Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780036498.01.T01 | PNX85850.1 | 60.377 | 212 | 32 | 3 | 191 | 350 | 217 | 428 | 6.61E-67 | 229 |
MsG0780036498.01.T01 | PNX85850.1 | 87.5 | 64 | 8 | 0 | 128 | 191 | 1 | 64 | 2.76E-25 | 117 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780036498.01.T01 | P10978 | 48.78 | 82 | 41 | 1 | 269 | 350 | 1203 | 1283 | 1.55E-15 | 81.6 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780036498.01.T01 | A0A2K3M4Z2 | 60.377 | 212 | 32 | 3 | 191 | 350 | 217 | 428 | 3.16e-67 | 229 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080047869.01 | MsG0780036498.01 | 0.804368 | 2.234253e-49 | 1.149928e-46 |
MsG0080047925.01 | MsG0780036498.01 | 0.833980 | 3.903240e-56 | 4.569317e-53 |
MsG0080048396.01 | MsG0780036498.01 | 0.835289 | 1.829481e-56 | 2.227457e-53 |
MsG0080048431.01 | MsG0780036498.01 | 0.830507 | 2.824951e-55 | 2.982120e-52 |
MsG0080048874.01 | MsG0780036498.01 | 0.816156 | 6.393312e-52 | 4.495548e-49 |
MsG0180000447.01 | MsG0780036498.01 | 0.807755 | 4.328537e-50 | 2.430909e-47 |
MsG0180000470.01 | MsG0780036498.01 | 0.804134 | 2.499097e-49 | 1.278515e-46 |
MsG0180000748.01 | MsG0780036498.01 | 0.829064 | 6.344583e-55 | 6.422069e-52 |
MsG0180001410.01 | MsG0780036498.01 | 0.822666 | 2.096760e-53 | 1.766439e-50 |
MsG0180002089.01 | MsG0780036498.01 | 0.829428 | 5.177098e-55 | 5.297104e-52 |
MsG0180002195.01 | MsG0780036498.01 | 0.852549 | 4.290600e-61 | 8.996957e-58 |
MsG0180002518.01 | MsG0780036498.01 | 0.838871 | 2.223308e-57 | 3.017459e-54 |
MsG0180003361.01 | MsG0780036498.01 | 0.807565 | 4.750670e-50 | 2.654678e-47 |
MsG0180003669.01 | MsG0780036498.01 | 0.827353 | 1.639373e-54 | 1.578948e-51 |
MsG0180004264.01 | MsG0780036498.01 | 0.820758 | 5.791530e-53 | 4.623422e-50 |
MsG0180004306.01 | MsG0780036498.01 | 0.809488 | 1.846192e-50 | 1.085363e-47 |
MsG0180004847.01 | MsG0780036498.01 | 0.810916 | 9.085810e-51 | 5.547483e-48 |
MsG0280011318.01 | MsG0780036498.01 | 0.800443 | 1.437847e-48 | 6.695922e-46 |
MsG0380011574.01 | MsG0780036498.01 | 0.834794 | 2.439097e-56 | 2.925207e-53 |
MsG0380011870.01 | MsG0780036498.01 | 0.826743 | 2.294093e-54 | 2.170193e-51 |
MsG0380012702.01 | MsG0780036498.01 | 0.812069 | 5.104140e-51 | 3.212980e-48 |
MsG0380012885.01 | MsG0780036498.01 | 0.813232 | 2.840051e-51 | 1.844186e-48 |
MsG0380013596.01 | MsG0780036498.01 | 0.823097 | 1.664082e-53 | 1.419158e-50 |
MsG0380014135.01 | MsG0780036498.01 | 0.815686 | 8.140316e-52 | 5.650893e-49 |
MsG0380014573.01 | MsG0780036498.01 | 0.814325 | 1.631870e-51 | 1.091634e-48 |
MsG0380014867.01 | MsG0780036498.01 | 0.839709 | 1.346948e-57 | 1.875596e-54 |
MsG0680030800.01 | MsG0780036498.01 | 0.805057 | 1.603724e-49 | 8.402142e-47 |
MsG0680031156.01 | MsG0780036498.01 | 0.816391 | 5.666803e-52 | 4.010177e-49 |
MsG0680031896.01 | MsG0780036498.01 | 0.823220 | 1.557378e-53 | 1.332694e-50 |
MsG0680032801.01 | MsG0780036498.01 | 0.826762 | 2.270821e-54 | 2.149317e-51 |
MsG0680032844.01 | MsG0780036498.01 | 0.852587 | 4.184856e-61 | 8.785765e-58 |
MsG0680033187.01 | MsG0780036498.01 | 0.818942 | 1.506082e-52 | 1.143315e-49 |
MsG0680033379.01 | MsG0780036498.01 | 0.831117 | 2.002274e-55 | 2.152113e-52 |
MsG0680034538.01 | MsG0780036498.01 | 0.803846 | 2.868089e-49 | 1.456558e-46 |
MsG0680035573.01 | MsG0780036498.01 | 0.803441 | 3.480236e-49 | 1.749043e-46 |
MsG0480018450.01 | MsG0780036498.01 | 0.810821 | 9.526172e-51 | 5.801394e-48 |
MsG0480019337.01 | MsG0780036498.01 | 0.808488 | 3.022010e-50 | 1.730185e-47 |
MsG0480020634.01 | MsG0780036498.01 | 0.810887 | 9.215916e-51 | 5.622599e-48 |
MsG0480021350.01 | MsG0780036498.01 | 0.862814 | 3.880371e-64 | 1.151701e-60 |
MsG0480023654.01 | MsG0780036498.01 | 0.816754 | 4.698420e-52 | 3.358140e-49 |
MsG0480023718.01 | MsG0780036498.01 | 0.805803 | 1.119278e-49 | 5.977428e-47 |
MsG0580024416.01 | MsG0780036498.01 | 0.808045 | 3.756077e-50 | 2.125449e-47 |
MsG0580024621.01 | MsG0780036498.01 | 0.834975 | 2.196093e-56 | 2.648580e-53 |
MsG0580026040.01 | MsG0780036498.01 | 0.802360 | 5.820941e-49 | 2.845878e-46 |
MsG0380014977.01 | MsG0780036498.01 | 0.814737 | 1.322541e-51 | 8.946126e-49 |
MsG0380016475.01 | MsG0780036498.01 | 0.854634 | 1.080482e-61 | 2.428638e-58 |
MsG0380017233.01 | MsG0780036498.01 | 0.800849 | 1.187968e-48 | 5.589679e-46 |
MsG0380017266.01 | MsG0780036498.01 | -0.813376 | 2.641380e-51 | 1.722093e-48 |
MsG0380017312.01 | MsG0780036498.01 | 0.812889 | 3.378131e-51 | 2.173537e-48 |
MsG0380017821.01 | MsG0780036498.01 | 0.808532 | 2.956916e-50 | 1.694859e-47 |
MsG0380017822.01 | MsG0780036498.01 | 0.810373 | 1.190767e-50 | 7.165288e-48 |
MsG0580026222.01 | MsG0780036498.01 | 0.831951 | 1.247441e-55 | 1.374545e-52 |
MsG0580026276.01 | MsG0780036498.01 | 0.813573 | 2.390289e-51 | 1.566709e-48 |
MsG0580026434.01 | MsG0780036498.01 | 0.802683 | 4.993115e-49 | 2.461187e-46 |
MsG0580026631.01 | MsG0780036498.01 | 0.803275 | 3.767717e-49 | 1.885431e-46 |
MsG0580027332.01 | MsG0780036498.01 | 0.851770 | 7.146689e-61 | 1.461933e-57 |
MsG0580027369.01 | MsG0780036498.01 | 0.833272 | 5.864837e-56 | 6.720558e-53 |
MsG0580027687.01 | MsG0780036498.01 | 0.848830 | 4.773343e-60 | 8.872148e-57 |
MsG0580027688.01 | MsG0780036498.01 | 0.851232 | 1.014555e-60 | 2.039929e-57 |
MsG0580027832.01 | MsG0780036498.01 | 0.827253 | 1.732406e-54 | 1.663586e-51 |
MsG0580027833.01 | MsG0780036498.01 | 0.811691 | 6.167604e-51 | 3.843192e-48 |
MsG0580027966.01 | MsG0780036498.01 | 0.802118 | 6.530484e-49 | 3.172858e-46 |
MsG0580028378.01 | MsG0780036498.01 | 0.804699 | 1.905361e-49 | 9.890580e-47 |
MsG0580028990.01 | MsG0780036498.01 | 0.821613 | 3.679611e-53 | 3.008141e-50 |
MsG0580029204.01 | MsG0780036498.01 | 0.819184 | 1.327247e-52 | 1.014136e-49 |
MsG0580029381.01 | MsG0780036498.01 | 0.804774 | 1.838097e-49 | 9.560044e-47 |
MsG0580029554.01 | MsG0780036498.01 | 0.842211 | 2.970256e-58 | 4.471231e-55 |
MsG0680030316.01 | MsG0780036498.01 | 0.800180 | 1.626787e-48 | 7.525052e-46 |
MsG0680030667.01 | MsG0780036498.01 | 0.802083 | 6.636825e-49 | 3.221821e-46 |
MsG0280006456.01 | MsG0780036498.01 | 0.840395 | 8.924537e-58 | 1.269588e-54 |
MsG0280007458.01 | MsG0780036498.01 | 0.828473 | 8.814974e-55 | 8.770896e-52 |
MsG0280008135.01 | MsG0780036498.01 | 0.827712 | 1.344720e-54 | 1.308570e-51 |
MsG0280008615.01 | MsG0780036498.01 | 0.831302 | 1.802980e-55 | 1.948543e-52 |
MsG0280008759.01 | MsG0780036498.01 | 0.814147 | 1.786637e-51 | 1.189383e-48 |
MsG0280009248.01 | MsG0780036498.01 | 0.825911 | 3.620386e-54 | 3.344864e-51 |
MsG0280009306.01 | MsG0780036498.01 | 0.815683 | 8.152737e-52 | 5.658973e-49 |
MsG0280009371.01 | MsG0780036498.01 | 0.820496 | 6.651205e-53 | 5.271181e-50 |
MsG0280009530.01 | MsG0780036498.01 | 0.806145 | 9.481803e-50 | 5.108183e-47 |
MsG0280010443.01 | MsG0780036498.01 | 0.811343 | 7.340801e-51 | 4.532365e-48 |
MsG0680035896.01 | MsG0780036498.01 | 0.828888 | 6.997100e-55 | 7.045848e-52 |
MsG0780036134.01 | MsG0780036498.01 | 0.839172 | 1.857021e-57 | 2.543476e-54 |
MsG0780036348.01 | MsG0780036498.01 | 0.813519 | 2.457012e-51 | 1.608107e-48 |
MsG0780036498.01 | MsG0780038386.01 | 0.824953 | 6.104916e-54 | 5.488437e-51 |
MsG0780036498.01 | MsG0780039117.01 | 0.815143 | 1.075008e-51 | 7.351576e-49 |
MsG0780036498.01 | MsG0780039252.01 | 0.809915 | 1.494174e-50 | 8.884228e-48 |
MsG0780036498.01 | MsG0780039282.01 | 0.844724 | 6.331593e-59 | 1.031459e-55 |
MsG0780036498.01 | MsG0780039737.01 | 0.811529 | 6.687738e-51 | 4.149861e-48 |
MsG0780036498.01 | MsG0780040296.01 | 0.807351 | 5.273769e-50 | 2.930824e-47 |
MsG0780036498.01 | MsG0780040788.01 | 0.802198 | 6.285422e-49 | 3.060005e-46 |
MsG0780036498.01 | MsG0880041916.01 | 0.812775 | 3.577216e-51 | 2.294617e-48 |
MsG0780036498.01 | MsG0880042232.01 | 0.801800 | 7.587609e-49 | 3.656920e-46 |
MsG0780036498.01 | MsG0880042301.01 | 0.813726 | 2.211938e-51 | 1.455851e-48 |
MsG0780036498.01 | MsG0880042800.01 | 0.833997 | 3.866917e-56 | 4.528753e-53 |
MsG0780036498.01 | MsG0880043088.01 | 0.828904 | 6.935129e-55 | 6.986840e-52 |
MsG0780036498.01 | MsG0880044542.01 | 0.800325 | 1.519743e-48 | 7.056351e-46 |
MsG0780036498.01 | MsG0880044554.01 | 0.832246 | 1.054497e-55 | 1.171827e-52 |
MsG0780036498.01 | MsG0880044574.01 | 0.805494 | 1.299031e-49 | 6.882450e-47 |
MsG0780036498.01 | MsG0880044644.01 | 0.874004 | 9.476756e-68 | 4.197326e-64 |
MsG0780036498.01 | MsG0880044788.01 | 0.810286 | 1.243105e-50 | 7.462976e-48 |
MsG0780036498.01 | MsG0880046505.01 | 0.825629 | 4.224037e-54 | 3.871219e-51 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780036498.01.T01 | MTR_3g448730 | 45.000 | 80 | 43 | 1 | 271 | 350 | 102 | 180 | 2.68e-18 | 83.2 |
MsG0780036498.01.T01 | MTR_8g059225 | 43.529 | 85 | 47 | 1 | 266 | 350 | 85 | 168 | 9.12e-18 | 80.5 |
MsG0780036498.01.T01 | MTR_6g472230 | 44.578 | 83 | 46 | 0 | 268 | 350 | 84 | 166 | 1.01e-14 | 76.3 |
MsG0780036498.01.T01 | MTR_4g007210 | 56.000 | 50 | 22 | 0 | 301 | 350 | 340 | 389 | 1.98e-12 | 68.2 |
MsG0780036498.01.T01 | MTR_3g093120 | 36.145 | 83 | 53 | 0 | 268 | 350 | 403 | 485 | 2.60e-12 | 68.2 |
MsG0780036498.01.T01 | MTR_8g018120 | 40.196 | 102 | 50 | 3 | 243 | 336 | 106 | 204 | 4.02e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 76 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCAAAGAACCCTGTGCTTCT+TGG | 0.281880 | 7:-8912181 | MsG0780036498.01.T01:CDS |
TAAGGAGTTTAAGAAATCTA+TGG | 0.298377 | 7:-8912878 | MsG0780036498.01.T01:intron |
TCTGTGCTTGTCAAAGTGTT+TGG | 0.318539 | 7:-8912288 | MsG0780036498.01.T01:CDS |
TCATCTAAGAAGATGGTAAC+AGG | 0.324766 | 7:-8914581 | MsG0780036498.01.T01:intron |
TCTAGGAATCCTATTGCTCC+TGG | 0.334836 | 7:-8912711 | MsG0780036498.01.T01:CDS |
TAACAGGGCTGCCGGGAATA+AGG | 0.343297 | 7:-8914565 | MsG0780036498.01.T01:CDS |
TAGCTCTATTGTTCCATCAT+TGG | 0.350194 | 7:+8912109 | None:intergenic |
ATGAGAAGAGTGCTAAGATT+TGG | 0.361199 | 7:-8915043 | MsG0780036498.01.T01:CDS |
TTGCTTGGTGTCCTTATTCC+CGG | 0.369445 | 7:+8914554 | None:intergenic |
AAAACAAAGTTGAATGAGAA+TGG | 0.372608 | 7:-8913355 | MsG0780036498.01.T01:CDS |
GTTTGTTTCCTGTCATGTAA+TGG | 0.396995 | 7:+8915000 | None:intergenic |
CGAAGAGTTCGCGAGAAACT+TGG | 0.397765 | 7:-8912262 | MsG0780036498.01.T01:CDS |
AAACTTGGTCACACTCAATC+TGG | 0.400078 | 7:-8912247 | MsG0780036498.01.T01:CDS |
CTCCGTGATCTTTCCAATGA+TGG | 0.400604 | 7:-8912122 | MsG0780036498.01.T01:CDS |
CAATCCCTTCCCCACTTGCT+TGG | 0.401853 | 7:+8914539 | None:intergenic |
TTGGGAGTTGACTATATTAC+CGG | 0.410465 | 7:-8913413 | MsG0780036498.01.T01:CDS |
ACAAAGTATAAGCAAATTGT+TGG | 0.420281 | 7:-8912645 | MsG0780036498.01.T01:CDS |
CAATAGAGAATAATAATACT+TGG | 0.420459 | 7:-8913432 | MsG0780036498.01.T01:CDS |
GGGTGAGACAACCACCAGTA+TGG | 0.436283 | 7:-8913602 | MsG0780036498.01.T01:CDS |
AACAGAAGAAATGCTCCTAA+TGG | 0.443725 | 7:-8915084 | MsG0780036498.01.T01:CDS |
AAAGATTTCGTGAGTGGAGA+AGG | 0.449589 | 7:-8913576 | MsG0780036498.01.T01:CDS |
AACTTGCACCCAGGAGCAAT+AGG | 0.452081 | 7:+8912702 | None:intergenic |
ACGAAATCTTTCATCCATAC+TGG | 0.457686 | 7:+8913588 | None:intergenic |
GGAAAGATGCACTATTTCCT+TGG | 0.462153 | 7:-8912829 | MsG0780036498.01.T01:CDS |
AAGCTGTCAAAAGTGAGAAA+TGG | 0.471998 | 7:-8913483 | MsG0780036498.01.T01:CDS |
GTTTAAGAAATCTATGGAAA+AGG | 0.478719 | 7:-8912872 | MsG0780036498.01.T01:CDS |
CACACTCGTCATGAGCCATT+AGG | 0.482057 | 7:+8915069 | None:intergenic |
GAAAGATCACGGAGAGGAAG+TGG | 0.484927 | 7:+8912131 | None:intergenic |
TGGGGAAGGGATTGTGTCAT+GGG | 0.490806 | 7:-8914530 | MsG0780036498.01.T01:intron |
CTTAATACATACATCAGATC+AGG | 0.492075 | 7:+8912594 | None:intergenic |
GAAGATGGTAACAGGGCTGC+CGG | 0.493656 | 7:-8914573 | MsG0780036498.01.T01:CDS |
GGACACCAAGCAAGTGGGGA+AGG | 0.496118 | 7:-8914544 | MsG0780036498.01.T01:CDS |
CATCCAGAGGCTCTAGAAGA+AGG | 0.512654 | 7:-8913627 | MsG0780036498.01.T01:intron |
TGTCATGTAATGGCTGCATC+CGG | 0.516741 | 7:+8915010 | None:intergenic |
AAGATTTGGTTTCTTGACTC+CGG | 0.516770 | 7:-8915029 | MsG0780036498.01.T01:CDS |
CTAGGAATCCTATTGCTCCT+GGG | 0.518891 | 7:-8912710 | MsG0780036498.01.T01:CDS |
CTTGTTAGAAAGGTTTGGCA+TGG | 0.522884 | 7:-8912747 | MsG0780036498.01.T01:intron |
GTGGGGAAGGGATTGTGTCA+TGG | 0.525529 | 7:-8914531 | MsG0780036498.01.T01:CDS |
CAGAGGCTCTAGAAGAAGGA+AGG | 0.528528 | 7:-8913623 | MsG0780036498.01.T01:CDS |
GAATTTAACATGTCAGACCT+TGG | 0.529086 | 7:-8912850 | MsG0780036498.01.T01:CDS |
AAGATTTCGTGAGTGGAGAA+GGG | 0.532474 | 7:-8913575 | MsG0780036498.01.T01:CDS |
GTTCTCGACTACAACCATCT+TGG | 0.546271 | 7:+8914920 | None:intergenic |
ATGGAGAAAAGTATTTGTCT+AGG | 0.550584 | 7:-8912728 | MsG0780036498.01.T01:CDS |
TTAGTTCAGGTGCAGTCTCA+TGG | 0.552611 | 7:-8912375 | MsG0780036498.01.T01:intron |
TTCCATCATTGGAAAGATCA+CGG | 0.558437 | 7:+8912120 | None:intergenic |
TATCAACAATCTGTCAAGCT+CGG | 0.558676 | 7:-8914951 | MsG0780036498.01.T01:CDS |
AAGTTGATTAAAGATGAAAA+TGG | 0.558684 | 7:-8912684 | MsG0780036498.01.T01:CDS |
GACACCAAGCAAGTGGGGAA+GGG | 0.560438 | 7:-8914543 | MsG0780036498.01.T01:CDS |
GGATGCAGCCATTACATGAC+AGG | 0.561165 | 7:-8915008 | MsG0780036498.01.T01:CDS |
TTGCTACGACCAAGAAGCAC+AGG | 0.562398 | 7:+8912172 | None:intergenic |
AACACTTTGACAAGCACAGA+AGG | 0.563304 | 7:+8912291 | None:intergenic |
AAGATGGTAACAGGGCTGCC+GGG | 0.571263 | 7:-8914572 | MsG0780036498.01.T01:CDS |
AGAGGCTCTAGAAGAAGGAA+GGG | 0.575607 | 7:-8913622 | MsG0780036498.01.T01:CDS |
CTGTCAAAAGTGAGAAATGG+AGG | 0.578385 | 7:-8913480 | MsG0780036498.01.T01:CDS |
TATGAATTACTTCAACTCCA+AGG | 0.580636 | 7:+8912812 | None:intergenic |
AGATGAAAATGGTGTGAAGG+TGG | 0.589639 | 7:-8912673 | MsG0780036498.01.T01:CDS |
GCTCGGAAACAACTCCAAGA+TGG | 0.594097 | 7:-8914934 | MsG0780036498.01.T01:CDS |
GAATAAGGACACCAAGCAAG+TGG | 0.594579 | 7:-8914550 | MsG0780036498.01.T01:CDS |
TGGATGAAAGATTTCGTGAG+TGG | 0.601121 | 7:-8913582 | MsG0780036498.01.T01:CDS |
GAGTTGACTATATTACCGGC+AGG | 0.602845 | 7:-8913409 | MsG0780036498.01.T01:CDS |
CATCTAAGAAGATGGTAACA+GGG | 0.604563 | 7:-8914580 | MsG0780036498.01.T01:intron |
GGAAATAGTGCATCTTTCCA+AGG | 0.605011 | 7:+8912833 | None:intergenic |
AATAGAGAATAATAATACTT+GGG | 0.608223 | 7:-8913431 | MsG0780036498.01.T01:CDS |
TCTTTAATCAACTTGCACCC+AGG | 0.612167 | 7:+8912693 | None:intergenic |
GTTGTCGATAAAGTAACCAC+CGG | 0.615397 | 7:+8912337 | None:intergenic |
AAGATGGTTGTAGTCGAGAA+CGG | 0.616266 | 7:-8914918 | MsG0780036498.01.T01:intron |
ATACATCAGATCAGGTCTTG+TGG | 0.619762 | 7:+8912602 | None:intergenic |
AAATCTTTCATCCATACTGG+TGG | 0.627448 | 7:+8913591 | None:intergenic |
GATTGCAATGAATAATGAGA+TGG | 0.628627 | 7:-8913458 | MsG0780036498.01.T01:CDS |
AATAAGGACACCAAGCAAGT+GGG | 0.628768 | 7:-8914549 | MsG0780036498.01.T01:CDS |
TAAAGATGAAAATGGTGTGA+AGG | 0.631188 | 7:-8912676 | MsG0780036498.01.T01:CDS |
AAAGTTGAATGAGAATGGAG+AGG | 0.657929 | 7:-8913350 | MsG0780036498.01.T01:intron |
ATAAGGACACCAAGCAAGTG+GGG | 0.663725 | 7:-8914548 | MsG0780036498.01.T01:CDS |
TGCTACGACCAAGAAGCACA+GGG | 0.672177 | 7:+8912173 | None:intergenic |
ACATGACAGGAAACAAACAG+TGG | 0.749395 | 7:-8914995 | MsG0780036498.01.T01:CDS |
TCATTGGAAAGATCACGGAG+AGG | 0.758440 | 7:+8912125 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | CATTTAAAAATTTAAAATCT+TGG | - | Chr7:8912916-8912935 | MsG0780036498.01.T01:intron | 10.0% |
!! | AATAGAGAATAATAATACTT+GGG | - | Chr7:8913796-8913815 | MsG0780036498.01.T01:intron | 15.0% |
!! | AAAAAACAACTTGATTAACT+TGG | - | Chr7:8912398-8912417 | MsG0780036498.01.T01:intron | 20.0% |
!! | AAAATGAATTGAATCTTTAG+AGG | + | Chr7:8913001-8913020 | None:intergenic | 20.0% |
!! | AAATCAGACTATTATGAATA+TGG | - | Chr7:8913094-8913113 | MsG0780036498.01.T01:intron | 20.0% |
!! | AGAAATCAAGTATATTAGTT+GGG | - | Chr7:8913482-8913501 | MsG0780036498.01.T01:CDS | 20.0% |
!! | CAATAGAGAATAATAATACT+TGG | - | Chr7:8913795-8913814 | MsG0780036498.01.T01:intron | 20.0% |
!! | GTAATGATGAAATATGTTTA+AGG | - | Chr7:8914331-8914350 | MsG0780036498.01.T01:intron | 20.0% |
!!! | AAGTTGATTAAAGATGAAAA+TGG | - | Chr7:8914543-8914562 | MsG0780036498.01.T01:CDS | 20.0% |
!!! | ACTTTAAAATAATGAACTGA+TGG | + | Chr7:8913258-8913277 | None:intergenic | 20.0% |
!!! | GTTCATTATTTTAAAGTCTT+TGG | - | Chr7:8913261-8913280 | MsG0780036498.01.T01:intron | 20.0% |
!!! | TTGTTTTAAAAATCCATTTG+AGG | + | Chr7:8913859-8913878 | None:intergenic | 20.0% |
! | AAAACAAAGTTGAATGAGAA+TGG | - | Chr7:8913872-8913891 | MsG0780036498.01.T01:intron | 25.0% |
! | AACTAAGCATAAAACATATC+CGG | + | Chr7:8914838-8914857 | None:intergenic | 25.0% |
! | AAGAAAAACGAAAATTCAGA+AGG | - | Chr7:8913545-8913564 | MsG0780036498.01.T01:CDS | 25.0% |
! | AATATTAGATTGCATGCTAA+TGG | - | Chr7:8912333-8912352 | MsG0780036498.01.T01:CDS | 25.0% |
! | ACAAAGTATAAGCAAATTGT+TGG | - | Chr7:8914582-8914601 | MsG0780036498.01.T01:intron | 25.0% |
! | AGTTGAAGTAATTCATAATG+AGG | - | Chr7:8914421-8914440 | MsG0780036498.01.T01:intron | 25.0% |
! | ATCAAAAAGTCTATATGCTT+TGG | + | Chr7:8913378-8913397 | None:intergenic | 25.0% |
! | ATGTATTAAGTCTAATTAGC+AGG | - | Chr7:8914646-8914665 | MsG0780036498.01.T01:intron | 25.0% |
! | ATTTGGGGATTATGTATAAA+GGG | - | Chr7:8914741-8914760 | MsG0780036498.01.T01:intron | 25.0% |
! | CAGAAATCAAGTATATTAGT+TGG | - | Chr7:8913481-8913500 | MsG0780036498.01.T01:CDS | 25.0% |
! | GAAATCAAGTATATTAGTTG+GGG | - | Chr7:8913483-8913502 | MsG0780036498.01.T01:CDS | 25.0% |
! | GAAGGAATTTATATTTGTCA+AGG | - | Chr7:8914443-8914462 | MsG0780036498.01.T01:intron | 25.0% |
! | GTTTAAGAAATCTATGGAAA+AGG | - | Chr7:8914355-8914374 | MsG0780036498.01.T01:intron | 25.0% |
! | TAAGGAGTTTAAGAAATCTA+TGG | - | Chr7:8914349-8914368 | MsG0780036498.01.T01:intron | 25.0% |
! | TATTTGGGGATTATGTATAA+AGG | - | Chr7:8914740-8914759 | MsG0780036498.01.T01:intron | 25.0% |
! | TGTGATGATTTAATATTCAC+TGG | - | Chr7:8914309-8914328 | MsG0780036498.01.T01:intron | 25.0% |
!! | ATATGTTTTATGCTTAGTTC+AGG | - | Chr7:8914839-8914858 | MsG0780036498.01.T01:intron | 25.0% |
!!! | ATCAAGTTGTTTTTTAACTC+AGG | + | Chr7:8912393-8912412 | None:intergenic | 25.0% |
AAAAACGAAAATTCAGAAGG+TGG | - | Chr7:8913548-8913567 | MsG0780036498.01.T01:CDS | 30.0% | |
AAACTCTTCATCTAAGAAGA+TGG | - | Chr7:8912639-8912658 | MsG0780036498.01.T01:CDS | 30.0% | |
AAAGGATACTCTCAACAATA+TGG | - | Chr7:8913928-8913947 | MsG0780036498.01.T01:intron | 30.0% | |
AAATCCTTCCTTTGTGAAAT+AGG | + | Chr7:8914216-8914235 | None:intergenic | 30.0% | |
AATCTTGGTTGAGAAAGAAT+AGG | - | Chr7:8912931-8912950 | MsG0780036498.01.T01:intron | 30.0% | |
ACGATTACAGTAGAAAGATT+GGG | - | Chr7:8912857-8912876 | MsG0780036498.01.T01:CDS | 30.0% | |
ATATATTAGAGTGCACCAAT+TGG | + | Chr7:8912780-8912799 | None:intergenic | 30.0% | |
ATCACACATTGAAAGATCTT+GGG | + | Chr7:8913335-8913354 | None:intergenic | 30.0% | |
ATCTCAATGGCACAATTATT+TGG | - | Chr7:8914724-8914743 | MsG0780036498.01.T01:intron | 30.0% | |
ATCTTGGTTGAGAAAGAATA+GGG | - | Chr7:8912932-8912951 | MsG0780036498.01.T01:intron | 30.0% | |
ATCTTTCAATGTGTGATGTT+AGG | - | Chr7:8913338-8913357 | MsG0780036498.01.T01:intron | 30.0% | |
CTTAATACATACATCAGATC+AGG | + | Chr7:8914636-8914655 | None:intergenic | 30.0% | |
GAAGTAATTCATAATGAGGA+AGG | - | Chr7:8914425-8914444 | MsG0780036498.01.T01:intron | 30.0% | |
GATTGCAATGAATAATGAGA+TGG | - | Chr7:8913769-8913788 | MsG0780036498.01.T01:intron | 30.0% | |
TAAAGATGAAAATGGTGTGA+AGG | - | Chr7:8914551-8914570 | MsG0780036498.01.T01:CDS | 30.0% | |
TATGAATTACTTCAACTCCA+AGG | + | Chr7:8914418-8914437 | None:intergenic | 30.0% | |
TCTCAATGGCACAATTATTT+GGG | - | Chr7:8914725-8914744 | MsG0780036498.01.T01:intron | 30.0% | |
TCTTTCAATGTGTGATGTTA+GGG | - | Chr7:8913339-8913358 | MsG0780036498.01.T01:intron | 30.0% | |
TTATGGCCATCTAAATTTCA+AGG | - | Chr7:8912611-8912630 | MsG0780036498.01.T01:CDS | 30.0% | |
TTCACTCAACTTCACAAATA+AGG | + | Chr7:8914261-8914280 | None:intergenic | 30.0% | |
TTCAGTCCTTGAAATTTAGA+TGG | + | Chr7:8912620-8912639 | None:intergenic | 30.0% | |
! | AATTCATTTTGCAGCTTACA+TGG | - | Chr7:8913011-8913030 | MsG0780036498.01.T01:intron | 30.0% |
! | GAAGGTGTATAAATTGAGAA+GGG | - | Chr7:8914139-8914158 | MsG0780036498.01.T01:intron | 30.0% |
!! | AGATGATAGAAAAGTACTTC+CGG | - | Chr7:8914816-8914835 | MsG0780036498.01.T01:intron | 30.0% |
!! | ATATTGTTGAGAGTATCCTT+TGG | + | Chr7:8913929-8913948 | None:intergenic | 30.0% |
!! | ATGGAGAAAAGTATTTGTCT+AGG | - | Chr7:8914499-8914518 | MsG0780036498.01.T01:intron | 30.0% |
!! | ATGTAACTGACTTGTTAGAA+AGG | - | Chr7:8914470-8914489 | MsG0780036498.01.T01:intron | 30.0% |
!! | GAGTTTCTGTTGATTCAAAA+TGG | - | Chr7:8912438-8912457 | MsG0780036498.01.T01:intron | 30.0% |
!! | TTTTGAAGAAAATGAGTGCT+GGG | - | Chr7:8913435-8913454 | MsG0780036498.01.T01:CDS | 30.0% |
!! | TTTTTGAAGAAAATGAGTGC+TGG | - | Chr7:8913434-8913453 | MsG0780036498.01.T01:CDS | 30.0% |
AAAGTTGAATGAGAATGGAG+AGG | - | Chr7:8913877-8913896 | MsG0780036498.01.T01:intron | 35.0% | |
AAATCTTTCATCCATACTGG+TGG | + | Chr7:8913639-8913658 | None:intergenic | 35.0% | |
AACAGAAGAAATGCTCCTAA+TGG | - | Chr7:8912143-8912162 | MsG0780036498.01.T01:CDS | 35.0% | |
AAGCTGTCAAAAGTGAGAAA+TGG | - | Chr7:8913744-8913763 | MsG0780036498.01.T01:intron | 35.0% | |
ACAAATAAGGTGTGCTCATA+TGG | + | Chr7:8914248-8914267 | None:intergenic | 35.0% | |
ACGAAATCTTTCATCCATAC+TGG | + | Chr7:8913642-8913661 | None:intergenic | 35.0% | |
ACTTGGACAATTGATAGAGA+AGG | - | Chr7:8912415-8912434 | MsG0780036498.01.T01:intron | 35.0% | |
AGCACAAGTTTATGTGAAGA+AGG | - | Chr7:8914106-8914125 | MsG0780036498.01.T01:intron | 35.0% | |
CATCACACATTGAAAGATCT+TGG | + | Chr7:8913336-8913355 | None:intergenic | 35.0% | |
CATCTAAGAAGATGGTAACA+GGG | - | Chr7:8912647-8912666 | MsG0780036498.01.T01:CDS | 35.0% | |
CATGTTGAAACTTGAGACAT+CGG | + | Chr7:8912547-8912566 | None:intergenic | 35.0% | |
CATTGAAGCCTATTTCACAA+AGG | - | Chr7:8914205-8914224 | MsG0780036498.01.T01:intron | 35.0% | |
CTCAATGGCACAATTATTTG+GGG | - | Chr7:8914726-8914745 | MsG0780036498.01.T01:intron | 35.0% | |
CTTGGACAATTGATAGAGAA+GGG | - | Chr7:8912416-8912435 | MsG0780036498.01.T01:intron | 35.0% | |
CTTTCAATGTGTGATGTTAG+GGG | - | Chr7:8913340-8913359 | MsG0780036498.01.T01:intron | 35.0% | |
CTTTGCTAATCACAATACGT+TGG | + | Chr7:8913408-8913427 | None:intergenic | 35.0% | |
GAATTTAACATGTCAGACCT+TGG | - | Chr7:8914377-8914396 | MsG0780036498.01.T01:intron | 35.0% | |
GACGATTACAGTAGAAAGAT+TGG | - | Chr7:8912856-8912875 | MsG0780036498.01.T01:CDS | 35.0% | |
GCACAAGTTTATGTGAAGAA+GGG | - | Chr7:8914107-8914126 | MsG0780036498.01.T01:intron | 35.0% | |
GTTTGTTTCCTGTCATGTAA+TGG | + | Chr7:8912230-8912249 | None:intergenic | 35.0% | |
TACACAGATAGTGATTATGC+AGG | - | Chr7:8914787-8914806 | MsG0780036498.01.T01:intron | 35.0% | |
TATCAACAATCTGTCAAGCT+CGG | - | Chr7:8912276-8912295 | MsG0780036498.01.T01:CDS | 35.0% | |
TATGCCAAGTGAAAAGTTTG+TGG | - | Chr7:8912737-8912756 | MsG0780036498.01.T01:CDS | 35.0% | |
TCAGAAGGTGGAGAAAAAAT+GGG | - | Chr7:8913560-8913579 | MsG0780036498.01.T01:CDS | 35.0% | |
TCATCTAAGAAGATGGTAAC+AGG | - | Chr7:8912646-8912665 | MsG0780036498.01.T01:CDS | 35.0% | |
TCGGAAGATGAAAACATCTT+TGG | - | Chr7:8912580-8912599 | MsG0780036498.01.T01:intron | 35.0% | |
TCTTAAAGTCATTCATCCAG+AGG | - | Chr7:8913587-8913606 | MsG0780036498.01.T01:CDS | 35.0% | |
TCTTGGTTGAGAAAGAATAG+GGG | - | Chr7:8912933-8912952 | MsG0780036498.01.T01:intron | 35.0% | |
TGGTGCACTCTAATATATGT+GGG | - | Chr7:8912782-8912801 | MsG0780036498.01.T01:intron | 35.0% | |
TTCAGAAGGTGGAGAAAAAA+TGG | - | Chr7:8913559-8913578 | MsG0780036498.01.T01:CDS | 35.0% | |
TTCCATCATTGGAAAGATCA+CGG | + | Chr7:8915110-8915129 | None:intergenic | 35.0% | |
TTGGGAGTTGACTATATTAC+CGG | - | Chr7:8913814-8913833 | MsG0780036498.01.T01:intron | 35.0% | |
TTGGTGCACTCTAATATATG+TGG | - | Chr7:8912781-8912800 | MsG0780036498.01.T01:intron | 35.0% | |
TTGTGAAATAGGCTTCAATG+CGG | + | Chr7:8914205-8914224 | None:intergenic | 35.0% | |
TTTGTGAAGTTGAGTGAAAG+AGG | - | Chr7:8914263-8914282 | MsG0780036498.01.T01:intron | 35.0% | |
! | AAGATTTGGTTTCTTGACTC+CGG | - | Chr7:8912198-8912217 | MsG0780036498.01.T01:CDS | 35.0% |
! | AAGCGCTTTTAACATCTAAC+TGG | + | Chr7:8914047-8914066 | None:intergenic | 35.0% |
! | AGAGTACTCAGATATCTCAA+TGG | - | Chr7:8914711-8914730 | MsG0780036498.01.T01:intron | 35.0% |
! | CAAAAACTATTGGCCTCAAA+TGG | - | Chr7:8913843-8913862 | MsG0780036498.01.T01:intron | 35.0% |
! | CGAAGGTGTATAAATTGAGA+AGG | - | Chr7:8914138-8914157 | MsG0780036498.01.T01:intron | 35.0% |
! | CTTTTTCCACTACTTGATGA+GGG | + | Chr7:8912817-8912836 | None:intergenic | 35.0% |
! | GCTTTTACACCTCAACAAAA+CGG | - | Chr7:8913056-8913075 | MsG0780036498.01.T01:intron | 35.0% |
! | GTACACATTCCATCCTTTTT+GGG | + | Chr7:8914025-8914044 | None:intergenic | 35.0% |
!! | AAATTGAGAAGGGCATTGTA+TGG | - | Chr7:8914149-8914168 | MsG0780036498.01.T01:intron | 35.0% |
!! | AATCACAATACGTTGGTAGT+TGG | + | Chr7:8913401-8913420 | None:intergenic | 35.0% |
!! | ACTGACTTGTTAGAAAGGTT+TGG | - | Chr7:8914475-8914494 | MsG0780036498.01.T01:intron | 35.0% |
!! | ATGAGAAGAGTGCTAAGATT+TGG | - | Chr7:8912184-8912203 | MsG0780036498.01.T01:CDS | 35.0% |
!! | TTCGTTTTTCTTTCACTGTG+AGG | + | Chr7:8913537-8913556 | None:intergenic | 35.0% |
AAACTTGGTCACACTCAATC+TGG | - | Chr7:8914980-8914999 | MsG0780036498.01.T01:CDS | 40.0% | |
AAAGATTTCGTGAGTGGAGA+AGG | - | Chr7:8913651-8913670 | MsG0780036498.01.T01:intron | 40.0% | |
AACACTTTGACAAGCACAGA+AGG | + | Chr7:8914939-8914958 | None:intergenic | 40.0% | |
AACATGCTTCAAGACTGTCT+CGG | - | Chr7:8912561-8912580 | MsG0780036498.01.T01:intron | 40.0% | |
AAGAGCGATTACCATTCGAA+TGG | + | Chr7:8913998-8914017 | None:intergenic | 40.0% | |
AAGATGGTTGTAGTCGAGAA+CGG | - | Chr7:8912309-8912328 | MsG0780036498.01.T01:CDS | 40.0% | |
AAGATTTCGTGAGTGGAGAA+GGG | - | Chr7:8913652-8913671 | MsG0780036498.01.T01:intron | 40.0% | |
AATAAGGACACCAAGCAAGT+GGG | - | Chr7:8912678-8912697 | MsG0780036498.01.T01:CDS | 40.0% | |
ACATGACAGGAAACAAACAG+TGG | - | Chr7:8912232-8912251 | MsG0780036498.01.T01:CDS | 40.0% | |
AGATGAAAATGGTGTGAAGG+TGG | - | Chr7:8914554-8914573 | MsG0780036498.01.T01:CDS | 40.0% | |
AGCTACACACAAACTCCAAT+TGG | - | Chr7:8912762-8912781 | MsG0780036498.01.T01:intron | 40.0% | |
ATACATCAGATCAGGTCTTG+TGG | + | Chr7:8914628-8914647 | None:intergenic | 40.0% | |
ATGGTCGTCTAAAAAGCAAC+CGG | - | Chr7:8914871-8914890 | MsG0780036498.01.T01:intron | 40.0% | |
ATTTGCACCAGTGGCTATAT+AGG | - | Chr7:8913969-8913988 | MsG0780036498.01.T01:intron | 40.0% | |
CGTTGCTATCACTCAAATGA+TGG | - | Chr7:8912468-8912487 | MsG0780036498.01.T01:intron | 40.0% | |
CTGTCAAAAGTGAGAAATGG+AGG | - | Chr7:8913747-8913766 | MsG0780036498.01.T01:intron | 40.0% | |
CTTGTTAGAAAGGTTTGGCA+TGG | - | Chr7:8914480-8914499 | MsG0780036498.01.T01:intron | 40.0% | |
GAAGCCTATTTCACAAAGGA+AGG | - | Chr7:8914209-8914228 | MsG0780036498.01.T01:intron | 40.0% | |
GGAAAGATGCACTATTTCCT+TGG | - | Chr7:8914398-8914417 | MsG0780036498.01.T01:intron | 40.0% | |
GGAAATAGTGCATCTTTCCA+AGG | + | Chr7:8914397-8914416 | None:intergenic | 40.0% | |
GGGGATTATGTATAAAGGGA+TGG | - | Chr7:8914745-8914764 | MsG0780036498.01.T01:intron | 40.0% | |
GTTGTCGATAAAGTAACCAC+CGG | + | Chr7:8914893-8914912 | None:intergenic | 40.0% | |
TATCTTTCACTGCCAAGGTT+GGG | + | Chr7:8913205-8913224 | None:intergenic | 40.0% | |
TCTTTAATCAACTTGCACCC+AGG | + | Chr7:8914537-8914556 | None:intergenic | 40.0% | |
TGGATGAAAGATTTCGTGAG+TGG | - | Chr7:8913645-8913664 | MsG0780036498.01.T01:intron | 40.0% | |
TGTCTTATCTTTCACTGCCA+AGG | + | Chr7:8913210-8913229 | None:intergenic | 40.0% | |
TTATCTTTCACTGCCAAGGT+TGG | + | Chr7:8913206-8913225 | None:intergenic | 40.0% | |
TTTGCACCAGTGGCTATATA+GGG | - | Chr7:8913970-8913989 | MsG0780036498.01.T01:intron | 40.0% | |
! | ATGGAGAGGTTGAAAGTACA+AGG | - | Chr7:8913891-8913910 | MsG0780036498.01.T01:intron | 40.0% |
! | CATTGAAGTATTTGCACCAG+TGG | - | Chr7:8913960-8913979 | MsG0780036498.01.T01:intron | 40.0% |
! | CCTCATCAAGTAGTGGAAAA+AGG | - | Chr7:8912815-8912834 | MsG0780036498.01.T01:intron | 40.0% |
! | CCTTTTTCCACTACTTGATG+AGG | + | Chr7:8912818-8912837 | None:intergenic | 40.0% |
! | CTCTCCACAAACTTTTCACT+TGG | + | Chr7:8912744-8912763 | None:intergenic | 40.0% |
! | GGTACACATTCCATCCTTTT+TGG | + | Chr7:8914026-8914045 | None:intergenic | 40.0% |
! | TATATAGGGCACCATTCGAA+TGG | - | Chr7:8913984-8914003 | MsG0780036498.01.T01:intron | 40.0% |
! | TCTGTGCTTGTCAAAGTGTT+TGG | - | Chr7:8914939-8914958 | MsG0780036498.01.T01:CDS | 40.0% |
!! | AAGAAAATGAGTGCTGGGAT+TGG | - | Chr7:8913440-8913459 | MsG0780036498.01.T01:CDS | 40.0% |
!! | AAGCTTTTTCTCTTGGCATC+TGG | + | Chr7:8913309-8913328 | None:intergenic | 40.0% |
!! | AGAAAATGAGTGCTGGGATT+GGG | - | Chr7:8913441-8913460 | MsG0780036498.01.T01:CDS | 40.0% |
!! | GTTAAAAGCGCTTTCTTGCA+CGG | - | Chr7:8914054-8914073 | MsG0780036498.01.T01:intron | 40.0% |
!! | TGGGATCAAGCTTTTTCTCT+TGG | + | Chr7:8913316-8913335 | None:intergenic | 40.0% |
AACATGTCCCGAAGTTCTTG+TGG | - | Chr7:8913138-8913157 | MsG0780036498.01.T01:intron | 45.0% | |
AAGGCTAGACTTGTAGCCAA+AGG | - | Chr7:8913910-8913929 | MsG0780036498.01.T01:intron | 45.0% | |
ACATGTCCCGAAGTTCTTGT+GGG | - | Chr7:8913139-8913158 | MsG0780036498.01.T01:intron | 45.0% | |
AGATAAGACACCTGAACGTG+TGG | - | Chr7:8913220-8913239 | MsG0780036498.01.T01:intron | 45.0% | |
ATAAGGACACCAAGCAAGTG+GGG | - | Chr7:8912679-8912698 | MsG0780036498.01.T01:CDS | 45.0% | |
ATCACACCCTCATCAAGTAG+TGG | - | Chr7:8912808-8912827 | MsG0780036498.01.T01:intron | 45.0% | |
CATCTTTGGCACTGTCGTTA+TGG | - | Chr7:8912594-8912613 | MsG0780036498.01.T01:intron | 45.0% | |
CTAGGAATCCTATTGCTCCT+GGG | - | Chr7:8914517-8914536 | MsG0780036498.01.T01:intron | 45.0% | |
CTCCGTGATCTTTCCAATGA+TGG | - | Chr7:8915105-8915124 | MsG0780036498.01.T01:CDS | 45.0% | |
GAATAAGGACACCAAGCAAG+TGG | - | Chr7:8912677-8912696 | MsG0780036498.01.T01:CDS | 45.0% | |
GAGTTGACTATATTACCGGC+AGG | - | Chr7:8913818-8913837 | MsG0780036498.01.T01:intron | 45.0% | |
GCATGCATGTGTAACTCAGT+TGG | + | Chr7:8914684-8914703 | None:intergenic | 45.0% | |
GGGGTGAAAGTGAAGAAGAA+AGG | - | Chr7:8913502-8913521 | MsG0780036498.01.T01:CDS | 45.0% | |
GTTCTCGACTACAACCATCT+TGG | + | Chr7:8912310-8912329 | None:intergenic | 45.0% | |
TAATGTCACTCCACACGTTC+AGG | + | Chr7:8913233-8913252 | None:intergenic | 45.0% | |
TCAAAGAACCCTGTGCTTCT+TGG | - | Chr7:8915046-8915065 | MsG0780036498.01.T01:CDS | 45.0% | |
TCAGTGCCTTCGAACAGATA+GGG | - | Chr7:8912963-8912982 | MsG0780036498.01.T01:intron | 45.0% | |
TCATTGGAAAGATCACGGAG+AGG | + | Chr7:8915105-8915124 | None:intergenic | 45.0% | |
TCTAGGAATCCTATTGCTCC+TGG | - | Chr7:8914516-8914535 | MsG0780036498.01.T01:intron | 45.0% | |
TGTCATGTAATGGCTGCATC+CGG | + | Chr7:8912220-8912239 | None:intergenic | 45.0% | |
TTAGTTCAGGTGCAGTCTCA+TGG | - | Chr7:8914852-8914871 | MsG0780036498.01.T01:intron | 45.0% | |
TTCAGTGCCTTCGAACAGAT+AGG | - | Chr7:8912962-8912981 | MsG0780036498.01.T01:intron | 45.0% | |
! | CCAATAGTTTTTGCACCTGC+CGG | + | Chr7:8913836-8913855 | None:intergenic | 45.0% |
! | GGCATTGTATGGCCTTAAAC+AGG | - | Chr7:8914160-8914179 | MsG0780036498.01.T01:intron | 45.0% |
!! | AGAGGCTCTAGAAGAAGGAA+GGG | - | Chr7:8913605-8913624 | MsG0780036498.01.T01:CDS | 45.0% |
!! | TTGCTTGGTGTCCTTATTCC+CGG | + | Chr7:8912676-8912695 | None:intergenic | 45.0% |
AACAAAACGGAGTCGCGGAA+AGG | - | Chr7:8913069-8913088 | MsG0780036498.01.T01:intron | 50.0% | |
AACTTGCACCCAGGAGCAAT+AGG | + | Chr7:8914528-8914547 | None:intergenic | 50.0% | |
AAGGGATGGAAGTGAGAAGC+TGG | - | Chr7:8914759-8914778 | MsG0780036498.01.T01:intron | 50.0% | |
ACCTCAACAAAACGGAGTCG+CGG | - | Chr7:8913064-8913083 | MsG0780036498.01.T01:intron | 50.0% | |
ATCGCTCTTGCTGCCCAAAA+AGG | - | Chr7:8914009-8914028 | MsG0780036498.01.T01:intron | 50.0% | |
ATGCTCGTGGTGCCTGTTTA+AGG | + | Chr7:8914175-8914194 | None:intergenic | 50.0% | |
ATGGTGCCCTATATAGCCAC+TGG | + | Chr7:8913979-8913998 | None:intergenic | 50.0% | |
CACACTCGTCATGAGCCATT+AGG | + | Chr7:8912161-8912180 | None:intergenic | 50.0% | |
CAGTGCCTTCGAACAGATAG+GGG | - | Chr7:8912964-8912983 | MsG0780036498.01.T01:intron | 50.0% | |
CCAAGGTTGGGCTTCTATTC+AGG | + | Chr7:8913193-8913212 | None:intergenic | 50.0% | |
CCGGCAGGTGCAAAAACTAT+TGG | - | Chr7:8913833-8913852 | MsG0780036498.01.T01:intron | 50.0% | |
CCTGAATAGAAGCCCAACCT+TGG | - | Chr7:8913190-8913209 | MsG0780036498.01.T01:intron | 50.0% | |
CGAAGAGTTCGCGAGAAACT+TGG | - | Chr7:8914965-8914984 | MsG0780036498.01.T01:CDS | 50.0% | |
CTCTTGCTGCCCAAAAAGGA+TGG | - | Chr7:8914013-8914032 | MsG0780036498.01.T01:intron | 50.0% | |
GAAAGATCACGGAGAGGAAG+TGG | + | Chr7:8915099-8915118 | None:intergenic | 50.0% | |
GAAGAAGGGTGATGAGTCGA+AGG | - | Chr7:8914121-8914140 | MsG0780036498.01.T01:intron | 50.0% | |
GCTCGGAAACAACTCCAAGA+TGG | - | Chr7:8912293-8912312 | MsG0780036498.01.T01:CDS | 50.0% | |
GGATGCAGCCATTACATGAC+AGG | - | Chr7:8912219-8912238 | MsG0780036498.01.T01:CDS | 50.0% | |
GTCGTCTAAAAAGCAACCGG+TGG | - | Chr7:8914874-8914893 | MsG0780036498.01.T01:intron | 50.0% | |
GTGGGCAGAGGCAGTAAATT+AGG | - | Chr7:8913157-8913176 | MsG0780036498.01.T01:intron | 50.0% | |
TGGGGAAGGGATTGTGTCAT+GGG | - | Chr7:8912697-8912716 | MsG0780036498.01.T01:CDS | 50.0% | |
TTAAACAGGCACCACGAGCA+TGG | - | Chr7:8914174-8914193 | MsG0780036498.01.T01:intron | 50.0% | |
! | TGCTACGACCAAGAAGCACA+GGG | + | Chr7:8915057-8915076 | None:intergenic | 50.0% |
! | TTGCTACGACCAAGAAGCAC+AGG | + | Chr7:8915058-8915077 | None:intergenic | 50.0% |
!! | CAGAGGCTCTAGAAGAAGGA+AGG | - | Chr7:8913604-8913623 | MsG0780036498.01.T01:CDS | 50.0% |
!! | CATCCAGAGGCTCTAGAAGA+AGG | - | Chr7:8913600-8913619 | MsG0780036498.01.T01:CDS | 50.0% |
!! | CTTCCTTCTTCTAGAGCCTC+TGG | + | Chr7:8913606-8913625 | None:intergenic | 50.0% |
AAGATGGTAACAGGGCTGCC+GGG | - | Chr7:8912655-8912674 | MsG0780036498.01.T01:CDS | 55.0% | |
CAATCCCTTCCCCACTTGCT+TGG | + | Chr7:8912691-8912710 | None:intergenic | 55.0% | |
CCTCTGCCCACAAGAACTTC+GGG | + | Chr7:8913148-8913167 | None:intergenic | 55.0% | |
CTCCTCCCCTATCTGTTCGA+AGG | + | Chr7:8912972-8912991 | None:intergenic | 55.0% | |
GAAGATGGTAACAGGGCTGC+CGG | - | Chr7:8912654-8912673 | MsG0780036498.01.T01:CDS | 55.0% | |
GACACCAAGCAAGTGGGGAA+GGG | - | Chr7:8912684-8912703 | MsG0780036498.01.T01:CDS | 55.0% | |
GCCTCTGCCCACAAGAACTT+CGG | + | Chr7:8913149-8913168 | None:intergenic | 55.0% | |
GGATGGAAGTGAGAAGCTGG+AGG | - | Chr7:8914762-8914781 | MsG0780036498.01.T01:intron | 55.0% | |
GGGTGAGACAACCACCAGTA+TGG | - | Chr7:8913625-8913644 | MsG0780036498.01.T01:intron | 55.0% | |
GTGGGGAAGGGATTGTGTCA+TGG | - | Chr7:8912696-8912715 | MsG0780036498.01.T01:CDS | 55.0% | |
TAACAGGGCTGCCGGGAATA+AGG | - | Chr7:8912662-8912681 | MsG0780036498.01.T01:CDS | 55.0% | |
TGCCTTCGAACAGATAGGGG+AGG | - | Chr7:8912967-8912986 | MsG0780036498.01.T01:intron | 55.0% | |
!! | TCCGCGACTCCGTTTTGTTG+AGG | + | Chr7:8913068-8913087 | None:intergenic | 55.0% |
ATGCGGCTGTACCATGCTCG+TGG | + | Chr7:8914188-8914207 | None:intergenic | 60.0% | |
CCCGAAGTTCTTGTGGGCAG+AGG | - | Chr7:8913145-8913164 | MsG0780036498.01.T01:intron | 60.0% | |
GGACACCAAGCAAGTGGGGA+AGG | - | Chr7:8912683-8912702 | MsG0780036498.01.T01:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr7 | gene | 8912114 | 8915135 | 8912114 | ID=MsG0780036498.01;Name=MsG0780036498.01 |
Chr7 | mRNA | 8912114 | 8915135 | 8912114 | ID=MsG0780036498.01.T01;Parent=MsG0780036498.01;Name=MsG0780036498.01.T01;_AED=0.41;_eAED=0.42;_QI=0|0|0|1|1|1|6|0|359 |
Chr7 | exon | 8914919 | 8915135 | 8914919 | ID=MsG0780036498.01.T01:exon:1780;Parent=MsG0780036498.01.T01 |
Chr7 | exon | 8914531 | 8914594 | 8914531 | ID=MsG0780036498.01.T01:exon:1779;Parent=MsG0780036498.01.T01 |
Chr7 | exon | 8913351 | 8913642 | 8913351 | ID=MsG0780036498.01.T01:exon:1778;Parent=MsG0780036498.01.T01 |
Chr7 | exon | 8912822 | 8912896 | 8912822 | ID=MsG0780036498.01.T01:exon:1777;Parent=MsG0780036498.01.T01 |
Chr7 | exon | 8912606 | 8912757 | 8912606 | ID=MsG0780036498.01.T01:exon:1776;Parent=MsG0780036498.01.T01 |
Chr7 | exon | 8912114 | 8912393 | 8912114 | ID=MsG0780036498.01.T01:exon:1775;Parent=MsG0780036498.01.T01 |
Chr7 | CDS | 8914919 | 8915135 | 8914919 | ID=MsG0780036498.01.T01:cds;Parent=MsG0780036498.01.T01 |
Chr7 | CDS | 8914531 | 8914594 | 8914531 | ID=MsG0780036498.01.T01:cds;Parent=MsG0780036498.01.T01 |
Chr7 | CDS | 8913351 | 8913642 | 8913351 | ID=MsG0780036498.01.T01:cds;Parent=MsG0780036498.01.T01 |
Chr7 | CDS | 8912822 | 8912896 | 8912822 | ID=MsG0780036498.01.T01:cds;Parent=MsG0780036498.01.T01 |
Chr7 | CDS | 8912606 | 8912757 | 8912606 | ID=MsG0780036498.01.T01:cds;Parent=MsG0780036498.01.T01 |
Chr7 | CDS | 8912114 | 8912393 | 8912114 | ID=MsG0780036498.01.T01:cds;Parent=MsG0780036498.01.T01 |
Gene Sequence |
Protein sequence |