AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680031872.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031872.01.T01 MTR_6g034190 75.188 133 32 1 26 157 1 133 1.29e-61 201
MsG0680031872.01.T01 MTR_6g034190 88.636 44 5 0 164 207 339 382 6.05e-18 82.4
MsG0680031872.01.T01 MTR_2g072240 48.305 118 61 0 39 156 7 124 5.18e-29 113
MsG0680031872.01.T01 MTR_2g071700 51.695 118 47 2 43 156 19 130 2.64e-26 104
MsG0680031872.01.T01 MTR_2g070780 48.413 126 48 3 37 156 12 126 5.97e-26 103
MsG0680031872.01.T01 MTR_0743s0010 43.333 60 34 0 39 98 12 71 3.69e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 40 sgRNAs with CRISPR-Local

Find 357 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCCTTGCACGGCGAGTTAT+TGG 0.219472 6:+28757705 None:intergenic
TGGGAAGTATATTAACAATT+TGG 0.225328 6:-28755366 MsG0680031872.01.T01:CDS
AAGCTGTAATATTCGACATT+TGG 0.278791 6:-28757230 MsG0680031872.01.T01:CDS
TAGTCGATGGCAAGACTTAA+TGG 0.284727 6:+28755283 None:intergenic
AATGCTTCAATATTTGTCTT+TGG 0.298181 6:+28757757 None:intergenic
TAATTGAATGGTTTATCATA+TGG 0.330228 6:-28755202 MsG0680031872.01.T01:CDS
AGCTGTAATATTCGACATTT+GGG 0.343909 6:-28757229 MsG0680031872.01.T01:intron
TCCAACTTTGCATTATCTTC+AGG 0.361121 6:+28757316 None:intergenic
ATATTATGTGTTTAATTGAA+TGG 0.362997 6:-28755214 MsG0680031872.01.T01:CDS
TTTGTCTTTGGTCAAAACTA+AGG 0.374750 6:+28757769 None:intergenic
ACATCCCGCTCGTCAGCTAA+TGG 0.375113 6:+28760021 None:intergenic
TGTCCTCTGACACGTTTGAC+TGG 0.427925 6:-28760051 MsG0680031872.01.T01:CDS
ATCAACAATCAGGTGTGCTT+GGG 0.450105 6:-28755248 MsG0680031872.01.T01:CDS
AATCAACAATCAGGTGTGCT+TGG 0.450776 6:-28755249 MsG0680031872.01.T01:CDS
AAATCTACAAATCAACAATC+AGG 0.458919 6:-28755258 MsG0680031872.01.T01:CDS
TCCTGAAGATAATGCAAAGT+TGG 0.467525 6:-28757317 MsG0680031872.01.T01:CDS
ATAAAAGTTAGAAGTACATC+AGG 0.475341 6:+28757876 None:intergenic
TGTCAGAGGACAAATGTTCA+TGG 0.477789 6:+28760062 None:intergenic
GGTTTATCATATGGTTATTG+TGG 0.486200 6:-28755193 MsG0680031872.01.T01:CDS
CTAGTGTGCTTTCCAATCGT+TGG 0.489038 6:-28757818 MsG0680031872.01.T01:CDS
TGCACGGCGAGTTATTGGTT+CGG 0.493921 6:+28757710 None:intergenic
CGTGCAAGGGATGTTCGTCC+AGG 0.513139 6:-28757693 MsG0680031872.01.T01:intron
AACCAATAACTCGCCGTGCA+AGG 0.516433 6:-28757707 MsG0680031872.01.T01:CDS
ACCAATAACTCGCCGTGCAA+GGG 0.518356 6:-28757706 MsG0680031872.01.T01:CDS
CAATCATAGATAAACACATT+GGG 0.525328 6:-28757261 MsG0680031872.01.T01:CDS
GGGACGCTGTGGTTCAAACA+TGG 0.527420 6:-28755386 MsG0680031872.01.T01:CDS
TTTAATGTGATATAGATTCG+TGG 0.529319 6:-28757345 MsG0680031872.01.T01:intron
TGAAGTCTAAGTCGAGGCAA+AGG 0.541205 6:+28755339 None:intergenic
CCAATCGTTGGAAAACATTG+TGG 0.560442 6:-28757806 MsG0680031872.01.T01:CDS
TATTCCATTAGCTGACGAGC+GGG 0.569445 6:-28760025 MsG0680031872.01.T01:CDS
CTAATAAGTGCGAGCTATGG+CGG 0.572467 6:-28757956 MsG0680031872.01.T01:CDS
GAAGTCTAAGTCGAGGCAAA+GGG 0.581023 6:+28755340 None:intergenic
CTGGACGAACATCCCTTGCA+CGG 0.600524 6:+28757694 None:intergenic
TCAATCATAGATAAACACAT+TGG 0.600536 6:-28757262 MsG0680031872.01.T01:CDS
AGTCTAATAAGTGCGAGCTA+TGG 0.601363 6:-28757959 MsG0680031872.01.T01:CDS
TTGCCAGTCAAACGTGTCAG+AGG 0.621480 6:+28760048 None:intergenic
GGACGCTGTGGTTCAAACAT+GGG 0.627909 6:-28755385 MsG0680031872.01.T01:CDS
TATGATTGACATGATTAACA+TGG 0.651938 6:+28757276 None:intergenic
ATATTCCATTAGCTGACGAG+CGG 0.675435 6:-28760026 MsG0680031872.01.T01:CDS
TATTTGTGAAGTCTAAGTCG+AGG 0.676288 6:+28755333 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATTATTATTTTATTATT+AGG + Chr6:28757012-28757031 None:intergenic 0.0%
!! AAAATATGATGTATTATATA+AGG + Chr6:28756348-28756367 None:intergenic 10.0%
!! AAATATGATGTATTATATAA+GGG + Chr6:28756347-28756366 None:intergenic 10.0%
!! TCAATAATAGATTAATTAAA+TGG - Chr6:28757774-28757793 MsG0680031872.01.T01:CDS 10.0%
!!! AAACTAAGTTATATTATTTT+CGG - Chr6:28758143-28758162 MsG0680031872.01.T01:intron 10.0%
!!! ATAGAAATATTTAGTTTTAT+GGG + Chr6:28756770-28756789 None:intergenic 10.0%
!!! GTATTATTTATAATTTGTTA+AGG + Chr6:28758883-28758902 None:intergenic 10.0%
!!! TATAGAAATATTTAGTTTTA+TGG + Chr6:28756771-28756790 None:intergenic 10.0%
!!! TCTCAAATATTTTAAAAATT+TGG - Chr6:28758410-28758429 MsG0680031872.01.T01:intron 10.0%
!!! TTTTTGAATATTAATCTATT+GGG + Chr6:28759357-28759376 None:intergenic 10.0%
! GGGGGGGGGGGGGGGGGGGC+TGG + Chr6:28755500-28755519 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + Chr6:28755501-28755520 None:intergenic 100.0%
!! AAAAAAATAATTTATGGTAG+GGG + Chr6:28756799-28756818 None:intergenic 15.0%
!! ATATTATGTGTTTAATTGAA+TGG - Chr6:28760033-28760052 MsG0680031872.01.T01:CDS 15.0%
!! CAAAAAAATAATTTATGGTA+GGG + Chr6:28756800-28756819 None:intergenic 15.0%
!! GTCACTAATATTAAAAATAT+TGG + Chr6:28756509-28756528 None:intergenic 15.0%
!! TAAAAATCTTAAACAAGTTA+AGG - Chr6:28756959-28756978 MsG0680031872.01.T01:intron 15.0%
!!! AAAATTGCAATTATTTTGTT+TGG + Chr6:28756082-28756101 None:intergenic 15.0%
!!! AACTAAGTTATATTATTTTC+GGG - Chr6:28758144-28758163 MsG0680031872.01.T01:intron 15.0%
!!! AATTTTTGCTCTATTTTATT+TGG - Chr6:28756122-28756141 MsG0680031872.01.T01:intron 15.0%
!!! AGAAATTGATGTTATTTTTT+TGG + Chr6:28756555-28756574 None:intergenic 15.0%
!!! ATTTTTGCTCTATTTTATTT+GGG - Chr6:28756123-28756142 MsG0680031872.01.T01:intron 15.0%
!!! CATATTTCTTTAATTTTTCA+GGG - Chr6:28759841-28759860 MsG0680031872.01.T01:intron 15.0%
!!! CTATCAAATAAATGTTTTTT+AGG - Chr6:28756395-28756414 MsG0680031872.01.T01:intron 15.0%
!!! CTTGTTTAAGATTTTTATTA+CGG + Chr6:28756956-28756975 None:intergenic 15.0%
!!! CTTTTTGAATATTAATCTAT+TGG + Chr6:28759358-28759377 None:intergenic 15.0%
!!! GAAATTGATGTTATTTTTTT+GGG + Chr6:28756554-28756573 None:intergenic 15.0%
!!! GATTTATGATTTGATTTTTT+GGG - Chr6:28757679-28757698 MsG0680031872.01.T01:intron 15.0%
!!! TAGAAATATTTAGTTTTATG+GGG + Chr6:28756769-28756788 None:intergenic 15.0%
!!! TAGTTTTTCAAAATAATCAT+GGG + Chr6:28758129-28758148 None:intergenic 15.0%
!!! TATTTGATTGGTTTTTAAAA+AGG + Chr6:28756008-28756027 None:intergenic 15.0%
!!! TCATATTTCTTTAATTTTTC+AGG - Chr6:28759840-28759859 MsG0680031872.01.T01:intron 15.0%
!!! TGATTTATGATTTGATTTTT+TGG - Chr6:28757678-28757697 MsG0680031872.01.T01:intron 15.0%
!!! TTAGTTTTTCAAAATAATCA+TGG + Chr6:28758130-28758149 None:intergenic 15.0%
!! AAAAAAATTAACGAGAACTT+TGG - Chr6:28756240-28756259 MsG0680031872.01.T01:intron 20.0%
!! AAAAAATAATTTATGGTAGG+GGG + Chr6:28756798-28756817 None:intergenic 20.0%
!! AAAAATTATTACTATTCGGT+AGG + Chr6:28759081-28759100 None:intergenic 20.0%
!! AAAATTATTACTATTCGGTA+GGG + Chr6:28759080-28759099 None:intergenic 20.0%
!! AAATAAGCTTATGATGAATT+TGG - Chr6:28756023-28756042 MsG0680031872.01.T01:intron 20.0%
!! AAATACCAACCATATAATTA+GGG + Chr6:28758971-28758990 None:intergenic 20.0%
!! AAGAAAATTGAAACAAAATC+TGG + Chr6:28757850-28757869 None:intergenic 20.0%
!! AATAAAGTAACAAAACTAGT+TGG - Chr6:28755366-28755385 MsG0680031872.01.T01:CDS 20.0%
!! AATAATGATGAAATTTACCA+TGG - Chr6:28757118-28757137 MsG0680031872.01.T01:intron 20.0%
!! AATTAATATTACAAGGCATA+GGG + Chr6:28755445-28755464 None:intergenic 20.0%
!! ACAAAATTATCTCAATTTCT+TGG - Chr6:28756470-28756489 MsG0680031872.01.T01:intron 20.0%
!! ATAATGATGAAATTTACCAT+GGG - Chr6:28757119-28757138 MsG0680031872.01.T01:intron 20.0%
!! ATAATGATGTTAAAAAGCTT+GGG - Chr6:28758556-28758575 MsG0680031872.01.T01:intron 20.0%
!! ATAGAAATCTTTGTGATATA+TGG - Chr6:28756636-28756655 MsG0680031872.01.T01:intron 20.0%
!! ATCTTTATGAATAGAAATGA+TGG + Chr6:28758496-28758515 None:intergenic 20.0%
!! ATGAAGAAATTAATGAGAAA+GGG - Chr6:28758075-28758094 MsG0680031872.01.T01:intron 20.0%
!! CATATCACCTATATTTAATT+TGG - Chr6:28758642-28758661 MsG0680031872.01.T01:intron 20.0%
!! CCAAAAAAATAATTTATGGT+AGG + Chr6:28756801-28756820 None:intergenic 20.0%
!! CTGATAAAAAAGTCATAAAT+TGG + Chr6:28755679-28755698 None:intergenic 20.0%
!! GAATCTATATCACATTAAAA+AGG + Chr6:28757901-28757920 None:intergenic 20.0%
!! TAAAAATTAGAGTTACATCT+AGG + Chr6:28759019-28759038 None:intergenic 20.0%
!! TAAATACCAACCATATAATT+AGG + Chr6:28758972-28758991 None:intergenic 20.0%
!! TAATATTCAAAAAGAGTTGA+AGG - Chr6:28759364-28759383 MsG0680031872.01.T01:intron 20.0%
!! TAATTAATATTACAAGGCAT+AGG + Chr6:28755446-28755465 None:intergenic 20.0%
!! TAATTGAATGGTTTATCATA+TGG - Chr6:28760045-28760064 MsG0680031872.01.T01:CDS 20.0%
!! TAGAAAATCACAAATACAAA+TGG - Chr6:28755615-28755634 MsG0680031872.01.T01:intron 20.0%
!! TAGAAATCTTTGTGATATAT+GGG - Chr6:28756637-28756656 MsG0680031872.01.T01:intron 20.0%
!! TATAATGATGTTAAAAAGCT+TGG - Chr6:28758555-28758574 MsG0680031872.01.T01:intron 20.0%
!! TCTAAGAGGAATAATATATT+CGG + Chr6:28756987-28757006 None:intergenic 20.0%
!! TGAGTCTAATTAATATTACA+AGG + Chr6:28755452-28755471 None:intergenic 20.0%
!!! AAAAACAACCAATTTTTTAC+AGG - Chr6:28756603-28756622 MsG0680031872.01.T01:intron 20.0%
!!! AAAACAACCAATTTTTTACA+GGG - Chr6:28756604-28756623 MsG0680031872.01.T01:intron 20.0%
!!! AGATGTAACTCTAATTTTTA+CGG - Chr6:28759019-28759038 MsG0680031872.01.T01:intron 20.0%
!!! ATCTACGAATTTTATCTTAT+AGG - Chr6:28757598-28757617 MsG0680031872.01.T01:intron 20.0%
!!! ATTTATTTGATAGTGTTAAG+CGG + Chr6:28756388-28756407 None:intergenic 20.0%
!!! ATTTTATTTGGGTTTTGATT+AGG - Chr6:28756134-28756153 MsG0680031872.01.T01:intron 20.0%
!!! CATATTTTTTGAGATTCATT+TGG - Chr6:28757800-28757819 MsG0680031872.01.T01:CDS 20.0%
!!! CCTACCATAAATTATTTTTT+TGG - Chr6:28756798-28756817 MsG0680031872.01.T01:intron 20.0%
!!! GAATTTTATCTTATAGGTTT+AGG - Chr6:28757604-28757623 MsG0680031872.01.T01:intron 20.0%
!!! TATGACTTTTTTATCAGTTA+AGG - Chr6:28755682-28755701 MsG0680031872.01.T01:intron 20.0%
!!! TTTTAACATCATTATAAGCA+CGG + Chr6:28758551-28758570 None:intergenic 20.0%
!!! TTTTTACGTATTGATGATTA+AGG - Chr6:28757160-28757179 MsG0680031872.01.T01:intron 20.0%
! AAATCTACAAATCAACAATC+AGG - Chr6:28759989-28760008 MsG0680031872.01.T01:intron 25.0%
! AATACCAACCATATAATTAG+GGG + Chr6:28758970-28758989 None:intergenic 25.0%
! AATGCTTCAATATTTGTCTT+TGG + Chr6:28757493-28757512 None:intergenic 25.0%
! ACATTAGGAATTGAAGTTAA+TGG - Chr6:28756273-28756292 MsG0680031872.01.T01:intron 25.0%
! AGAAATCTTTGTGATATATG+GGG - Chr6:28756638-28756657 MsG0680031872.01.T01:intron 25.0%
! CAATCATAGATAAACACATT+GGG - Chr6:28757986-28758005 MsG0680031872.01.T01:intron 25.0%
! CAGAGAATCACATTTATTAA+GGG + Chr6:28758362-28758381 None:intergenic 25.0%
! GAAACCACAATTCAAAATAA+TGG + Chr6:28758712-28758731 None:intergenic 25.0%
! GAATATTAATCTATTGGGTT+CGG + Chr6:28759352-28759371 None:intergenic 25.0%
! GATGAAGAAATTAATGAGAA+AGG - Chr6:28758074-28758093 MsG0680031872.01.T01:intron 25.0%
! GGGACCAAAAAAATAATTTA+TGG + Chr6:28756805-28756824 None:intergenic 25.0%
! GGGGAAAAATTATTACTATT+CGG + Chr6:28759085-28759104 None:intergenic 25.0%
! TACAAGCCATTAAATTAATC+TGG - Chr6:28757733-28757752 MsG0680031872.01.T01:CDS 25.0%
! TATGATTGACATGATTAACA+TGG + Chr6:28757974-28757993 None:intergenic 25.0%
! TATTAGTGACGCATATTATT+AGG - Chr6:28756519-28756538 MsG0680031872.01.T01:intron 25.0%
! TCAATCATAGATAAACACAT+TGG - Chr6:28757985-28758004 MsG0680031872.01.T01:intron 25.0%
! TCATCATAAGCTTATTTGAT+TGG + Chr6:28756020-28756039 None:intergenic 25.0%
! TGAAGAAATTAATGAGAAAG+GGG - Chr6:28758076-28758095 MsG0680031872.01.T01:intron 25.0%
! TGATAAGTAAACTTAATTCG+TGG + Chr6:28755882-28755901 None:intergenic 25.0%
! TGCAATAATTATTGAAACGA+GGG + Chr6:28757267-28757286 None:intergenic 25.0%
! TTGCAATAATTATTGAAACG+AGG + Chr6:28757268-28757287 None:intergenic 25.0%
! TTTAATGTGATATAGATTCG+TGG - Chr6:28757902-28757921 MsG0680031872.01.T01:CDS 25.0%
! TTTATTATTAGGTCTCTAAG+AGG + Chr6:28757001-28757020 None:intergenic 25.0%
! TTTCGAAAGTTCAGAATATT+TGG - Chr6:28756099-28756118 MsG0680031872.01.T01:intron 25.0%
!! ATAAAAGTTAGAAGTACATC+AGG + Chr6:28757374-28757393 None:intergenic 25.0%
!! ATGATGATGATGATGATAAT+GGG + Chr6:28755786-28755805 None:intergenic 25.0%
!! CGAATATTACAGCTTTTTAA+AGG + Chr6:28758012-28758031 None:intergenic 25.0%
!! GATTAATTTAATGGCTTGTA+CGG + Chr6:28757733-28757752 None:intergenic 25.0%
!! GTTCTTGAGAAAATCTATTT+TGG - Chr6:28759535-28759554 MsG0680031872.01.T01:intron 25.0%
!! TAATATGTACTTTAGGTTAG+AGG - Chr6:28759460-28759479 MsG0680031872.01.T01:intron 25.0%
!! TGGGAAGTATATTAACAATT+TGG - Chr6:28759881-28759900 MsG0680031872.01.T01:intron 25.0%
!! TTGTATTTGTGATTTTCTAG+TGG + Chr6:28755614-28755633 None:intergenic 25.0%
!! TTTGATTGGATGGAATTTTA+TGG - Chr6:28759228-28759247 MsG0680031872.01.T01:intron 25.0%
!!! AACTTCTCAATTTTGGTTAA+TGG - Chr6:28759323-28759342 MsG0680031872.01.T01:intron 25.0%
!!! ACTACAAACATTTCTAGTAT+TGG + Chr6:28759106-28759125 None:intergenic 25.0%
!!! ATAATGGGTTTGTAAGTTTT+TGG + Chr6:28755771-28755790 None:intergenic 25.0%
!!! CTACAAACATTTCTAGTATT+GGG + Chr6:28759105-28759124 None:intergenic 25.0%
!!! CTATATTTAATTTGGCCAAT+GGG - Chr6:28758650-28758669 MsG0680031872.01.T01:intron 25.0%
!!! GGTTCAATTTTTTTTGTAAG+TGG - Chr6:28759266-28759285 MsG0680031872.01.T01:intron 25.0%
!!! GTTATTTTCTTATATGCCTA+AGG + Chr6:28756325-28756344 None:intergenic 25.0%
!!! TACAAACATTTCTAGTATTG+GGG + Chr6:28759104-28759123 None:intergenic 25.0%
!!! TATTTTGAGTAGATTTTAGC+AGG + Chr6:28755292-28755311 None:intergenic 25.0%
!!! TTTGTAGATTTTTTAGTCGA+TGG + Chr6:28759980-28759999 None:intergenic 25.0%
AAAGAAAAAAATGCGAGCTA+TGG - Chr6:28757321-28757340 MsG0680031872.01.T01:CDS 30.0%
AAGCTGTAATATTCGACATT+TGG - Chr6:28758017-28758036 MsG0680031872.01.T01:intron 30.0%
AATCACATTTATTAAGGGTG+AGG + Chr6:28758357-28758376 None:intergenic 30.0%
ACGCATATTATTAGGAAGAA+AGG - Chr6:28756527-28756546 MsG0680031872.01.T01:intron 30.0%
ACTTCAATTCCTAATGTCTA+AGG + Chr6:28756270-28756289 None:intergenic 30.0%
AGCTGTAATATTCGACATTT+GGG - Chr6:28758018-28758037 MsG0680031872.01.T01:intron 30.0%
AGGGACATTATTGAAATTTG+TGG - Chr6:28758594-28758613 MsG0680031872.01.T01:intron 30.0%
AGTAGACATGCATTATCTAA+TGG - Chr6:28756181-28756200 MsG0680031872.01.T01:intron 30.0%
ATAGATATTTGAGTGACCAA+TGG + Chr6:28759565-28759584 None:intergenic 30.0%
ATATAACAAATCGCACACAA+AGG - Chr6:28756664-28756683 MsG0680031872.01.T01:intron 30.0%
ATATAGTAAAGTTAGCTGCA+AGG + Chr6:28756743-28756762 None:intergenic 30.0%
CAAATACAAATGGTGAATTG+TGG - Chr6:28755625-28755644 MsG0680031872.01.T01:intron 30.0%
CCAGAGAATCACATTTATTA+AGG + Chr6:28758363-28758382 None:intergenic 30.0%
CCATTGGCCAAATTAAATAT+AGG + Chr6:28758652-28758671 None:intergenic 30.0%
CCTTAATAAATGTGATTCTC+TGG - Chr6:28758360-28758379 MsG0680031872.01.T01:intron 30.0%
CGCATATTATTAGGAAGAAA+GGG - Chr6:28756528-28756547 MsG0680031872.01.T01:intron 30.0%
CTCGATCCAGATTAATTTAA+TGG + Chr6:28757742-28757761 None:intergenic 30.0%
CTTTCAACATGTCAATGTTT+GGG - Chr6:28756717-28756736 MsG0680031872.01.T01:intron 30.0%
GACATTATTGAAATTTGTGG+TGG - Chr6:28758597-28758616 MsG0680031872.01.T01:intron 30.0%
GCAATAATTATTGAAACGAG+GGG + Chr6:28757266-28757285 None:intergenic 30.0%
GGTTTATCATATGGTTATTG+TGG - Chr6:28760054-28760073 MsG0680031872.01.T01:CDS 30.0%
GTAAATCAGACATTTGATTG+TGG + Chr6:28755657-28755676 None:intergenic 30.0%
GTATTTCTCCTAGACAAAAA+GGG + Chr6:28758736-28758755 None:intergenic 30.0%
GTTATAGAGAGAAAGAAAAG+AGG - Chr6:28755959-28755978 MsG0680031872.01.T01:intron 30.0%
TAATAAATGTGATTCTCTGG+AGG - Chr6:28758363-28758382 MsG0680031872.01.T01:intron 30.0%
TATAACAAATCGCACACAAA+GGG - Chr6:28756665-28756684 MsG0680031872.01.T01:intron 30.0%
TCATTGATACCATCTATATG+AGG - Chr6:28759741-28759760 MsG0680031872.01.T01:intron 30.0%
TCTAGGAGAAATACCAATAA+GGG - Chr6:28758742-28758761 MsG0680031872.01.T01:intron 30.0%
TCTGGAAATTCGATTCTTTA+TGG + Chr6:28757832-28757851 None:intergenic 30.0%
TGTAATCTGTCAAATGACAA+AGG - Chr6:28757191-28757210 MsG0680031872.01.T01:intron 30.0%
TTCATAAGCTCAATCCAAAT+AGG + Chr6:28758768-28758787 None:intergenic 30.0%
TTTGTCTTTGGTCAAAACTA+AGG + Chr6:28757481-28757500 None:intergenic 30.0%
! AACTTTGGATTTACCTTTTG+AGG - Chr6:28758178-28758197 MsG0680031872.01.T01:intron 30.0%
! ATCAGTTAAGGTATTACTTC+TGG - Chr6:28755694-28755713 MsG0680031872.01.T01:intron 30.0%
! GATGATGATGATGATGATAA+TGG + Chr6:28755787-28755806 None:intergenic 30.0%
! GGTCACTCAAATATCTATTT+TGG - Chr6:28759567-28759586 MsG0680031872.01.T01:intron 30.0%
! GTTAAATTTCTAAGAACCCT+AGG + Chr6:28759789-28759808 None:intergenic 30.0%
! TATGAAAGTGCAAAAGATGT+TGG - Chr6:28758434-28758453 MsG0680031872.01.T01:intron 30.0%
! TTTACATCTAAGATTGTACC+TGG + Chr6:28757575-28757594 None:intergenic 30.0%
!! AATCTATTTTGGAGAACCAT+TGG - Chr6:28759546-28759565 MsG0680031872.01.T01:intron 30.0%
!! AGATTTTAGCAGGAAAAAAG+AGG + Chr6:28755282-28755301 None:intergenic 30.0%
!! AGGTTTAGGATCTATGATTT+TGG - Chr6:28757618-28757637 MsG0680031872.01.T01:intron 30.0%
!! CCTATATTTAATTTGGCCAA+TGG - Chr6:28758649-28758668 MsG0680031872.01.T01:intron 30.0%
!! GGTTACTTGTTGTATAAGTA+GGG - Chr6:28755387-28755406 MsG0680031872.01.T01:CDS 30.0%
!! GTTACTTGTTGTATAAGTAG+GGG - Chr6:28755388-28755407 MsG0680031872.01.T01:CDS 30.0%
!! TGGTTACTTGTTGTATAAGT+AGG - Chr6:28755386-28755405 MsG0680031872.01.T01:CDS 30.0%
!!! CACTCCATTATTTTGAATTG+TGG - Chr6:28758705-28758724 MsG0680031872.01.T01:intron 30.0%
!!! CTGAAGCTTGTTAATGTTTT+TGG + Chr6:28756691-28756710 None:intergenic 30.0%
!!! TGATTTGATTTTTTGGGATC+TGG - Chr6:28757685-28757704 MsG0680031872.01.T01:intron 30.0%
!!! TTTTTGAGATTCATTTGGAG+AGG - Chr6:28757805-28757824 MsG0680031872.01.T01:CDS 30.0%
!!! TTTTTTGTAAGTGGCACAAT+TGG - Chr6:28759275-28759294 MsG0680031872.01.T01:intron 30.0%
AAGAAAATTGTGCAAGCTTG+TGG + Chr6:28755555-28755574 None:intergenic 35.0%
AATAACGAGTTTCCAAGAGT+GGG - Chr6:28759634-28759653 MsG0680031872.01.T01:intron 35.0%
AATACCAATAAGGGCCTATT+TGG - Chr6:28758751-28758770 MsG0680031872.01.T01:intron 35.0%
ACACCAACCCTGTAAAAAAT+TGG + Chr6:28756614-28756633 None:intergenic 35.0%
AGAAAATTGTGCAAGCTTGT+GGG + Chr6:28755554-28755573 None:intergenic 35.0%
AGAAATTAATGAGAAAGGGG+TGG - Chr6:28758079-28758098 MsG0680031872.01.T01:intron 35.0%
AGGAATTGAAGTTAATGGCA+GGG - Chr6:28756278-28756297 MsG0680031872.01.T01:intron 35.0%
ATAGAGAGAAAGAAAAGAGG+AGG - Chr6:28755962-28755981 MsG0680031872.01.T01:intron 35.0%
ATATCTTGGGTTACCAGTAA+AGG - Chr6:28759685-28759704 MsG0680031872.01.T01:intron 35.0%
ATGACCCCTAATTATATGGT+TGG - Chr6:28758963-28758982 MsG0680031872.01.T01:intron 35.0%
ATTATTGAAACGAGGGGTTA+AGG + Chr6:28757260-28757279 None:intergenic 35.0%
ATTCAACACACACTTCATTG+AGG + Chr6:28758288-28758307 None:intergenic 35.0%
CAAACTAGTGAAACCTCAAA+AGG + Chr6:28758194-28758213 None:intergenic 35.0%
CCAAACATTGACATGTTGAA+AGG + Chr6:28756719-28756738 None:intergenic 35.0%
CCAAATGACCCCTAATTATA+TGG - Chr6:28758959-28758978 MsG0680031872.01.T01:intron 35.0%
CCATATAATTAGGGGTCATT+TGG + Chr6:28758962-28758981 None:intergenic 35.0%
CCTTTCAACATGTCAATGTT+TGG - Chr6:28756716-28756735 MsG0680031872.01.T01:intron 35.0%
GGTATTTCTCCTAGACAAAA+AGG + Chr6:28758737-28758756 None:intergenic 35.0%
GTCTAGGAGAAATACCAATA+AGG - Chr6:28758741-28758760 MsG0680031872.01.T01:intron 35.0%
TAACATCATTATAAGCACGG+AGG + Chr6:28758548-28758567 None:intergenic 35.0%
TAGGAATTGAAGTTAATGGC+AGG - Chr6:28756277-28756296 MsG0680031872.01.T01:intron 35.0%
TATTTGTGAAGTCTAAGTCG+AGG + Chr6:28759917-28759936 None:intergenic 35.0%
TCAATTCCTAATGTCTAAGG+TGG + Chr6:28756267-28756286 None:intergenic 35.0%
TCCAACTTTGCATTATCTTC+AGG + Chr6:28757934-28757953 None:intergenic 35.0%
TCCTGAAGATAATGCAAAGT+TGG - Chr6:28757930-28757949 MsG0680031872.01.T01:CDS 35.0%
TCCTTAATCTTGATTGTGGA+GGG - Chr6:28759403-28759422 MsG0680031872.01.T01:intron 35.0%
TGAATCTATCAGGAATGAAG+AGG - Chr6:28759431-28759450 MsG0680031872.01.T01:intron 35.0%
TGGAAACTCGTTATTGACAT+TGG + Chr6:28759629-28759648 None:intergenic 35.0%
TGGGCAATATTTGAGAACAA+GGG - Chr6:28758575-28758594 MsG0680031872.01.T01:intron 35.0%
TGTTTACTCTAAGTGTTCCT+TGG - Chr6:28759129-28759148 MsG0680031872.01.T01:intron 35.0%
TTCAACACACACTTCATTGA+GGG + Chr6:28758287-28758306 None:intergenic 35.0%
TTCACAAGTAATCTGATGAC+AGG + Chr6:28755348-28755367 None:intergenic 35.0%
TTGGGCAATATTTGAGAACA+AGG - Chr6:28758574-28758593 MsG0680031872.01.T01:intron 35.0%
! AATTCCTGATAATGACCCAT+TGG + Chr6:28758668-28758687 None:intergenic 35.0%
! AATTTAATGGCTTGTACGGA+GGG + Chr6:28757729-28757748 None:intergenic 35.0%
! AATTTCTTTTCTGTCAGTCG+AGG - Chr6:28757394-28757413 MsG0680031872.01.T01:intron 35.0%
! ACGGAGGATATAAAGTTTTG+GGG + Chr6:28758532-28758551 None:intergenic 35.0%
! ATGGTTCTCTTTTCCACAAA+AGG - Chr6:28756200-28756219 MsG0680031872.01.T01:intron 35.0%
! ATGTACTTTAGGTTAGAGGT+GGG - Chr6:28759464-28759483 MsG0680031872.01.T01:intron 35.0%
! CACGGAGGATATAAAGTTTT+GGG + Chr6:28758533-28758552 None:intergenic 35.0%
! TAATTTAATGGCTTGTACGG+AGG + Chr6:28757730-28757749 None:intergenic 35.0%
! TAGTCACTTTCCATTAACCA+TGG + Chr6:28756879-28756898 None:intergenic 35.0%
! TAGTGCGAACTTCTCAATTT+TGG - Chr6:28759316-28759335 MsG0680031872.01.T01:intron 35.0%
! TATGTACTTTAGGTTAGAGG+TGG - Chr6:28759463-28759482 MsG0680031872.01.T01:intron 35.0%
! TTATGGATTACATGATGACG+AGG - Chr6:28759245-28759264 MsG0680031872.01.T01:intron 35.0%
! TTCTCTTTTCCACAAAAGGA+TGG - Chr6:28756204-28756223 MsG0680031872.01.T01:intron 35.0%
! TTTGAGGTTTCACTAGTTTG+AGG - Chr6:28758194-28758213 MsG0680031872.01.T01:intron 35.0%
! TTTTCCACAAAAGGATGGAA+CGG - Chr6:28756209-28756228 MsG0680031872.01.T01:intron 35.0%
!!! CAACCAATTTTTTACAGGGT+TGG - Chr6:28756608-28756627 MsG0680031872.01.T01:intron 35.0%
!!! TATTTTTTTGGTCCCTCTAC+CGG - Chr6:28756810-28756829 MsG0680031872.01.T01:intron 35.0%
!!! TTTGGGTTTTGATTAGGTGT+TGG - Chr6:28756140-28756159 MsG0680031872.01.T01:intron 35.0%
AAAATTGTGCAAGCTTGTGG+GGG + Chr6:28755552-28755571 None:intergenic 40.0%
AATCAACAATCAGGTGTGCT+TGG - Chr6:28759998-28760017 MsG0680031872.01.T01:intron 40.0%
ACATCTTGTATTCTAGCCCA+TGG + Chr6:28757138-28757157 None:intergenic 40.0%
ACATTGACATGTTGAAAGGC+TGG + Chr6:28756715-28756734 None:intergenic 40.0%
ACCCTCCACAATCAAGATTA+AGG + Chr6:28759407-28759426 None:intergenic 40.0%
AGAACCAAGCCTCATATAGA+TGG + Chr6:28759753-28759772 None:intergenic 40.0%
AGAGAAAGAAAAGAGGAGGA+GGG - Chr6:28755966-28755985 MsG0680031872.01.T01:intron 40.0%
AGTCTAATAAGTGCGAGCTA+TGG - Chr6:28757288-28757307 MsG0680031872.01.T01:CDS 40.0%
ATATTCCATTAGCTGACGAG+CGG - Chr6:28755221-28755240 MsG0680031872.01.T01:CDS 40.0%
ATCAACAATCAGGTGTGCTT+GGG - Chr6:28759999-28760018 MsG0680031872.01.T01:intron 40.0%
ATCAAGATTAAGGAGCCAGA+AGG + Chr6:28759397-28759416 None:intergenic 40.0%
ATCATGTGCATGCTAAAGGT+AGG + Chr6:28759510-28759529 None:intergenic 40.0%
CAATAACGAGTTTCCAAGAG+TGG - Chr6:28759633-28759652 MsG0680031872.01.T01:intron 40.0%
CAATCCAAATAGGCCCTTAT+TGG + Chr6:28758758-28758777 None:intergenic 40.0%
CATCACATGTTTCTCATCCA+AGG + Chr6:28759149-28759168 None:intergenic 40.0%
CATTGACATGTTGAAAGGCT+GGG + Chr6:28756714-28756733 None:intergenic 40.0%
CCAATCGTTGGAAAACATTG+TGG - Chr6:28757441-28757460 MsG0680031872.01.T01:intron 40.0%
CGATGAGAAACAAGTGATGT+GGG - Chr6:28759201-28759220 MsG0680031872.01.T01:intron 40.0%
CTAGAGTGTGGTCATATCTT+GGG - Chr6:28759672-28759691 MsG0680031872.01.T01:intron 40.0%
CTCCTTAATCTTGATTGTGG+AGG - Chr6:28759402-28759421 MsG0680031872.01.T01:intron 40.0%
CTCTTAGTCAAAAGCTACAC+TGG + Chr6:28757220-28757239 None:intergenic 40.0%
GAAAAAAATGCGAGCTATGG+AGG - Chr6:28757324-28757343 MsG0680031872.01.T01:CDS 40.0%
GAAAATTGTGCAAGCTTGTG+GGG + Chr6:28755553-28755572 None:intergenic 40.0%
GAGCGCGTAATATGTACTTT+AGG - Chr6:28759453-28759472 MsG0680031872.01.T01:intron 40.0%
GAGGGTTGAATGAATCTATC+AGG - Chr6:28759421-28759440 MsG0680031872.01.T01:intron 40.0%
GATACCATCTATATGAGGCT+TGG - Chr6:28759746-28759765 MsG0680031872.01.T01:intron 40.0%
GATGAGAAACAAGTGATGTG+GGG - Chr6:28759202-28759221 MsG0680031872.01.T01:intron 40.0%
GATGAGAAACATGTGATGTG+GGG - Chr6:28759151-28759170 MsG0680031872.01.T01:intron 40.0%
GGATGAGAAACATGTGATGT+GGG - Chr6:28759150-28759169 MsG0680031872.01.T01:intron 40.0%
GTGATGTGGGGTAATTTGAT+TGG - Chr6:28759214-28759233 MsG0680031872.01.T01:intron 40.0%
GTGTATCATGTGCATGCTAA+AGG + Chr6:28759514-28759533 None:intergenic 40.0%
TAATGAGAAAGGGGTGGTAA+AGG - Chr6:28758085-28758104 MsG0680031872.01.T01:intron 40.0%
TAGTCGATGGCAAGACTTAA+TGG + Chr6:28759967-28759986 None:intergenic 40.0%
TCAAAACCTGGTTGAGATCA+AGG + Chr6:28758255-28758274 None:intergenic 40.0%
TGAAATTTGTGGTGGCATTG+TGG - Chr6:28758605-28758624 MsG0680031872.01.T01:intron 40.0%
TGGATGAGAAACATGTGATG+TGG - Chr6:28759149-28759168 MsG0680031872.01.T01:intron 40.0%
TGGCTCCTTAATCTTGATTG+TGG - Chr6:28759399-28759418 MsG0680031872.01.T01:intron 40.0%
TGTGGGGTAATTTGATTGGA+TGG - Chr6:28759218-28759237 MsG0680031872.01.T01:intron 40.0%
TTGGGTATGAGTTGTGTCAA+TGG - Chr6:28758036-28758055 MsG0680031872.01.T01:intron 40.0%
TTTCTCATCGCGTAACCATT+AGG + Chr6:28759191-28759210 None:intergenic 40.0%
TTTGGTCCACCTTAGACATT+AGG - Chr6:28756258-28756277 MsG0680031872.01.T01:intron 40.0%
! ATTTAATGGCTTGTACGGAG+GGG + Chr6:28757728-28757747 None:intergenic 40.0%
! CCACAATGTTTTCCAACGAT+TGG + Chr6:28757444-28757463 None:intergenic 40.0%
! GCACGGAGGATATAAAGTTT+TGG + Chr6:28758534-28758553 None:intergenic 40.0%
! GGGTAAGAGTTTTCAAAACC+TGG + Chr6:28758267-28758286 None:intergenic 40.0%
! TCTACCTTTTGTGTTGCCTA+GGG - Chr6:28759770-28759789 MsG0680031872.01.T01:intron 40.0%
! TCTAGAGTGTGGTCATATCT+TGG - Chr6:28759671-28759690 MsG0680031872.01.T01:intron 40.0%
! TGGTTTCACCCTTTTTGTCT+AGG - Chr6:28758725-28758744 MsG0680031872.01.T01:intron 40.0%
! TTAACCGTTCCATCCTTTTG+TGG + Chr6:28756216-28756235 None:intergenic 40.0%
! TTCTACCTTTTGTGTTGCCT+AGG - Chr6:28759769-28759788 MsG0680031872.01.T01:intron 40.0%
!! AGTTTCTTCACTCTAGAGTG+TGG - Chr6:28759660-28759679 MsG0680031872.01.T01:intron 40.0%
!! ATGGGCTAGAATACAAGATG+TGG - Chr6:28757137-28757156 MsG0680031872.01.T01:intron 40.0%
!! GCAAAAGATGTTGGTTTCTG+CGG - Chr6:28758443-28758462 MsG0680031872.01.T01:intron 40.0%
!!! TTAATTTTTCAGGGACGCTG+TGG - Chr6:28759850-28759869 MsG0680031872.01.T01:intron 40.0%
!!! TTTTTGGGATCTGGTCCTTT+TGG - Chr6:28757694-28757713 MsG0680031872.01.T01:CDS 40.0%
AAATTGTGCAAGCTTGTGGG+GGG + Chr6:28755551-28755570 None:intergenic 45.0%
AACCTGGTTGAGATCAAGGA+AGG + Chr6:28758251-28758270 None:intergenic 45.0%
AGAACCCTAGGCAACACAAA+AGG + Chr6:28759777-28759796 None:intergenic 45.0%
AGTAAAGGCTAACCCTAGGT+TGG - Chr6:28759700-28759719 MsG0680031872.01.T01:intron 45.0%
ATTGAAACGAGGGGTTAAGG+AGG + Chr6:28757257-28757276 None:intergenic 45.0%
CCTAAGGCCTGTAGAACTAT+AGG + Chr6:28756309-28756328 None:intergenic 45.0%
CTAATAAGTGCGAGCTATGG+CGG - Chr6:28757291-28757310 MsG0680031872.01.T01:CDS 45.0%
CTAGTGTGCTTTCCAATCGT+TGG - Chr6:28757429-28757448 MsG0680031872.01.T01:intron 45.0%
GAAGTCTAAGTCGAGGCAAA+GGG + Chr6:28759910-28759929 None:intergenic 45.0%
GAGAGAAAGAAAAGAGGAGG+AGG - Chr6:28755965-28755984 MsG0680031872.01.T01:intron 45.0%
GAGGAGGAGGGAAGAATATT+TGG - Chr6:28755978-28755997 MsG0680031872.01.T01:intron 45.0%
GCGATGAGAAACAAGTGATG+TGG - Chr6:28759200-28759219 MsG0680031872.01.T01:intron 45.0%
GGCCTGTAGAACTATAGGAA+CGG + Chr6:28756304-28756323 None:intergenic 45.0%
GGGGTGGTAAAGGTTTCAAT+TGG - Chr6:28758095-28758114 MsG0680031872.01.T01:intron 45.0%
GTGTCAATGGAGATGTTGTG+CGG - Chr6:28758049-28758068 MsG0680031872.01.T01:intron 45.0%
GTTGAAGGAAGATGACCTTC+TGG - Chr6:28759379-28759398 MsG0680031872.01.T01:intron 45.0%
TACCAGTAAAGGCTAACCCT+AGG - Chr6:28759696-28759715 MsG0680031872.01.T01:intron 45.0%
TATTCCATTAGCTGACGAGC+GGG - Chr6:28755222-28755241 MsG0680031872.01.T01:CDS 45.0%
TGAAGTCTAAGTCGAGGCAA+AGG + Chr6:28759911-28759930 None:intergenic 45.0%
TTGGCCAATGGGTCATTATC+AGG - Chr6:28758661-28758680 MsG0680031872.01.T01:intron 45.0%
! CCTATAGTTCTACAGGCCTT+AGG - Chr6:28756306-28756325 MsG0680031872.01.T01:intron 45.0%
!! AACCTAGGGTTAGCCTTTAC+TGG + Chr6:28759701-28759720 None:intergenic 45.0%
!! AATTTCTTTAATAATAAATT+TGG - Chr6:28756568-28756587 MsG0680031872.01.T01:intron 5.0%
AACCAATAACTCGCCGTGCA+AGG - Chr6:28757540-28757559 MsG0680031872.01.T01:intron 50.0%
AATTGTGCAAGCTTGTGGGG+GGG + Chr6:28755550-28755569 None:intergenic 50.0%
ACCAATAACTCGCCGTGCAA+GGG - Chr6:28757541-28757560 MsG0680031872.01.T01:intron 50.0%
AGGTTAGAGGTGGGTAACTC+AGG - Chr6:28759473-28759492 MsG0680031872.01.T01:intron 50.0%
CACCTTCCTTGATCTCAACC+AGG - Chr6:28758246-28758265 MsG0680031872.01.T01:intron 50.0%
CGGGCAAGATAGACGAACTT+TGG - Chr6:28758163-28758182 MsG0680031872.01.T01:intron 50.0%
GAAGAAACTGCTCCCACTCT+TGG + Chr6:28759649-28759668 None:intergenic 50.0%
GCCAAGTGTGATCCAACCTA+GGG + Chr6:28759715-28759734 None:intergenic 50.0%
GGACGCTGTGGTTCAAACAT+GGG - Chr6:28759862-28759881 MsG0680031872.01.T01:intron 50.0%
GGGTAACTCAGGTCTGTCAA+TGG - Chr6:28759484-28759503 MsG0680031872.01.T01:intron 50.0%
TCAATGGAGATGTTGTGCGG+TGG - Chr6:28758052-28758071 MsG0680031872.01.T01:intron 50.0%
TGCCAAGTGTGATCCAACCT+AGG + Chr6:28759716-28759735 None:intergenic 50.0%
TGTCCTCTGACACGTTTGAC+TGG - Chr6:28755196-28755215 MsG0680031872.01.T01:CDS 50.0%
TTGCCAGTCAAACGTGTCAG+AGG + Chr6:28755202-28755221 None:intergenic 50.0%
! ACCCTAGGTTGGATCACACT+TGG - Chr6:28759711-28759730 MsG0680031872.01.T01:intron 50.0%
! GGCCGTTCCTATAGTTCTAC+AGG - Chr6:28756299-28756318 MsG0680031872.01.T01:intron 50.0%
! GTTGGTTTCTGCGGCTAACA+TGG - Chr6:28758452-28758471 MsG0680031872.01.T01:intron 50.0%
! TGCACGGCGAGTTATTGGTT+CGG + Chr6:28757540-28757559 None:intergenic 50.0%
ACATCCCGCTCGTCAGCTAA+TGG + Chr6:28755229-28755248 None:intergenic 55.0%
ATTGTGCAAGCTTGTGGGGG+GGG + Chr6:28755549-28755568 None:intergenic 55.0%
CCATTAACCATGGTCGCCCT+AGG + Chr6:28756869-28756888 None:intergenic 55.0%
CCTAGGGCGACCATGGTTAA+TGG - Chr6:28756866-28756885 MsG0680031872.01.T01:intron 55.0%
CTGGACGAACATCCCTTGCA+CGG + Chr6:28757556-28757575 None:intergenic 55.0%
GGGACGCTGTGGTTCAAACA+TGG - Chr6:28759861-28759880 MsG0680031872.01.T01:intron 55.0%
TCCCTTGCACGGCGAGTTAT+TGG + Chr6:28757545-28757564 None:intergenic 55.0%
TTTGGTCCCTCTACCGGCAT+GGG - Chr6:28756816-28756835 MsG0680031872.01.T01:intron 55.0%
! TAATGGCTTGTACGGAGGGG+TGG + Chr6:28757725-28757744 None:intergenic 55.0%
! TTTTGGTCCCTCTACCGGCA+TGG - Chr6:28756815-28756834 MsG0680031872.01.T01:intron 55.0%
ACCATGGTCGCCCTAGGCAT+AGG + Chr6:28756863-28756882 None:intergenic 60.0%
AGGCATAGGCCAGGTTGCGA+CGG + Chr6:28756849-28756868 None:intergenic 60.0%
CGCAACCTGGCCTATGCCTA+GGG - Chr6:28756850-28756869 MsG0680031872.01.T01:intron 60.0%
CGTGCAAGGGATGTTCGTCC+AGG - Chr6:28757554-28757573 MsG0680031872.01.T01:intron 60.0%
TCGCAACCTGGCCTATGCCT+AGG - Chr6:28756849-28756868 MsG0680031872.01.T01:intron 60.0%
TTGTGCAAGCTTGTGGGGGG+GGG + Chr6:28755548-28755567 None:intergenic 60.0%
GCCTATGCCTAGGGCGACCA+TGG - Chr6:28756859-28756878 MsG0680031872.01.T01:intron 65.0%
GGAGGGGTGGAGGGACCAAA+AGG + Chr6:28757712-28757731 None:intergenic 65.0%
GGCTTGTACGGAGGGGTGGA+GGG + Chr6:28757721-28757740 None:intergenic 65.0%
GTAGGGCCCATGCCGGTAGA+GGG + Chr6:28756825-28756844 None:intergenic 65.0%
TGTGCAAGCTTGTGGGGGGG+GGG + Chr6:28755547-28755566 None:intergenic 65.0%
! TGGCTTGTACGGAGGGGTGG+AGG + Chr6:28757722-28757741 None:intergenic 65.0%
AGGCCAGGTTGCGACGGCGT+AGG + Chr6:28756843-28756862 None:intergenic 70.0%
CGTAGGGCCCATGCCGGTAG+AGG + Chr6:28756826-28756845 None:intergenic 70.0%
GGCCAGGTTGCGACGGCGTA+GGG + Chr6:28756842-28756861 None:intergenic 70.0%
GGTCGCCCTAGGCATAGGCC+AGG + Chr6:28756858-28756877 None:intergenic 70.0%
GTGCAAGCTTGTGGGGGGGG+GGG + Chr6:28755546-28755565 None:intergenic 70.0%
TGCAAGCTTGTGGGGGGGGG+GGG + Chr6:28755545-28755564 None:intergenic 70.0%
AAGCTTGTGGGGGGGGGGGG+GGG + Chr6:28755542-28755561 None:intergenic 75.0%
CAAGCTTGTGGGGGGGGGGG+GGG + Chr6:28755543-28755562 None:intergenic 75.0%
CGACGGCGTAGGGCCCATGC+CGG + Chr6:28756832-28756851 None:intergenic 75.0%
GCAAGCTTGTGGGGGGGGGG+GGG + Chr6:28755544-28755563 None:intergenic 75.0%
GGCCCTACGCCGTCGCAACC+TGG - Chr6:28756837-28756856 MsG0680031872.01.T01:intron 75.0%
! AGCTTGTGGGGGGGGGGGGG+GGG + Chr6:28755541-28755560 None:intergenic 80.0%
! CTTGTGGGGGGGGGGGGGGG+GGG + Chr6:28755539-28755558 None:intergenic 85.0%
! GCTTGTGGGGGGGGGGGGGG+GGG + Chr6:28755540-28755559 None:intergenic 85.0%
! TTGTGGGGGGGGGGGGGGGG+GGG + Chr6:28755538-28755557 None:intergenic 85.0%
! TGTGGGGGGGGGGGGGGGGG+GGG + Chr6:28755537-28755556 None:intergenic 90.0%
! GTGGGGGGGGGGGGGGGGGG+GGG + Chr6:28755536-28755555 None:intergenic 95.0%
! TGGGGGGGGGGGGGGGGGGG+GGG + Chr6:28755535-28755554 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
Chr6 gene 28755187 28760082 28755187 ID=MsG0680031872.01;Name=MsG0680031872.01
Chr6 mRNA 28755187 28760082 28755187 ID=MsG0680031872.01.T01;Parent=MsG0680031872.01;Name=MsG0680031872.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0|0|0.75|0.33|0.25|4|0|229
Chr6 exon 28760023 28760082 28760023 ID=MsG0680031872.01.T01:exon:14712;Parent=MsG0680031872.01.T01
Chr6 exon 28757694 28757979 28757694 ID=MsG0680031872.01.T01:exon:14711;Parent=MsG0680031872.01.T01
Chr6 exon 28757230 28757352 28757230 ID=MsG0680031872.01.T01:exon:14710;Parent=MsG0680031872.01.T01
Chr6 exon 28755187 28755407 28755187 ID=MsG0680031872.01.T01:exon:14709;Parent=MsG0680031872.01.T01
Chr6 CDS 28760023 28760082 28760023 ID=MsG0680031872.01.T01:cds;Parent=MsG0680031872.01.T01
Chr6 CDS 28757694 28757979 28757694 ID=MsG0680031872.01.T01:cds;Parent=MsG0680031872.01.T01
Chr6 CDS 28757230 28757352 28757230 ID=MsG0680031872.01.T01:cds;Parent=MsG0680031872.01.T01
Chr6 CDS 28755187 28755407 28755187 ID=MsG0680031872.01.T01:cds;Parent=MsG0680031872.01.T01
Gene Sequence

>MsG0680031872.01.T01

ATGAACATTTGTCCTCTGACACGTTTGACTGGCAATATTCCATTAGCTGACGAGCGGGATTCTAATAAGTGCGAGCTATGGCGGAAAGAAAAAAGAAAAAAATGCGAGCTATGGAGGAAGAAGCATATGATCAATAGTCTTCCTGATGTACTTCTAACTTTTATAATTTCTTTTCTGTCAGTCGAGGAAGCTGTGAGAACTAGTGTGCTTTCCAATCGTTGGAAAACATTGTGGAAGTACTCTTTTCACCTTAGTTTTGACCAAAGACAAATATTGAAGCATTTGATCAAAATTGACAATCAAAATTCCGAACCAATAACTCGCCGTGCAAGGGATGTTCGTCCAGATTCGTGGAATTATCCTGAAGATAATGCAAAGTTGGATACAGTTGTTGAAGCGTCCATGTTAATCATGTCAATCATAGATAAACACATTGGGCCTTTAAAAAGCTGTAATATTCGACATTTGGGGACGCTGTGGTTCAAACATGGGAAGTATATTAACAATTTGGTTACCCTTTGCCTCGACTTAGACTTCACAAATATTAGAAATTCAATAGCTCTTTCTTTCGCCATTAAGTCTTGCCATCGACTAAAAAATCTACAAATCAACAATCAGGTGTGCTTGGGAATCTTATTTCATATTATGTGTTTAATTGAATGGTTTATCATATGGTTATTGTGGTCATGA
Protein sequence

>MsG0680031872.01.T01

MNICPLTRLTGNIPLADERDSNKCELWRKEKRKKCELWRKKHMINSLPDVLLTFIISFLSVEEAVRTSVLSNRWKTLWKYSFHLSFDQRQILKHLIKIDNQNSEPITRRARDVRPDSWNYPEDNAKLDTVVEASMLIMSIIDKHIGPLKSCNIRHLGTLWFKHGKYINNLVTLCLDLDFTNIRNSIALSFAIKSCHRLKNLQINNQVCLGILFHIMCLIEWFIIWLLWS*