAGCACAC+TGG | - | Chr6:15239401-15239420 | None:intergenic | 55.0% | |
| CTTGCAAGGTGCAGTCCCAA+GGG | + | Chr6:15239457-15239476 | MsG0680031156.01.T01:intron | 55.0% | |
| GAGCACTCCGTTGTCAACTG+TGG | - | Chr6:15239418-15239437 | None:intergenic | 55.0% | |
| GGAGGTCCTCCCATCGTTTA+TGG | + | Chr6:15238819-15238838 | MsG0680031156.01.T01:intron | 55.0% | |
| TGATGAAGCTGGCCAGACGT+CGG | + | Chr6:15240380-15240399 | MsG0680031156.01.T01:CDS | 55.0% | |
| TTGCATGAGTCCTCAGCCTC+TGG | - | Chr6:15240276-15240295 | None:intergenic | 55.0% | |
| GCAGGATGTACCAGAGGCTG+AGG | + | Chr6:15240263-15240282 | MsG0680031156.01.T01:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 15237925 | 15240464 | 15237925 | ID=MsG0680031156.01;Name=MsG0680031156.01 |
| Chr6 | mRNA | 15237925 | 15240464 | 15237925 | ID=MsG0680031156.01.T01;Parent=MsG0680031156.01;Name=MsG0680031156.01.T01;_AED=0.65;_eAED=0.65;_QI=0|0|0|0.6|1|1|10|0|430 |
| Chr6 | exon | 15237925 | 15238135 | 15237925 | ID=MsG0680031156.01.T01:exon:10239;Parent=MsG0680031156.01.T01 |
| Chr6 | exon | 15238255 | 15238351 | 15238255 | ID=MsG0680031156.01.T01:exon:10240;Parent=MsG0680031156.01.T01 |
| Chr6 | exon | 15238448 | 15238575 | 15238448 | ID=MsG0680031156.01.T01:exon:10241;Parent=MsG0680031156.01.T01 |
| Chr6 | exon | 15238667 | 15238751 | 15238667 | ID=MsG0680031156.01.T01:exon:10242;Parent=MsG0680031156.01.T01 |
| Chr6 | exon | 15239095 | 15239224 | 15239095 | ID=MsG0680031156.01.T01:exon:10243;Parent=MsG0680031156.01.T01 |
| Chr6 | exon | 15239324 | 15239464 | 15239324 | ID=MsG0680031156.01.T01:exon:10244;Parent=MsG0680031156.01.T01 |
| Chr6 | exon | 15239623 | 15239676 | 15239623 | ID=MsG0680031156.01.T01:exon:10245;Parent=MsG0680031156.01.T01 |
| Chr6 | exon | 15239774 | 15239950 | 15239774 | ID=MsG0680031156.01.T01:exon:10246;Parent=MsG0680031156.01.T01 |
| Chr6 | exon | 15240056 | 15240127 | 15240056 | ID=MsG0680031156.01.T01:exon:10247;Parent=MsG0680031156.01.T01 |
| Chr6 | exon | 15240267 | 15240464 | 15240267 | ID=MsG0680031156.01.T01:exon:10248;Parent=MsG0680031156.01.T01 |
| Chr6 | CDS | 15237925 | 15238135 | 15237925 | ID=MsG0680031156.01.T01:cds;Parent=MsG0680031156.01.T01 |
| Chr6 | CDS | 15238255 | 15238351 | 15238255 | ID=MsG0680031156.01.T01:cds;Parent=MsG0680031156.01.T01 |
| Chr6 | CDS | 15238448 | 15238575 | 15238448 | ID=MsG0680031156.01.T01:cds;Parent=MsG0680031156.01.T01 |
| Chr6 | CDS | 15238667 | 15238751 | 15238667 | ID=MsG0680031156.01.T01:cds;Parent=MsG0680031156.01.T01 |
| Chr6 | CDS | 15239095 | 15239224 | 15239095 | ID=MsG0680031156.01.T01:cds;Parent=MsG0680031156.01.T01 |
| Chr6 | CDS | 15239324 | 15239464 | 15239324 | ID=MsG0680031156.01.T01:cds;Parent=MsG0680031156.01.T01 |
| Chr6 | CDS | 15239623 | 15239676 | 15239623 | ID=MsG0680031156.01.T01:cds;Parent=MsG0680031156.01.T01 |
| Chr6 | CDS | 15239774 | 15239950 | 15239774 | ID=MsG0680031156.01.T01:cds;Parent=MsG0680031156.01.T01 |
| Chr6 | CDS | 15240056 | 15240127 | 15240056 | ID=MsG0680031156.01.T01:cds;Parent=MsG0680031156.01.T01 |
| Chr6 | CDS | 15240267 | 15240464 | 15240267 | ID=MsG0680031156.01.T01:cds;Parent=MsG0680031156.01.T01 |
| Gene Sequence |
| Protein sequence |
